BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00038770
         (490 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]    90   9e-19
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854...    90   1e-18
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...    89   2e-18
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]    84   4e-18
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]    87   6e-18
emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]    94   1e-17
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]                77   2e-17
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ...    79   3e-17
emb|CAE02382.2| OSJNBb0080H08.8 [Oryza sativa Japonica Group]          79   5e-17
emb|CAN76580.1| hypothetical protein VITISV_025642 [Vitis vinifera]    81   8e-17
emb|CAN64015.1| hypothetical protein VITISV_031523 [Vitis vinifera]    91   2e-16
emb|CAN62437.1| hypothetical protein VITISV_010848 [Vitis vinifera]    90   3e-16
emb|CAH65871.1| OSIGBa0103I21.4 [Oryza sativa Indica Group]            76   3e-16
gb|ABA97585.1| retrotransposon protein, putative, Ty1-copia subc...    74   5e-16
gb|ABI34306.1| Polyprotein, putative [Solanum demissum]                79   1e-15
gb|ABA94371.1| retrotransposon protein, putative, Ty1-copia subc...    78   1e-15
gb|AAU10655.1| polyprotein [Oryza sativa Japonica Group]               72   2e-15
gb|ABA93790.1| retrotransposon protein, putative, Ty1-copia subc...    77   4e-15
gb|AAK13130.1|AC083945_5 Putative gag-pol polyprotein [Oryza sat...    71   4e-15
gb|ABA95606.1| retrotransposon protein, putative, Ty1-copia subc...    79   7e-15

>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score = 90.1 bits (222), Expect(2) = 9e-19
 Identities = 47/127 (37%), Positives = 75/127 (59%)
 Frame = +2

Query: 2   GVKKYVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*N 181
           G KK+VV  FL++ ++D K+V+ QV E Q I HE+  E + L++ F   ++IEKLPP+  
Sbjct: 138 GAKKFVVGRFLDYKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWK 197

Query: 182 EYKTNLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVEGVLSSPNSSQRR 361
           ++K  L+ K+K  ++EDLI+ + IEE +RR +  G    +  K N VE   SS   +   
Sbjct: 198 DFKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSKAKTNNN 257

Query: 362 HSRRMEL 382
             +  +L
Sbjct: 258 KGKGSKL 264



 Score = 28.9 bits (63), Expect(2) = 9e-19
 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +1

Query: 376 GIKAKNVGGF-KKPK--GNCYVCGKPGHFVVEYR 468
           G K    GG  KKPK  G C+ CGK GH  V+ R
Sbjct: 261 GSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCR 294


>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
           vinifera]
          Length = 478

 Score = 89.7 bits (221), Expect(2) = 1e-18
 Identities = 46/113 (40%), Positives = 71/113 (62%)
 Frame = +2

Query: 2   GVKKYVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*N 181
           G KK+VV  FL++ ++D K+V+ QV E Q I HE+  E + L++ F   ++IEKLPP+  
Sbjct: 138 GAKKFVVGRFLDYKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWK 197

Query: 182 EYKTNLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVEGVLSS 340
           ++K  L+ K+K  ++EDLI+ + IEE +RR +  G    +  K N VE   SS
Sbjct: 198 DFKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSS 250



 Score = 28.9 bits (63), Expect(2) = 1e-18
 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +1

Query: 376 GIKAKNVGGF-KKPK--GNCYVCGKPGHFVVEYR 468
           G K    GG  KKPK  G C+ CGK GH  V+ R
Sbjct: 261 GSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCR 294


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score = 89.4 bits (220), Expect(2) = 2e-18
 Identities = 47/127 (37%), Positives = 75/127 (59%)
 Frame = +2

Query: 2   GVKKYVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*N 181
           G KK+VV  FL++ ++D K+V+ QV E Q I HE+  E + L++ F   ++IEKLPP+  
Sbjct: 138 GAKKFVVGRFLDYKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWK 197

Query: 182 EYKTNLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVEGVLSSPNSSQRR 361
           ++K  L+ K+K  ++EDLI+ + IEE +RR +  G    +  K N VE   SS   +   
Sbjct: 198 DFKNCLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGVHTLNEAKANFVEHGQSSKAKTNNN 257

Query: 362 HSRRMEL 382
             +  +L
Sbjct: 258 KGKGSKL 264



 Score = 28.9 bits (63), Expect(2) = 2e-18
 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +1

Query: 376 GIKAKNVGGF-KKPK--GNCYVCGKPGHFVVEYR 468
           G K    GG  KKPK  G C+ CGK GH  V+ R
Sbjct: 261 GSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCR 294


>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score = 84.3 bits (207), Expect(2) = 4e-18
 Identities = 45/120 (37%), Positives = 72/120 (60%)
 Frame = +2

Query: 2   GVKKYVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*N 181
           G+KK++V  FL+F +ID K+V+ QV E Q I HE+  E +  +  F   ++IEKLPP   
Sbjct: 308 GIKKFIVGKFLDFKMIDSKTVISQVQELQVILHEIHSEGMSFSDSFQVAAVIEKLPPLWK 367

Query: 182 EYKTNLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVEGVLSSPNSSQRR 361
           ++K  L+ K+K   LE+LIV + IEE +R+ +  G       K N++E     P ++++R
Sbjct: 368 DFKNYLKHKRKEMNLEELIVRLRIEEDNRKSEKKGN-NSMEAKANVIE---QGPKTNKKR 423



 Score = 32.3 bits (72), Expect(2) = 4e-18
 Identities = 16/27 (59%), Positives = 18/27 (66%)
 Frame = +1

Query: 406 KKPKGNCYVCGKPGHFVVEYRFRSTKE 486
           KK KG CY CGK GH   +Y  R+TKE
Sbjct: 438 KKFKGKCYNCGKTGHKSNDY--RNTKE 462


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score = 87.4 bits (215), Expect(2) = 6e-18
 Identities = 45/127 (35%), Positives = 75/127 (59%)
 Frame = +2

Query: 2   GVKKYVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*N 181
           G KK+VV  FL++ ++D K+V+ QV E Q I HE+  + + L++ F   ++IEKLPP+  
Sbjct: 138 GAKKFVVGRFLDYKMVDSKTVVSQVQELQVILHEIHADGMMLSETFQVAAIIEKLPPAWK 197

Query: 182 EYKTNLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVEGVLSSPNSSQRR 361
           ++K  L+ K+K  ++EDLI+ + IEE +RR +  G    +  + N VE   SS   +   
Sbjct: 198 DFKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTLNEAQANFVEHGQSSKAKTNNN 257

Query: 362 HSRRMEL 382
             +  +L
Sbjct: 258 KGKGSKL 264



 Score = 28.9 bits (63), Expect(2) = 6e-18
 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +1

Query: 376 GIKAKNVGGF-KKPK--GNCYVCGKPGHFVVEYR 468
           G K    GG  KKPK  G C+ CGK GH  V+ R
Sbjct: 261 GSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCR 294


>emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]
          Length = 1096

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 55/150 (36%), Positives = 87/150 (58%)
 Frame = +2

Query: 2   GVKKYVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*N 181
           G  KYV+ NF  F + + K V  Q++++  + ++L  E IKL + F+ G L+E LP S  
Sbjct: 104 GTHKYVIGNFRNFQMTEDKDVSSQIHDYHLLINDLAIEDIKLPEPFMVGYLVETLPESWK 163

Query: 182 EYKTNLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVEGVLSSPNSSQRR 361
           +YK N++ K K  +LED+I+HI IEE +R R N  K KE  +K N+VE   S P ++++R
Sbjct: 164 DYKNNMKHKMKQMSLEDVIIHIRIEEQNRNRDNIEKAKELSSKANVVE-EKSKPKNNRKR 222

Query: 362 HSRRMELRQRTLVDLKNLKEIAMSVESLDT 451
             +     +  LV+ K +  +  S  S+ T
Sbjct: 223 IEKTSS--KANLVETKVITTVISSEVSMVT 250


>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score = 76.6 bits (187), Expect(2) = 2e-17
 Identities = 39/106 (36%), Positives = 62/106 (58%)
 Frame = +2

Query: 8   KKYVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*NEY 187
           +++V+  +  + +I GK +  Q+NE+  +  ++  E IKL   FV   LIEKLP S  +Y
Sbjct: 129 QRFVIAKYYRWEMIKGKDIKIQINEYHKLIEDIKTESIKLPDEFVSELLIEKLPQSWTDY 188

Query: 188 KTNLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVE 325
           K  L+ ++K  +L DLI HI IE+T+R+     K K    K N++E
Sbjct: 189 KQQLKHRQKQMSLSDLITHIIIEDTNRKECAAAKAKALSAKANVIE 234



 Score = 37.7 bits (86), Expect(2) = 2e-17
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +1

Query: 409 KPKGNCYVCGKPGHFVVEYRFRSTKE 486
           K KGNC+VCGKPGH   + R R+  +
Sbjct: 267 KKKGNCFVCGKPGHHAPQCRHRAKND 292


>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score = 78.6 bits (192), Expect(2) = 3e-17
 Identities = 41/123 (33%), Positives = 74/123 (60%)
 Frame = +2

Query: 2   GVKKYVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*N 181
           G + YV++ F ++ ++D +SV++Q +E Q +  EL     +L   FV G +I KLPPS +
Sbjct: 70  GSELYVMEQFYDYKMVDDRSVVEQAHEIQMLVKELENNHCELPDKFVAGGIIAKLPPSWS 129

Query: 182 EYKTNLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVEGVLSSPNSSQRR 361
           ++ T+L+ K++  ++ DLI  + IEE +R + N GK  E  +  NLV+    +P++S   
Sbjct: 130 DFATSLKHKRQEFSVTDLIGSLGIEEKARAKDNRGKKIEGGSSANLVQ--KKNPHASHNN 187

Query: 362 HSR 370
           + +
Sbjct: 188 NKK 190



 Score = 35.4 bits (80), Expect(2) = 3e-17
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
 Frame = +1

Query: 379 IKAKNVGGFKKP-----KGNCYVCGKPGHFVVEYRFRSTKE 486
           +K K    FKK      KG+C+VCGKPGH+  +   R  K+
Sbjct: 195 VKPKATTNFKKKGKGKAKGDCFVCGKPGHWAKDCPERKDKK 235


>emb|CAE02382.2| OSJNBb0080H08.8 [Oryza sativa Japonica Group]
          Length = 1183

 Score = 78.6 bits (192), Expect(2) = 5e-17
 Identities = 39/126 (30%), Positives = 76/126 (60%)
 Frame = +2

Query: 2   GVKKYVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*N 181
           G + YV++ F ++ ++D +SV++Q +E Q +  EL     +L   FV G +I K PPS +
Sbjct: 267 GSELYVMEQFYDYKMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKFPPSWS 326

Query: 182 EYKTNLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVEGVLSSPNSSQRR 361
           ++ T+L+ K++  ++ DLI  + +EE +R + N GK  E  +  NLV+    +P++S   
Sbjct: 327 DFATSLKHKRQEFSVTDLIGSLGVEEKARAKDNRGKNIEGGSSANLVQN--KNPHASHNN 384

Query: 362 HSRRME 379
           + ++++
Sbjct: 385 NKKKVK 390



 Score = 34.7 bits (78), Expect(2) = 5e-17
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +1

Query: 379 IKAKNVGGFKKP-----KGNCYVCGKPGHFVVEYRFRSTKE 486
           +K K    FKK      KG+C+VCGKPGH+      R  K+
Sbjct: 393 VKPKATTNFKKKGKGKAKGDCFVCGKPGHWAKNCPDRKDKK 433


>emb|CAN76580.1| hypothetical protein VITISV_025642 [Vitis vinifera]
          Length = 1046

 Score = 80.9 bits (198), Expect(2) = 8e-17
 Identities = 44/138 (31%), Positives = 75/138 (54%)
 Frame = +2

Query: 8   KKYVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*NEY 187
           +KY + NF  F +++ + V  Q++++  + ++L  E IKL   F+   L+E L  S  + 
Sbjct: 86  QKYAIXNFRNFQMMEDRDVSSQIHDYHLLINDLAIEDIKLPGPFMASYLVETLLKSWKDX 145

Query: 188 KTNLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVEGVLSSPNSSQRRHS 367
             N++ K+K  +LED+I+HI IEE +R R N  K KE  +K N+VE      N+  R+ +
Sbjct: 146 XXNMKHKRKQMSLEDVIIHIRIEEQNRNRDNVEKAKELSSKANVVEEKPKPKNNRSRKQN 205

Query: 368 RRMELRQRTLVDLKNLKE 421
            R +      V    +K+
Sbjct: 206 FRTKPNASNKVQQSTIKK 223



 Score = 31.6 bits (70), Expect(2) = 8e-17
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 409 KPKGNCYVCGKPGHFVVEYRFRSTKE 486
           K +GNC+VCGK  H   + R R   E
Sbjct: 222 KKRGNCFVCGKSRHHAAQCRHRKRTE 247


>emb|CAN64015.1| hypothetical protein VITISV_031523 [Vitis vinifera]
          Length = 272

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 49/140 (35%), Positives = 78/140 (55%)
 Frame = +2

Query: 2   GVKKYVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*N 181
           G +KYV+ NF  F +   + V  Q++ +  + ++L  + IKL + FV G L+E L  S  
Sbjct: 11  GTQKYVIGNFRNFQMTGDRDVSSQIHNYHLLINDLAIKDIKLPEPFVVGYLVETLLESWK 70

Query: 182 EYKTNLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVEGVLSSPNSSQRR 361
           +YK N++ KKK  +LED+I+HI IEE +R + N  K KE  +K N+VE      N+  R+
Sbjct: 71  DYKNNMKHKKKQMSLEDVIIHIRIEEQNRNKDNIEKAKELSSKANVVEEKSKPKNNRSRK 130

Query: 362 HSRRMELRQRTLVDLKNLKE 421
            + R +      V    +K+
Sbjct: 131 QNSRTKSNASNKVQNSTIKK 150


>emb|CAN62437.1| hypothetical protein VITISV_010848 [Vitis vinifera]
          Length = 622

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 43/110 (39%), Positives = 68/110 (61%)
 Frame = +2

Query: 2   GVKKYVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*N 181
           G +KY ++NF  F +   + V  Q++++  + ++L  E IKL + FV G L+E  P S  
Sbjct: 11  GTQKYAIENFKNFQMTXDRDVSSQIHDYHLLINDLAIEDIKLPEPFVAGYLVETFPESWK 70

Query: 182 EYKTNLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVEGV 331
           +YK N++ K+K   LED+I+HI IEE +R R N  K KE  +K N+ +G+
Sbjct: 71  DYKNNMKHKRKQMFLEDVIIHIKIEEQNRNRDNAEKVKELSSKANVYKGI 120


>emb|CAH65871.1| OSIGBa0103I21.4 [Oryza sativa Indica Group]
          Length = 964

 Score = 75.9 bits (185), Expect(2) = 3e-16
 Identities = 39/126 (30%), Positives = 76/126 (60%)
 Frame = +2

Query: 2   GVKKYVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*N 181
           G + YV++ F ++ ++D +SV++Q +E Q +  EL     +L   FV G +I KLP S +
Sbjct: 70  GSELYVMEQFYDYKMVDDRSVVEQAHEIQMLAKELENNNYELPDKFVAGGIIAKLPHSWS 129

Query: 182 EYKTNLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVEGVLSSPNSSQRR 361
           ++ T+L+ K++  ++ DLI  + +EE +R + N GK  E  +  NLV+    +P++S   
Sbjct: 130 DFATSLKHKRQEFSVTDLIGSLGVEEKARAKDNRGKNIEGGSSANLVQ--KKNPHASHNN 187

Query: 362 HSRRME 379
           + ++++
Sbjct: 188 NKKKVK 193



 Score = 34.7 bits (78), Expect(2) = 3e-16
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +1

Query: 379 IKAKNVGGFKKP-----KGNCYVCGKPGHFVVEYRFRSTKE 486
           +K K    FKK      KG+C+VCGKPGH+      R  K+
Sbjct: 196 VKPKATTNFKKKGKGKAKGDCFVCGKPGHWAKNCPDRKDKK 236


>gb|ABA97585.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 401

 Score = 74.3 bits (181), Expect(2) = 5e-16
 Identities = 38/123 (30%), Positives = 72/123 (58%)
 Frame = +2

Query: 2   GVKKYVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*N 181
           G + YV++ F ++ ++D +SV++Q +E Q +  EL      L + FV G +I  +PPS +
Sbjct: 220 GSELYVMEQFYDYKMVDDRSVVEQAHEIQILVKELEKNNCDLPEKFVAGGIIANMPPSWS 279

Query: 182 EYKTNLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVEGVLSSPNSSQRR 361
           ++ T+++ K++  ++ DLI  + IEE +R + N GK  E     NLV+    +P++S   
Sbjct: 280 DFATSVKHKRQAFSVTDLIGSLGIEEKARAKDNRGKNIEEGFSANLVQ--KKNPHASHNN 337

Query: 362 HSR 370
           + +
Sbjct: 338 NQK 340



 Score = 35.4 bits (80), Expect(2) = 5e-16
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
 Frame = +1

Query: 379 IKAKNVGGFKKP-----KGNCYVCGKPGHFVVEYRFRSTKE 486
           +K K    FKK      KG+C+VCGKPGH+  +   R  K+
Sbjct: 345 VKPKATTNFKKKGKGKAKGDCFVCGKPGHWAKDCPERKDKK 385


>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
          Length = 1691

 Score = 78.6 bits (192), Expect(2) = 1e-15
 Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
 Frame = +2

Query: 2   GVKKYVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*N 181
           G KKY    F  F ++D KSV+DQ  +F  I  EL  E +K+    +   +++KLPPS  
Sbjct: 104 GAKKYAASRFFRFQMVDNKSVVDQAQDFIMIVGELRSEEVKIGDNLIVCGIVDKLPPSWK 163

Query: 182 EYKTNLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEH--VTKVNLVEGVLSSPNS 349
           E++  +R K+K  +LE LI+ I +EE +R +    + +E+   TKVNL+    ++P S
Sbjct: 164 EFQKTMRHKQKETSLETLIMKIRMEEEARGQDALLQTEENNITTKVNLITSNNATPES 221



 Score = 30.0 bits (66), Expect(2) = 1e-15
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 415 KGNCYVCGKPGHFVVEYRFR 474
           KG C+VCGK GH     RFR
Sbjct: 260 KGPCFVCGKSGHIARFCRFR 279


>gb|ABA94371.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1239

 Score = 77.8 bits (190), Expect(2) = 1e-15
 Identities = 38/108 (35%), Positives = 68/108 (62%)
 Frame = +2

Query: 2   GVKKYVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*N 181
           G + YV++ F ++ ++D +SV++Q +E Q +T EL     +L   FV G +I KLPPS +
Sbjct: 185 GSELYVMEQFYDYKMVDDRSVVEQAHEIQMLTKELENNNCELPDKFVAGGIIAKLPPSWS 244

Query: 182 EYKTNLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVE 325
           ++ T+L+ K++  ++ DLI  + +EE +R + N GK  E  +  N+V+
Sbjct: 245 DFATSLKHKRQEFSVSDLIGSLGVEEKARAKDNWGKKVEGGSSANMVQ 292



 Score = 30.8 bits (68), Expect(2) = 1e-15
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 5/30 (16%)
 Frame = +1

Query: 379 IKAKNVGGFKKP-----KGNCYVCGKPGHF 453
           +K K    FKK      KG+C+VCGK GH+
Sbjct: 310 VKPKVATNFKKKGKGKAKGDCFVCGKSGHW 339


>gb|AAU10655.1| polyprotein [Oryza sativa Japonica Group]
          Length = 1286

 Score = 72.4 bits (176), Expect(2) = 2e-15
 Identities = 39/119 (32%), Positives = 70/119 (58%)
 Frame = +2

Query: 14  YVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*NEYKT 193
           YV++ F ++ ++D  SV+ Q +E Q +  EL     +L   FV G +I KLPPS  ++ T
Sbjct: 217 YVMEQFYDYKMVDDCSVVGQAHENQMLAKELENNNCELPDKFVAGGIIAKLPPSWTDFAT 276

Query: 194 NLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVEGVLSSPNSSQRRHSR 370
           +L+ K++  ++ DLI  +++EE +R + N GK  E  +  NLV+    +P++S   + +
Sbjct: 277 SLKHKRQEFSVTDLIGSLSVEEKARAQDNRGKKIEGGSSANLVQ--KKNPHASHNNNKK 333



 Score = 35.4 bits (80), Expect(2) = 2e-15
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
 Frame = +1

Query: 379 IKAKNVGGFKKP-----KGNCYVCGKPGHFVVEYRFRSTKE 486
           +K K    FKK      KG+C+VCGKPGH+  +   R  K+
Sbjct: 338 VKPKATTNFKKKGKGKAKGDCFVCGKPGHWAKDCPERKDKK 378


>gb|ABA93790.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1370

 Score = 77.0 bits (188), Expect(2) = 4e-15
 Identities = 40/123 (32%), Positives = 74/123 (60%)
 Frame = +2

Query: 2   GVKKYVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*N 181
           G + YV++ F ++ ++D +SV++Q +E Q +  EL     +L   FV G +I KLPPS  
Sbjct: 220 GSELYVMEQFYDYKMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWT 279

Query: 182 EYKTNLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVEGVLSSPNSSQRR 361
           ++ T+L+ K++  ++ DLI  +++EE +R + N GK  E  +  NLV+    +P++S   
Sbjct: 280 DFATSLKHKRQEFSITDLIGSLSVEEKARAKDNWGKKIEGGSSANLVQ--KKNPHASHNN 337

Query: 362 HSR 370
           + +
Sbjct: 338 NKK 340



 Score = 29.6 bits (65), Expect(2) = 4e-15
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
 Frame = +1

Query: 379 IKAKNVGGFKKP-----KGNCYVCGKPGHF 453
           +K K    FKK      KG C++CGK GH+
Sbjct: 345 VKPKATTNFKKKGKGKTKGGCFMCGKSGHW 374


>gb|AAK13130.1|AC083945_5 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1363

 Score = 71.2 bits (173), Expect(2) = 4e-15
 Identities = 38/112 (33%), Positives = 68/112 (60%)
 Frame = +2

Query: 35  EFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*NEYKTNLRQKKK 214
           +F ++D +SV++Q +E Q +  EL     +L   FV G +I KLPPS +++ T+L+ K++
Sbjct: 266 KFEMVDDRSVVEQAHEIQMLIKELENNHCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQ 325

Query: 215 GKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVEGVLSSPNSSQRRHSR 370
             ++ DLI  + IEE +R + N GK  E  +  NLV+   ++P++S   + +
Sbjct: 326 EFSVTDLIGSLGIEEKARAKDNRGKKIEGGSSANLVQ--KNNPHASHNNNKK 375



 Score = 35.4 bits (80), Expect(2) = 4e-15
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
 Frame = +1

Query: 379 IKAKNVGGFKKP-----KGNCYVCGKPGHFVVEYRFRSTKE 486
           +K K    FKK      KG+C+VCGKPGH+  +   R  K+
Sbjct: 380 VKPKATTNFKKKGKGKAKGDCFVCGKPGHWAKDCPERKDKK 420


>gb|ABA95606.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 999

 Score = 79.3 bits (194), Expect(2) = 7e-15
 Identities = 40/119 (33%), Positives = 72/119 (60%)
 Frame = +2

Query: 14  YVVKNFLEFTIIDGKSVMDQVNEFQNITHELTYERIKLAK*FVGGSLIEKLPPS*NEYKT 193
           YV++ F ++ ++DG+SV++Q +E Q +  EL     +L   FV G +I KLPPS  ++ T
Sbjct: 132 YVMEQFYDYKMVDGRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWTDFAT 191

Query: 194 NLRQKKKGKTLEDLIVHINIEETSRRRKNNGKWKEHVTKVNLVEGVLSSPNSSQRRHSR 370
           +L+ K++  ++ DLI  + +EE +R + N GK  E  +  NLV+    +P++S   + +
Sbjct: 192 SLKHKRQEFSVTDLIGSLGVEEKARAKDNRGKKIEGGSSANLVQ--KKNPHASHNNNKK 248



 Score = 26.6 bits (57), Expect(2) = 7e-15
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
 Frame = +1

Query: 379 IKAKNVGGFKKP-----KGNCYVCGKPGHF 453
           +K K    FKK      KG C+V GK GH+
Sbjct: 253 VKPKATTNFKKKGKGKAKGGCFVYGKSGHW 282