BLASTX nr result
ID: Akebia27_contig00038700
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00038700
(392 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHA12799.1| hypothetical chloroplast RF21 [Canna indica] gi|5... 85 1e-15
gb|AEZ48749.1| hypothetical chloroplast RF2, partial [Pitcairnia... 86 1e-15
gb|AEZ48745.1| hypothetical chloroplast RF2, partial [Navia saxi... 86 1e-15
gb|AEP33251.1| hypothetical protein [Posidonia oceanica] 69 1e-15
ref|NP_862797.1| Ycf2 [Calycanthus floridus var. glaucus] gi|324... 85 3e-15
gb|AEZ48739.1| hypothetical chloroplast RF2, partial [Fosterella... 84 3e-15
ref|YP_008854638.1| hypothetical chloroplast RF21 [Curcuma rosco... 86 3e-15
ref|YP_004564147.1| hypothetical chloroplast RF2 [Nelumbo nucife... 86 4e-15
gb|AFH01584.1| hypothetical chloroplast RF21 (chloroplast) [Nelu... 86 4e-15
ref|YP_004563911.1| hypothetical chloroplast RF2 [Nelumbo lutea]... 86 4e-15
gb|ADD30886.1| putative RF2 protein [Nelumbo nucifera] 86 4e-15
ref|YP_008081501.1| Ycf2 (chloroplast) [Trochodendron aralioides... 86 4e-15
gb|ADD30885.1| putative RF2 protein [Meliosma aff. cuneifolia Mo... 86 4e-15
gb|AEK71683.1| hypothetical chloroplast RF2 [Trochodendron arali... 86 4e-15
gb|ADD30901.1| putative RF2 protein [Trochodendron aralioides] 86 4e-15
ref|YP_740609.1| hypothetical chloroplast RF2 [Platanus occident... 86 4e-15
ref|YP_008081409.1| Ycf2 (chloroplast) [Tetracentron sinense] gi... 86 4e-15
ref|YP_740245.1| hypothetical chloroplast RF2 [Liriodendron tuli... 85 5e-15
emb|CCW72420.1| ycf2 (chloroplast) [Musa acuminata subsp. malacc... 85 7e-15
gb|ABU85421.1| hypothetical protein RF2 [Musa acuminata] 85 7e-15
>gb|AHA12799.1| hypothetical chloroplast RF21 [Canna indica]
gi|557637218|gb|AHA12817.1| hypothetical chloroplast
RF21 [Canna indica]
Length = 2316
Score = 84.7 bits (208), Expect(2) = 1e-15
Identities = 46/84 (54%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++ G+ +EI + + F RPIE +GFFKQ GAE+TIQSNDIEHVS
Sbjct: 246 NIINLNSGQLFEILGKDLICYLMSAF----REKRPIEGEGFFKQQGAEATIQSNDIEHVS 301
Query: 189 HLFARNTCGISLQNCAQFHM*ILH 118
HLF+RN GISLQNCAQFHM H
Sbjct: 302 HLFSRNNWGISLQNCAQFHMWQFH 325
Score = 23.5 bits (49), Expect(2) = 1e-15
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ FFRNVSREN
Sbjct: 333 GKNQHESDFFRNVSREN 349
Score = 65.1 bits (157), Expect = 1e-08
Identities = 29/44 (65%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Frame = -2
Query: 175 KHVRYFFAKL-CSISYVNFAQFHMWQFHQDLFISWGKNPHESDF 47
+HV + F++ IS N AQFHMWQFHQDLF+SWGKN HESDF
Sbjct: 298 EHVSHLFSRNNWGISLQNCAQFHMWQFHQDLFVSWGKNQHESDF 341
>gb|AEZ48749.1| hypothetical chloroplast RF2, partial [Pitcairnia feliciana]
Length = 2291
Score = 85.5 bits (210), Expect(2) = 1e-15
Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++ G+ +EI + + F RPIE KGFFKQ GAE+TIQSNDIEHVS
Sbjct: 242 NIINLNSGQLFEILGKDLICYLMSAF----REKRPIEGKGFFKQQGAEATIQSNDIEHVS 297
Query: 189 HLFARNTCGISLQNCAQFHM 130
HLF+RN GISLQNCAQFHM
Sbjct: 298 HLFSRNKWGISLQNCAQFHM 317
Score = 22.7 bits (47), Expect(2) = 1e-15
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ + F RNVSREN
Sbjct: 329 GKNQHELDFLRNVSREN 345
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = -2
Query: 175 KHVRYFFAK-LCSISYVNFAQFHMWQFHQDLFISWGKNPHESDFL 44
+HV + F++ IS N AQFHMWQF QDLF+SWGKN HE DFL
Sbjct: 294 EHVSHLFSRNKWGISLQNCAQFHMWQFRQDLFVSWGKNQHELDFL 338
>gb|AEZ48745.1| hypothetical chloroplast RF2, partial [Navia saxicola]
Length = 2291
Score = 85.5 bits (210), Expect(2) = 1e-15
Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++ G+ +EI + + F RPIE KGFFKQ GAE+TIQSNDIEHVS
Sbjct: 242 NIINLNSGQLFEILGKDLICYLMSAF----REKRPIEGKGFFKQQGAEATIQSNDIEHVS 297
Query: 189 HLFARNTCGISLQNCAQFHM 130
HLF+RN GISLQNCAQFHM
Sbjct: 298 HLFSRNKWGISLQNCAQFHM 317
Score = 22.7 bits (47), Expect(2) = 1e-15
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ + F RNVSREN
Sbjct: 329 GKNQHELDFLRNVSREN 345
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = -2
Query: 175 KHVRYFFAK-LCSISYVNFAQFHMWQFHQDLFISWGKNPHESDFL 44
+HV + F++ IS N AQFHMWQF QDLF+SWGKN HE DFL
Sbjct: 294 EHVSHLFSRNKWGISLQNCAQFHMWQFRQDLFVSWGKNQHELDFL 338
>gb|AEP33251.1| hypothetical protein [Posidonia oceanica]
Length = 208
Score = 69.3 bits (168), Expect(2) = 1e-15
Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++ G+ +EI + + F RPIE +GFFKQ GAE+TIQSNDIEHVS
Sbjct: 67 NIINLNSGQLFEILGKHLICYLMSAF----REKRPIEGEGFFKQQGAEATIQSNDIEHVS 122
Query: 189 HLFARNTCGISLQN 148
HLF+RN GISLQN
Sbjct: 123 HLFSRNKWGISLQN 136
Score = 38.9 bits (89), Expect(2) = 1e-15
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -2
Query: 97 HQDLFISWGKNPHESDFL 44
+QDLF+SWGKN HESDFL
Sbjct: 136 NQDLFVSWGKNQHESDFL 153
>ref|NP_862797.1| Ycf2 [Calycanthus floridus var. glaucus]
gi|32480909|ref|NP_862818.1| Ycf2 [Calycanthus floridus
var. glaucus] gi|47117498|sp|Q7Y667.1|YCF2_CALFG
RecName: Full=Protein Ycf2 gi|32399422|emb|CAD28764.1|
Ycf2 protein [Calycanthus floridus var. glaucus]
gi|32399445|emb|CAD28786.1| Ycf2 protein [Calycanthus
floridus var. glaucus]
Length = 2287
Score = 84.7 bits (208), Expect(2) = 3e-15
Identities = 46/80 (57%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++ G+ +EI + + F RPIEV+GFFKQ GAE+TIQSNDIEHVS
Sbjct: 242 NIINLNSGQLFEILVKHLICYLMSAF----REKRPIEVEGFFKQQGAEATIQSNDIEHVS 297
Query: 189 HLFARNTCGISLQNCAQFHM 130
HLF+RN GISLQNCAQFHM
Sbjct: 298 HLFSRNKRGISLQNCAQFHM 317
Score = 22.3 bits (46), Expect(2) = 3e-15
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ + F RNVSREN
Sbjct: 329 GKNRHELDFLRNVSREN 345
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = -2
Query: 175 KHVRYFFAK-LCSISYVNFAQFHMWQFHQDLFISWGKNPHESDFL 44
+HV + F++ IS N AQFHMWQF QDLF+SWGKN HE DFL
Sbjct: 294 EHVSHLFSRNKRGISLQNCAQFHMWQFRQDLFVSWGKNRHELDFL 338
>gb|AEZ48739.1| hypothetical chloroplast RF2, partial [Fosterella caulescens]
Length = 2284
Score = 84.3 bits (207), Expect(2) = 3e-15
Identities = 45/80 (56%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++ G+ +EI + + F RP+E KGFFKQ GAE+TIQSNDIEHVS
Sbjct: 242 NIINLNSGQLFEILGKDLICYLMSAF----REKRPMEGKGFFKQQGAEATIQSNDIEHVS 297
Query: 189 HLFARNTCGISLQNCAQFHM 130
HLF+RN GISLQNCAQFHM
Sbjct: 298 HLFSRNKWGISLQNCAQFHM 317
Score = 22.7 bits (47), Expect(2) = 3e-15
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ + F RNVSREN
Sbjct: 329 GKNQHELDFLRNVSREN 345
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = -2
Query: 175 KHVRYFFAK-LCSISYVNFAQFHMWQFHQDLFISWGKNPHESDFL 44
+HV + F++ IS N AQFHMWQF QDLF+SWGKN HE DFL
Sbjct: 294 EHVSHLFSRNKWGISLQNCAQFHMWQFRQDLFVSWGKNQHELDFL 338
>ref|YP_008854638.1| hypothetical chloroplast RF21 [Curcuma roscoeana]
gi|567853753|ref|YP_008854655.1| hypothetical
chloroplast RF21 [Curcuma roscoeana]
gi|557637545|gb|AHA13140.1| hypothetical chloroplast
RF21 [Curcuma roscoeana] gi|557637563|gb|AHA13158.1|
hypothetical chloroplast RF21 [Curcuma roscoeana]
Length = 2269
Score = 85.9 bits (211), Expect(2) = 3e-15
Identities = 46/80 (57%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++ G+ +EI S+ + F RPIE +GFFKQ GAE+TIQSNDIEHVS
Sbjct: 248 NIINLNSGQLFEILGKDLISYLMSAF----REKRPIEGEGFFKQQGAEATIQSNDIEHVS 303
Query: 189 HLFARNTCGISLQNCAQFHM 130
HLF+RN GISLQNCAQFHM
Sbjct: 304 HLFSRNKWGISLQNCAQFHM 323
Score = 21.2 bits (43), Expect(2) = 3e-15
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ F RNVSREN
Sbjct: 335 GKNEHESDFLRNVSREN 351
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/45 (64%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = -2
Query: 175 KHVRYFFAK-LCSISYVNFAQFHMWQFHQDLFISWGKNPHESDFL 44
+HV + F++ IS N AQFHMWQF QDLF+SWGKN HESDFL
Sbjct: 300 EHVSHLFSRNKWGISLQNCAQFHMWQFRQDLFVSWGKNEHESDFL 344
>ref|YP_004564147.1| hypothetical chloroplast RF2 [Nelumbo nucifera]
gi|334362111|ref|YP_004564164.1| hypothetical
chloroplast RF2 [Nelumbo nucifera]
gi|224474267|gb|ACN49453.1| hypothetical chloroplast RF2
[Nelumbo nucifera] gi|224474284|gb|ACN49470.1|
hypothetical chloroplast RF2 [Nelumbo nucifera]
gi|340807030|gb|AEK71646.1| hypothetical chloroplast RF2
[Nelumbo nucifera] gi|383286841|gb|AFH01491.1|
hypothetical chloroplast RF21 (chloroplast) [Nelumbo
nucifera] gi|383286862|gb|AFH01512.1| hypothetical
chloroplast RF21 (chloroplast) [Nelumbo nucifera]
gi|519666955|gb|AGO98567.1| hypothetical chloroplast
RF21 (chloroplast) [Nelumbo nucifera]
gi|519666972|gb|AGO98584.1| hypothetical chloroplast
RF21 (chloroplast) [Nelumbo nucifera]
Length = 2310
Score = 85.9 bits (211), Expect(2) = 4e-15
Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++ G+ +EI + + F RPIEV+GFFKQ GAESTIQSNDIEHVS
Sbjct: 246 NIINLNSGQLFEILVKHWICYLMSAF----REKRPIEVEGFFKQQGAESTIQSNDIEHVS 301
Query: 189 HLFARNTCGISLQNCAQFHM 130
HLF+RN GISLQNCAQFHM
Sbjct: 302 HLFSRNKWGISLQNCAQFHM 321
Score = 20.8 bits (42), Expect(2) = 4e-15
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ F RNVSREN
Sbjct: 333 GKNPHESDFLRNVSREN 349
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = -2
Query: 175 KHVRYFFAK-LCSISYVNFAQFHMWQFHQDLFISWGKNPHESDFL 44
+HV + F++ IS N AQFHMWQF QDLF+SWGKNPHESDFL
Sbjct: 298 EHVSHLFSRNKWGISLQNCAQFHMWQFRQDLFVSWGKNPHESDFL 342
>gb|AFH01584.1| hypothetical chloroplast RF21 (chloroplast) [Nelumbo lutea]
gi|383286951|gb|AFH01600.1| hypothetical chloroplast
RF21 (chloroplast) [Nelumbo lutea]
Length = 2304
Score = 85.9 bits (211), Expect(2) = 4e-15
Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++ G+ +EI + + F RPIEV+GFFKQ GAESTIQSNDIEHVS
Sbjct: 246 NIINLNSGQLFEILVKHWICYLMSAF----REKRPIEVEGFFKQQGAESTIQSNDIEHVS 301
Query: 189 HLFARNTCGISLQNCAQFHM 130
HLF+RN GISLQNCAQFHM
Sbjct: 302 HLFSRNKWGISLQNCAQFHM 321
Score = 20.8 bits (42), Expect(2) = 4e-15
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ F RNVSREN
Sbjct: 333 GKNPHESDFLRNVSREN 349
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = -2
Query: 175 KHVRYFFAK-LCSISYVNFAQFHMWQFHQDLFISWGKNPHESDFL 44
+HV + F++ IS N AQFHMWQF QDLF+SWGKNPHESDFL
Sbjct: 298 EHVSHLFSRNKWGISLQNCAQFHMWQFRQDLFVSWGKNPHESDFL 342
>ref|YP_004563911.1| hypothetical chloroplast RF2 [Nelumbo lutea]
gi|334362011|ref|YP_004563928.1| hypothetical
chloroplast RF2 [Nelumbo lutea]
gi|224474179|gb|ACN49368.1| hypothetical chloroplast RF2
[Nelumbo lutea] gi|224474196|gb|ACN49385.1| hypothetical
chloroplast RF2 [Nelumbo lutea]
Length = 2304
Score = 85.9 bits (211), Expect(2) = 4e-15
Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++ G+ +EI + + F RPIEV+GFFKQ GAESTIQSNDIEHVS
Sbjct: 246 NIINLNSGQLFEILVKHWICYLMSAF----REKRPIEVEGFFKQQGAESTIQSNDIEHVS 301
Query: 189 HLFARNTCGISLQNCAQFHM 130
HLF+RN GISLQNCAQFHM
Sbjct: 302 HLFSRNKWGISLQNCAQFHM 321
Score = 20.8 bits (42), Expect(2) = 4e-15
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ F RNVSREN
Sbjct: 333 GKNPHESDFLRNVSREN 349
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = -2
Query: 175 KHVRYFFAK-LCSISYVNFAQFHMWQFHQDLFISWGKNPHESDFL 44
+HV + F++ IS N AQFHMWQF QDLF+SWGKNPHESDFL
Sbjct: 298 EHVSHLFSRNKWGISLQNCAQFHMWQFRQDLFVSWGKNPHESDFL 342
>gb|ADD30886.1| putative RF2 protein [Nelumbo nucifera]
Length = 2304
Score = 85.9 bits (211), Expect(2) = 4e-15
Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++ G+ +EI + + F RPIEV+GFFKQ GAESTIQSNDIEHVS
Sbjct: 246 NIINLNSGQLFEILVKHWICYLMSAF----REKRPIEVEGFFKQQGAESTIQSNDIEHVS 301
Query: 189 HLFARNTCGISLQNCAQFHM 130
HLF+RN GISLQNCAQFHM
Sbjct: 302 HLFSRNKWGISLQNCAQFHM 321
Score = 20.8 bits (42), Expect(2) = 4e-15
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ F RNVSREN
Sbjct: 333 GKNPHESDFLRNVSREN 349
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = -2
Query: 175 KHVRYFFAK-LCSISYVNFAQFHMWQFHQDLFISWGKNPHESDFL 44
+HV + F++ IS N AQFHMWQF QDLF+SWGKNPHESDFL
Sbjct: 298 EHVSHLFSRNKWGISLQNCAQFHMWQFRQDLFVSWGKNPHESDFL 342
>ref|YP_008081501.1| Ycf2 (chloroplast) [Trochodendron aralioides]
gi|511348592|ref|YP_008081518.1| Ycf2 (chloroplast)
[Trochodendron aralioides] gi|479279340|gb|AGJ72193.1|
Ycf2 (chloroplast) [Trochodendron aralioides]
gi|479279357|gb|AGJ72210.1| Ycf2 (chloroplast)
[Trochodendron aralioides]
Length = 2298
Score = 85.9 bits (211), Expect(2) = 4e-15
Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++ G+ +EI + + F RPIEV+GFFKQ GAESTIQSNDIEHVS
Sbjct: 251 NIINLNSGQLFEILVKHWICYLMSAF----REKRPIEVEGFFKQQGAESTIQSNDIEHVS 306
Query: 189 HLFARNTCGISLQNCAQFHM 130
HLF+RN GISLQNCAQFHM
Sbjct: 307 HLFSRNKWGISLQNCAQFHM 326
Score = 20.8 bits (42), Expect(2) = 4e-15
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ F RNVSREN
Sbjct: 338 GKNPHESDFLRNVSREN 354
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = -2
Query: 175 KHVRYFFAK-LCSISYVNFAQFHMWQFHQDLFISWGKNPHESDFL 44
+HV + F++ IS N AQFHMWQF QDLF+SWGKNPHESDFL
Sbjct: 303 EHVSHLFSRNKWGISLQNCAQFHMWQFRQDLFVSWGKNPHESDFL 347
>gb|ADD30885.1| putative RF2 protein [Meliosma aff. cuneifolia Moore 333]
gi|340807022|gb|AEK71639.1| hypothetical chloroplast RF2
[Meliosma aff. cuneifolia M. J. Moore 333]
Length = 2298
Score = 85.9 bits (211), Expect(2) = 4e-15
Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++ G+ +EI + + F RPIEV+GFFKQ GAESTIQSNDIEHVS
Sbjct: 244 NIINLNSGQLFEILVKHWICYLMSAF----REKRPIEVEGFFKQQGAESTIQSNDIEHVS 299
Query: 189 HLFARNTCGISLQNCAQFHM 130
HLF+RN GISLQNCAQFHM
Sbjct: 300 HLFSRNKWGISLQNCAQFHM 319
Score = 20.8 bits (42), Expect(2) = 4e-15
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ F RNVSREN
Sbjct: 331 GKNPHESDFLRNVSREN 347
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = -2
Query: 175 KHVRYFFAK-LCSISYVNFAQFHMWQFHQDLFISWGKNPHESDFL 44
+HV + F++ IS N AQFHMWQF QDLF+SWGKNPHESDFL
Sbjct: 296 EHVSHLFSRNKWGISLQNCAQFHMWQFRQDLFVSWGKNPHESDFL 340
>gb|AEK71683.1| hypothetical chloroplast RF2 [Trochodendron aralioides]
Length = 2293
Score = 85.9 bits (211), Expect(2) = 4e-15
Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++ G+ +EI + + F RPIEV+GFFKQ GAESTIQSNDIEHVS
Sbjct: 246 NIINLNSGQLFEILVKHWICYLMSAF----REKRPIEVEGFFKQQGAESTIQSNDIEHVS 301
Query: 189 HLFARNTCGISLQNCAQFHM 130
HLF+RN GISLQNCAQFHM
Sbjct: 302 HLFSRNKWGISLQNCAQFHM 321
Score = 20.8 bits (42), Expect(2) = 4e-15
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ F RNVSREN
Sbjct: 333 GKNPHESDFLRNVSREN 349
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = -2
Query: 175 KHVRYFFAK-LCSISYVNFAQFHMWQFHQDLFISWGKNPHESDFL 44
+HV + F++ IS N AQFHMWQF QDLF+SWGKNPHESDFL
Sbjct: 298 EHVSHLFSRNKWGISLQNCAQFHMWQFRQDLFVSWGKNPHESDFL 342
>gb|ADD30901.1| putative RF2 protein [Trochodendron aralioides]
Length = 2293
Score = 85.9 bits (211), Expect(2) = 4e-15
Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++ G+ +EI + + F RPIEV+GFFKQ GAESTIQSNDIEHVS
Sbjct: 246 NIINLNSGQLFEILVKHWICYLMSAF----REKRPIEVEGFFKQQGAESTIQSNDIEHVS 301
Query: 189 HLFARNTCGISLQNCAQFHM 130
HLF+RN GISLQNCAQFHM
Sbjct: 302 HLFSRNKWGISLQNCAQFHM 321
Score = 20.8 bits (42), Expect(2) = 4e-15
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ F RNVSREN
Sbjct: 333 GKNPHESDFLRNVSREN 349
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = -2
Query: 175 KHVRYFFAK-LCSISYVNFAQFHMWQFHQDLFISWGKNPHESDFL 44
+HV + F++ IS N AQFHMWQF QDLF+SWGKNPHESDFL
Sbjct: 298 EHVSHLFSRNKWGISLQNCAQFHMWQFRQDLFVSWGKNPHESDFL 342
>ref|YP_740609.1| hypothetical chloroplast RF2 [Platanus occidentalis]
gi|114329808|ref|YP_740626.1| hypothetical chloroplast
RF2 [Platanus occidentalis]
gi|122165984|sp|Q09FY5.1|YCF2_PLAOC RecName:
Full=Protein Ycf2 gi|114054429|gb|ABI49823.1|
hypothetical chloroplast RF2 [Platanus occidentalis]
gi|114054446|gb|ABI49840.1| hypothetical chloroplast RF2
[Platanus occidentalis]
Length = 2293
Score = 85.9 bits (211), Expect(2) = 4e-15
Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++ G+ +EI + + F RPIEV+GFFKQ GAESTIQSNDIEHVS
Sbjct: 246 NIINLNSGQLFEILVKHWICYLMSAF----REKRPIEVEGFFKQQGAESTIQSNDIEHVS 301
Query: 189 HLFARNTCGISLQNCAQFHM 130
HLF+RN GISLQNCAQFHM
Sbjct: 302 HLFSRNKWGISLQNCAQFHM 321
Score = 20.8 bits (42), Expect(2) = 4e-15
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ F RNVSREN
Sbjct: 333 GKNPHESDFLRNVSREN 349
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = -2
Query: 175 KHVRYFFAK-LCSISYVNFAQFHMWQFHQDLFISWGKNPHESDFL 44
+HV + F++ IS N AQFHMWQF QDLF+SWGKNPHESDFL
Sbjct: 298 EHVSHLFSRNKWGISLQNCAQFHMWQFRQDLFVSWGKNPHESDFL 342
>ref|YP_008081409.1| Ycf2 (chloroplast) [Tetracentron sinense]
gi|511348499|ref|YP_008081427.1| Ycf2 (chloroplast)
[Tetracentron sinense] gi|479279247|gb|AGJ72101.1| Ycf2
(chloroplast) [Tetracentron sinense]
gi|479279264|gb|AGJ72118.1| Ycf2 (chloroplast)
[Tetracentron sinense]
Length = 2292
Score = 85.9 bits (211), Expect(2) = 4e-15
Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++ G+ +EI + + F RPIEV+GFFKQ GAESTIQSNDIEHVS
Sbjct: 251 NIINLNSGQLFEILVKHWICYLMSAF----REKRPIEVEGFFKQQGAESTIQSNDIEHVS 306
Query: 189 HLFARNTCGISLQNCAQFHM 130
HLF+RN GISLQNCAQFHM
Sbjct: 307 HLFSRNKWGISLQNCAQFHM 326
Score = 20.8 bits (42), Expect(2) = 4e-15
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ F RNVSREN
Sbjct: 338 GKNPHESDFLRNVSREN 354
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = -2
Query: 175 KHVRYFFAK-LCSISYVNFAQFHMWQFHQDLFISWGKNPHESDFL 44
+HV + F++ IS N AQFHMWQF QDLF+SWGKNPHESDFL
Sbjct: 303 EHVSHLFSRNKWGISLQNCAQFHMWQFRQDLFVSWGKNPHESDFL 347
>ref|YP_740245.1| hypothetical chloroplast RF2 [Liriodendron tulipifera]
gi|114107109|ref|YP_740264.1| hypothetical chloroplast
RF2 [Liriodendron tulipifera]
gi|122246286|sp|Q0G9F7.1|YCF2_LIRTU RecName:
Full=Protein Ycf2 gi|113201037|gb|ABI32552.1|
hypothetical chloroplast RF2 [Liriodendron tulipifera]
gi|113201057|gb|ABI32572.1| hypothetical chloroplast RF2
[Liriodendron tulipifera]
Length = 2292
Score = 85.1 bits (209), Expect(2) = 5e-15
Identities = 46/80 (57%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++ G+ +EI + + F RPIEV+GFFKQ GAE+TIQSNDIEHVS
Sbjct: 247 NIINLNSGQLFEILVKHLICYLMSAF----REKRPIEVEGFFKQQGAEATIQSNDIEHVS 302
Query: 189 HLFARNTCGISLQNCAQFHM 130
HLF+RN GISLQNCAQFHM
Sbjct: 303 HLFSRNKWGISLQNCAQFHM 322
Score = 21.2 bits (43), Expect(2) = 5e-15
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ F RNVSREN
Sbjct: 334 GKNQHESDFLRNVSREN 350
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/45 (64%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = -2
Query: 175 KHVRYFFAK-LCSISYVNFAQFHMWQFHQDLFISWGKNPHESDFL 44
+HV + F++ IS N AQFHMWQF QDLF+SWGKN HESDFL
Sbjct: 299 EHVSHLFSRNKWGISLQNCAQFHMWQFRQDLFVSWGKNQHESDFL 343
>emb|CCW72420.1| ycf2 (chloroplast) [Musa acuminata subsp. malaccensis]
gi|525312522|emb|CCW72445.1| ycf2 (chloroplast) [Musa
acuminata subsp. malaccensis]
Length = 2336
Score = 84.7 bits (208), Expect(2) = 7e-15
Identities = 45/80 (56%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++LG+ +EI + + F RPIE +GFFKQ GAE+TIQSNDIEHVS
Sbjct: 262 NIINLNLGQLFEILGKDLICYLMSAF----REKRPIEGEGFFKQQGAEATIQSNDIEHVS 317
Query: 189 HLFARNTCGISLQNCAQFHM 130
HLF+RN GISLQNC QFHM
Sbjct: 318 HLFSRNKWGISLQNCVQFHM 337
Score = 21.2 bits (43), Expect(2) = 7e-15
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ F RNVSREN
Sbjct: 349 GKNQHESDFLRNVSREN 365
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = -2
Query: 175 KHVRYFFAK-LCSISYVNFAQFHMWQFHQDLFISWGKNPHESDFL 44
+HV + F++ IS N QFHMWQF QDLF+SWGKN HESDFL
Sbjct: 314 EHVSHLFSRNKWGISLQNCVQFHMWQFRQDLFVSWGKNQHESDFL 358
>gb|ABU85421.1| hypothetical protein RF2 [Musa acuminata]
Length = 2317
Score = 84.7 bits (208), Expect(2) = 7e-15
Identities = 45/80 (56%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = -3
Query: 366 DIVSISLGRDYEI*NHGRYSFSLQTFPN*KESLRPIEVKGFFKQ-GAESTIQSNDIEHVS 190
+I++++LG+ +EI + + F RPIE +GFFKQ GAE+TIQSNDIEHVS
Sbjct: 262 NIINLNLGQLFEILGKDLICYLMSAF----REKRPIEGEGFFKQQGAEATIQSNDIEHVS 317
Query: 189 HLFARNTCGISLQNCAQFHM 130
HLF+RN GISLQNC QFHM
Sbjct: 318 HLFSRNKWGISLQNCVQFHM 337
Score = 21.2 bits (43), Expect(2) = 7e-15
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 74 GEESARIGFFRNVSREN 24
G+ F RNVSREN
Sbjct: 349 GKNQHESDFLRNVSREN 365
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = -2
Query: 175 KHVRYFFAK-LCSISYVNFAQFHMWQFHQDLFISWGKNPHESDFL 44
+HV + F++ IS N QFHMWQF QDLF+SWGKN HESDFL
Sbjct: 314 EHVSHLFSRNKWGISLQNCVQFHMWQFRQDLFVSWGKNQHESDFL 358