BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00036440
         (688 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi...   305   1e-80
ref|XP_004289184.1| PREDICTED: pentatricopeptide repeat-containi...   271   1e-70
gb|EXC31089.1| hypothetical protein L484_001076 [Morus notabilis]     264   2e-68
ref|XP_006354595.1| PREDICTED: pentatricopeptide repeat-containi...   264   2e-68
ref|XP_006380676.1| hypothetical protein POPTR_0007s10370g [Popu...   263   4e-68
ref|XP_007047423.1| Tetratricopeptide repeat (TPR)-like superfam...   262   9e-68
ref|XP_004229576.1| PREDICTED: pentatricopeptide repeat-containi...   259   6e-67
ref|XP_002524945.1| pentatricopeptide repeat-containing protein,...   256   6e-66
emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]   255   8e-66
ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containi...   247   3e-63
ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containi...   238   1e-60
ref|XP_006466530.1| PREDICTED: pentatricopeptide repeat-containi...   237   2e-60
ref|XP_007155872.1| hypothetical protein PHAVU_003G238900g [Phas...   237   2e-60
ref|XP_006426011.1| hypothetical protein CICLE_v10025167mg [Citr...   231   1e-58
ref|XP_004509094.1| PREDICTED: pentatricopeptide repeat-containi...   223   4e-56
ref|NP_195454.1| pentatricopeptide repeat-containing protein [Ar...   199   7e-49
ref|XP_006282456.1| hypothetical protein CARUB_v10004360mg [Caps...   197   2e-48
ref|XP_006844317.1| hypothetical protein AMTR_s00143p00072540 [A...   196   8e-48
ref|XP_002866951.1| pentatricopeptide repeat-containing protein ...   194   2e-47
dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]    191   2e-46

>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  305 bits (780), Expect = 1e-80
 Identities = 147/199 (73%), Positives = 171/199 (85%)
 Frame = +1

Query: 91  HHLLPVDRALFLIDKSKSVRHLLQIHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSL 270
           HH +  +R   LIDKSK++ HLLQIHA L R+GL+   ILNFKLQRSY+SLGRLDYS +L
Sbjct: 25  HHFISTNRLAVLIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVAL 84

Query: 271 FDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSCPLELGK 450
           F RT NP+VFFWT+IIHGHAL+GLH+ AL  Y+QMLT GV PNAFTFSSILK CP+E GK
Sbjct: 85  FGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPGK 144

Query: 451 SLHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYAKHG 630
           +LH+QA+KL  D+D YVRT LLDVYARGGDVVSA+QLFDTMPEKSLVSLTAM+TCYAKHG
Sbjct: 145 ALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHG 204

Query: 631 DVDGARVLFDGVDERDVVC 687
           ++D ARVLFDG++ERD VC
Sbjct: 205 ELDAARVLFDGMEERDGVC 223



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 4/146 (2%)
 Frame = +1

Query: 232 YSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTF 411
           Y+  G LD +R LFD     +   W  +I G+   G+   AL L+ +ML     PN  T 
Sbjct: 200 YAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTV 259

Query: 412 SSILKSC----PLELGKSLHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPE 579
            S+L +C     LE G+ +H+      +  + +V T+L+D+Y++ G +  AR +FD + +
Sbjct: 260 LSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDD 319

Query: 580 KSLVSLTAMITCYAKHGDVDGARVLF 657
           K +V+  +MI  YA HG    A  LF
Sbjct: 320 KDVVAWNSMIVGYAMHGFSQEALQLF 345



 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 30/90 (33%), Positives = 49/90 (54%)
 Frame = +1

Query: 163 IHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGL 342
           +H+ +  NG++ +  +   L   YS  G L+ +R +FD+  + +V  W S+I G+A+ G 
Sbjct: 278 VHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGF 337

Query: 343 HQHALFLYSQMLTHGVVPNAFTFSSILKSC 432
            Q AL L+  M   G+ P   TF  IL +C
Sbjct: 338 SQEALQLFKSMCRMGLHPTNITFIGILSAC 367


>ref|XP_004289184.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 619

 Score =  271 bits (693), Expect = 1e-70
 Identities = 132/199 (66%), Positives = 157/199 (78%)
 Frame = +1

Query: 91  HHLLPVDRALFLIDKSKSVRHLLQIHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSL 270
           +H   +DR  FL+DK  S+RHLLQ HA LLR+ L     LNFKLQRSY+S  RLDYS +L
Sbjct: 16  NHPPSIDRLTFLLDKPNSIRHLLQTHALLLRHNLHHHPTLNFKLQRSYASFNRLDYSVAL 75

Query: 271 FDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSCPLELGK 450
           F +T NP+VFFW+SII+ H+ +GLH  AL  Y+QMLT+GV PN FTFS++ KSCP+  GK
Sbjct: 76  FRQTQNPSVFFWSSIINSHSKRGLHHLALTFYTQMLTNGVEPNCFTFSALFKSCPIVTGK 135

Query: 451 SLHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYAKHG 630
            LH  A+K   D+D YVRT L+DVYARGGDVV AR+LFDTMPEKSLVSLTAMITCYAK G
Sbjct: 136 VLHCHAIKFGFDSDLYVRTGLVDVYARGGDVVGARELFDTMPEKSLVSLTAMITCYAKRG 195

Query: 631 DVDGARVLFDGVDERDVVC 687
           +VD ARVLFDG++ERDVVC
Sbjct: 196 EVDEARVLFDGMEERDVVC 214



 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
 Frame = +1

Query: 232 YSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTF 411
           Y+  G +D +R LFD     +V  W  +I  +A  G+   AL L+ +ML   V P+  T 
Sbjct: 191 YAKRGEVDEARVLFDGMEERDVVCWNVMIDAYAQHGMPNEALLLFRRMLVEKVKPDGVTV 250

Query: 412 SSILKSC----PLELGKSLHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPE 579
            S+L +C     LE G+ +H+      +  D  V ++L+D+Y + G    AR +FD +  
Sbjct: 251 LSLLSACGQIGALESGRWVHSYVESNGIRIDVQVGSALIDMYCKCGSWEDARLVFDRIGG 310

Query: 580 KSLVSLTAMITCYAKHG 630
           K +V   +MI  YA HG
Sbjct: 311 KDVVVWNSMIVGYAMHG 327


>gb|EXC31089.1| hypothetical protein L484_001076 [Morus notabilis]
          Length = 625

 Score =  264 bits (674), Expect = 2e-68
 Identities = 130/194 (67%), Positives = 152/194 (78%)
 Frame = +1

Query: 106 VDRALFLIDKSKSVRHLLQIHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLFDRTH 285
           VDR  FL+D S+S+  LLQ HA+LLR+G     ILNFKLQRSY++LGRLDYS +LF RT 
Sbjct: 27  VDRFAFLLDNSRSITRLLQTHASLLRHGFHDHPILNFKLQRSYAALGRLDYSVALFRRTP 86

Query: 286 NPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSCPLELGKSLHAQ 465
            PNVFFWTS+IH HA  GLH  AL  Y++MLT GV PN FTFS++LK C LE G++LH Q
Sbjct: 87  RPNVFFWTSLIHAHAQSGLHDQALLYYAEMLTQGVDPNCFTFSTVLKVCSLEPGRALHCQ 146

Query: 466 ALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYAKHGDVDGA 645
           A+KL  D+D YVRT L+DVYAR  DV SA+ LFDTMPE+SLVSLTAMITCYAKHG VD A
Sbjct: 147 AIKLGFDSDLYVRTGLVDVYARARDVWSAQHLFDTMPERSLVSLTAMITCYAKHGKVDEA 206

Query: 646 RVLFDGVDERDVVC 687
           R LFD + +RDVVC
Sbjct: 207 RALFDRMGDRDVVC 220



 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 50/147 (34%), Positives = 84/147 (57%), Gaps = 4/147 (2%)
 Frame = +1

Query: 232 YSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTF 411
           Y+  G++D +R+LFDR  + +V  W  +I G+A  G+   +LFL+ +ML   V PN  T 
Sbjct: 197 YAKHGKVDEARALFDRMGDRDVVCWNVMIDGYAQHGMPNESLFLFRKMLAAKVRPNEVTV 256

Query: 412 SSILKSC----PLELGKSLHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPE 579
            ++L +C     LE G+ LH      ++  + +V T+L+D+Y++ G +  AR +FD + +
Sbjct: 257 LAVLSACGQIGALESGRWLHTYMANNRIQINVHVGTALIDMYSKCGSLEDARLVFDRIRD 316

Query: 580 KSLVSLTAMITCYAKHGDVDGARVLFD 660
           K +++   MI  YA HG    A  LF+
Sbjct: 317 KDVIAWNTMIVGYAMHGFSQDALQLFN 343



 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 28/90 (31%), Positives = 48/90 (53%)
 Frame = +1

Query: 163 IHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGL 342
           +H  +  N ++ +  +   L   YS  G L+ +R +FDR  + +V  W ++I G+A+ G 
Sbjct: 275 LHTYMANNRIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVIAWNTMIVGYAMHGF 334

Query: 343 HQHALFLYSQMLTHGVVPNAFTFSSILKSC 432
            Q AL L+++M   G  P   TF  +L +C
Sbjct: 335 SQDALQLFNEMCRIGYQPTDITFIGVLSAC 364


>ref|XP_006354595.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565376192|ref|XP_006354596.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like isoform X2 [Solanum tuberosum]
           gi|565376194|ref|XP_006354597.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like isoform X3 [Solanum tuberosum]
           gi|565376199|ref|XP_006354598.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like isoform X4 [Solanum tuberosum]
           gi|565376201|ref|XP_006354599.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like isoform X5 [Solanum tuberosum]
           gi|565376203|ref|XP_006354600.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like isoform X6 [Solanum tuberosum]
          Length = 624

 Score =  264 bits (674), Expect = 2e-68
 Identities = 128/193 (66%), Positives = 159/193 (82%)
 Frame = +1

Query: 109 DRALFLIDKSKSVRHLLQIHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLFDRTHN 288
           DR  FLIDKSK++R LLQIHA L+RNGLE D +LNF+LQ+SYSSLG L +S ++F RTH+
Sbjct: 28  DRLKFLIDKSKNIRQLLQIHAFLIRNGLESDPVLNFRLQQSYSSLGHLQHSVTVFKRTHS 87

Query: 289 PNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSCPLELGKSLHAQA 468
           P VF +T+IIH H +  L++ A  LY QMLT  + PNAFTFS++LK+CPLE GK+LH QA
Sbjct: 88  PTVFSYTAIIHNHVINDLYEQAYVLYIQMLTQNIEPNAFTFSTLLKTCPLESGKALHCQA 147

Query: 469 LKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYAKHGDVDGAR 648
           LKL  ++DTYVRT+L+DVYARG D+VSAR+LFDTMPE+SLVSLT MIT YAK+G V  AR
Sbjct: 148 LKLGYESDTYVRTALVDVYARGSDIVSARKLFDTMPERSLVSLTTMITGYAKNGHVQEAR 207

Query: 649 VLFDGVDERDVVC 687
            LFDG+++RDVVC
Sbjct: 208 ELFDGMEDRDVVC 220



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
 Frame = +1

Query: 232 YSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTF 411
           Y+  G +  +R LFD   + +V  W ++I G+   G     L L+ QML   V PN  T 
Sbjct: 197 YAKNGHVQEARELFDGMEDRDVVCWNAMIDGYGQHGRPSETLVLFRQMLLSKVKPNEVTV 256

Query: 412 SSILKSCP----LELGKSLHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPE 579
            + L +C     LE G+ +HA     ++  + +V T+ +D+Y++ G +  AR +FD M +
Sbjct: 257 VAALSACAQMGVLESGRWIHAYVKSNRIQVNKHVGTAFIDMYSKSGSLEDARMVFDQMRD 316

Query: 580 KSLVSLTAMITCYAKHG 630
           K +++  +MI  YA HG
Sbjct: 317 KDVITWNSMIVGYAMHG 333



 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
 Frame = +1

Query: 163 IHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGL 342
           IHA +  N ++ +  +       YS  G L+ +R +FD+  + +V  W S+I G+A+ G 
Sbjct: 275 IHAYVKSNRIQVNKHVGTAFIDMYSKSGSLEDARMVFDQMRDKDVITWNSMIVGYAMHGF 334

Query: 343 HQHALFLYSQMLTHGVVPNAFTFSSILKSCP----LELGKSLHAQALKLKLDTDTYVRTS 510
              AL ++ +M   G+ P   TF  IL +C     +  G +      K  ++        
Sbjct: 335 SLEALQVFYEMCKLGLQPTDITFIGILSACANAGLVSEGWTYFQLMEKYLIEPKIEHYGC 394

Query: 511 LLDVYARGGDVVSARQLFDTMP-EKSLVSLTAMITCYAKHGDVDGARVLFDGVDERDV 681
           ++++  R G +  A +   +M  +   +    ++T    HGDV  A  + + + E+D+
Sbjct: 395 MVNLLGRAGQLEKAYEFVKSMKIDSDPILWGTLLTACRIHGDVRLAEKIMEFLVEQDL 452


>ref|XP_006380676.1| hypothetical protein POPTR_0007s10370g [Populus trichocarpa]
           gi|550334566|gb|ERP58473.1| hypothetical protein
           POPTR_0007s10370g [Populus trichocarpa]
          Length = 631

 Score =  263 bits (672), Expect = 4e-68
 Identities = 131/198 (66%), Positives = 152/198 (76%)
 Frame = +1

Query: 94  HLLPVDRALFLIDKSKSVRHLLQIHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLF 273
           H  P ++   LIDKSKS+ HL Q+HA L R+ L    ILNFKLQRSYSSLG L+ S +LF
Sbjct: 29  HNPPPEKIAILIDKSKSLNHLNQVHAFLYRHNLHDHPILNFKLQRSYSSLGHLNRSLALF 88

Query: 274 DRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSCPLELGKS 453
           ++T NPNVFF+TSIIH H +  LH  AL  Y QML+  V PNAFTFSSILKSCP+E  K 
Sbjct: 89  NKTQNPNVFFYTSIIHAHTIHNLHHLALLFYVQMLSQNVFPNAFTFSSILKSCPIEPAKL 148

Query: 454 LHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYAKHGD 633
           LH QA+K   D + YVRT L+DVYARGGDVVSAR LFD MPEKSLVSLTAMITCYAK+G 
Sbjct: 149 LHGQAIKFGFDAELYVRTCLVDVYARGGDVVSARTLFDAMPEKSLVSLTAMITCYAKYGM 208

Query: 634 VDGARVLFDGVDERDVVC 687
           +D ARVLFDG++ERD +C
Sbjct: 209 IDEARVLFDGLEERDAIC 226



 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
 Frame = +1

Query: 232 YSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTF 411
           Y+  G +D +R LFD     +   W  +I G+A  GL    L L+ QML   V PN  T 
Sbjct: 203 YAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPNEVTV 262

Query: 412 SSILKSC----PLELGKSLHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPE 579
            ++L +C     LE G+ +H+      +  +  V TSL+D+Y++ G +  AR +F+ +  
Sbjct: 263 LAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFERISN 322

Query: 580 KSLVSLTAMITCYAKHGDVDGARVLF 657
           K +V+  +M+  YA HG    A  LF
Sbjct: 323 KDVVAWNSMVVGYAMHGFSQDALRLF 348



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 29/90 (32%), Positives = 48/90 (53%)
 Frame = +1

Query: 163 IHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGL 342
           +H+ +  NG+  +  +   L   YS  G L+ +R +F+R  N +V  W S++ G+A+ G 
Sbjct: 281 VHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGF 340

Query: 343 HQHALFLYSQMLTHGVVPNAFTFSSILKSC 432
            Q AL L+ +M   G  P   TF  +L +C
Sbjct: 341 SQDALRLFKEMCMIGYQPTDITFIGVLNAC 370


>ref|XP_007047423.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao] gi|508699684|gb|EOX91580.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 633

 Score =  262 bits (669), Expect = 9e-68
 Identities = 128/193 (66%), Positives = 155/193 (80%)
 Frame = +1

Query: 109 DRALFLIDKSKSVRHLLQIHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLFDRTHN 288
           D+   L+DKS S+ HLLQIHA LLR GL    ILNFKLQRSYSSLGRLDYS +LF+RT N
Sbjct: 36  DKLALLLDKSNSIHHLLQIHATLLRRGLHDHPILNFKLQRSYSSLGRLDYSLALFNRTLN 95

Query: 289 PNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSCPLELGKSLHAQA 468
           PN+FF+TSII+ HAL GL Q ALF+Y++ML  GV PN FTFSSILKSC  E GK LH+QA
Sbjct: 96  PNIFFYTSIINAHALHGLSQEALFIYTRMLFEGVQPNEFTFSSILKSCSFEHGKMLHSQA 155

Query: 469 LKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYAKHGDVDGAR 648
           +K   D+D YV+T L+DVYARGGD+ SAR +F+ M EKSLVS T M+TCYAKHG+++ AR
Sbjct: 156 IKFGFDSDLYVKTGLVDVYARGGDIGSARLVFERMLEKSLVSFTTMLTCYAKHGELEEAR 215

Query: 649 VLFDGVDERDVVC 687
           +LFDG+ ++DVVC
Sbjct: 216 LLFDGMVKKDVVC 228



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
 Frame = +1

Query: 190 LEQDTILNFKLQRSYSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYS 369
           LE+  +    +   Y+  G L+ +R LFD     +V  W  +I G+A  G+   AL L+ 
Sbjct: 191 LEKSLVSFTTMLTCYAKHGELEEARLLFDGMVKKDVVCWNVMIDGYAQHGMPNEALVLFR 250

Query: 370 QMLTHGVVPNAFTFSSILKSCP----LELGKSLHAQALKLKLDTDTYVRTSLLDVYARGG 537
           +ML     PN  T  ++L +C     LE G+ LH       +  +  V T+L+D+Y++ G
Sbjct: 251 RMLAAKARPNEITILAVLSACAQLGALESGRWLHTYIDNNNIQVNVRVATALIDMYSKCG 310

Query: 538 DVVSARQLFDTMPEKSLVSLTAMITCYAKHGDVDGARVLFDGV 666
            +  AR +FD +P+K +V+  +MI  YA HG    A  LF G+
Sbjct: 311 SLEDARLVFDRIPDKDVVAWNSMIIGYALHGFSQEALELFHGM 353


>ref|XP_004229576.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Solanum lycopersicum]
          Length = 624

 Score =  259 bits (662), Expect = 6e-67
 Identities = 126/193 (65%), Positives = 157/193 (81%)
 Frame = +1

Query: 109 DRALFLIDKSKSVRHLLQIHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLFDRTHN 288
           DR  FLIDKSK++R LLQIHA L+RNGLE D +LNF+LQ+SYSSLG L +S  +F RTH+
Sbjct: 28  DRLKFLIDKSKNIRQLLQIHAFLIRNGLESDPVLNFRLQQSYSSLGHLQHSVKVFKRTHS 87

Query: 289 PNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSCPLELGKSLHAQA 468
           P VF +T+IIH H +  L++ A  LY QMLTH + PNAFTFSS+LK+CPLE GK+LH QA
Sbjct: 88  PTVFSYTAIIHNHVINDLYEQAFVLYIQMLTHNIEPNAFTFSSMLKTCPLESGKALHCQA 147

Query: 469 LKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYAKHGDVDGAR 648
           LKL  ++DTYVRT+L+DVYARG D+VSA +LFDTM E+SLVSLT MIT YAK+G +  A 
Sbjct: 148 LKLGYESDTYVRTALVDVYARGSDIVSACKLFDTMTERSLVSLTTMITGYAKNGHIQEAG 207

Query: 649 VLFDGVDERDVVC 687
           VLF+G+++RDVVC
Sbjct: 208 VLFEGMEDRDVVC 220



 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 42/137 (30%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
 Frame = +1

Query: 232 YSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTF 411
           Y+  G +  +  LF+   + +V  W ++I G++  G    AL L+ +ML   V PN  T 
Sbjct: 197 YAKNGHIQEAGVLFEGMEDRDVVCWNAMIDGYSQHGRPNEALVLFRKMLLSKVKPNEVTV 256

Query: 412 SSILKSCP----LELGKSLHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPE 579
            + L +C     LE G+ +HA     ++  + +V T+ +D+Y++ G +  AR +FD M +
Sbjct: 257 VAALSACAQMGVLESGRWIHAYVKSNRIQINKHVGTAFIDMYSKSGSLEDARMVFDQMRD 316

Query: 580 KSLVSLTAMITCYAKHG 630
           K +++  +MI  YA HG
Sbjct: 317 KDVITWNSMIVGYAMHG 333



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 5/178 (2%)
 Frame = +1

Query: 163 IHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGL 342
           IHA +  N ++ +  +       YS  G L+ +R +FD+  + +V  W S+I G+A+ G 
Sbjct: 275 IHAYVKSNRIQINKHVGTAFIDMYSKSGSLEDARMVFDQMRDKDVITWNSMIVGYAMHGF 334

Query: 343 HQHALFLYSQMLTHGVVPNAFTFSSILKSCP----LELGKSLHAQALKLKLDTDTYVRTS 510
              AL L+++M   G+ P   TF  IL +C     L  G +      K  ++        
Sbjct: 335 SLEALQLFNEMCKLGLQPTDITFIGILSACANAGLLSEGWTYFQLMEKYLIEPKIEHYGC 394

Query: 511 LLDVYARGGDVVSARQLFDTMP-EKSLVSLTAMITCYAKHGDVDGARVLFDGVDERDV 681
           ++++  R G +  A +   +M  +   +    ++T    HGDV  A  + + + E+D+
Sbjct: 395 MVNLLGRAGQLEKAYEFVKSMKIDSDPILWGTLLTACRIHGDVRLAEKIMEFLVEQDL 452


>ref|XP_002524945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535780|gb|EEF37442.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 417

 Score =  256 bits (653), Expect = 6e-66
 Identities = 127/193 (65%), Positives = 152/193 (78%)
 Frame = +1

Query: 109 DRALFLIDKSKSVRHLLQIHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLFDRTHN 288
           ++   +IDKSKS+ +L QIHA L R+ L    IL+FKLQRSYSSLG L++S +LF++T N
Sbjct: 35  EKLAIIIDKSKSINNLHQIHAFLYRHNLHHHPILSFKLQRSYSSLGHLNHSLTLFNQTQN 94

Query: 289 PNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSCPLELGKSLHAQA 468
           PNVFF+TSIIH H    LH  AL  Y+QMLT  V PNAFTFSSILKSCPLE  + +HAQA
Sbjct: 95  PNVFFYTSIIHAHTFHKLHYQALLFYAQMLTQKVTPNAFTFSSILKSCPLEFAQIIHAQA 154

Query: 469 LKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYAKHGDVDGAR 648
           +K  LD+D YVRT L+DVYARGGD VSAR LFD +PEKSLVS TAMITC+AKHG V  AR
Sbjct: 155 IKFGLDSDLYVRTCLVDVYARGGDFVSARNLFDEIPEKSLVSSTAMITCFAKHGMVKEAR 214

Query: 649 VLFDGVDERDVVC 687
           VLFDG+++RD+VC
Sbjct: 215 VLFDGLEDRDLVC 227



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 44/160 (27%), Positives = 84/160 (52%), Gaps = 4/160 (2%)
 Frame = +1

Query: 193 EQDTILNFKLQRSYSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQ 372
           E+  + +  +   ++  G +  +R LFD   + ++  W  +I G+   GL    L L+ Q
Sbjct: 191 EKSLVSSTAMITCFAKHGMVKEARVLFDGLEDRDLVCWNVMIDGYVQHGLANEGLVLFRQ 250

Query: 373 MLTHGVVPNAFTFSSILKSC----PLELGKSLHAQALKLKLDTDTYVRTSLLDVYARGGD 540
           ML   V P+  T  ++L +C     LE G+ +H+      ++ + +V ++L+D+Y++ G+
Sbjct: 251 MLKDRVRPSEVTVLAVLSACGQIGALESGRWVHSYIQNNGIEINAHVGSALIDMYSKCGN 310

Query: 541 VVSARQLFDTMPEKSLVSLTAMITCYAKHGDVDGARVLFD 660
           +  AR +F+ +  K +V   +M+T YA HG    A  LF+
Sbjct: 311 LEDARLVFERIKYKDVVVWNSMVTGYATHGFSQDALQLFN 350



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/90 (32%), Positives = 48/90 (53%)
 Frame = +1

Query: 163 IHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGL 342
           +H+ +  NG+E +  +   L   YS  G L+ +R +F+R    +V  W S++ G+A  G 
Sbjct: 282 VHSYIQNNGIEINAHVGSALIDMYSKCGNLEDARLVFERIKYKDVVVWNSMVTGYATHGF 341

Query: 343 HQHALFLYSQMLTHGVVPNAFTFSSILKSC 432
            Q AL L+++M   G  P   TF  +L +C
Sbjct: 342 SQDALQLFNEMCGLGYQPTDITFIGVLSAC 371


>emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  255 bits (652), Expect = 8e-66
 Identities = 123/157 (78%), Positives = 141/157 (89%)
 Frame = +1

Query: 217 KLQRSYSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVP 396
           KLQRSY+SLGRLDYS +LF RT NP+VFFWT+IIHGHAL+GLH+ AL  Y+QMLT GV P
Sbjct: 14  KLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEP 73

Query: 397 NAFTFSSILKSCPLELGKSLHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMP 576
           NAFTFSSILK CP+E GK+LH+QA+KL  D+D YVRT LLDVYARGGDVVSA+QLFDTMP
Sbjct: 74  NAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 133

Query: 577 EKSLVSLTAMITCYAKHGDVDGARVLFDGVDERDVVC 687
           EKSLVSLTAM+TCYAKHG++D ARVLFDG++ERD VC
Sbjct: 134 EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 170



 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
 Frame = +1

Query: 232 YSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTF 411
           Y+  G LD +R LFD     +   W  +I G+   G+   AL L+ +ML     PN  T 
Sbjct: 147 YAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTV 206

Query: 412 SSILKSC----PLELGKSLHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPE 579
            S+L +C     LE G+ +H+      +  + +V T+L+D+Y++ G +  AR +FD + +
Sbjct: 207 LSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDD 266

Query: 580 KSLVSLTAMITCYAKHGDVDGARVLF 657
           K +V+  +MI  YA  G    A  LF
Sbjct: 267 KDVVAWNSMIVGYAMXGFSQEALQLF 292



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 30/90 (33%), Positives = 49/90 (54%)
 Frame = +1

Query: 163 IHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGL 342
           +H+ +  NG++ +  +   L   YS  G L+ +R +FD+  + +V  W S+I G+A+ G 
Sbjct: 225 VHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGF 284

Query: 343 HQHALFLYSQMLTHGVVPNAFTFSSILKSC 432
            Q AL L+  M   G+ P   TF  IL +C
Sbjct: 285 SQEALQLFKSMCRMGLHPTNITFIGILSAC 314


>ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
           gi|449513125|ref|XP_004164238.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  247 bits (630), Expect = 3e-63
 Identities = 128/194 (65%), Positives = 150/194 (77%)
 Frame = +1

Query: 106 VDRALFLIDKSKSVRHLLQIHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLFDRTH 285
           V+R   LIDKSKSV HLLQIHA+LLR GL  + ILNFKLQRSY++LGRLD S  +F+   
Sbjct: 47  VERFASLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFD 106

Query: 286 NPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSCPLELGKSLHAQ 465
            PNVF +++IIH H    L   A   YSQML+ GV PNAFTFSS+LKSC LE GK LH Q
Sbjct: 107 EPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQ 166

Query: 466 ALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYAKHGDVDGA 645
           A+KL L +D YVRT L+DVYARGGDVV ARQLFD MPE+SLVSLT M+TCY+K G++D A
Sbjct: 167 AIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKA 226

Query: 646 RVLFDGVDERDVVC 687
           R LF+G+ ERDVVC
Sbjct: 227 RSLFEGMKERDVVC 240



 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 50/151 (33%), Positives = 84/151 (55%), Gaps = 4/151 (2%)
 Frame = +1

Query: 232 YSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTF 411
           YS +G LD +RSLF+     +V  W  +I G+A  G+   +L L+ +ML    +PN  T 
Sbjct: 217 YSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTV 276

Query: 412 SSILKSC----PLELGKSLHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPE 579
            ++L +C     LE G+ +H+      +  + +V T+L+D+Y++ G +  AR +FD + +
Sbjct: 277 LAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRD 336

Query: 580 KSLVSLTAMITCYAKHGDVDGARVLFDGVDE 672
           K +V+  +MI  YA HG    A  LF+ + E
Sbjct: 337 KDVVAWNSMIVGYAMHGFSQHALQLFEEMTE 367



 Score = 62.0 bits (149), Expect(2) = 1e-07
 Identities = 32/90 (35%), Positives = 49/90 (54%)
 Frame = +1

Query: 163 IHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGL 342
           IH+ +   G++ +  +   L   YS  G L+ +R +FDR  + +V  W S+I G+A+ G 
Sbjct: 295 IHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGF 354

Query: 343 HQHALFLYSQMLTHGVVPNAFTFSSILKSC 432
            QHAL L+ +M   G  P   TF  IL +C
Sbjct: 355 SQHALQLFEEMTETGHKPTDITFIGILSAC 384



 Score = 20.4 bits (41), Expect(2) = 1e-07
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +2

Query: 527 HGVEMLFPHANCLIRCLKRVWYL 595
           +G+E    H  C++  L R  +L
Sbjct: 404 YGIEPKIEHYGCMVNLLGRAGHL 426


>ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Glycine max]
          Length = 628

 Score =  238 bits (608), Expect = 1e-60
 Identities = 120/193 (62%), Positives = 142/193 (73%)
 Frame = +1

Query: 109 DRALFLIDKSKSVRHLLQIHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLFDRTHN 288
           D    LID SKS  HLLQIHAALLR GL    ILNFKLQRSY+SLG L +S +LF RT N
Sbjct: 24  DNLALLIDNSKSTHHLLQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPN 83

Query: 289 PNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSCPLELGKSLHAQA 468
           PNVF WT II+ HA   L  HAL  YSQMLTH + PNAFT SS+LK+C L   +++H+ A
Sbjct: 84  PNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACTLHPARAVHSHA 143

Query: 469 LKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYAKHGDVDGAR 648
           +K  L +  YV T L+D YARGGDV SA++LFD MPE+SLVS TAM+TCYAKHG +  AR
Sbjct: 144 IKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEAR 203

Query: 649 VLFDGVDERDVVC 687
           VLF+G+  +DVVC
Sbjct: 204 VLFEGMGMKDVVC 216



 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
 Frame = +1

Query: 232 YSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLT------HGVV 393
           Y+  G L  +R LF+     +V  W  +I G+A  G    AL  + +M+       +G V
Sbjct: 193 YAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKV 252

Query: 394 -PNAFTFSSILKSC----PLELGKSLHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQ 558
            PN  T  ++L SC     LE GK +H+      +  +  V T+L+D+Y + G +  AR+
Sbjct: 253 RPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARK 312

Query: 559 LFDTMPEKSLVSLTAMITCYAKHGDVDGARVLF 657
           +FD M  K +V+  +MI  Y  HG  D A  LF
Sbjct: 313 VFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLF 345


>ref|XP_006466530.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Citrus sinensis]
          Length = 622

 Score =  237 bits (605), Expect = 2e-60
 Identities = 115/199 (57%), Positives = 150/199 (75%)
 Frame = +1

Query: 91  HHLLPVDRALFLIDKSKSVRHLLQIHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSL 270
           H L P +R   +I   KS+ H+L+IHA L R+ L  + ++NF L R+YSSL RL YS +L
Sbjct: 18  HRLPPPNRLAGVISNCKSISHILRIHAVLYRHNLHNEPLINFHLLRAYSSLNRLSYSITL 77

Query: 271 FDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSCPLELGK 450
           F++TH  NVF +T+IIH HA +  ++ ALF YSQML   + PNAFTFSS LKSCPL+ G+
Sbjct: 78  FNQTHKKNVFIYTAIIHCHAQRNSYEQALFYYSQMLIDSIEPNAFTFSSALKSCPLKPGQ 137

Query: 451 SLHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYAKHG 630
           +LH+Q +K  LD D YV TSL+D+YARGGDV+SA +LF TMP++SLVSLT M+TCYAK G
Sbjct: 138 ALHSQTVKFSLDKDLYVSTSLVDLYARGGDVLSAEKLFATMPQRSLVSLTTMLTCYAKQG 197

Query: 631 DVDGARVLFDGVDERDVVC 687
           +V  ARVLFD ++E+DVVC
Sbjct: 198 EVAAARVLFDDMEEKDVVC 216



 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 5/148 (3%)
 Frame = +1

Query: 232 YSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTF 411
           Y+  G +  +R LFD     +V  W  +I G+A  GL   AL L+ +ML   V PN  T 
Sbjct: 193 YAKQGEVAAARVLFDDMEEKDVVCWNVMIDGYAQHGLANEALVLFRRMLAEKVEPNEVTA 252

Query: 412 SSILKSC----PLELGKSLHAQALKLK-LDTDTYVRTSLLDVYARGGDVVSARQLFDTMP 576
            ++L +C     LE G+ +H+     + +  +  V T+L+++Y++ G +  AR +FD + 
Sbjct: 253 VAVLSACGQIGALESGRWIHSYIENSRNIKVNVQVGTALINMYSKCGSLKDARLVFDRVN 312

Query: 577 EKSLVSLTAMITCYAKHGDVDGARVLFD 660
           +K +V   +MI  YA HG    A  LF+
Sbjct: 313 DKDVVVWNSMIVGYAMHGFGKDALQLFN 340


>ref|XP_007155872.1| hypothetical protein PHAVU_003G238900g [Phaseolus vulgaris]
           gi|561029226|gb|ESW27866.1| hypothetical protein
           PHAVU_003G238900g [Phaseolus vulgaris]
          Length = 625

 Score =  237 bits (605), Expect = 2e-60
 Identities = 124/194 (63%), Positives = 146/194 (75%)
 Frame = +1

Query: 106 VDRALFLIDKSKSVRHLLQIHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLFDRTH 285
           VD    LIDKSKS+ HLLQIHAALLR GL    ILNFKLQRSY+SLG L +S +LF+ T 
Sbjct: 23  VDNLALLIDKSKSISHLLQIHAALLRRGLHHHPILNFKLQRSYTSLGLLHHSVTLFNLTP 82

Query: 286 NPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSCPLELGKSLHAQ 465
            PNVF WTSII+ HA  GL   AL  Y+QML H V PNAFT SS+LK C LE    +H+ 
Sbjct: 83  APNVFLWTSIINAHAHSGLCDCALSYYAQMLAHYVQPNAFTLSSLLKGCTLEPTTVVHSH 142

Query: 466 ALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYAKHGDVDGA 645
           A+KL L +D YV TSL+D YARGGDVVSA++LFD MPE+SLVSLTAM+TCYAKHG +  A
Sbjct: 143 AVKLGLSSDLYVSTSLVDAYARGGDVVSAQKLFDAMPERSLVSLTAMLTCYAKHGMLREA 202

Query: 646 RVLFDGVDERDVVC 687
           R+LF+ +  +DVVC
Sbjct: 203 RLLFEEMGVKDVVC 216



 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 8/150 (5%)
 Frame = +1

Query: 232 YSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTF 411
           Y+  G L  +R LF+     +V  W  +I G+A  G    AL L+ +ML   V PN  T 
Sbjct: 193 YAKHGMLREARLLFEEMGVKDVVCWNVMIDGYAQHGCPNEALVLFREMLGKKVRPNEITV 252

Query: 412 SSILKSC----PLELGKSLHA----QALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFD 567
            ++L SC     LE G+ +H+      + + +  +  V T+L+D+Y + G +  AR++FD
Sbjct: 253 LAVLSSCGQLGALECGRWVHSYVENNGVGVGVKVNLRVGTALVDMYCKCGGLDDARKVFD 312

Query: 568 TMPEKSLVSLTAMITCYAKHGDVDGARVLF 657
            M  K +V+  ++I  Y  HG  D A  LF
Sbjct: 313 GMEGKDVVAWNSLIMGYGIHGFGDEALQLF 342


>ref|XP_006426011.1| hypothetical protein CICLE_v10025167mg [Citrus clementina]
           gi|557528001|gb|ESR39251.1| hypothetical protein
           CICLE_v10025167mg [Citrus clementina]
          Length = 622

 Score =  231 bits (590), Expect = 1e-58
 Identities = 114/199 (57%), Positives = 148/199 (74%)
 Frame = +1

Query: 91  HHLLPVDRALFLIDKSKSVRHLLQIHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSL 270
           H L P +R   +I   KS+  +L+IHA L R+ L  + ++NF L R+YSSL RLDYS +L
Sbjct: 18  HRLPPPNRLAGVISNCKSISDVLRIHAVLYRHNLHTEPLINFHLLRAYSSLNRLDYSITL 77

Query: 271 FDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSCPLELGK 450
           F +TH  NVF +T+IIH HA +  ++ ALF YSQML   + PNAFTFSS L SCPL+ G+
Sbjct: 78  FHQTHKKNVFIYTAIIHCHAQRNSYEQALFYYSQMLIDNIEPNAFTFSSALISCPLKPGQ 137

Query: 451 SLHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYAKHG 630
           +LH+Q +K  LD D YV TSL+D+YARGGDV+SA +LF TMP++SLVSLT M+TCYAK G
Sbjct: 138 ALHSQTVKFSLDKDLYVSTSLVDLYARGGDVLSAEKLFATMPQRSLVSLTTMLTCYAKQG 197

Query: 631 DVDGARVLFDGVDERDVVC 687
           +V  ARVLFD ++E+DVVC
Sbjct: 198 EVAAARVLFDDMEEKDVVC 216



 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 5/148 (3%)
 Frame = +1

Query: 232 YSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTF 411
           Y+  G +  +R LFD     +V  W  +I G+A  GL   AL L+ +ML   V PN  T 
Sbjct: 193 YAKQGEVAAARVLFDDMEEKDVVCWNVMIDGYAQHGLANEALVLFRRMLAEKVEPNEVTA 252

Query: 412 SSILKSC----PLELGKSLHAQALKLK-LDTDTYVRTSLLDVYARGGDVVSARQLFDTMP 576
            ++L +C     LE G+ +H+     + +  +  V T+L+++Y++ G +  AR +FD + 
Sbjct: 253 VAVLSACGQIGALESGRWIHSYIENSRNIKVNVQVGTALINMYSKCGSLKDARLVFDRVN 312

Query: 577 EKSLVSLTAMITCYAKHGDVDGARVLFD 660
           +K +V   +MI  YA HG    A  LF+
Sbjct: 313 DKDVVVWNSMIVGYAMHGFGKDALQLFN 340


>ref|XP_004509094.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cicer arietinum]
          Length = 632

 Score =  223 bits (569), Expect = 4e-56
 Identities = 117/202 (57%), Positives = 138/202 (68%), Gaps = 4/202 (1%)
 Frame = +1

Query: 94  HLLPVDRALFLIDKSKSVRHLLQIHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLF 273
           H   V     LID+SKS  HLLQIHA L+R GL+   ILNFKLQR YS++G L YS SLF
Sbjct: 24  HSSKVHTLAHLIDRSKSKNHLLQIHAILIRRGLDDHPILNFKLQRRYSTVGHLHYSVSLF 83

Query: 274 DRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSCPLELGKS 453
           + T NPNV+ WTSIIH H    L+  AL  Y QMLTH V PNAFTFSS+L    L+  K+
Sbjct: 84  NITRNPNVYTWTSIIHAHTQSNLNDKALSYYFQMLTHNVQPNAFTFSSLLNGITLQPTKA 143

Query: 454 LHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYAKHGD 633
           +H   +K  L +D+YV T L+D YARGGDV SA +LFD MPE+SLVSLT M+TCY KHG 
Sbjct: 144 IHCHVIKFGLCSDSYVATGLVDGYARGGDVFSAEKLFDKMPERSLVSLTTMLTCYTKHGK 203

Query: 634 VDGARVLFD----GVDERDVVC 687
           +  AR LFD    G  +RDVVC
Sbjct: 204 LREARSLFDEMEVGGSDRDVVC 225



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 10/152 (6%)
 Frame = +1

Query: 232 YSSLGRLDYSRSLFDRTH----NPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPN 399
           Y+  G+L  +RSLFD       + +V  W  +I G+A  G    +L L+ +ML   V PN
Sbjct: 198 YTKHGKLREARSLFDEMEVGGSDRDVVCWNVMIDGYASNGFPNESLLLFRKMLVEKVRPN 257

Query: 400 AFTFSSILKSC----PLELGKSLHA--QALKLKLDTDTYVRTSLLDVYARGGDVVSARQL 561
             T  ++L SC     L+ G+ +H+  +  K  L  +  V T+L+D+Y +   +  AR++
Sbjct: 258 EITLVAVLSSCGQLGTLDSGRWVHSYIENEKNGLGVEVRVGTALVDMYCKCASLEDARKV 317

Query: 562 FDTMPEKSLVSLTAMITCYAKHGDVDGARVLF 657
           F+ +  K +V+  +MI   A +G  + A  LF
Sbjct: 318 FEKIDGKDVVAWNSMIMGCAVNGFSEEAFELF 349


>ref|NP_195454.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g37380, chloroplastic; Flags: Precursor
           gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis
           thaliana] gi|7270720|emb|CAB80403.1| putative protein
           [Arabidopsis thaliana] gi|332661386|gb|AEE86786.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 632

 Score =  199 bits (506), Expect = 7e-49
 Identities = 103/199 (51%), Positives = 142/199 (71%), Gaps = 3/199 (1%)
 Frame = +1

Query: 97  LLPVDRALFLIDKSKSVRHLLQIHAALLRNGL---EQDTILNFKLQRSYSSLGRLDYSRS 267
           L P ++   LIDKS+SV  +LQIHAA+LR+ L    +  +LN KL R+Y+S G++ +S +
Sbjct: 26  LPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLA 85

Query: 268 LFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSCPLELG 447
           LF +T +P++F +T+ I+  ++ GL   A  LY Q+L+  + PN FTFSS+LKSC  + G
Sbjct: 86  LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSG 145

Query: 448 KSLHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYAKH 627
           K +H   LK  L  D YV T L+DVYA+GGDVVSA+++FD MPE+SLVS TAMITCYAK 
Sbjct: 146 KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQ 205

Query: 628 GDVDGARVLFDGVDERDVV 684
           G+V+ AR LFD + ERD+V
Sbjct: 206 GNVEAARALFDSMCERDIV 224



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 5/161 (3%)
 Frame = +1

Query: 193 EQDTILNFKLQRSYSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQ 372
           E+  + +  +   Y+  G ++ +R+LFD     ++  W  +I G+A  G    AL L+ +
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248

Query: 373 MLTHGVV-PNAFTFSSILKSCP----LELGKSLHAQALKLKLDTDTYVRTSLLDVYARGG 537
           +L  G   P+  T  + L +C     LE G+ +H      ++  +  V T L+D+Y++ G
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308

Query: 538 DVVSARQLFDTMPEKSLVSLTAMITCYAKHGDVDGARVLFD 660
            +  A  +F+  P K +V+  AMI  YA HG    A  LF+
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFN 349


>ref|XP_006282456.1| hypothetical protein CARUB_v10004360mg [Capsella rubella]
           gi|482551161|gb|EOA15354.1| hypothetical protein
           CARUB_v10004360mg [Capsella rubella]
          Length = 633

 Score =  197 bits (502), Expect = 2e-48
 Identities = 103/199 (51%), Positives = 140/199 (70%), Gaps = 3/199 (1%)
 Frame = +1

Query: 97  LLPVDRALFLIDKSKSVRHLLQIHAALLRNGL---EQDTILNFKLQRSYSSLGRLDYSRS 267
           L P ++   LIDKSKSV  LLQIHA +LR+ L    +  +LN KL R+Y+S G++ ++  
Sbjct: 27  LPPPEKLAVLIDKSKSVDELLQIHATILRHSLLLHPRYPVLNLKLHRAYASHGKIRHALD 86

Query: 268 LFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSCPLELG 447
           LF  T +P++F +T+ I+  ++ GLH  A  LY Q+L+  +VPN FTFSSILKSC  +  
Sbjct: 87  LFHHTIDPDLFIFTAAINTASINGLHDEAFLLYIQLLSSEIVPNEFTFSSILKSCSTDSV 146

Query: 448 KSLHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYAKH 627
           K++H+  LK  L  D YV T L+DVYA+GG V+SA+++FD M E+SLVS TAMITCYAK 
Sbjct: 147 KAIHSHVLKFGLGLDPYVATGLVDVYAKGGYVISAQKVFDRMSERSLVSSTAMITCYAKQ 206

Query: 628 GDVDGARVLFDGVDERDVV 684
           G+VD AR LFD + ERD+V
Sbjct: 207 GNVDAARALFDRMCERDIV 225



 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
 Frame = +1

Query: 193 EQDTILNFKLQRSYSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQ 372
           E+  + +  +   Y+  G +D +R+LFDR    ++  W  +I G+A  G    AL L+ +
Sbjct: 190 ERSLVSSTAMITCYAKQGNVDAARALFDRMCERDIVSWNVMIDGYAQHGFPSDALMLFQK 249

Query: 373 MLTHGVV-PNAFTFSSILKSCP----LELGKSLHAQALKLKLDTDTYVRTSLLDVYARGG 537
           +L  G   P+  T  + L +C     LE G+ +H    K ++  +  V T+L+D+Y++ G
Sbjct: 250 LLAGGTPKPDEITVVATLSACSQIGALETGRWIHVFIKKNRIRLNVKVCTALIDMYSKCG 309

Query: 538 DVVSARQLFDTMPEKSLVSLTAMITCYAKHGDVDGARVLFD 660
            +  A  +F+  P K +V+  AMI  YA HG    A  LFD
Sbjct: 310 SLEEASLVFNDTPRKDIVAWNAMIAGYALHGYSQDALKLFD 350


>ref|XP_006844317.1| hypothetical protein AMTR_s00143p00072540 [Amborella trichopoda]
           gi|548846750|gb|ERN05992.1| hypothetical protein
           AMTR_s00143p00072540 [Amborella trichopoda]
          Length = 227

 Score =  196 bits (497), Expect = 8e-48
 Identities = 102/190 (53%), Positives = 136/190 (71%), Gaps = 5/190 (2%)
 Frame = +1

Query: 94  HLLPVDRALFLIDKSKSVRHLLQIHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSLF 273
           HL   DR   L+   K+  HL+QIHA++LRNGL+++ +L FKL RSYSS G ++ +R LF
Sbjct: 37  HLQLPDRIKLLLGSCKTASHLVQIHASILRNGLDRNPLLQFKLLRSYSSSGLVNQARLLF 96

Query: 274 DRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSCPLEL--- 444
           D+ H PNVFFWT+II G AL GL++ A+ LY QM   GV PNA+TFSS+LK+  +EL   
Sbjct: 97  DQVHEPNVFFWTAIIRGCALNGLYKEAILLYYQMQDGGVEPNAYTFSSLLKAFSMELLVR 156

Query: 445 -GKSLHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYA 621
            G++ H   LKL+L  D++V++SL+D+YAR G + +ARQLFD M  KS+VS TAMITCY 
Sbjct: 157 EGEAAHGHVLKLQLGDDSFVQSSLIDMYARFGKLEAARQLFDQMLHKSIVSYTAMITCYT 216

Query: 622 KHGD-VDGAR 648
           K G+  DG R
Sbjct: 217 KRGENEDGMR 226


>ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312787|gb|EFH43210.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 630

 Score =  194 bits (493), Expect = 2e-47
 Identities = 100/197 (50%), Positives = 138/197 (70%), Gaps = 3/197 (1%)
 Frame = +1

Query: 103 PVDRALFLIDKSKSVRHLLQIHAALLRNGL---EQDTILNFKLQRSYSSLGRLDYSRSLF 273
           P ++    ID S SV  +LQIHAA+LR+ L    +  +LN KL R+Y+S G++ +S +LF
Sbjct: 26  PPEKLAVFIDNSHSVDEVLQIHAAILRHNLLIHPRYPVLNLKLHRAYASHGKIRHSLALF 85

Query: 274 DRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSCPLELGKS 453
            +T +P++F +T+ I+  ++ GL   A  LY Q+L+  + PN FTFSSILKSC  + GK 
Sbjct: 86  HQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFTFSSILKSCSTKSGKL 145

Query: 454 LHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYAKHGD 633
           +H   LK  L  D YV T L+D+YA+GGDVVSA+++FD MPE+SLVS TAMITCYAK G+
Sbjct: 146 IHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGN 205

Query: 634 VDGARVLFDGVDERDVV 684
           V+ AR LFD + ERD+V
Sbjct: 206 VEAARALFDRMCERDIV 222



 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
 Frame = +1

Query: 193 EQDTILNFKLQRSYSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQ 372
           E+  + +  +   Y+  G ++ +R+LFDR    ++  W  +I G++  G    AL L+ +
Sbjct: 187 ERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQK 246

Query: 373 MLTHGVV-PNAFTFSSILKSCP----LELGKSLHAQALKLKLDTDTYVRTSLLDVYARGG 537
           +L  G   P+  T  + L +C     LE G+ +H      ++  +  V T+L+D+Y++ G
Sbjct: 247 LLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCG 306

Query: 538 DVVSARQLFDTMPEKSLVSLTAMITCYAKHGDVDGARVLFD 660
            +  A  +F+  P K +V+  AMIT YA HG    A  LFD
Sbjct: 307 SLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFD 347


>dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  191 bits (485), Expect = 2e-46
 Identities = 96/200 (48%), Positives = 133/200 (66%), Gaps = 1/200 (0%)
 Frame = +1

Query: 91  HHLLPVDRALFLIDKSKSVRHLLQIHAALLRNGLEQDTILNFKLQRSYSSLGRLDYSRSL 270
           H  L  DRA  L+    + R   ++HAA++R GL+ D  + F+LQR+Y++ GRLD+S +L
Sbjct: 19  HGALTADRAASLLAACSTARRASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTL 78

Query: 271 FDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFTFSSILKSC-PLELG 447
             RT +P   F+TS IH H+ +GLH   L L S ML+ G++P A T S+ L +C  L LG
Sbjct: 79  LGRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACRGLSLG 138

Query: 448 KSLHAQALKLKLDTDTYVRTSLLDVYARGGDVVSARQLFDTMPEKSLVSLTAMITCYAKH 627
           ++LHA A KL L  D+YV T+LL +YAR GD  +AR LFD MP+  +VS+TAM+TCYA  
Sbjct: 139 RALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANM 198

Query: 628 GDVDGARVLFDGVDERDVVC 687
           G +D AR LFDG+  +D +C
Sbjct: 199 GALDDARRLFDGLPRKDFIC 218



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
 Frame = +1

Query: 232 YSSLGRLDYSRSLFDRTHNPNVFFWTSIIHGHALQGLHQHALFLYSQMLTHGVVPNAFT- 408
           Y+++G LD +R LFD     +   W ++I G+   G    AL L+ +ML     P+  T 
Sbjct: 195 YANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTV 254

Query: 409 ---FSSILKSCPLELGKSLHAQALKLK-LDTDTYVRTSLLDVYARGGDVVSARQLFDTMP 576
               S++ +   +E GK LH+     + +  +  V T+L+D+Y + G +  A  +F  + 
Sbjct: 255 VLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIG 314

Query: 577 EKSLVSLTAMITCYAKHGDVDGARVLF 657
            K +V   AMI  YA HGD   A  +F
Sbjct: 315 NKDIVVWNAMINGYAMHGDSRKALEMF 341