BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00036526
         (562 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containi...   121   1e-25
ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containi...   112   5e-23
emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]   112   5e-23
emb|CBI15839.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002311156.2| hypothetical protein POPTR_0008s05220g [Popu...   110   3e-22
ref|XP_007213206.1| hypothetical protein PRUPE_ppb012387mg [Prun...   109   4e-22
gb|EXB54618.1| hypothetical protein L484_019190 [Morus notabilis]     108   7e-22
ref|XP_004249810.1| PREDICTED: pentatricopeptide repeat-containi...   106   5e-21
ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   105   6e-21
gb|EXC18115.1| hypothetical protein L484_014516 [Morus notabilis]     105   1e-20
ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containi...   103   3e-20
ref|XP_006296191.1| hypothetical protein CARUB_v10025353mg [Caps...   102   7e-20
ref|XP_007025629.1| Pentatricopeptide repeat superfamily protein...   102   9e-20
ref|NP_180932.1| pentatricopeptide repeat-containing protein [Ar...   102   9e-20
gb|EYU36539.1| hypothetical protein MIMGU_mgv1a025523mg [Mimulus...   101   1e-19
ref|XP_006339048.1| PREDICTED: pentatricopeptide repeat-containi...   101   1e-19
ref|XP_002879469.1| pentatricopeptide repeat-containing protein ...   101   1e-19
ref|XP_007050341.1| Basic helix-loop-helix DNA-binding superfami...   101   1e-19
ref|XP_006356345.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
ref|XP_007134299.1| hypothetical protein PHAVU_010G035600g [Phas...   100   3e-19

>ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  121 bits (303), Expect = 1e-25
 Identities = 58/88 (65%), Positives = 72/88 (81%)
 Frame = -3

Query: 266 MLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDLFLQTGLLDFYAKVGD 87
           MLR +++P KT+FS+ILR+CA   + +LGEAFH QI+KMG E+D+ LQTGLLDFYAKVGD
Sbjct: 1   MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60

Query: 86  LNSAKRLFTEMPQRDVVAHNVMILALGK 3
           L  AKR+F  MP+RDVVA+N MI AL K
Sbjct: 61  LKCAKRVFMGMPRRDVVANNAMISALSK 88



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 32/110 (29%), Positives = 54/110 (49%)
 Frame = -3

Query: 335 WNSTIQASIEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQIL 156
           WN+ I A ++       +  +  M  EN+ P + T   +L ACA L    +GE  H  I 
Sbjct: 173 WNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIR 232

Query: 155 KMGVEFDLFLQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMILALG 6
              ++ D+ L   L+D Y K G L +A  +F  + ++++   N +I+ LG
Sbjct: 233 TKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLG 282


>ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Vitis vinifera]
          Length = 1005

 Score =  112 bits (281), Expect = 5e-23
 Identities = 64/166 (38%), Positives = 95/166 (57%)
 Frame = -3

Query: 500 INPKHLQQIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTI 321
           +NP  L QIH+QI+ +GF H + + T+ ++    F K D A     + P     LWNS I
Sbjct: 45  LNP--LLQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMI 101

Query: 320 QASIEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVE 141
           +A        E L  Y  M+ + + PDK TF+ +L+AC      + G  FH +I + G+E
Sbjct: 102 RAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLE 161

Query: 140 FDLFLQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMILALGK 3
            D+F+  GL+D Y+K+GDL  A+ +F +MP+RDVVA N MI  L +
Sbjct: 162 RDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQ 207



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 45/146 (30%), Positives = 72/146 (49%)
 Frame = -3

Query: 455 NGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQASIEFDFGQEFLGF 276
           N  +  Y    +  S+ F F K D+           D   WN  I A ++    +E +  
Sbjct: 570 NALIDMYAKCGSLPSAEFLFNKTDFT---------KDEVTWNVIIAAYMQNGHAKEAISS 620

Query: 275 YNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDLFLQTGLLDFYAK 96
           ++ M  EN  P+  TF  +L A A L+  + G AFH+ I++MG   +  +   L+D YAK
Sbjct: 621 FHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAK 680

Query: 95  VGDLNSAKRLFTEMPQRDVVAHNVMI 18
            G L+ +++LF EM  +D V+ N M+
Sbjct: 681 CGQLDYSEKLFNEMDHKDTVSWNAML 706



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
 Frame = -3

Query: 521 FLLQNPLINPKHLQQIHS----QILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLP 354
           FL     I+ +  ++IH     Q + +  L   PL+  + + C    K     + LQ   
Sbjct: 336 FLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMY-AKCGETEKAKQLFWGLQGR- 393

Query: 353 IYDLSLWNSTIQASIEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEA 174
             DL  W++ I A ++  + +E L  +  M  + + P++ T   IL ACA LS  KLG++
Sbjct: 394 --DLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKS 451

Query: 173 FHSQILKMGVEFDLFLQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMI 18
            H   +K  ++ DL   T L+  YAK G   +A   F  M  RD+V  N +I
Sbjct: 452 IHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLI 503



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
 Frame = -3

Query: 347 DLSLWNSTIQASIEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFH 168
           D+  WNS I    +       +  +  +    I PD  T   ++ ACA L+    G   H
Sbjct: 495 DIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIH 554

Query: 167 SQILKMGVEFDLFLQTGLLDFYAKVGDLNSAKRLFTEMP-QRDVVAHNVMILA 12
             I+K+G E D  ++  L+D YAK G L SA+ LF +    +D V  NV+I A
Sbjct: 555 GLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607


>emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  112 bits (281), Expect = 5e-23
 Identities = 64/166 (38%), Positives = 95/166 (57%)
 Frame = -3

Query: 500 INPKHLQQIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTI 321
           +NP  L QIH+QI+ +GF H + + T+ ++    F K D A     + P     LWNS I
Sbjct: 45  LNP--LLQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMI 101

Query: 320 QASIEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVE 141
           +A        E L  Y  M+ + + PDK TF+ +L+AC      + G  FH +I + G+E
Sbjct: 102 RAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLE 161

Query: 140 FDLFLQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMILALGK 3
            D+F+  GL+D Y+K+GDL  A+ +F +MP+RDVVA N MI  L +
Sbjct: 162 RDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQ 207



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 45/146 (30%), Positives = 71/146 (48%)
 Frame = -3

Query: 455 NGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQASIEFDFGQEFLGF 276
           N  +  Y    +  S+ F F K D+           D   WN  I A ++    +E +  
Sbjct: 570 NALIDMYAKCGSLPSAEFLFNKTDFT---------KDEVTWNVIIAAYMQNGHAKEAISS 620

Query: 275 YNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDLFLQTGLLDFYAK 96
           ++ M  EN  P+  TF  +L A A L+  + G AFH+ I++MG   +  +   L+D YAK
Sbjct: 621 FHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAK 680

Query: 95  VGDLNSAKRLFTEMPQRDVVAHNVMI 18
            G L  +++LF EM  +D V+ N M+
Sbjct: 681 CGQLXYSEKLFNEMDHKDTVSWNAML 706



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
 Frame = -3

Query: 521 FLLQNPLINPKHLQQIHS----QILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLP 354
           FL     I+ +  ++IH     Q + +  L   PL+  + + C    K     + LQ   
Sbjct: 336 FLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMY-AKCGETEKAKQLFWGLQGR- 393

Query: 353 IYDLSLWNSTIQASIEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEA 174
             DL  W++ I A ++  + +E L  +  M  + + P++ T   IL ACA LS  KLG++
Sbjct: 394 --DLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKS 451

Query: 173 FHSQILKMGVEFDLFLQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMI 18
            H   +K  ++ DL   T L+  YAK G   +A   F  M  RD+V  N +I
Sbjct: 452 IHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLI 503



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
 Frame = -3

Query: 347 DLSLWNSTIQASIEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFH 168
           D+  WNS I    +       +  +  +    I PD  T   ++ ACA L+    G   H
Sbjct: 495 DIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIH 554

Query: 167 SQILKMGVEFDLFLQTGLLDFYAKVGDLNSAKRLFTEMP-QRDVVAHNVMILA 12
             I+K+G E D  ++  L+D YAK G L SA+ LF +    +D V  NV+I A
Sbjct: 555 GLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607


>emb|CBI15839.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  110 bits (275), Expect = 2e-22
 Identities = 56/106 (52%), Positives = 75/106 (70%), Gaps = 2/106 (1%)
 Frame = -3

Query: 323 IQASIEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGV 144
           I+ S+E     +FLGFY+ MLR +++P KT+FS+ILR+CA   + +LGEAFH QI+KMG 
Sbjct: 2   IRVSLESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGF 61

Query: 143 EFDLFLQTGLLDFYAKVGDLNSAKRLFTEMPQR--DVVAHNVMILA 12
           E+D+ LQTGLLDFYAK G +  A+ LF  M +R  + V  N MI A
Sbjct: 62  EYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISA 107



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
 Frame = -3

Query: 482 QQIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLS--LWNSTIQASI 309
           +  H QI+  GF +   L T  L    +   ++ A     N+   + +   WN+ I A +
Sbjct: 50  EAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYV 109

Query: 308 EFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDLF 129
           +       +  +  M  EN+ P + T   +L ACA L    +GE  H  I    ++ D+ 
Sbjct: 110 QCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVV 169

Query: 128 LQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMILALG 6
           L   L+D Y K G L +A  +F  + ++++   N +I+ LG
Sbjct: 170 LGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLG 210


>ref|XP_002311156.2| hypothetical protein POPTR_0008s05220g [Populus trichocarpa]
           gi|550332465|gb|EEE88523.2| hypothetical protein
           POPTR_0008s05220g [Populus trichocarpa]
          Length = 878

 Score =  110 bits (274), Expect = 3e-22
 Identities = 59/161 (36%), Positives = 91/161 (56%)
 Frame = -3

Query: 485 LQQIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQASIE 306
           L QIH ++  +G  + +    + + S   F K +YA F   +LP   + L+NS I+A   
Sbjct: 49  LLQIHVRLTVSGLQNDHLTNAHLIKSYLLFLKCNYARFLFDSLPNPSVMLYNSIIRAYSR 108

Query: 305 FDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDLFL 126
               QE +  Y+ ML + + PDK TF+ +L+AC      K G   H  I+  G+E D F+
Sbjct: 109 TKNHQEAINIYHCMLNKGLEPDKYTFTFVLKACTGALYFKEGILVHKDIIVRGLERDAFI 168

Query: 125 QTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMILALGK 3
            T L+D Y K+GDL  A+++F +MP++DVVA + MIL L +
Sbjct: 169 GTSLVDMYCKMGDLKLARKVFDKMPEKDVVAWSAMILGLSQ 209



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 49/154 (31%), Positives = 73/154 (47%)
 Frame = -3

Query: 479 QIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQASIEFD 300
           +IH      G      + T  ++   R  ++D A    Q +   DL  W++ I A ++  
Sbjct: 352 EIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQSG 411

Query: 299 FGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDLFLQT 120
           + QE L  + SM  E +  +K      L ACA +S  KLG++ H   +K  V+ D+ + T
Sbjct: 412 YPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGT 471

Query: 119 GLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMI 18
            L+  YAK G    A  LF  MP +DVV  N MI
Sbjct: 472 ALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMI 505



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
 Frame = -3

Query: 476  IHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIY-DLSLWNSTIQASIEFD 300
            IH +I+  GF     + T  +    +   L  A F         D   WN  I   +   
Sbjct: 555  IHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSG 614

Query: 299  FGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDLFLQT 120
               +    +  M  ENI P+  T   +L A A LS  + G   H+ +++MG +    +  
Sbjct: 615  HAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGN 674

Query: 119  GLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMI 18
             L+D YAK G L+ ++++F EM  +D V+ NVM+
Sbjct: 675  CLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVML 708



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
 Frame = -3

Query: 380 AIFFLQNLPIYDLSLWNSTIQASIEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACAS 201
           A+     +P  D+  WN+ I    +       L  ++ +    + P+  T   +L A A 
Sbjct: 486 ALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLSELNPNSGTMVGLLPAFAL 545

Query: 200 LSQNKLGEAFHSQILKMGVEFDLFLQTGLLDFYAKVGDLNSAKRLFTEMP-QRDVVAHNV 24
           L+    G   H +I+K G E +  ++T L+D YAK G L+ A+ LF     ++D V+ NV
Sbjct: 546 LNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNV 605

Query: 23  MI 18
           MI
Sbjct: 606 MI 607


>ref|XP_007213206.1| hypothetical protein PRUPE_ppb012387mg [Prunus persica]
           gi|462409071|gb|EMJ14405.1| hypothetical protein
           PRUPE_ppb012387mg [Prunus persica]
          Length = 588

 Score =  109 bits (273), Expect = 4e-22
 Identities = 59/156 (37%), Positives = 90/156 (57%)
 Frame = -3

Query: 485 LQQIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQASIE 306
           LQQ+H  I+ +G   +  LLT  ++       + Y      ++P  D  L+NS I+AS +
Sbjct: 32  LQQVHGHIVVSGSHRSRALLTKLITLACEAGSIFYTRRLFLSVPNPDSFLFNSLIKASSK 91

Query: 305 FDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDLFL 126
           F F Q  + FYN ML   I P   +F+ ++++CA +S  +LG   HS +L  G   D F+
Sbjct: 92  FGFPQHTVFFYNRMLGFRIAPSSYSFTSVIKSCADISALRLGRCVHSHVLVCGYGSDSFV 151

Query: 125 QTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMI 18
           Q  L+  Y+K GDL++A++LF +MP+R VVA N MI
Sbjct: 152 QAALVTLYSKSGDLDAARKLFDKMPERSVVAWNSMI 187



 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 43/153 (28%), Positives = 75/153 (49%)
 Frame = -3

Query: 476 IHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQASIEFDF 297
           +HS +L  G+     +    ++   +   LD A      +P   +  WNS I    +  F
Sbjct: 136 VHSHVLVCGYGSDSFVQAALVTLYSKSGDLDAARKLFDKMPERSVVAWNSMISGYEQNGF 195

Query: 296 GQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDLFLQTG 117
            +E +  +N M    + PD TTF  +L AC+ L    LG + H  ++  G+  ++ L T 
Sbjct: 196 SREAIEVFNQMRELGVEPDSTTFVSVLAACSQLGALGLGCSVHHDVINNGLHVNVALGTS 255

Query: 116 LLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMI 18
           L+  YA+ G+++ A+ +F  M +R+V+A   MI
Sbjct: 256 LIIMYARCGNVSKAREVFDSMNERNVIAWTAMI 288


>gb|EXB54618.1| hypothetical protein L484_019190 [Morus notabilis]
          Length = 553

 Score =  108 bits (271), Expect = 7e-22
 Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 1/183 (0%)
 Frame = -3

Query: 560 IPRNLSSLTDCLIFLLQNPLINPKHLQQIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDY 381
           I  NL   +   I  L     NPKHLQQ+H+QI+  G    + L++ F+        L Y
Sbjct: 4   ISHNLPKFSVPSIASLIKACRNPKHLQQVHAQIIRKGLEQDHFLISQFICLSQTLSNLSY 63

Query: 380 AIFFLQNLPIYDLSLWNSTIQASIEFD-FGQEFLGFYNSMLRENIIPDKTTFSVILRACA 204
           ++     +      LWN  I+   E   FG  F  F   M RE    D+ T+  +++ACA
Sbjct: 64  SVSVFDRILSPSTFLWNVLIKGYCEKSGFGGTFSVFVR-MKREGSFTDRYTYPSVIKACA 122

Query: 203 SLSQNKLGEAFHSQILKMGVEFDLFLQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNV 24
              + + G A H   L+ GVE+D+F++T L+DFY K G +  A+++F EMPQR+VV+   
Sbjct: 123 CEGRVREGRALHGSALRCGVEWDVFVRTSLIDFYGKCGKIGCARKMFDEMPQRNVVSWTA 182

Query: 23  MIL 15
           +++
Sbjct: 183 IVV 185


>ref|XP_004249810.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum lycopersicum]
          Length = 676

 Score =  106 bits (264), Expect = 5e-21
 Identities = 51/164 (31%), Positives = 89/164 (54%)
 Frame = -3

Query: 509 NPLINPKHLQQIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWN 330
           N L    HL+ +H  +L  G   +   + NF++ C     + YA      +P  +  +WN
Sbjct: 19  NKLSTLNHLKSLHVYLLRTGLHRSSFAVGNFITHCASLGLMSYAALLFDQMPEPNSFVWN 78

Query: 329 STIQASIEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKM 150
           + I+   +    +  L +++ M   N+ PD+ T+   +RAC+ L +   G + H Q++K+
Sbjct: 79  TLIRGFQQNRAPKYTLYYFDQMRANNVQPDRFTYPFAIRACSGLLECAKGVSLHGQVVKI 138

Query: 149 GVEFDLFLQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMI 18
           GV FD+F+ T L+DFY  +GDLN  KR+F E+P++D +    M+
Sbjct: 139 GVNFDVFVGTSLVDFYTAMGDLNMTKRVFEELPEKDEITWYAML 182



 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
 Frame = -3

Query: 431 LLTNFLSSCF-RFRKLDYAIFFLQNLPIYDLSLWNSTIQASIEFDFGQEFLGFYNSMLRE 255
           L+ N +  C  +  +++  +   + +P  DL  WN+ I   +      E + F+  M R 
Sbjct: 239 LMYNTILGCLAKNGEVECLLRLFREMPCRDLVSWNTVIGGLVRDGRINEAMRFFYEMERV 298

Query: 254 NIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDLFLQTGLLDFYAKVGDLNSA 75
           N+ PD  T + +L ACA       G+  HS I +   E +  + T L+D Y+K GDL SA
Sbjct: 299 NLSPDDVTLASLLSACAQAGALDTGKWLHSYIDRRCSELNAVIGTALVDMYSKCGDLGSA 358

Query: 74  KRLFTEMPQRDVVAHNVMIL 15
             +F +M +RDVVA + MI+
Sbjct: 359 ADVFNKMSERDVVAWSAMIM 378


>ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33760-like [Vitis vinifera]
          Length = 561

 Score =  105 bits (263), Expect = 6e-21
 Identities = 56/169 (33%), Positives = 94/169 (55%)
 Frame = -3

Query: 524 IFLLQNPLINPKHLQQIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYD 345
           + L   P + P  LQQ+H+ ++ +G   +  LLT  L+       + Y      ++   D
Sbjct: 24  VLLHAGPRLKP--LQQVHAHLIVSGSYRSRALLTKLLTLACTAGSILYTRQLFFSITNPD 81

Query: 344 LSLWNSTIQASIEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHS 165
             L+N+ I+AS +F F  + + FY  M+ ++I     TF+ +++ACA +S  ++G   HS
Sbjct: 82  SFLFNAIIKASSKFGFSCDAILFYRRMVADSIPQSNYTFTAVIKACADISALRIGRPIHS 141

Query: 164 QILKMGVEFDLFLQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMI 18
            +L  G + D F+Q  L+ FYAK GD+  AK++F  MP+R ++A N MI
Sbjct: 142 HVLVCGYDSDSFVQAALIAFYAKSGDVGEAKKVFDRMPERTIIAWNSMI 190


>gb|EXC18115.1| hypothetical protein L484_014516 [Morus notabilis]
          Length = 586

 Score =  105 bits (261), Expect = 1e-20
 Identities = 60/158 (37%), Positives = 90/158 (56%)
 Frame = -3

Query: 485 LQQIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQASIE 306
           LQQ H+ I+ +G   +  LLT  L+   +   + YA   L ++   D  L+NS ++AS  
Sbjct: 30  LQQAHAHIVVSGSHRSRALLTKLLTLACKAGSIGYAHRLLYSVRNPDAFLFNSLVKASSS 89

Query: 305 FDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDLFL 126
             F  + + FY  ML+  + P   TF+ +++ACA LS  +LG+  HS  L  G   D F+
Sbjct: 90  SGFAIDTVVFYLRMLQSRVSPSSYTFTSVIKACADLSSLRLGKCVHSHALVSGHGSDRFV 149

Query: 125 QTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMILA 12
           +  L++FYAK GDL  A+++F EM +R VVA N MI A
Sbjct: 150 EAALVNFYAKSGDLGVARKVFDEMSERTVVAWNSMISA 187



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 36/110 (32%), Positives = 58/110 (52%)
 Frame = -3

Query: 335 WNSTIQASIEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQIL 156
           WNS I A  +    +E +  +  M    + PD TTF  +L AC+ L    LG   H  I+
Sbjct: 181 WNSMISAYEQNGCAREAIEVFCRMRERGVRPDSTTFVSVLSACSQLGALGLGCWVHDYIV 240

Query: 155 KMGVEFDLFLQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMILALG 6
             G++  + L T L++ YA+ G+++ A+ +F  M +R+VV    +I A G
Sbjct: 241 GNGLDLTVVLGTSLINMYARCGNVSKAREVFDSMSERNVVTWTAVISAYG 290


>ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
           gi|449505311|ref|XP_004162432.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
          Length = 679

 Score =  103 bits (257), Expect = 3e-20
 Identities = 57/160 (35%), Positives = 89/160 (55%), Gaps = 4/160 (2%)
 Frame = -3

Query: 485 LQQIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQASIE 306
           L+QIH Q+       +  ++T F+SSC     +DYAI   Q   + +  L+N+ I+   E
Sbjct: 58  LRQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAE 117

Query: 305 FDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDLFL 126
               +  + F+  ML+  I PD+ TF  +L++ A+LS   +G A H  ILK G+EFD F+
Sbjct: 118 NSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFV 177

Query: 125 QTGLLDFYAKVGDLNSAKRLFTEMPQR----DVVAHNVMI 18
           +  L+D Y KV +L SA ++F E P+      V+  NV+I
Sbjct: 178 RVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLI 217


>ref|XP_006296191.1| hypothetical protein CARUB_v10025353mg [Capsella rubella]
           gi|482564899|gb|EOA29089.1| hypothetical protein
           CARUB_v10025353mg [Capsella rubella]
          Length = 579

 Score =  102 bits (254), Expect = 7e-20
 Identities = 49/161 (30%), Positives = 89/161 (55%)
 Frame = -3

Query: 491 KHLQQIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQAS 312
           K LQQ+H+ ++  G+  +  LLT  ++     R + Y      ++P+ D  L+NS I+++
Sbjct: 19  KQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKST 78

Query: 311 IEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDL 132
            +       + +Y  ML  N+ P   TF+ ++++CA LS  ++GE  H   +  G   D 
Sbjct: 79  SKLRLPLHCVAYYRRMLSSNVSPTNYTFTSVVKSCADLSALRIGEGVHCHAVVTGFGLDT 138

Query: 131 FLQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMILAL 9
           ++Q   + FY+K GDL +A+++F  MP++ +VA N +I  L
Sbjct: 139 YVQAAFVTFYSKCGDLRAARQVFDIMPEKSIVAWNSLISGL 179



 Score = 68.9 bits (167), Expect = 8e-10
 Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 3/160 (1%)
 Frame = -3

Query: 476 IHSQILTNGF-LHTY--PLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQASIE 306
           +H   +  GF L TY       F S C   R    A      +P   +  WNS I    +
Sbjct: 125 VHCHAVVTGFGLDTYVQAAFVTFYSKCGDLRA---ARQVFDIMPEKSIVAWNSLISGLEQ 181

Query: 305 FDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDLFL 126
               ++ +  +  M    + PD  TF  +L ACA      LG   H  I++ G++ ++ L
Sbjct: 182 NGMAEDAIRVFYQMQESGLEPDSATFVSLLSACAQTGAISLGSWVHQYIVREGLDLNVKL 241

Query: 125 QTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMILALG 6
            T L++ Y++ GD+  ++ +F +M + +V A   MI A G
Sbjct: 242 GTALVNLYSRCGDVGKSREVFDKMKETNVAAWTAMISAYG 281


>ref|XP_007025629.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508780995|gb|EOY28251.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 905

 Score =  102 bits (253), Expect = 9e-20
 Identities = 56/159 (35%), Positives = 88/159 (55%), Gaps = 1/159 (0%)
 Frame = -3

Query: 491 KHLQQIHSQILTNGFLHTYPLLTNFLS-SCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQA 315
           K LQQ+H++I+  G  H+  L+T  LS +C     + Y      ++   D  L++S I  
Sbjct: 346 KPLQQVHARIVITGLGHSQSLITKLLSFACAATSPVCYTRRLFLSISKPDTFLFHSLITL 405

Query: 314 SIEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFD 135
           + +F+F  E L  +  M+  NI P   TFS +++ C  L    +G+  H Q+L  G   D
Sbjct: 406 TSKFNFPLESLVCHRRMISANISPSNYTFSAVVKCCTDLMAFNIGKTVHCQVLSCGYGLD 465

Query: 134 LFLQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMI 18
            ++Q  L+ FYAK GDL  A+++F +MP++ VVA N MI
Sbjct: 466 SYVQAALVSFYAKSGDLGVARKVFDKMPEKTVVAWNSMI 504



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 45/157 (28%), Positives = 76/157 (48%)
 Frame = -3

Query: 476 IHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQASIEFDF 297
           +H Q+L+ G+     +    +S   +   L  A      +P   +  WNS I    +  F
Sbjct: 453 VHCQVLSCGYGLDSYVQAALVSFYAKSGDLGVARKVFDKMPEKTVVAWNSMISGYEQNGF 512

Query: 296 GQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDLFLQTG 117
           G+E +G +  M    + PD TTF  +L ACA L    LG   H  I++   + ++ L T 
Sbjct: 513 GKEAVGLFYLMQDSGVKPDSTTFVCLLSACAQLGAAGLGCWVHEYIVRNCFDVNVVLGTA 572

Query: 116 LLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMILALG 6
           L++ Y++ G+++ A+  F  M +++VVA   MI   G
Sbjct: 573 LINMYSRCGNVSKAREAFDSMEEKNVVAWTAMISGYG 609


>ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75101013|sp|P93011.1|PP182_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g33760 gi|1707020|gb|AAC69141.1| hypothetical protein
           [Arabidopsis thaliana] gi|330253787|gb|AEC08881.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 583

 Score =  102 bits (253), Expect = 9e-20
 Identities = 46/158 (29%), Positives = 88/158 (55%)
 Frame = -3

Query: 491 KHLQQIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQAS 312
           K LQQ+H+ ++  G+  +  LLT  ++     R + Y      ++P+ D  L+NS I+++
Sbjct: 23  KQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKST 82

Query: 311 IEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDL 132
            +       + +Y  ML  N+ P   TF+ ++++CA LS  ++G+  H   +  G   D 
Sbjct: 83  SKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDT 142

Query: 131 FLQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMI 18
           ++Q  L+ FY+K GD+  A+++F  MP++ +VA N ++
Sbjct: 143 YVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLV 180



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 3/160 (1%)
 Frame = -3

Query: 476 IHSQILTNGF-LHTY--PLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQASIE 306
           +H   + +GF L TY    L  F S C     ++ A      +P   +  WNS +    +
Sbjct: 129 VHCHAVVSGFGLDTYVQAALVTFYSKC---GDMEGARQVFDRMPEKSIVAWNSLVSGFEQ 185

Query: 305 FDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDLFL 126
                E +  +  M      PD  TF  +L ACA      LG   H  I+  G++ ++ L
Sbjct: 186 NGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKL 245

Query: 125 QTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMILALG 6
            T L++ Y++ GD+  A+ +F +M + +V A   MI A G
Sbjct: 246 GTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYG 285


>gb|EYU36539.1| hypothetical protein MIMGU_mgv1a025523mg [Mimulus guttatus]
          Length = 576

 Score =  101 bits (252), Expect = 1e-19
 Identities = 57/162 (35%), Positives = 85/162 (52%)
 Frame = -3

Query: 488 HLQQIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQASI 309
           H+QQ+H+ +L  G  H +   + FL  C     L YA    +++P+   + WN+ I+   
Sbjct: 16  HIQQLHAHLLITGLFHLHISRSKFLDFCATSVNLPYAAAVFRSVPLPLTNDWNAIIRGHA 75

Query: 308 EFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDLF 129
           +       +  Y SM R    PD  T S  L+ACA           HSQ+LK G + D+ 
Sbjct: 76  QSHHPINAVTCYLSMSRAPCKPDALTCSFFLKACARALARIESLQMHSQVLKSGFDADVL 135

Query: 128 LQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMILALGK 3
           LQT LLD YAK GDL+++ +LF EM +RD+ + N +I  L +
Sbjct: 136 LQTTLLDVYAKCGDLDNSCKLFDEMSKRDIASWNALISGLAQ 177



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
 Frame = -3

Query: 479 QIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQASIEFD 300
           Q+HSQ+L +GF     L T  L    +   LD +      +   D++ WN+ I    + +
Sbjct: 120 QMHSQVLKSGFDADVLLQTTLLDVYAKCGDLDNSCKLFDEMSKRDIASWNALISGLAQGN 179

Query: 299 FGQEFLGFYNSML------RENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEF 138
              E L  +N M       R  + P++ T    L AC+ L   K G+  +  I K  ++ 
Sbjct: 180 RPYEALKLFNRMREGGNDGRGLMTPNEVTVLGALSACSQLGAIKEGDKVYEYIRKSFLDD 239

Query: 137 DLFLQTGLLDFYAKVGDLNSAKRLFTEMP-QRDVVAHNVMIL 15
           ++ +   ++D YAK G +  A  +F  M   + ++  N MI+
Sbjct: 240 NVIVCNAVIDMYAKCGAVEKAYTVFQGMNCSKSIITWNTMIM 281


>ref|XP_006339048.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 680

 Score =  101 bits (252), Expect = 1e-19
 Identities = 51/164 (31%), Positives = 87/164 (53%)
 Frame = -3

Query: 509 NPLINPKHLQQIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWN 330
           N L    HL+ +H  +L  G  H+   + NF++ C     + YA      +   +  +WN
Sbjct: 23  NKLSTLNHLKSLHVYLLRTGLHHSSFAVGNFITHCASLGLMSYAAQLFDQMSEPNSFVWN 82

Query: 329 STIQASIEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKM 150
           + I+   +    +  L +++ M   N  PD+ T+   +RAC+ L +   G + H Q++K+
Sbjct: 83  TLIRGFQQNHSPKYTLYYFDQMRVNNAQPDRFTYPFTIRACSGLLEFAKGASLHGQVVKI 142

Query: 149 GVEFDLFLQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMI 18
           GV FD+F+ T L+DFY  +GDLN  K++F E+P +D V    M+
Sbjct: 143 GVNFDVFVGTSLVDFYTAMGDLNMTKQVFEELPDKDEVTWYAML 186



 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
 Frame = -3

Query: 431 LLTNFLSSCF-RFRKLDYAIFFLQNLPIYDLSLWNSTIQASIEFDFGQEFLGFYNSMLRE 255
           L+ N +  C  +  ++D  +     +P  DL  WN+ I   +      E + F+  M R 
Sbjct: 243 LMYNTILGCLAKNGEVDRLLRLFHEMPCRDLVSWNTVIGGLVRDGRINEAMRFFYEMERV 302

Query: 254 NIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDLFLQTGLLDFYAKVGDLNSA 75
           N+ PD  T + +L ACA      +G+  HS I +   E +  + T L+D Y K GDL SA
Sbjct: 303 NLSPDDVTLASLLSACAQAGALDIGKWLHSYIDRRCSELNAVIGTALVDMYCKCGDLGSA 362

Query: 74  KRLFTEMPQRDVVAHNVMIL 15
             +F +M +RDVVA + MI+
Sbjct: 363 ADVFNKMSERDVVAWSAMIM 382


>ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325308|gb|EFH55728.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 583

 Score =  101 bits (252), Expect = 1e-19
 Identities = 47/158 (29%), Positives = 88/158 (55%)
 Frame = -3

Query: 491 KHLQQIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQAS 312
           K LQQ+H+ ++   +  +  LLT  ++     R + Y      ++P+ D  L+NS I+++
Sbjct: 23  KQLQQVHAHLIVTSYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKST 82

Query: 311 IEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDL 132
            +       + +Y  ML  N+ P   TF+ ++++CA LS  K+G+  H   +  G   D 
Sbjct: 83  SKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCHAVVSGFGLDT 142

Query: 131 FLQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMI 18
           ++Q  L+ FY+K GD+ +A+++F  MP++ VVA N ++
Sbjct: 143 YVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLV 180



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
 Frame = -3

Query: 476 IHSQILTNGF-LHTY--PLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQASIE 306
           +H   + +GF L TY    L  F S C     ++ A      +P   +  WNS +    +
Sbjct: 129 VHCHAVVSGFGLDTYVQAALVTFYSKC---GDMEAARQVFDRMPEKSVVAWNSLVSGFEQ 185

Query: 305 FDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDLFL 126
               ++ +  +  M      PD  TF  +L ACA      LG   H  I+  G++ ++ L
Sbjct: 186 NGLAEDAIRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKL 245

Query: 125 QTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMILALG 6
            T L++ Y++ GD+  A+ +F +M + +V A   MI A G
Sbjct: 246 GTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYG 285


>ref|XP_007050341.1| Basic helix-loop-helix DNA-binding superfamily protein [Theobroma
           cacao] gi|508702602|gb|EOX94498.1| Basic
           helix-loop-helix DNA-binding superfamily protein
           [Theobroma cacao]
          Length = 600

 Score =  101 bits (251), Expect = 1e-19
 Identities = 53/160 (33%), Positives = 87/160 (54%)
 Frame = -3

Query: 497 NPKHLQQIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQ 318
           N   L+ I++ ++         L   F+S+C  F ++DYAI     +   ++ ++N+ I+
Sbjct: 60  NLNQLETIYATMIKTNANQDCFLTNQFVSACATFCRMDYAILAFTQMQKPNVFVYNALIK 119

Query: 317 ASIEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEF 138
             +      + L ++  MLR  + P   TFS +++AC  +S+   GE+ H Q+ K G E 
Sbjct: 120 GLVHCHNPFQALDYHKHMLRAGVWPSSFTFSSLVKACGLVSELGFGESVHGQVWKHGFES 179

Query: 137 DLFLQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMI 18
            +F+QT L+DFYA VG    +KR+F EMP RDV A   M+
Sbjct: 180 HVFVQTALVDFYANVGKFAESKRVFDEMPDRDVFAWTTMV 219



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 34/131 (25%), Positives = 64/131 (48%)
 Frame = -3

Query: 401 RFRKLDYAIFFLQNLPIYDLSLWNSTIQASIEFDFGQEFLGFYNSMLRENIIPDKTTFSV 222
           R   ++ A  F   +P+ D+  W S I    +    +E L  +  M R  + PD+ T + 
Sbjct: 255 RVGDVESAELFFNQMPVKDIISWTSMINCYSKNKQFREALAVFEEMRRNKVSPDEVTMAS 314

Query: 221 ILRACASLSQNKLGEAFHSQILKMGVEFDLFLQTGLLDFYAKVGDLNSAKRLFTEMPQRD 42
           ++ ACA L     G+  H  +++ G   D+++ + L+D YAK G L  +   F ++ +++
Sbjct: 315 VISACAHLGALNTGKEIHHYVMQNGFYLDVYIGSALVDMYAKCGSLERSLLAFFKLREKN 374

Query: 41  VVAHNVMILAL 9
           +   N +I  L
Sbjct: 375 LFCWNSVIEGL 385


>ref|XP_006356345.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 608

 Score =  100 bits (249), Expect = 3e-19
 Identities = 61/159 (38%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
 Frame = -3

Query: 491 KHLQQIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQAS 312
           K L++ H QI+ NG ++   ++   ++    F  LDY +   +NL    L  +N+ IQ  
Sbjct: 16  KQLKETHLQIIVNGLMNNNFIVPKLITFSSNFISLDYGLHVFENLQNPTLISYNTLIQCF 75

Query: 311 IEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDL 132
           I     +  L  YN M   NI P+  TF+ +LR   S    + GE  HSQI KMG E  +
Sbjct: 76  IGKTL-KYALYTYNHMRVSNITPNSFTFTFLLRCFESFDALQAGEVVHSQIAKMGFESSV 134

Query: 131 FLQTGLLDFYAKV-GDLNSAKRLFTEMPQRDVVAHNVMI 18
           F +  L+DFYAK  G+L SA+++F EM  RDVV+ N MI
Sbjct: 135 FAKNTLMDFYAKCGGNLGSARKVFDEMSDRDVVSWNTMI 173



 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
 Frame = -3

Query: 359 LPIYDLSLWNSTIQASIEFDFGQEFLGFYNSMLRE-NIIPDKTTFSVILRACASLSQNKL 183
           +P  ++  WN+ I   +      E L  +  ML + N  P++TT   +L AC+ L  ++ 
Sbjct: 285 IPEKNVVSWNAMIAGYVNNHMFDEALSVFQHMLIDGNCKPNQTTLISVLSACSHLGSHEH 344

Query: 182 GEAFHSQILKMGVEFDLFLQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMILAL 9
           G+   S I K   +  + L   L+D +AK GD+ +AK +F  M QR ++    MI  L
Sbjct: 345 GKWIDSFIRKNKFDLSVPLGNALIDTFAKCGDMENAKAVFLRMAQRCIITWTTMISGL 402


>ref|XP_007134299.1| hypothetical protein PHAVU_010G035600g [Phaseolus vulgaris]
           gi|561007344|gb|ESW06293.1| hypothetical protein
           PHAVU_010G035600g [Phaseolus vulgaris]
          Length = 558

 Score =  100 bits (249), Expect = 3e-19
 Identities = 51/161 (31%), Positives = 91/161 (56%)
 Frame = -3

Query: 491 KHLQQIHSQILTNGFLHTYPLLTNFLSSCFRFRKLDYAIFFLQNLPIYDLSLWNSTIQAS 312
           K L+ +++ ++         L+  F+SSC     +D A     ++   +  ++N+ I+  
Sbjct: 21  KSLESVYACMIKTNTTQDCFLMNQFISSCSALSYVDLASSTFAHMENPNAFVYNALIRGC 80

Query: 311 IEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACASLSQNKLGEAFHSQILKMGVEFDL 132
               +    LGFY  MLR N++P+  +FS +++AC  L  +  G+A H  I K G +  +
Sbjct: 81  GHCCYPDRALGFYIHMLRNNVMPNSYSFSSLIKACTLLMDSAFGKAVHGHIWKNGFDSHM 140

Query: 131 FLQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVMILAL 9
           F+QT L++FY+ +GD++ ++R+F +MP+RDV A   MI AL
Sbjct: 141 FVQTTLIEFYSTLGDVSGSRRVFDDMPERDVFAWTTMISAL 181



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/121 (23%), Positives = 60/121 (49%)
 Frame = -3

Query: 380 AIFFLQNLPIYDLSLWNSTIQASIEFDFGQEFLGFYNSMLRENIIPDKTTFSVILRACAS 201
           A F    +   D+  W + +          + +  ++ M+ + +IPD+ T S ++ ACA 
Sbjct: 221 AEFLFNQMLARDIISWTTMMSCFSRNKRYMDVVRLFHDMIDKGMIPDEVTMSTVISACAH 280

Query: 200 LSQNKLGEAFHSQILKMGVEFDLFLQTGLLDFYAKVGDLNSAKRLFTEMPQRDVVAHNVM 21
           L    LG+  H  ++    + D+++ + L+D YAK G ++ A  +F ++  +++   N +
Sbjct: 281 LGALDLGKEVHLYLMLHEFDLDVYIGSSLIDMYAKCGSIDRALLVFYKLQNKNLYCWNSI 340

Query: 20  I 18
           I
Sbjct: 341 I 341