BLASTX nr result
ID: Akebia27_contig00038739
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00038739
(589 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001691031.1| light-harvesting protein of photosystem I [C... 146 4e-33
ref|XP_002948151.1| light-harvesting protein of photosystem I [V... 141 2e-31
tpg|DAA05912.1| TPA_inf: chloroplast light-harvesting complex I ... 134 2e-29
ref|XP_005846780.1| hypothetical protein CHLNCDRAFT_31627 [Chlor... 130 2e-28
ref|XP_005644739.1| chlorophyll a/b-binding protein, partial [Co... 127 3e-27
gb|ABD37884.1| light-harvesting chlorophyll-a/b binding protein ... 124 1e-26
ref|XP_001692548.1| light-harvesting protein of photosystem I [C... 119 8e-25
gb|AAL87738.1|AF244524_1 chlorophyll a/b-binding protein [Chlamy... 119 8e-25
tpg|DAA05900.1| TPA_inf: chloroplast light-harvesting complex I ... 116 4e-24
ref|XP_002950368.1| light harvesting complex a protein [Volvox c... 116 5e-24
ref|XP_002507283.1| chlorophyll a/b-binding protein, chloroplast... 116 5e-24
ref|XP_003079488.1| PSI-associated light-harvesting chlorophyll ... 114 2e-23
ref|XP_007512058.1| light-harvesting protein of photosystem I [B... 113 3e-23
ref|XP_005644735.1| light harvesting complex a protein [Coccomyx... 112 1e-22
ref|XP_001417062.1| chlorophyll a/b binding, maybe photosystem I... 112 1e-22
ref|XP_003055418.1| chlorophyll a/b-binding protein, chloroplast... 110 4e-22
tpg|DAA05941.1| TPA_inf: chloroplast light-harvesting complex I ... 109 6e-22
ref|XP_003059523.1| chlorophyll a/b-binding protein, psi-associa... 108 8e-22
ref|XP_002502229.1| chlorophyll a/b-binding protein, psi-associa... 108 1e-21
tpg|DAA05940.1| TPA_inf: chloroplast light-harvesting complex I ... 108 1e-21
>ref|XP_001691031.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii] gi|158279717|gb|EDP05477.1|
light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
Length = 246
Score = 146 bits (369), Expect = 4e-33
Identities = 88/181 (48%), Positives = 110/181 (60%), Gaps = 1/181 (0%)
Frame = -3
Query: 542 LLGRPVSAKAAHFQRNTARHVVVTARKKPDFTWYPFLPRTQTAP-HLDGSTPGDMGFDPL 366
LL VSA + R T R V+A +P WYP TAP HLDGS GD GFDPL
Sbjct: 4 LLKSRVSAGVSRPSRATVR---VSASTRP--MWYP----GATAPAHLDGSMLGDYGFDPL 54
Query: 365 RLATNKDAFEWFKEGELTNGRWAMLAVVGILWTEFFKVAQPWWDVTNKXXXXXXXXXXXX 186
RL NKD +WF+E ELTNGRWAM AVVGIL+T+ + + W K
Sbjct: 55 RLGVNKDNLKWFREAELTNGRWAMAAVVGILFTDAVGLPKFWTAGAEKYALDNQTLALIE 114
Query: 185 XXVFGAAEGARFKNWQKHGGGESGLLNNVPFDPLGLRSEDMREKEVKNGRLAMVAFLGFA 6
VF EG R++ ++K GE+G L+ PFDP+G++SE+M+ KE+KNGRLAM+AFLGF
Sbjct: 115 VAVFAVLEGKRYEIYKK--TGETGFLSFAPFDPMGMKSEEMKLKELKNGRLAMLAFLGFC 172
Query: 5 S 3
S
Sbjct: 173 S 173
>ref|XP_002948151.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis] gi|300266371|gb|EFJ50558.1|
light-harvesting protein of photosystem I [Volvox
carteri f. nagariensis]
Length = 247
Score = 141 bits (355), Expect = 2e-31
Identities = 82/175 (46%), Positives = 106/175 (60%), Gaps = 1/175 (0%)
Frame = -3
Query: 524 SAKAAHFQRNTARHVVVTARKKPDFTWYPFLPRTQTAP-HLDGSTPGDMGFDPLRLATNK 348
S AA + + A V V+A +P WYP TAP HLDG+ GD GFDPLRL TN
Sbjct: 8 SRVAAGVRPSRATAVRVSASTRP--MWYP----GATAPKHLDGTMLGDYGFDPLRLGTNP 61
Query: 347 DAFEWFKEGELTNGRWAMLAVVGILWTEFFKVAQPWWDVTNKXXXXXXXXXXXXXXVFGA 168
+ +WF+E ELTNGRWAM AV GIL+T+ + + W K VF
Sbjct: 62 EQLKWFREAELTNGRWAMAAVAGILFTDLVGLPKFWLAGAEKYALDTPTLALIEVAVFAV 121
Query: 167 AEGARFKNWQKHGGGESGLLNNVPFDPLGLRSEDMREKEVKNGRLAMVAFLGFAS 3
EG R+ ++K GE+G L+ PFDPLG++SE+M+ KE+KNGRLAM+AF+GF S
Sbjct: 122 LEGKRYDIYKK--TGETGFLSFAPFDPLGMKSEEMKLKELKNGRLAMLAFVGFCS 174
>tpg|DAA05912.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca2 [Acetabularia acetabulum]
Length = 229
Score = 134 bits (337), Expect = 2e-29
Identities = 71/149 (47%), Positives = 89/149 (59%), Gaps = 1/149 (0%)
Frame = -3
Query: 446 WYPFLPRTQTAP-HLDGSTPGDMGFDPLRLATNKDAFEWFKEGELTNGRWAMLAVVGILW 270
WYP T P HLD + PGD GFDPLRL TN + W++E ELTNGRWAM+AV GIL+
Sbjct: 45 WYP----GATPPAHLDSTMPGDYGFDPLRLGTNTELLPWYREAELTNGRWAMMAVAGILF 100
Query: 269 TEFFKVAQPWWDVTNKXXXXXXXXXXXXXXVFGAAEGARFKNWQKHGGGESGLLNNVPFD 90
T+ F + + W K + E RFK W++ G+SG L PFD
Sbjct: 101 TDAFGLPKFWLAGAEKYAIGFAPLVAIEIALMAVLEYQRFKGWKE--TGKSGFLAFFPFD 158
Query: 89 PLGLRSEDMREKEVKNGRLAMVAFLGFAS 3
PL + S++M KE+KNGRLAM+AFLGF S
Sbjct: 159 PLNMASDEMAFKEIKNGRLAMIAFLGFCS 187
>ref|XP_005846780.1| hypothetical protein CHLNCDRAFT_31627 [Chlorella variabilis]
gi|307106432|gb|EFN54678.1| hypothetical protein
CHLNCDRAFT_31627 [Chlorella variabilis]
Length = 246
Score = 130 bits (328), Expect = 2e-28
Identities = 87/193 (45%), Positives = 113/193 (58%), Gaps = 4/193 (2%)
Frame = -3
Query: 569 MASALLQSTLLGRPVSAKAAHFQRNTARHVVVTARKKPDFTWYPFLPRTQTAP-HLDGST 393
MA+A+ ++ L V + A R T VV A +P TWYP T P HLDGS
Sbjct: 1 MAAAM--ASALSARVGVRVA---RPTRASSVVVAAARP--TWYP----GATPPKHLDGSM 49
Query: 392 PGDMGFDPLRLAT-NKDAFEWFKEGELTNGRWAMLAVVGILWTEFFKVAQPWWDVTNKXX 216
GD GFDPLRL + +KD ++++EGELTNGRWAM AV GIL+T+ + PWW+ K
Sbjct: 50 LGDYGFDPLRLGSKDKDVLKYYREGELTNGRWAMAAVAGILFTDLVGLG-PWWEAGAKVE 108
Query: 215 XXXXXXXXXXXXV--FGAAEGARFKNWQKHGGGESGLLNNVPFDPLGLRSEDMREKEVKN 42
+ F EG R K ++K G E+GL PFDPL +RS++ R KE+KN
Sbjct: 109 SSFDLKTLIIVEIVTFAILEGFRAKAYEKTG--ETGLGPFAPFDPLNMRSDETRLKELKN 166
Query: 41 GRLAMVAFLGFAS 3
GRLAM+A LGF+S
Sbjct: 167 GRLAMLAILGFSS 179
>ref|XP_005644739.1| chlorophyll a/b-binding protein, partial [Coccomyxa subellipsoidea
C-169] gi|384246706|gb|EIE20195.1| chlorophyll
a/b-binding protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 203
Score = 127 bits (318), Expect = 3e-27
Identities = 72/150 (48%), Positives = 88/150 (58%), Gaps = 2/150 (1%)
Frame = -3
Query: 446 WYPFLPRTQTAPHLDGSTPGDMGFDPLRLATNKDAFEWFKEGELTNGRWAMLAVVGILWT 267
WYP + +LDGS PGD GFDP+RLA N W EGEL NGR AMLAV GIL
Sbjct: 1 WYP---GAEAPSYLDGSLPGDRGFDPMRLAANPSTLPWLVEGELYNGRVAMLAVAGILLV 57
Query: 266 EFFKVAQPWWDVTNK--XXXXXXXXXXXXXXVFGAAEGARFKNWQKHGGGESGLLNNVPF 93
E + PWW + ++ A E RF N+QK+ GE+GLL VPF
Sbjct: 58 EAAGLG-PWWSAPFRVDWPLPYWPGVVVFHAIYAAFEVKRFDNFQKY--GETGLLGFVPF 114
Query: 92 DPLGLRSEDMREKEVKNGRLAMVAFLGFAS 3
DPL +R + R+ EV+NGRLAM+AF+GFAS
Sbjct: 115 DPLNMRDDYKRQSEVRNGRLAMLAFIGFAS 144
>gb|ABD37884.1| light-harvesting chlorophyll-a/b binding protein Lhca5.2
[Mesostigma viride] gi|145079736|tpg|DAA05927.1|
TPA_inf: chloroplast light-harvesting complex I protein
precursor Lhca9 [Mesostigma viride]
Length = 225
Score = 124 bits (312), Expect = 1e-26
Identities = 70/159 (44%), Positives = 91/159 (57%), Gaps = 3/159 (1%)
Frame = -3
Query: 476 VTARKKPDFTWYPFLPRTQTAPHLDGSTPGDMGFDPLRLATNKDAFEWFKEGELTNGRWA 297
VT R W LP T HL+G+ PGD G+DP+ LAT+ D WF E E TNGRWA
Sbjct: 32 VTVRAADRTLW---LPNTVPPAHLNGTLPGDYGYDPIGLATDPDRLAWFVEAERTNGRWA 88
Query: 296 MLAVVGILWTEFFKV-AQPWWDV--TNKXXXXXXXXXXXXXXVFGAAEGARFKNWQKHGG 126
M V GIL+T+ + + PW+ + + +FG E R + W+K
Sbjct: 89 MAGVAGILFTDALHIGSAPWFSIGAELESPIPLWGLATIEFVIFGFLEMKRLEGWKK--T 146
Query: 125 GESGLLNNVPFDPLGLRSEDMREKEVKNGRLAMVAFLGF 9
G++GLLN PFDPLG+ S++M KEVKNGRLAM A+ GF
Sbjct: 147 GQNGLLNWFPFDPLGMNSKEMMVKEVKNGRLAMFAWCGF 185
>ref|XP_001692548.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii] gi|158278261|gb|EDP04026.1|
light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
Length = 213
Score = 119 bits (297), Expect = 8e-25
Identities = 68/161 (42%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
Frame = -3
Query: 488 RHVVVTARKKPDFTWYPFLPRTQTAPHLDGSTPGDMGFDPLRLATNKDAFEWFKEGELTN 309
+ VV A +P TW LP HL G+ GD GFDPL L ++ +W+ E E TN
Sbjct: 19 QRVVAAASARP--TW---LPGLNPPAHLKGALAGDNGFDPLGLGQDEGRLKWYAEAEKTN 73
Query: 308 GRWAMLAVVGILWTEFFKVAQPWWDV-TNKXXXXXXXXXXXXXXVFGAAEGARFKNWQKH 132
GRWAM+AV GIL E V WW+ + V G E R++ +++
Sbjct: 74 GRWAMMAVAGILGQELLGVTPAWWEAGAKEYDIPAQALTPIEFIVMGFLEIKRYQGFKQ- 132
Query: 131 GGGESGLLNNVPFDPLGLRSEDMREKEVKNGRLAMVAFLGF 9
G SG +N+ PFDP G+ S M KEVKNGRLAMVAF+GF
Sbjct: 133 -TGTSGFINSFPFDPAGMNSPSMATKEVKNGRLAMVAFIGF 172
>gb|AAL87738.1|AF244524_1 chlorophyll a/b-binding protein [Chlamydomonas reinhardtii]
Length = 222
Score = 119 bits (297), Expect = 8e-25
Identities = 68/161 (42%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
Frame = -3
Query: 488 RHVVVTARKKPDFTWYPFLPRTQTAPHLDGSTPGDMGFDPLRLATNKDAFEWFKEGELTN 309
+ VV A +P TW LP HL G+ GD GFDPL L ++ +W+ E E TN
Sbjct: 19 QRVVAAASARP--TW---LPGLNPPAHLKGALAGDNGFDPLGLGQDEGRLKWYAEAEKTN 73
Query: 308 GRWAMLAVVGILWTEFFKVAQPWWDV-TNKXXXXXXXXXXXXXXVFGAAEGARFKNWQKH 132
GRWAM+AV GIL E V WW+ + V G E R++ +++
Sbjct: 74 GRWAMMAVAGILGQELLGVTPAWWEAGAKEYDIPAQALTPIEFIVMGFLEIKRYQGFKQ- 132
Query: 131 GGGESGLLNNVPFDPLGLRSEDMREKEVKNGRLAMVAFLGF 9
G SG +N+ PFDP G+ S M KEVKNGRLAMVAF+GF
Sbjct: 133 -TGTSGFINSFPFDPAGMNSPSMATKEVKNGRLAMVAFIGF 172
>tpg|DAA05900.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca9 [Acetabularia acetabulum]
Length = 192
Score = 116 bits (291), Expect = 4e-24
Identities = 61/136 (44%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Frame = -3
Query: 410 HLDGSTPGDMGFDPLRLATNKDAFEWFKEGELTNGRWAMLAVVGILWTEFFKVAQPWWDV 231
HLDGS GD GFDPL L + D +W+ E E TNGRWAM+AV GIL E V W++
Sbjct: 21 HLDGSLAGDFGFDPLGLGSEPDRLKWYVEAEKTNGRWAMMAVAGILGQELLGVTPKWFEA 80
Query: 230 TNK-XXXXXXXXXXXXXXVFGAAEGARFKNWQKHGGGESGLLNNVPFDPLGLRSEDMREK 54
K + G E R++ ++ G SG LN+ PFDP + S DM+ K
Sbjct: 81 GAKDYGIPFFPLLAMEAIILGFLETKRYQGFKT--TGSSGFLNSFPFDPANMNSPDMQLK 138
Query: 53 EVKNGRLAMVAFLGFA 6
E+KNGRLAM+AF+GF+
Sbjct: 139 EIKNGRLAMIAFVGFS 154
>ref|XP_002950368.1| light harvesting complex a protein [Volvox carteri f. nagariensis]
gi|5902598|gb|AAD55569.1|AF110787_1 light harvesting
complex a protein [Volvox carteri f. nagariensis]
gi|300264373|gb|EFJ48569.1| light harvesting complex a
protein [Volvox carteri f. nagariensis]
Length = 214
Score = 116 bits (290), Expect = 5e-24
Identities = 69/162 (42%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Frame = -3
Query: 488 RHVVVTARKKPDFTWYPFLPRTQTAPHLDGSTPGDMGFDPLRLATNKDAFEWFKEGELTN 309
+ V A +P TW LP HL GS GD GFDPL L ++ +W+ E E TN
Sbjct: 19 QRAVCAATARP--TW---LPGLSPPAHLKGSLAGDSGFDPLGLGQDEGRLKWYAEAEKTN 73
Query: 308 GRWAMLAVVGILWTEFFKVAQPWWDV-TNKXXXXXXXXXXXXXXVFGAAEGARFKNWQKH 132
GRWAM+AV GIL E V W++ + V G E R++ ++
Sbjct: 74 GRWAMMAVTGILGQELLGVTPSWYEAGAKEYDIPSTPLTAIEFIVMGFLEIKRYQGFKT- 132
Query: 131 GGGESGLLNNVPFDPLGLRSEDMREKEVKNGRLAMVAFLGFA 6
G SG +N+ PFDP GL S M KEVKNGRLAMVAF+GFA
Sbjct: 133 -TGTSGFINSFPFDPAGLNSASMATKEVKNGRLAMVAFVGFA 173
>ref|XP_002507283.1| chlorophyll a/b-binding protein, chloroplast precursor [Micromonas
sp. RCC299] gi|226522558|gb|ACO68541.1| chlorophyll
a/b-binding protein, chloroplast precursor [Micromonas
sp. RCC299]
Length = 247
Score = 116 bits (290), Expect = 5e-24
Identities = 66/147 (44%), Positives = 84/147 (57%), Gaps = 2/147 (1%)
Frame = -3
Query: 437 FLPRTQTAPHLDGSTPGDMGFDPLRLATNKDAFEWFKEGELTNGRWAMLAVVGILWTEFF 258
+LP TQ P+LDG+ GD GFDPLRL N D + +E EL NGRWAM A GIL+T+
Sbjct: 38 WLPGTQPPPYLDGTMAGDYGFDPLRLGANPDTLPYLQEAELMNGRWAMHATAGILFTDAV 97
Query: 257 KVAQPWWDVTNKXXXXXXXXXXXXXXVFGAA--EGARFKNWQKHGGGESGLLNNVPFDPL 84
+ + WW+ V A E AR + + G+SG++ N PFDP
Sbjct: 98 GLPK-WWEAGEAALGDWNLQTLVAFQVVIMAFLEAARIRGFMT--TGQSGVIGNFPFDPT 154
Query: 83 GLRSEDMREKEVKNGRLAMVAFLGFAS 3
G S +MR KEVKNGRLAM++FLG S
Sbjct: 155 GQDSPEMRVKEVKNGRLAMMSFLGMVS 181
>ref|XP_003079488.1| PSI-associated light-harvesting chlorophyll a/b binding protein
(IC) [Ostreococcus tauri] gi|63029297|gb|AAY27547.1|
chloroplast light-harvesting complex I protein precursor
Lhca5 [Ostreococcus tauri] gi|116057943|emb|CAL54146.1|
PSI-associated light-harvesting chlorophyll a/b binding
protein (IC) [Ostreococcus tauri]
Length = 212
Score = 114 bits (285), Expect = 2e-23
Identities = 71/176 (40%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Frame = -3
Query: 527 VSAKAAHFQRNTARHVVVTARKKPDFTWYPFLPRTQTAP-HLDGSTPGDMGFDPLRLATN 351
+SA++ + T R VV A WY AP HLDGS GD GFDPL L TN
Sbjct: 8 LSARSIATPKATRRSAVVAAAADRKM-WY--------APAHLDGSIAGDYGFDPLGLGTN 58
Query: 350 KDAFEWFKEGELTNGRWAMLAVVGILWTEFFKVAQPWWDV-TNKXXXXXXXXXXXXXXVF 174
D ++++E EL N RWAM+AV GI+ TE + WW+ T V
Sbjct: 59 PDRLKYYQEAELMNARWAMMAVAGIVGTEVAGIEPRWWEAGTEDYGFPPAALLAIQFPVM 118
Query: 173 GAAEGARFKNWQKHGGGESGLLNNVPFDPLGLRSED--MREKEVKNGRLAMVAFLG 12
G E R + W G SG+ PFDP+G+ S+D M+ KE+KNGR AM+AF+G
Sbjct: 119 GYLENKRIQGWM--ATGSSGVNETFPFDPMGMGSKDANMKLKEIKNGRAAMIAFVG 172
>ref|XP_007512058.1| light-harvesting protein of photosystem I [Bathycoccus prasinos]
gi|424513524|emb|CCO66146.1| light-harvesting protein of
photosystem I [Bathycoccus prasinos]
Length = 212
Score = 113 bits (283), Expect = 3e-23
Identities = 69/150 (46%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
Frame = -3
Query: 446 WYPFLPRTQTAP-HLDGSTPGDMGFDPLRLATNKDAFEWFKEGELTNGRWAMLAVVGILW 270
WYP TAP +LDGS GD GFDPLRL NK++ + +E EL NGRWAM A +G+L
Sbjct: 2 WYP----GATAPDYLDGSMAGDYGFDPLRLGANKESLPYLQEAELMNGRWAMYATIGVLA 57
Query: 269 TEFFKVAQPWWDV-TNKXXXXXXXXXXXXXXVFGAAEGARFKNWQKHGGGESGLLNNVPF 93
T+ +W+ V G E R + + K GESGL N PF
Sbjct: 58 TDSNPSLPKFWEAGAADYDIDFKTLVVTQVIVMGILEALRIRGFMK--TGESGLGANFPF 115
Query: 92 DPLGLRSEDMREKEVKNGRLAMVAFLGFAS 3
DP G+ S R KEVKNGRLAMVAFLG S
Sbjct: 116 DPAGMDSPAARVKEVKNGRLAMVAFLGMVS 145
>ref|XP_005644735.1| light harvesting complex a protein [Coccomyxa subellipsoidea C-169]
gi|384246702|gb|EIE20191.1| light harvesting complex a
protein [Coccomyxa subellipsoidea C-169]
Length = 230
Score = 112 bits (279), Expect = 1e-22
Identities = 62/144 (43%), Positives = 80/144 (55%), Gaps = 1/144 (0%)
Frame = -3
Query: 437 FLPRTQTAPHLDGSTPGDMGFDPLRLATNKDAFEWFKEGELTNGRWAMLAVVGILWTEFF 258
+LP T+ HL G GD GFDPL L + + +W+ E E TNGRWAM V GIL E
Sbjct: 38 WLPDTEPPAHLKGELAGDRGFDPLGLGSEPERLKWYTEAEKTNGRWAMAGVAGILGQELL 97
Query: 257 KVAQPWWDVTNK-XXXXXXXXXXXXXXVFGAAEGARFKNWQKHGGGESGLLNNVPFDPLG 81
V W++ K + G E R++ ++K G+SG L++ PFDP
Sbjct: 98 GVQPKWFEAGAKDYGFPPLALISLEFLLLGFLELKRYQGFKK--TGKSGFLDSFPFDPAN 155
Query: 80 LRSEDMREKEVKNGRLAMVAFLGF 9
L SE EKE+KNGRLAMVAF+GF
Sbjct: 156 LDSEANAEKEIKNGRLAMVAFVGF 179
>ref|XP_001417062.1| chlorophyll a/b binding, maybe photosystem I light harvesting
complex [Ostreococcus lucimarinus CCE9901]
gi|144577288|gb|ABO95355.1| chlorophyll a/b binding,
maybe photosystem I light harvesting complex
[Ostreococcus lucimarinus CCE9901]
Length = 252
Score = 112 bits (279), Expect = 1e-22
Identities = 67/150 (44%), Positives = 81/150 (54%), Gaps = 2/150 (1%)
Frame = -3
Query: 446 WYPFLPRTQTAP-HLDGSTPGDMGFDPLRLATNKDAFEWFKEGELTNGRWAMLAVVGILW 270
WYP AP +LDG+ GD GFDPLRL N + + +E EL NGRWAM A GIL+
Sbjct: 43 WYP----GAVAPKYLDGTMAGDYGFDPLRLGANPETLPYLQEAELMNGRWAMAATAGILF 98
Query: 269 TEFFKVAQPWWDV-TNKXXXXXXXXXXXXXXVFGAAEGARFKNWQKHGGGESGLLNNVPF 93
T+ + + WW+ E AR + + K GESG+LN PF
Sbjct: 99 TDAVGLPK-WWEAGAVDYGMDFQQLVGFQVVAMSILEAARTRGFMK--SGESGVLNAFPF 155
Query: 92 DPLGLRSEDMREKEVKNGRLAMVAFLGFAS 3
DP GL + D R KEVKN RLAMVAFLG S
Sbjct: 156 DPAGLDAPDKRVKEVKNARLAMVAFLGMVS 185
>ref|XP_003055418.1| chlorophyll a/b-binding protein, chloroplast precursor [Micromonas
pusilla CCMP1545] gi|226463392|gb|EEH60670.1|
chlorophyll a/b-binding protein, chloroplast precursor
[Micromonas pusilla CCMP1545]
Length = 254
Score = 110 bits (274), Expect = 4e-22
Identities = 64/154 (41%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Frame = -3
Query: 437 FLPRTQTAPHLDGSTPGDMGFDPLRLATNKDAFEWFKEGELTNGRWAMLAVVGILWTEFF 258
+LP T+ +LDG+ P D GFDPLRL N + + +E EL NGRWAM A GIL+T+
Sbjct: 44 WLPGTEPPSYLDGTMPADYGFDPLRLGANPETLPYLQEAELMNGRWAMHATAGILFTDAV 103
Query: 257 KVAQPW---------WDVTNKXXXXXXXXXXXXXXVFGAAEGARFKNWQKHGGGESGLLN 105
+ + W WD+ V G E AR + + GESG++
Sbjct: 104 GLPKFWEAGEAALGDWDLKT--------LVAIQVVVMGFLEAARIRGFM--ATGESGVVG 153
Query: 104 NVPFDPLGLRSEDMREKEVKNGRLAMVAFLGFAS 3
N PFDP G S M+ KEVKNGRLAM++FLG S
Sbjct: 154 NFPFDPTGQDSPAMKVKEVKNGRLAMMSFLGMVS 187
>tpg|DAA05941.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca2 [Micromonas sp. CCMP490]
Length = 245
Score = 109 bits (272), Expect = 6e-22
Identities = 70/185 (37%), Positives = 96/185 (51%), Gaps = 9/185 (4%)
Frame = -3
Query: 530 PVSAKAAHFQRNTARHVVVTARKKPDFTWYPFLPRTQTAPHLDGSTPGDMGFDPLRLATN 351
PV+ +A+ AR + V A P +LP ++ +LDG+ GD GFDPLRL N
Sbjct: 8 PVALRASVRAPVKARGMSVKAAAGPQH----WLPGSEPPAYLDGTMAGDYGFDPLRLGQN 63
Query: 350 KDAFEWFKEGELTNGRWAMLAVVGILWTEFFKVAQPW---------WDVTNKXXXXXXXX 198
+ + +E EL NGRWAM A GIL+T+ + + W WD+
Sbjct: 64 AETLPYLQEAELMNGRWAMHATAGILFTDAVGLPKFWEAGDAALGDWDLKT--------L 115
Query: 197 XXXXXXVFGAAEGARFKNWQKHGGGESGLLNNVPFDPLGLRSEDMREKEVKNGRLAMVAF 18
V G E AR + + + GESG++ N PFDP G S M+ KE+KNGRLAM++F
Sbjct: 116 VAIQVVVMGFLEAARIRGF--YATGESGVVGNFPFDPSGQDSPAMKVKEIKNGRLAMMSF 173
Query: 17 LGFAS 3
LG S
Sbjct: 174 LGMVS 178
>ref|XP_003059523.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|226459359|gb|EEH56655.1| chlorophyll a/b-binding
protein, psi-associated, chloroplast precursor
[Micromonas pusilla CCMP1545]
Length = 235
Score = 108 bits (271), Expect = 8e-22
Identities = 57/139 (41%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Frame = -3
Query: 425 TQTAPHLDGSTPGDMGFDPLRLATNKDAFEWFKEGELTNGRWAMLAVVGILWTEFFKVAQ 246
T HLDG+ PGD GFDPL L + ++++E EL N RWAM+AV GI TE +
Sbjct: 57 TVAPAHLDGTLPGDFGFDPLGLGADPQRLKYYQEAELMNARWAMMAVAGITATEVLGIGP 116
Query: 245 PWWDV-TNKXXXXXXXXXXXXXXVFGAAEGARFKNWQKHGGGESGLLNNVPFDPLGLRSE 69
W+DV V G E R + W G+SG+++ P+DP+G+ S+
Sbjct: 117 AWYDVGAADFDFPPLALLAIQFPVMGILELKRIRGWL--DTGKSGVVDQFPWDPMGMNSD 174
Query: 68 DMREKEVKNGRLAMVAFLG 12
M KE+KNGRLAM+AF+G
Sbjct: 175 GMAVKEIKNGRLAMIAFVG 193
>ref|XP_002502229.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas sp. RCC299]
gi|226517494|gb|ACO63487.1| chlorophyll a/b-binding
protein, psi-associated, chloroplast precursor
[Micromonas sp. RCC299]
Length = 233
Score = 108 bits (269), Expect = 1e-21
Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 1/139 (0%)
Frame = -3
Query: 425 TQTAPHLDGSTPGDMGFDPLRLATNKDAFEWFKEGELTNGRWAMLAVVGILWTEFFKVAQ 246
T HLDG+ PGD GFDPL L + + ++++E EL N RWAM+AV GI TE +
Sbjct: 58 TVAPAHLDGTLPGDFGFDPLGLGADPERLKYYQEAELMNARWAMMAVAGICTTEILGIGG 117
Query: 245 PWWDV-TNKXXXXXXXXXXXXXXVFGAAEGARFKNWQKHGGGESGLLNNVPFDPLGLRSE 69
PW++ + V G E R + W G+SG+ P+DP+G+ +
Sbjct: 118 PWYEAGAAEYDLPINALLAVQFPVMGILELRRIRGWL--ATGKSGVNETFPWDPMGMNGD 175
Query: 68 DMREKEVKNGRLAMVAFLG 12
M KEVKNGRLAM+AF+G
Sbjct: 176 QMALKEVKNGRLAMIAFVG 194
>tpg|DAA05940.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca9 [Micromonas sp. CCMP490]
Length = 233
Score = 108 bits (269), Expect = 1e-21
Identities = 54/135 (40%), Positives = 78/135 (57%), Gaps = 1/135 (0%)
Frame = -3
Query: 413 PHLDGSTPGDMGFDPLRLATNKDAFEWFKEGELTNGRWAMLAVVGILWTEFFKVAQPWWD 234
PHLDG+ PGD GFDPL L + ++++E EL N RWAM+AV GI T+ + PW++
Sbjct: 62 PHLDGTLPGDFGFDPLGLGADPARLKYYQEAELMNSRWAMMAVAGITTTDALNIGGPWYE 121
Query: 233 V-TNKXXXXXXXXXXXXXXVFGAAEGARFKNWQKHGGGESGLLNNVPFDPLGLRSEDMRE 57
V G E R + W G+SG+ ++ P+DP+G+ ++ M
Sbjct: 122 AGAGDYDFPIPALLAVQFPVMGILELKRIRGWL--ATGKSGVNSDFPWDPMGMNNDAMAV 179
Query: 56 KEVKNGRLAMVAFLG 12
KE+KNGRLAM+AF+G
Sbjct: 180 KEIKNGRLAMIAFVG 194