BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00036433
         (1299 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17752.3| unnamed protein product [Vitis vinifera]              627   e-177
gb|EYU42962.1| hypothetical protein MIMGU_mgv1a021045mg [Mimulus...   587   e-165
ref|XP_006345374.1| PREDICTED: pentatricopeptide repeat-containi...   580   e-163
ref|XP_002304774.1| pentatricopeptide repeat-containing family p...   577   e-162
ref|XP_007220734.1| hypothetical protein PRUPE_ppa023145mg [Prun...   573   e-161
ref|XP_007008770.1| Pentatricopeptide repeat (PPR-like) superfam...   568   e-159
gb|EXC10461.1| hypothetical protein L484_008628 [Morus notabilis]     563   e-158
ref|XP_003598903.1| Pentatricopeptide repeat-containing protein ...   562   e-157
ref|XP_004494981.1| PREDICTED: pentatricopeptide repeat-containi...   558   e-156
ref|XP_004515007.1| PREDICTED: pentatricopeptide repeat-containi...   556   e-156
ref|XP_006605814.1| PREDICTED: pentatricopeptide repeat-containi...   556   e-156
ref|XP_004511291.1| PREDICTED: pentatricopeptide repeat-containi...   549   e-154
ref|XP_006413862.1| hypothetical protein EUTSA_v10024515mg [Eutr...   538   e-150
ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containi...   538   e-150
ref|XP_007149018.1| hypothetical protein PHAVU_005G033500g [Phas...   536   e-150
ref|XP_006482966.1| PREDICTED: pentatricopeptide repeat-containi...   535   e-149
ref|XP_006438906.1| hypothetical protein CICLE_v10030824mg [Citr...   531   e-148
ref|XP_004140286.1| PREDICTED: pentatricopeptide repeat-containi...   531   e-148
ref|NP_193806.1| pentatricopeptide repeat-containing protein [Ar...   524   e-146
ref|XP_006283187.1| hypothetical protein CARUB_v10004218mg, part...   521   e-145

>emb|CBI17752.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  627 bits (1618), Expect = e-177
 Identities = 302/422 (71%), Positives = 353/422 (83%), Gaps = 3/422 (0%)
 Frame = +1

Query: 43   MPPKSQPSTITNKLYFYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYKSSKTLNPNQCS 222
            MPP+ QP    +K YF+YGHRKPSQNRPTVHGGLFSNR  +NP P       TL      
Sbjct: 1    MPPQPQPPK-PHKFYFFYGHRKPSQNRPTVHGGLFSNRTTLNPKP------PTLQNPTTH 53

Query: 223  IDINKWDPNSPQKF--PPTKTQSEKFFSIAQTLSPIARYICDSFRKHKNWCPSIVKDLDK 396
             ++  WDP+SP+    PP+KT  E+FF IA+ LSPIARYICDSFRKH+NW P +V DL+K
Sbjct: 54   FNLQNWDPDSPKALAIPPSKTPCERFFDIAKNLSPIARYICDSFRKHRNWGPPVVADLNK 113

Query: 397  LRRVPPNLVAEVLKAQTDPRISSRFFHWAGKQKGFRHNFASYNAFAYCLNRLNMFRAADQ 576
            LRRV P LVAEVLK QTDP I S+FFHWAGKQKG++HNFASYNAFAYCLNR N FRAADQ
Sbjct: 114  LRRVTPVLVAEVLKVQTDPVICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAADQ 173

Query: 577  VPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLYNRILDALV 756
            VP+LM MQG  P+EKQFEILIRMH DA RGLRVYY+YEKMK FG+KPRVFLYNRI+D LV
Sbjct: 174  VPELMNMQGKPPSEKQFEILIRMHIDANRGLRVYYVYEKMKKFGIKPRVFLYNRIMDGLV 233

Query: 757  KTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMR-NLCKPDVC 933
            KTGH+DLA+SVYEDFKEDGLVEESVT+MILVKGLCK GR++EV E+L RMR NLCKPDV 
Sbjct: 234  KTGHLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKAGRIDEVLELLDRMRGNLCKPDVF 293

Query: 934  AYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKEM 1113
            AYTAM+++LV+EGNLDGCLR+WEEM+ D V+PDVMAYTTLV  LC GN+V +G+E FKEM
Sbjct: 294  AYTAMVKVLVAEGNLDGCLRVWEEMRKDKVEPDVMAYTTLVAALCNGNRVGEGFELFKEM 353

Query: 1114 REKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGLCNANRV 1293
            ++K  LIDR++YGSLIE FVV+ ++G ACDLLKDL+DSGYRADL+IY+S+IEG+CN  +V
Sbjct: 354  KQKKYLIDRAIYGSLIEGFVVNERVGSACDLLKDLMDSGYRADLAIYNSLIEGMCNVKQV 413

Query: 1294 DK 1299
            DK
Sbjct: 414  DK 415



 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 41/171 (23%), Positives = 81/171 (47%), Gaps = 2/171 (1%)
 Frame = +1

Query: 682  IYEKMKNFGVKPRVFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLC 861
            ++E +K  G    + +YN +++A+ +TG V  A+S+++D K+     +S T+   +    
Sbjct: 489  VFEHLKAKGYCS-ISIYNILMEAIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICFV 547

Query: 862  KVGRMNEVFEILSRMRNLCK-PDVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVD-PDV 1035
            +VG + E     +++  +C+ P V AY ++++ L     +D  + +  +   +    P  
Sbjct: 548  EVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGPME 607

Query: 1036 MAYTTLVTGLCKGNKVEKGYEFFKEMREKGCLIDRSMYGSLIEAFVVDGKI 1188
              YT  +   CK    EK  +   EM ++GC  D   Y +LI      G +
Sbjct: 608  FKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALISGMCKHGTL 658



 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 2/176 (1%)
 Frame = +1

Query: 625  FEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLYNRILDALVKTGHVDLAISVYEDFK 804
            + IL+      G   +   +++ +K+   KP    Y+  +   V+ G V  A + Y    
Sbjct: 504  YNILMEAIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICFVEVGDVQEACACYNKII 563

Query: 805  EDGLVEESVTFMILVKGLCKVGRMNEVFEILSR-MRNLCK-PDVCAYTAMIRILVSEGNL 978
            E   +     +  LVKGLCK   ++    ++   + N+   P    YT  I      GN 
Sbjct: 564  EMCQLPSVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGPMEFKYTLTILHACKSGNA 623

Query: 979  DGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKEMREKGCLIDRSM 1146
            +  + +  EM  +G  PD + Y+ L++G+CK   +E+  + F  MRE+  L + ++
Sbjct: 624  EKVIDVLNEMMQEGCTPDEVTYSALISGMCKHGTLEEARKVFSNMRERKLLTEANV 679


>gb|EYU42962.1| hypothetical protein MIMGU_mgv1a021045mg [Mimulus guttatus]
          Length = 726

 Score =  587 bits (1512), Expect = e-165
 Identities = 284/426 (66%), Positives = 350/426 (82%), Gaps = 7/426 (1%)
 Frame = +1

Query: 43   MPPKSQPS---TITNKLYFYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYKSSKTLNPN 213
            MPP S P    T  NK YF+YGHRKP+Q+RPTV GGLFSNR+ +NP  NF + +    P 
Sbjct: 1    MPPPSPPPGALTKPNKPYFFYGHRKPTQSRPTVRGGLFSNRQTVNPE-NFRRRTAAHEP- 58

Query: 214  QCSIDINKWDPNSP--QKFPPTKTQSEKFFSIAQTLSPIARYICDSFRKHKNWCPSIVKD 387
                D+ KWDP+    +K P  K  SEKFFS+A+ LSPIARYI D+FRKHK W P +V++
Sbjct: 59   ---FDLQKWDPDDEANRKPPYGKDPSEKFFSLAKNLSPIARYIVDAFRKHKQWSPQLVQE 115

Query: 388  LDKLRRVPPNLVAEVLK-AQTDPRISSRFFHWAGKQKGFRHNFASYNAFAYCLNRLNMFR 564
            L++LRRV P LV EVLK    DPR+SS+FFHWAGKQKG++H+FA YNA+AY LNR N FR
Sbjct: 116  LNRLRRVTPTLVTEVLKFPDVDPRVSSKFFHWAGKQKGYKHDFACYNAYAYFLNRSNHFR 175

Query: 565  AADQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLYNRIL 744
             ADQ+P+LM MQG  PTEKQFEILIRMH+D+ RGLRV+Y+YEKMK FGVKPRVFLYNRI+
Sbjct: 176  EADQLPELMHMQGKPPTEKQFEILIRMHADSNRGLRVHYVYEKMKKFGVKPRVFLYNRIM 235

Query: 745  DALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMR-NLCK 921
            DALVKT H+DLA+SVY DFKE+GL EE+VT+MIL+KGLCK GR++E+F+++ RMR NLCK
Sbjct: 236  DALVKTNHLDLAMSVYRDFKEEGLSEENVTYMILIKGLCKAGRLDEMFDLVDRMRKNLCK 295

Query: 922  PDVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEF 1101
            PDV AYTAM+++LVSEGNL+GCL +WEEMK DGV+PD MAY+TL+  LC+G  V+KGYE 
Sbjct: 296  PDVFAYTAMVKVLVSEGNLNGCLTVWEEMKKDGVEPDSMAYSTLIMALCEGKFVDKGYEL 355

Query: 1102 FKEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGLCN 1281
            FKEM+ + CLIDR++YGSLIEA+VVDGK+G ACDLLKDLI+SGYRADL+IY+S+I+GLCN
Sbjct: 356  FKEMKGRNCLIDRAIYGSLIEAYVVDGKVGSACDLLKDLINSGYRADLAIYNSLIKGLCN 415

Query: 1282 ANRVDK 1299
            +  VD+
Sbjct: 416  SKLVDR 421



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 57/270 (21%), Positives = 113/270 (41%), Gaps = 8/270 (2%)
 Frame = +1

Query: 481  AGKQKGFRHNFASYNAFAYCLNRLNMFRAADQVPDLMRMQG---NQPTEKQFEILIRMHS 651
            A  ++  + +F + N    C   L       ++ + M   G   N+     F  ++  + 
Sbjct: 428  AAIREDLQPDFNTVNPILICYAELKKLHDFCKLLEQMEKLGFSINESLLDFFSCVVETND 487

Query: 652  DAGRGLRVYYIYEKMKNFGVKPRVFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESV 831
                 L V+  + K++N+   P   +YN ++DAL K G    A+ ++ + K+  L  +S 
Sbjct: 488  GVATALEVFE-FLKIRNYINVP---IYNILMDALFKNGDEKKALLLFHELKDADLAPDSS 543

Query: 832  TFMILVKGLCKVGRMNEVFEILSRMRNLCK-PDVCAYTAMIRILVSEGNLDGCLRIWEE- 1005
            T  I +    K+G + E     + ++ +   P + AY A+++ L   G +D  + +  + 
Sbjct: 544  TLCIAISCYIKIGDVREACNTYNTIKEMSSVPSLDAYYALVKGLSDIGEVDAAMVLVRDC 603

Query: 1006 -MKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKEMREKGCLIDRSMYGSLIEAFVVDG 1182
               + G  P    Y   +  +CK N   K  E   EM E+GC        +++      G
Sbjct: 604  LAHVTG-GPMEFKYALTIIHVCKSNDARKVIEVVGEMAEQGCTPSSITCTAVVYGMCKHG 662

Query: 1183 KIGLACDLLKDLIDSGY--RADLSIYSSMI 1266
             I  A ++   + +S +   AD+ +Y   +
Sbjct: 663  SIEEARNVFLSMRESKFITEADVIVYDEFL 692


>ref|XP_006345374.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
            [Solanum tuberosum]
          Length = 720

 Score =  580 bits (1495), Expect = e-163
 Identities = 283/421 (67%), Positives = 343/421 (81%), Gaps = 2/421 (0%)
 Frame = +1

Query: 43   MPPKSQPSTITNKLYFYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYKSSKTLNPNQCS 222
            MPPKS  S    K YF+YGHRKP+Q+RPTV GGLFSNR+ INPN     S  ++   Q  
Sbjct: 1    MPPKSAQS----KPYFFYGHRKPTQHRPTVQGGLFSNRQTINPNRTTKNSPSSVT--QGD 54

Query: 223  IDINKWDPNSPQKFPPTKTQSEKFFSIAQTLSPIARYICDSFRKHKNWCPSIVKDLDKLR 402
              + KWDP+       ++  S++FFS+AQ LSPIARYI DSFRKH NW   ++ DL+ LR
Sbjct: 55   FQLQKWDPDGVSG-QQSRDPSQEFFSLAQRLSPIARYIVDSFRKHGNWGAPLLADLNSLR 113

Query: 403  RVPPNLVAEVLK-AQTDPRISSRFFHWAGKQKGFRHNFASYNAFAYCLNRLNMFRAADQV 579
            RV P LV EVLK    DP+ISS+FF+WAGKQKG+RH+F+ YNAFAY LNR N FR ADQV
Sbjct: 114  RVTPKLVTEVLKHPNLDPKISSKFFYWAGKQKGYRHDFSCYNAFAYGLNRANQFRTADQV 173

Query: 580  PDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLYNRILDALVK 759
            P+LM MQG  P+EKQFEILIRMH DA RGLRVYY+YEKMK FGVKPRVFLYNRI+DALVK
Sbjct: 174  PELMHMQGKPPSEKQFEILIRMHGDANRGLRVYYVYEKMKKFGVKPRVFLYNRIMDALVK 233

Query: 760  TGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMR-NLCKPDVCA 936
            T H+D+A+SVY+DFK+DGLVEES+TFMIL+KGLCK+GRM+EVFE+L RMR N CKPDV A
Sbjct: 234  TNHLDMAMSVYDDFKKDGLVEESMTFMILIKGLCKLGRMDEVFELLGRMRENRCKPDVFA 293

Query: 937  YTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKEMR 1116
            YTAM++ILV+E NLDGC ++W+EM+ D V+PDV+AY+T + GLCK N+V+KGYE FKEM+
Sbjct: 294  YTAMVKILVAERNLDGCSKVWKEMQQDAVEPDVIAYSTFIAGLCKNNQVDKGYELFKEMK 353

Query: 1117 EKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGLCNANRVD 1296
            +K  LIDR +YGSLIE+FV +GK+GLACDLLKDLI+SGYRADL+IY+S+IEGLCNA R D
Sbjct: 354  QKNILIDRGIYGSLIESFVANGKVGLACDLLKDLIESGYRADLAIYNSIIEGLCNAKRTD 413

Query: 1297 K 1299
            +
Sbjct: 414  R 414



 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 38/197 (19%), Positives = 85/197 (43%), Gaps = 2/197 (1%)
 Frame = +1

Query: 625  FEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLYNRILDALVKTGHVDLAISVYEDFK 804
            + IL+      G   +   ++ ++++   +P    Y+  +   V+ G V  A   Y   K
Sbjct: 503  YNILMEALYQNGEVNKALTLFSELRSSDYEPDSSAYSNAVQCFVEVGDVQEASICYNRIK 562

Query: 805  EDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMRNLCKPDVCAYTAMIRIL--VSEGNL 978
            E  L+     +  LV GLCK+G+++    ++             +  ++ I+      + 
Sbjct: 563  EMSLIPSVAAYRSLVIGLCKIGQIDPAMMLIRDCLGNVASGPIEFKCILTIIHVCKMNDA 622

Query: 979  DGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKEMREKGCLIDRSMYGSL 1158
            +  +++ +E+  +G  PD   Y  ++ G+CK   +E+  + F  MR++  L +  +   +
Sbjct: 623  EKVMKVLDELLEEGFSPDNAVYCAVIYGMCKHGTIEEAQKVFASMRKRKHLTEADLV--V 680

Query: 1159 IEAFVVDGKIGLACDLL 1209
             +  ++D       DLL
Sbjct: 681  YDEMLIDHMKKKTADLL 697


>ref|XP_002304774.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|222842206|gb|EEE79753.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 728

 Score =  577 bits (1488), Expect = e-162
 Identities = 282/428 (65%), Positives = 338/428 (78%), Gaps = 7/428 (1%)
 Frame = +1

Query: 37   PQMPPKSQPSTITNKLYFYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYKSSKTLNPNQ 216
            P  PP S+P     K YF+YGHRKPSQNRP V GGLF+NR+ + P P        + P +
Sbjct: 5    PPPPPPSKPL----KPYFFYGHRKPSQNRPVVRGGLFTNRQTVKPQP----PKNPITPFK 56

Query: 217  CSIDINKWDP-----NSPQKFPPTKTQSEKFFSIAQTLSPIARYICDSFRKHKN-WCPSI 378
               D++KWDP     + PQ   P   +S    +++Q LSPIAR+I D+FRK++N W P +
Sbjct: 57   -PFDLHKWDPQQNLPHQPQPSKPQSPRSRHSLALSQRLSPIARFILDAFRKNRNQWGPEV 115

Query: 379  VKDLDKLRRVPPNLVAEVLKAQTDPRISSRFFHWAGKQKGFRHNFASYNAFAYCLNRLNM 558
            V +L KLRRV P+LVAEVLK + +P+++++FFHWAGKQKGF+H FASYNAFAY LNR N 
Sbjct: 116  VTELCKLRRVTPDLVAEVLKVENNPQLATKFFHWAGKQKGFKHTFASYNAFAYNLNRSNF 175

Query: 559  FRAADQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLYNR 738
            FRAADQ+P+LM  QG  PTEKQFEILIRMHSDA RGLRVYY+Y+KM  FGVKPRVFLYNR
Sbjct: 176  FRAADQLPELMEAQGKPPTEKQFEILIRMHSDANRGLRVYYVYQKMVKFGVKPRVFLYNR 235

Query: 739  ILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMR-NL 915
            I+D+L+KTGH+DLA+SVYEDF+ DGLVEESVT+MIL+KGLCK GR+ E+ E+L RMR NL
Sbjct: 236  IMDSLIKTGHLDLALSVYEDFRRDGLVEESVTYMILIKGLCKAGRIEEMMEVLGRMRENL 295

Query: 916  CKPDVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGY 1095
            CKPDV AYTAM+R L  EGNLD CLR+WEEMK DGV+PDVMAY TLVT LCKG +V+KGY
Sbjct: 296  CKPDVFAYTAMVRALAGEGNLDACLRVWEEMKRDGVEPDVMAYVTLVTALCKGGRVDKGY 355

Query: 1096 EFFKEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGL 1275
            E FKEM+ +  LIDR +YG L+EAFV DGKIGLACDLLKDL+DSGYRADL IY+S+IEG 
Sbjct: 356  EVFKEMKGRRILIDRGIYGILVEAFVADGKIGLACDLLKDLVDSGYRADLRIYNSLIEGF 415

Query: 1276 CNANRVDK 1299
            CN  RVDK
Sbjct: 416  CNVKRVDK 423



 Score = 61.6 bits (148), Expect = 7e-07
 Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 4/172 (2%)
 Frame = +1

Query: 775  LAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMRNLCKPDVCAYTAMIR 954
            +A+ V+ED K  G     + + IL++ L  +G M     +   M++L KPD   Y+  I 
Sbjct: 493  MALEVFEDLKVKGYSSVPI-YNILMEALLTIGEMKRALSLFGEMKDLNKPDSTTYSIAII 551

Query: 955  ILVSEGNL-DGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKEMR---EK 1122
              V +GN+ + C+   + +++  V P V AY +L  GLC   +++      ++     E 
Sbjct: 552  CFVEDGNIQEACVSHNKIVEMFCV-PSVAAYCSLAKGLCDNGEIDAAMMLVRDCLASVES 610

Query: 1123 GCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGLC 1278
            G +     Y   I      G      D+L +++  G   +  IYS++I G+C
Sbjct: 611  GPM--EFKYSLTILHACKTGGAEKVIDVLNEMMQEGCTPNEVIYSAIISGMC 660


>ref|XP_007220734.1| hypothetical protein PRUPE_ppa023145mg [Prunus persica]
            gi|462417196|gb|EMJ21933.1| hypothetical protein
            PRUPE_ppa023145mg [Prunus persica]
          Length = 721

 Score =  573 bits (1477), Expect = e-161
 Identities = 283/421 (67%), Positives = 340/421 (80%), Gaps = 2/421 (0%)
 Frame = +1

Query: 43   MPPKSQPSTITNKLYFYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYKSSKTLNPNQCS 222
            MPP+S P    N   F++GHRKPSQNRP V GGLFSNR  + PN  +  ++    P    
Sbjct: 1    MPPQSPPPKPQN-FTFFHGHRKPSQNRPRVRGGLFSNRVSL-PNRRYPIAAPQPQP---- 54

Query: 223  IDINKWDPNSPQKFPPTKTQSEKFFSIAQTLSPIARYICDSFRKHKN-WCPSIVKDLDKL 399
             +++KWDP+ PQ  P T + +    ++   LSPIAR+I D+FRK++N W P +V +L KL
Sbjct: 55   FELSKWDPHLPQSSPSTSSSNPADTTLLSFLSPIARFILDAFRKNQNHWGPPVVSELRKL 114

Query: 400  RRVPPNLVAEVLKAQTDPRISSRFFHWAGKQKGFRHNFASYNAFAYCLNRLNMFRAADQV 579
            RRV P+LVAEVLK Q DP  +S+FFHWAGKQKGF+H +ASYNA AYCLNR N FR+ADQV
Sbjct: 115  RRVTPDLVAEVLKVQNDPVSASKFFHWAGKQKGFKHTYASYNALAYCLNRSNRFRSADQV 174

Query: 580  PDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLYNRILDALVK 759
            P+LM  QG  P+EKQFEILIRMHSDA RGLRVYY+YEKMK FGVKPRVFLYNRI+DALVK
Sbjct: 175  PELMDSQGKPPSEKQFEILIRMHSDANRGLRVYYVYEKMKKFGVKPRVFLYNRIMDALVK 234

Query: 760  TGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMR-NLCKPDVCA 936
            +G++DLA+SVYEDF+ DGLVEESVTFMIL+KGLCK+GRM+E+ ++L RMR NLCKPDV A
Sbjct: 235  SGYLDLALSVYEDFRGDGLVEESVTFMILIKGLCKMGRMDEMLQLLERMRVNLCKPDVFA 294

Query: 937  YTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKEMR 1116
            YTAM+++L+SEGNLDGCLR+WEEMK D V  DVMAY TLVTGLCKG +VEKGY+ F+EM+
Sbjct: 295  YTAMVKVLISEGNLDGCLRVWEEMKRDRVGADVMAYATLVTGLCKGGRVEKGYKLFREMK 354

Query: 1117 EKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGLCNANRVD 1296
             KG LIDR++YG LIE FV D K+G ACDLLKDL+DSGYRADL IY+S+IEGLCNA RVD
Sbjct: 355  VKGFLIDRAIYGVLIEGFVADRKVGAACDLLKDLMDSGYRADLGIYNSLIEGLCNAKRVD 414

Query: 1297 K 1299
            K
Sbjct: 415  K 415



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
 Frame = +1

Query: 721  VFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILS 900
            V +YN ++ +L K+G V  A+S++ + K+  L  ++ T+ I +    +   ++E     +
Sbjct: 501  VGIYNILMGSLHKSGKVKKALSLFNEMKDVDLQPDASTYSIAIMCFVEDEDIHEACASHN 560

Query: 901  RMRNL-CKPDVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVD-PDVMAYTTLVTGLCKG 1074
            ++  + C P + AY ++ R L   G +D  + +  +        P    Y+  +   CK 
Sbjct: 561  KIIEMSCVPSISAYCSLARGLCKVGEIDTVMLLVRDCLASVTSGPMEFKYSLTILHACKS 620

Query: 1075 NKVEKGYEFFKEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDL 1218
            N  EK  E   EM ++GC +D  +Y ++I      G I  A  +  +L
Sbjct: 621  NNAEKVIEVLNEMMQQGCPLDDVIYSAIISGMCKHGTIEEAMKIFSNL 668


>ref|XP_007008770.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
            cacao] gi|508725683|gb|EOY17580.1| Pentatricopeptide
            repeat (PPR-like) superfamily protein [Theobroma cacao]
          Length = 716

 Score =  568 bits (1465), Expect = e-159
 Identities = 282/423 (66%), Positives = 340/423 (80%), Gaps = 4/423 (0%)
 Frame = +1

Query: 43   MPPKSQPSTITNKLYFYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYKSSKTLNPNQCS 222
            MPPKS P+  T K YF+YGHRKPSQNRP V+GGLFSNR+I+   P          P Q S
Sbjct: 1    MPPKSLPAK-TPKPYFFYGHRKPSQNRPVVYGGLFSNRQILKTPPT---------PPQPS 50

Query: 223  --IDINKWDPNSPQKFPPTKTQSEKFFSIAQTLSPIARYICDSFRKHK-NWCPSIVKDLD 393
               D+ KWDP    + P   +    + +  + LSPIAR+I D+FRK++  W P++V +L+
Sbjct: 51   PPFDLRKWDPYYLSQNPSPPSTPNPYQN--RKLSPIARFIVDAFRKNQYTWGPTVVFELN 108

Query: 394  KLRRVPPNLVAEVLKAQTDPRISSRFFHWAGKQKGFRHNFASYNAFAYCLNRLNMFRAAD 573
            KLRRV  +LVAEVLK + DP ++S+FFHWAGKQKGF+HNFASYNA AYCLNR   FRAAD
Sbjct: 109  KLRRVTASLVAEVLKVENDPVLASKFFHWAGKQKGFKHNFASYNALAYCLNRNGRFRAAD 168

Query: 574  QVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLYNRILDAL 753
            Q+P+LM  QG QPTEKQFEILIRMH+D  RG RVYY+Y+KMKNFG+KPRVFLYNRI+DAL
Sbjct: 169  QLPELMDSQGKQPTEKQFEILIRMHADNNRGQRVYYVYQKMKNFGIKPRVFLYNRIMDAL 228

Query: 754  VKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMR-NLCKPDV 930
            VKTG++DLA+SVYEDF+ DGLVEES+TFMIL+KGLCK GR+ E+ E+L RMR  LCKPDV
Sbjct: 229  VKTGYLDLALSVYEDFRGDGLVEESITFMILIKGLCKAGRIEEMLEVLGRMREKLCKPDV 288

Query: 931  CAYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKE 1110
             AYTAM+RILVSE NLDGCL +WEEM+ DGV+PDVMAY TLVTGLCKG +V++GYE F+E
Sbjct: 289  FAYTAMVRILVSEKNLDGCLLVWEEMERDGVEPDVMAYVTLVTGLCKGGRVQRGYELFRE 348

Query: 1111 MREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGLCNANR 1290
            M++KG LIDR+ YG LIE FV DGK+G ACDLLKDL+DSGYRADL IY+S+IEGLC+A R
Sbjct: 349  MKDKGILIDRATYGVLIEGFVKDGKVGSACDLLKDLVDSGYRADLGIYNSLIEGLCDARR 408

Query: 1291 VDK 1299
            VD+
Sbjct: 409  VDR 411



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 61/274 (22%), Positives = 111/274 (40%), Gaps = 38/274 (13%)
 Frame = +1

Query: 589  MRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLYNRILDALVKTGH 768
            M   G +P    +  L+      GR  R Y ++ +MK+ G+      Y  +++  VK G 
Sbjct: 314  MERDGVEPDVMAYVTLVTGLCKGGRVQRGYELFREMKDKGILIDRATYGVLIEGFVKDGK 373

Query: 769  VDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEI------------------ 894
            V  A  + +D  + G   +   +  L++GLC   R++  +++                  
Sbjct: 374  VGSACDLLKDLVDSGYRADLGIYNSLIEGLCDARRVDRAYKLFQVTVQEGLEPEFATVNP 433

Query: 895  -------LSRMRNLCK-------------PDVCAYTAMIRILVSEGNLDGCLRIWEEMKI 1014
                   + RM + CK              D+  + + +  +  E      +++++E+K+
Sbjct: 434  MLVAFAEMRRMNDFCKLLEQMQKLGFSVIDDLSKFFSFV--VGKEERTVLAIQVFDELKV 491

Query: 1015 DGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKEMREKGCLIDRSMYGSLIEAFVVDGKIGL 1194
             G    V  Y  L+  L K  KV++    F+EM+      D S YG+ I  FV D  I  
Sbjct: 492  KGYT-GVPIYNILMEALRKTGKVKQALSLFQEMKGLNFEPDSSTYGTAIICFVEDENIKE 550

Query: 1195 ACDLLKDLIDSGYRADLSIYSSMIEGLCNANRVD 1296
            AC    ++I+      +  Y S+ +GLC    +D
Sbjct: 551  ACVCHNNIIEMSCVPSIDAYYSLAKGLCKIGEID 584


>gb|EXC10461.1| hypothetical protein L484_008628 [Morus notabilis]
          Length = 716

 Score =  563 bits (1450), Expect = e-158
 Identities = 275/424 (64%), Positives = 332/424 (78%), Gaps = 3/424 (0%)
 Frame = +1

Query: 37   PQMPPKSQPSTITNKLYFYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYKSSKTLNPNQ 216
            P  PP  +P     K YF+Y HRKPSQNRPTV GGLFSNR+ + P  N +   K  +   
Sbjct: 2    PAQPPPGKPQ----KFYFFYVHRKPSQNRPTVRGGLFSNRQSLKPRQNPHHHHKPPS--- 54

Query: 217  CSIDINKWDPNS-PQKFPPTKTQSEKFFSIAQTLSPIARYICDSFRK-HKNWCPSIVKDL 390
               D++KWDP+  P     T T     F     LSPIAR+I D+FRK H  W P +V +L
Sbjct: 55   ---DLSKWDPHLLPSPSSTTTTTPTLSF-----LSPIARFITDAFRKNHSKWGPPVVTEL 106

Query: 391  DKLRRVPPNLVAEVLKAQTDPRISSRFFHWAGKQKGFRHNFASYNAFAYCLNRLNMFRAA 570
             KLRRV PNLV EVLK QTDP ++S+FFHWAGKQKG+RHNFASYNAFAYCLNR + +R+A
Sbjct: 107  HKLRRVTPNLVTEVLKVQTDPSLASKFFHWAGKQKGYRHNFASYNAFAYCLNRGDRYRSA 166

Query: 571  DQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLYNRILDA 750
            DQVP LM  QG  P+EKQFEILIRMHSDA RGLRVYY YE MK FG+KPRVFL+NR++DA
Sbjct: 167  DQVPHLMEAQGKPPSEKQFEILIRMHSDANRGLRVYYAYENMKKFGIKPRVFLFNRVMDA 226

Query: 751  LVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMR-NLCKPD 927
            LV+TG++DLA+SVY DFKE GLVEESVTFMIL+KGLCK GR+ E+ E+L RMR  LCKPD
Sbjct: 227  LVRTGYLDLALSVYGDFKEAGLVEESVTFMILIKGLCKAGRVEEMLEVLGRMRGELCKPD 286

Query: 928  VCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFK 1107
            V AYTAM+R++V EGNLDGCLR+WEEM+ D V+PDV+AY T++ GLCKG +VEKGYE FK
Sbjct: 287  VFAYTAMVRVMVGEGNLDGCLRVWEEMRSDRVEPDVIAYGTVIAGLCKGGRVEKGYELFK 346

Query: 1108 EMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGLCNAN 1287
            EM+ KG L+DR++YG+L++AFV DGK+GLACD+ KDL++SGYRADL IY+ +I+GLCNA 
Sbjct: 347  EMKGKGALVDRAIYGALVKAFVEDGKVGLACDVFKDLVNSGYRADLDIYNYLIQGLCNAK 406

Query: 1288 RVDK 1299
            RVDK
Sbjct: 407  RVDK 410



 Score = 85.9 bits (211), Expect = 4e-14
 Identities = 54/217 (24%), Positives = 105/217 (48%), Gaps = 3/217 (1%)
 Frame = +1

Query: 625  FEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLYNRILDALVKTGHVDLAISVYEDFK 804
            F ILI+    AGR   +  +  +M+    KP VF Y  ++  +V  G++D  + V+E+ +
Sbjct: 255  FMILIKGLCKAGRVEEMLEVLGRMRGELCKPDVFAYTAMVRVMVGEGNLDGCLRVWEEMR 314

Query: 805  EDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMRNL-CKPDVCAYTAMIRILVSEGNLD 981
             D +  + + +  ++ GLCK GR+ + +E+   M+      D   Y A+++  V +G + 
Sbjct: 315  SDRVEPDVIAYGTVIAGLCKGGRVEKGYELFKEMKGKGALVDRAIYGALVKAFVEDGKVG 374

Query: 982  GCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKEMREKGCLIDRSMYGSLI 1161
                +++++   G   D+  Y  L+ GLC   +V+K Y+ F+   ++G   +      ++
Sbjct: 375  LACDVFKDLVNSGYRADLDIYNYLIQGLCNAKRVDKAYKLFRVTVQEGLGPNFVTINPIL 434

Query: 1162 EAFVVDGKIGLACDLLKDLIDSGYRA--DLSIYSSMI 1266
              +    KI   CDLL  +   G     DL+ + S +
Sbjct: 435  LCYAEMRKIDEFCDLLVQMQKLGISVVDDLTKFFSFV 471



 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 1/206 (0%)
 Frame = +1

Query: 682  IYEKMKNFGVKPRVFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLC 861
            +++ + N G +  + +YN ++  L     VD A  ++    ++GL    VT   ++    
Sbjct: 379  VFKDLVNSGYRADLDIYNYLIQGLCNAKRVDKAYKLFRVTVQEGLGPNFVTINPILLCYA 438

Query: 862  KVGRMNEVFEILSRMRNLCKPDVCAYTAMIRILVSEGN-LDGCLRIWEEMKIDGVDPDVM 1038
            ++ +++E  ++L +M+ L    V   T     +V +G+ L   L ++E++K+ G    V 
Sbjct: 439  EMRKIDEFCDLLVQMQKLGISVVDDLTKFFSFVVRKGDGLKMALEVFEDLKVRGY-YSVS 497

Query: 1039 AYTTLVTGLCKGNKVEKGYEFFKEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDL 1218
             Y  L+    K    +K      EM++     D S Y   IE FV +G +  AC     +
Sbjct: 498  IYNILMEAFYKTEMAKKALSLLNEMKDMNAQPDSSTYSVAIECFVEEGDLKEACACHNKI 557

Query: 1219 IDSGYRADLSIYSSMIEGLCNANRVD 1296
            I+      +S Y S+  GLCN   +D
Sbjct: 558  IEMSCVPSVSAYCSLARGLCNIGEID 583



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 61/253 (24%), Positives = 111/253 (43%), Gaps = 10/253 (3%)
 Frame = +1

Query: 490  QKGFRHNFASYNAFAYCLNRLNMFRAADQVPDL---MRMQGNQPTE---KQFEILIRMHS 651
            Q+G   NF + N    C   +   R  D+  DL   M+  G    +   K F  ++R   
Sbjct: 420  QEGLGPNFVTINPILLCYAEM---RKIDEFCDLLVQMQKLGISVVDDLTKFFSFVVRK-- 474

Query: 652  DAGRGLRVYY-IYEKMKNFGVKPRVFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEES 828
              G GL++   ++E +K  G    V +YN +++A  KT     A+S+  + K+     +S
Sbjct: 475  --GDGLKMALEVFEDLKVRGYYS-VSIYNILMEAFYKTEMAKKALSLLNEMKDMNAQPDS 531

Query: 829  VTFMILVKGLCKVGRMNEVFEILSRMRNL-CKPDVCAYTAMIRILVSEGNLDGCLRIWEE 1005
             T+ + ++   + G + E     +++  + C P V AY ++ R L + G +D  + +  +
Sbjct: 532  STYSVAIECFVEEGDLKEACACHNKIIEMSCVPSVSAYCSLARGLCNIGEIDAAMMLVRD 591

Query: 1006 MKIDGVDPDVMAYTTLVTGL--CKGNKVEKGYEFFKEMREKGCLIDRSMYGSLIEAFVVD 1179
              +  V    M +   +T L  CK  K EK      E+ ++GC  D  +  ++I      
Sbjct: 592  C-LASVSSGSMEFKYALTVLHACKSGKSEKVIGVLDELMQEGCPPDNVVLSAVISGMCRH 650

Query: 1180 GKIGLACDLLKDL 1218
            G I  A  +  +L
Sbjct: 651  GTIEEARKVFSNL 663


>ref|XP_003598903.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355487951|gb|AES69154.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 767

 Score =  562 bits (1449), Expect = e-157
 Identities = 283/428 (66%), Positives = 337/428 (78%), Gaps = 9/428 (2%)
 Frame = +1

Query: 43   MPPKSQPSTITNKLYFYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYKSSKTLNPNQCS 222
            MPP  Q  T  NK YF+YGHRKPSQNRPTV GGLFSNRK + P     KS+K  N    S
Sbjct: 1    MPP--QTPTPPNKFYFFYGHRKPSQNRPTVRGGLFSNRKTLTPPKP--KSTKPTN----S 52

Query: 223  IDINKWDP------NSPQKFPPTKTQSEKFFSIAQTLSPIARYICDSFRKHKN-WCPSIV 381
              I KWDP      NSP   P      E  FS +  LSPIAR+I D+FRK+ N W P +V
Sbjct: 53   FQIQKWDPHFLSQPNSPS--PSPSPSPEATFSASLRLSPIARFILDAFRKNNNNWGPPVV 110

Query: 382  KDLDKLRRVPPNLVAEVLKAQTDPRISSRFFHWAGKQKGFRHNFASYNAFAYCLNRLNMF 561
             +L+KLRRV P LVAEVLK QT+P ++ +FFHW  KQKG+ HNFASYNAF YCLNR N F
Sbjct: 111  TELNKLRRVTPTLVAEVLKVQTNPTLAFKFFHWVEKQKGYHHNFASYNAFTYCLNRANHF 170

Query: 562  RAADQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKN-FGVKPRVFLYNR 738
            RAADQ+P+LM  QG  P+EKQFEILIRMHSDAGRGLRVY++Y+KM+N FGVKPRVFLYNR
Sbjct: 171  RAADQLPELMDAQGKPPSEKQFEILIRMHSDAGRGLRVYHVYDKMRNKFGVKPRVFLYNR 230

Query: 739  ILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMRN-L 915
            I+DALVKTGH+DLA+SVY DF+EDGLVEESVTFMIL+KGLCK G+++E+ E+L RMR  L
Sbjct: 231  IMDALVKTGHLDLALSVYNDFREDGLVEESVTFMILIKGLCKGGKIDEMLEVLGRMREKL 290

Query: 916  CKPDVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGY 1095
            CKPDV AYTA++RI+V EGNLDGCLR+W+EMK D VDPDVMAY T++ GL KG +V +GY
Sbjct: 291  CKPDVFAYTALVRIMVKEGNLDGCLRVWKEMKRDRVDPDVMAYGTIIGGLAKGGRVSEGY 350

Query: 1096 EFFKEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGL 1275
            E FKEM+ KG LIDR++YGSL+E+FV   K+GLA DLLKDL+ SGYRADL +Y+++IEGL
Sbjct: 351  ELFKEMKSKGHLIDRAIYGSLVESFVAGNKVGLAFDLLKDLVSSGYRADLGMYNNLIEGL 410

Query: 1276 CNANRVDK 1299
            CN N+V+K
Sbjct: 411  CNLNKVEK 418



 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 3/215 (1%)
 Frame = +1

Query: 664  GLRVYYIYEKMKNF---GVKPRVFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESVT 834
            G +V   ++ +K+    G +  + +YN +++ L     V+ A  +++   ++GL  + ++
Sbjct: 378  GNKVGLAFDLLKDLVSSGYRADLGMYNNLIEGLCNLNKVEKAYKLFQVTIQEGLEPDFLS 437

Query: 835  FMILVKGLCKVGRMNEVFEILSRMRNLCKPDVCAYTAMIRILVSEGNLDGCLRIWEEMKI 1014
               L+    +  RM E F +L +M+ L  P +   +     LV +   +  L I+  +K 
Sbjct: 438  VKPLLLAYAEAKRMEEFFMLLEKMKKLGFPVIDDLSKFFSHLVEKKGPEMALEIFTHLKE 497

Query: 1015 DGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKEMREKGCLIDRSMYGSLIEAFVVDGKIGL 1194
                  V  Y   +  L    KVEK    F E++      D S Y   I   V  G+I  
Sbjct: 498  KSY-VSVEIYNIFMESLHLSGKVEKALSLFDEIKGSDLEPDSSTYNIAILCLVDHGQIKE 556

Query: 1195 ACDLLKDLIDSGYRADLSIYSSMIEGLCNANRVDK 1299
            AC+    +I+      ++ Y+ + +GLCN   +D+
Sbjct: 557  ACECHNKIIEMSSIPSVAAYNCLAKGLCNIGEIDE 591



 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 58/266 (21%), Positives = 111/266 (41%), Gaps = 35/266 (13%)
 Frame = +1

Query: 496  GFRHNFASYNAFAYCLNRLNMFRAADQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRV 675
            G+R +   YN     L  LN    A ++  +   +G +P     + L+  +++A R    
Sbjct: 395  GYRADLGMYNNLIEGLCNLNKVEKAYKLFQVTIQEGLEPDFLSVKPLLLAYAEAKRMEEF 454

Query: 676  YYIYEKMKNFG-----------------------------VKPR----VFLYNRILDALV 756
            + + EKMK  G                             +K +    V +YN  +++L 
Sbjct: 455  FMLLEKMKKLGFPVIDDLSKFFSHLVEKKGPEMALEIFTHLKEKSYVSVEIYNIFMESLH 514

Query: 757  KTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMRNLCK-PDVC 933
             +G V+ A+S++++ K   L  +S T+ I +  L   G++ E  E  +++  +   P V 
Sbjct: 515  LSGKVEKALSLFDEIKGSDLEPDSSTYNIAILCLVDHGQIKEACECHNKIIEMSSIPSVA 574

Query: 934  AYTAMIRILVSEGNLDGCLRIWEEMKIDGVD-PDVMAYTTLVTGLCKGNKVEKGYEFFKE 1110
            AY  + + L + G +D  + +  +   +    P    Y   +  +CK N  EK  +   E
Sbjct: 575  AYNCLAKGLCNIGEIDEAMLLVRDCLGNVTSGPMEFKYCLTIIRMCKSNVAEKLIDVLNE 634

Query: 1111 MREKGCLIDRSMYGSLIEAFVVDGKI 1188
            M ++GC +D  +  ++I      G I
Sbjct: 635  MMQEGCSLDNVVCSAIISGMCKYGTI 660


>ref|XP_004494981.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
            [Cicer arietinum]
          Length = 720

 Score =  558 bits (1437), Expect = e-156
 Identities = 277/420 (65%), Positives = 333/420 (79%), Gaps = 6/420 (1%)
 Frame = +1

Query: 58   QPSTITNKLYFYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYKSSKTLNPNQCSIDINK 237
            Q  T  NK YFYYGHRKPSQNRPTV GGLFSNR+ + P     KS  T  P     +I K
Sbjct: 4    QTPTTPNKFYFYYGHRKPSQNRPTVRGGLFSNRQTLTPP----KSKTTSRP----FEIQK 55

Query: 238  WDPN---SPQKFPPTKTQSEKFFSIAQTLSPIARYICDSFRKHK-NWCPSIVKDLDKLRR 405
            WDP+        PP    SE  FS +  LSPIAR+I D+FRK+   W PS++ +L+KLRR
Sbjct: 56   WDPHFLSQQNPSPPPSPSSEASFSPSLRLSPIARFIVDAFRKNSYKWGPSVITELNKLRR 115

Query: 406  VPPNLVAEVLKAQTDPRISSRFFHWAGKQKGFRHNFASYNAFAYCLNRLNMFRAADQVPD 585
            VPPNLVAEVLK QT+P ++ +FFHW   QKG+ HNFAS+NAFAYCLNR N F AADQ+P+
Sbjct: 116  VPPNLVAEVLKVQTNPTLAFKFFHWVENQKGYHHNFASFNAFAYCLNRANHFHAADQLPE 175

Query: 586  LMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKN-FGVKPRVFLYNRILDALVKT 762
            LM  QG  P+EKQFEILIRMHSDAGRGLR Y++Y+KM+N FGVKPRVFLYNRI+DALVKT
Sbjct: 176  LMDAQGKPPSEKQFEILIRMHSDAGRGLRAYHVYDKMRNKFGVKPRVFLYNRIMDALVKT 235

Query: 763  GHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMRN-LCKPDVCAY 939
             H+DLA+SVY DF+EDGLVEESVTFM+LVKGLCK GR+ E+ E+L RMR  L KPDV AY
Sbjct: 236  RHLDLALSVYNDFREDGLVEESVTFMVLVKGLCKAGRIGEMLEVLGRMREKLYKPDVFAY 295

Query: 940  TAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKEMRE 1119
            TA++RI+V+EGNLDGCLR+WEEMK DGV PDVMAY T++ GL K  +V++GYE FKEM+ 
Sbjct: 296  TALVRIMVAEGNLDGCLRVWEEMKRDGVVPDVMAYDTIIGGLAKEGRVKEGYELFKEMKS 355

Query: 1120 KGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGLCNANRVDK 1299
            KG LIDR++YGSLIE+FVV  K+GLA DLLKDL++SGYRADL IY+++I+GLCN N+V+K
Sbjct: 356  KGHLIDRAIYGSLIESFVVGNKVGLAFDLLKDLVNSGYRADLGIYNNLIKGLCNLNKVEK 415


>ref|XP_004515007.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
            [Cicer arietinum]
          Length = 720

 Score =  556 bits (1434), Expect = e-156
 Identities = 276/425 (64%), Positives = 332/425 (78%), Gaps = 6/425 (1%)
 Frame = +1

Query: 43   MPPKSQPSTITNKLYFYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYKSSKTLNPNQCS 222
            MPP  Q  T  NK YFYYGHR+PSQNRPTV GGLFSNR+ + P     K   T  P    
Sbjct: 1    MPP--QTPTTPNKFYFYYGHRQPSQNRPTVRGGLFSNRQTLTPP----KPKTTSRP---- 50

Query: 223  IDINKWDPN---SPQKFPPTKTQSEKFFSIAQTLSPIARYICDSFRKHK-NWCPSIVKDL 390
             +I KWDP+        PP        FS +  LSPI R+I D+FRK+   W PS++ +L
Sbjct: 51   FEIQKWDPHFLSQQNPSPPPSPSPAASFSASLRLSPIVRFIVDAFRKNGYKWGPSVITEL 110

Query: 391  DKLRRVPPNLVAEVLKAQTDPRISSRFFHWAGKQKGFRHNFASYNAFAYCLNRLNMFRAA 570
             K RRVPPNLVAEVLK QT+P I+ +FF W   QKG+ HNFAS+NAFAYCLNR N F AA
Sbjct: 111  SKFRRVPPNLVAEVLKVQTNPTIAFKFFRWVENQKGYHHNFASFNAFAYCLNRANHFHAA 170

Query: 571  DQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKN-FGVKPRVFLYNRILD 747
            DQ+P+LM  QG  P+EKQFEILIRMHSDAGRGLRVY++Y+KM+N FGVKPRVFLYNRI+D
Sbjct: 171  DQLPELMDAQGKPPSEKQFEILIRMHSDAGRGLRVYHVYDKMRNKFGVKPRVFLYNRIMD 230

Query: 748  ALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMRN-LCKP 924
            ALVKTGH+DLA+SVY DF+EDGLVEESVT+M+LVKGLCK GR+ E+ E+L RMR  LCKP
Sbjct: 231  ALVKTGHLDLALSVYNDFREDGLVEESVTYMVLVKGLCKAGRIGEMLEVLGRMREKLCKP 290

Query: 925  DVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFF 1104
            DVCAYTA++RI+V+EGNLDGCLR+WEEMK DGV PDVMAY T++ GL K  +V++GYE F
Sbjct: 291  DVCAYTALVRIMVAEGNLDGCLRVWEEMKRDGVVPDVMAYGTVIGGLAKEGRVKEGYELF 350

Query: 1105 KEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGLCNA 1284
            KEM+ KG LIDR++YGSLIE+FV   K+GLA DLL+DL++SGYRADL IY+++IEGLCN 
Sbjct: 351  KEMKSKGHLIDRAIYGSLIESFVAGNKVGLAFDLLRDLVNSGYRADLGIYNNLIEGLCNL 410

Query: 1285 NRVDK 1299
            N+V+K
Sbjct: 411  NKVEK 415


>ref|XP_006605814.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
            isoform X2 [Glycine max] gi|571565751|ref|XP_003555182.2|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g20740-like isoform X1 [Glycine max]
          Length = 764

 Score =  556 bits (1433), Expect = e-156
 Identities = 272/424 (64%), Positives = 333/424 (78%), Gaps = 6/424 (1%)
 Frame = +1

Query: 46   PPKSQPSTITNKLYFYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYKSSKTLNPNQCSI 225
            PP + P   TNK YF+YGHR PSQNRPTV GGLFSNR+ +NPNP+  K      P     
Sbjct: 47   PPFTTPKP-TNKFYFFYGHRNPSQNRPTVRGGLFSNRQTLNPNPSQPK------PTTKPF 99

Query: 226  DINKWDPN---SPQKFPPTKTQSEKFFSIAQTLSPIARYICDSFRKHKN-WCPSIVKDLD 393
            +I  WDP+   +P   P   T S    S +  LSPIAR+I D+FR++ N WCP++  +L 
Sbjct: 100  NIKNWDPHFLSNPNSNPSPSTLS----SASLRLSPIARFIVDAFRRNDNKWCPNVAAELS 155

Query: 394  KLRRVPPNLVAEVLKAQTDPRISSRFFHWAGKQKGFRHNFASYNAFAYCLNRLNMFRAAD 573
            KLRR+ PNLVAEVLK QT+  ++S+FFHWAG Q+G+ HNFASYNA AYCLNR + FRAAD
Sbjct: 156  KLRRITPNLVAEVLKVQTNHTLASKFFHWAGSQRGYHHNFASYNALAYCLNRHHQFRAAD 215

Query: 574  QVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKN-FGVKPRVFLYNRILDA 750
            Q+P+LM  QG  P+EKQFEILIRMHSDA RGLRVY++YEKM+N FGVKPRVFLYNR++DA
Sbjct: 216  QLPELMESQGKPPSEKQFEILIRMHSDANRGLRVYHVYEKMRNKFGVKPRVFLYNRVMDA 275

Query: 751  LVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMRN-LCKPD 927
            LV+TGH+DLA+SVY+D KEDGLVEESVTFM+LVKGLCK GR++E+ E+L RMR  LCKPD
Sbjct: 276  LVRTGHLDLALSVYDDLKEDGLVEESVTFMVLVKGLCKCGRIDEMLEVLGRMRERLCKPD 335

Query: 928  VCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFK 1107
            V AYTA+++ILV  GNLD CLR+WEEMK D V+PDV AY T++ GL KG +V++GYE F+
Sbjct: 336  VFAYTALVKILVPAGNLDACLRVWEEMKRDRVEPDVKAYATMIVGLAKGGRVQEGYELFR 395

Query: 1108 EMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGLCNAN 1287
            EM+ KGCL+DR +YG+L+EAFV +GK+ LA DLLKDL+ SGYRADL IY  +IEGLCN N
Sbjct: 396  EMKGKGCLVDRVIYGALVEAFVAEGKVELAFDLLKDLVSSGYRADLGIYICLIEGLCNLN 455

Query: 1288 RVDK 1299
            RV K
Sbjct: 456  RVQK 459



 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 64/296 (21%), Positives = 115/296 (38%), Gaps = 35/296 (11%)
 Frame = +1

Query: 517  SYNAFAYCLNRLNMFRAADQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKM 696
            +Y A    L       A  +V + M+    +P  K +  +I   +  GR    Y ++ +M
Sbjct: 338  AYTALVKILVPAGNLDACLRVWEEMKRDRVEPDVKAYATMIVGLAKGGRVQEGYELFREM 397

Query: 697  KNFGVKPRVFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRM 876
            K  G      +Y  +++A V  G V+LA  + +D    G   +   ++ L++GLC + R+
Sbjct: 398  KGKGCLVDRVIYGALVEAFVAEGKVELAFDLLKDLVSSGYRADLGIYICLIEGLCNLNRV 457

Query: 877  NEVFEIL-------------------------SRMRNLCK----------PDVCAYTAMI 951
             + +++                          +RM   CK          P +   +   
Sbjct: 458  QKAYKLFQLTVREGLEPDFLTVKPLLVAYAEANRMEEFCKLLEQMQKLGFPVIADLSKFF 517

Query: 952  RILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKEMREKGCL 1131
             +LV +      L  + ++K  G    V  Y   +  L K  +V+K    F EM+     
Sbjct: 518  SVLVEKKGPIMALETFGQLKEKG-HVSVEIYNIFMDSLHKIGEVKKALSLFDEMKGLSLK 576

Query: 1132 IDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGLCNANRVDK 1299
             D   Y + I   V  G+I  AC     +I+      ++ YSS+ +GLC    +D+
Sbjct: 577  PDSFTYCTAILCLVDLGEIKEACACHNRIIEMSCIPSVAAYSSLTKGLCQIGEIDE 632


>ref|XP_004511291.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
            isoform X1 [Cicer arietinum]
            gi|502158821|ref|XP_004511292.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At4g20740-like isoform X2 [Cicer arietinum]
            gi|502158825|ref|XP_004511293.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At4g20740-like isoform X3 [Cicer arietinum]
          Length = 720

 Score =  549 bits (1415), Expect = e-154
 Identities = 275/425 (64%), Positives = 332/425 (78%), Gaps = 6/425 (1%)
 Frame = +1

Query: 43   MPPKSQPSTITNKLYFYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYKSSKTLNPNQCS 222
            MPP  Q  T  NK YFYYGHRKPSQNRPTV GGLFSNR+ + P     K + T  P    
Sbjct: 1    MPP--QTPTTPNKFYFYYGHRKPSQNRPTVRGGLFSNRQTLTPP----KPTTTSRP---- 50

Query: 223  IDINKWDPN---SPQKFPPTKTQSEKFFSIAQTLSPIARYICDSFRKHK-NWCPSIVKDL 390
             +I KWDP+        PP     E  FS +  LSPIAR+I D+FRK+   W PS++ +L
Sbjct: 51   FEIQKWDPHFLSQQNPSPPPPPSPEASFSASLRLSPIARFIVDAFRKNGYKWGPSVIAEL 110

Query: 391  DKLRRVPPNLVAEVLKAQTDPRISSRFFHWAGKQKGFRHNFASYNAFAYCLNRLNMFRAA 570
            +KLRRVPPNLVAEVLK QT+P ++ +FFHW   QKG+ HNFAS+NAFAYCLNR N F AA
Sbjct: 111  NKLRRVPPNLVAEVLKVQTNPTLTFKFFHWVENQKGYHHNFASFNAFAYCLNRANHFHAA 170

Query: 571  DQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKN-FGVKPRVFLYNRILD 747
            DQ+P+LM   G  P+EKQFEILIRMH DAGRGLRVY+IY+KM+N FGVKPRVFLYN I+D
Sbjct: 171  DQLPELMDAHGKPPSEKQFEILIRMHCDAGRGLRVYHIYDKMRNKFGVKPRVFLYNTIMD 230

Query: 748  ALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMRN-LCKP 924
            ALV+T H+DLA+SVY DF+EDGLVEESVTFM+LVKGLCK GR+ E+ E+L RMR  LCKP
Sbjct: 231  ALVRTRHLDLALSVYNDFREDGLVEESVTFMVLVKGLCKAGRIGEMLEVLGRMREKLCKP 290

Query: 925  DVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFF 1104
            DV AYTA++RI+V+EGNLDGCLR+WEEMK DGV  DVMAY T++ GL K  +V++GYE F
Sbjct: 291  DVFAYTALVRIMVAEGNLDGCLRVWEEMKRDGVVLDVMAYGTIIGGLAKEGRVKEGYELF 350

Query: 1105 KEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGLCNA 1284
            KEM+ KG LIDR++YGSLIE+FV   K+GLA DLLKDL++SGYRADL IY+++I+GLCN 
Sbjct: 351  KEMKSKGHLIDRAIYGSLIESFVAGNKVGLAFDLLKDLVNSGYRADLGIYNNLIKGLCNL 410

Query: 1285 NRVDK 1299
            N+V+K
Sbjct: 411  NKVEK 415



 Score = 64.7 bits (156), Expect = 8e-08
 Identities = 45/206 (21%), Positives = 89/206 (43%)
 Frame = +1

Query: 682  IYEKMKNFGVKPRVFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLC 861
            + + + N G +  + +YN ++  L     V+ A  +++   ++GL  + ++   L+    
Sbjct: 384  LLKDLVNSGYRADLGIYNNLIKGLCNLNKVEKAYKLFQVTIQEGLEPDFLSVKPLLLAYA 443

Query: 862  KVGRMNEVFEILSRMRNLCKPDVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMA 1041
            +  RM E +++L +M  L  P +   +     LV +      L I+  +K  G    V  
Sbjct: 444  EAKRMEEFYKLLKKMEKLGFPVIDDLSKFFSHLVEKKGPVMSLEIFTHLKEKGY-VSVEI 502

Query: 1042 YTTLVTGLCKGNKVEKGYEFFKEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLI 1221
            Y  L+  L    +V+K    F E++  G   D S Y   I   +  G+I  AC     +I
Sbjct: 503  YNVLMDSLRLSGEVKKALSLFDEIKGSGMKPDSSTYNIAILCLIARGEIQEACVCHNKII 562

Query: 1222 DSGYRADLSIYSSMIEGLCNANRVDK 1299
            +      + +Y  + +GLC    +++
Sbjct: 563  EMSCIPSVVVYHRLAKGLCEIGEIEE 588


>ref|XP_006413862.1| hypothetical protein EUTSA_v10024515mg [Eutrema salsugineum]
            gi|557115032|gb|ESQ55315.1| hypothetical protein
            EUTSA_v10024515mg [Eutrema salsugineum]
          Length = 735

 Score =  538 bits (1387), Expect = e-150
 Identities = 269/425 (63%), Positives = 327/425 (76%), Gaps = 4/425 (0%)
 Frame = +1

Query: 37   PQMPPKSQPSTITNKLYFYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYKSSKTLNPNQ 216
            P +P K      T K  F+YGHRKPSQNRP VHGGLFSNR+ ++ +P   +S      ++
Sbjct: 7    PNLPEK------TLKPNFFYGHRKPSQNRPVVHGGLFSNRQYLSRDPP--QSPSNAVADR 58

Query: 217  CSIDINKWDPNS--PQKFPPTKTQSEKFFSIAQTLSPIARYICDSFRKHKN-WCPSIVKD 387
               D+ KWDP S  P +   + + S    + ++ LSPIAR++ D+FRK++N W PS+V +
Sbjct: 59   IPFDLRKWDPESRLPSERASSSSPSTSISAASERLSPIARFVLDAFRKNRNRWGPSVVSE 118

Query: 388  LDKLRRVPPNLVAEVLKAQTDPRISSRFFHWAGKQKGFRHNFASYNAFAYCLNRLNMFRA 567
            L+KLRRV P++VAEVLK   D  +S++FFHWAGKQKG++H+FA+YNAFAYCLNR   FRA
Sbjct: 119  LNKLRRVTPSIVAEVLKVGNDAAVSAKFFHWAGKQKGYKHDFAAYNAFAYCLNRTGHFRA 178

Query: 568  ADQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLYNRILD 747
            ADQ+P+LM  QG  P+EKQFEILIRMHSD  RGLRVYY+YEKMK FG KPRVFLYNRI+D
Sbjct: 179  ADQLPELMDSQGRPPSEKQFEILIRMHSDNKRGLRVYYVYEKMKKFGFKPRVFLYNRIMD 238

Query: 748  ALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMR-NLCKP 924
            AL+KTG+ DLA++VYEDFKEDGLVEES TFMILVKGLCK GRM E+ EIL RMR NLC+P
Sbjct: 239  ALMKTGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKSGRMEEMLEILQRMRENLCRP 298

Query: 925  DVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFF 1104
            DV AYTAMI+ LVSEGN+D  LR+W+EMK D V PDVMAY TLV GLCK  +VEKGYE F
Sbjct: 299  DVFAYTAMIKTLVSEGNMDASLRVWDEMKRDEVKPDVMAYGTLVMGLCKDGRVEKGYELF 358

Query: 1105 KEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGLCNA 1284
             EM+EK  LIDR +Y  LIE FV DGK+  ACDL KDL+DSGY ADL IY+++I+GLC  
Sbjct: 359  MEMKEKQILIDRDIYRVLIEGFVADGKVRSACDLWKDLVDSGYIADLGIYNAIIKGLCTV 418

Query: 1285 NRVDK 1299
             +VDK
Sbjct: 419  KQVDK 423



 Score = 68.6 bits (166), Expect = 6e-09
 Identities = 67/301 (22%), Positives = 113/301 (37%), Gaps = 36/301 (11%)
 Frame = +1

Query: 502  RHNFASYNAFAYCLNRLNMFRAADQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYY 681
            R +  +Y A    L       A+ +V D M+    +P    +  L+      GR  + Y 
Sbjct: 297  RPDVFAYTAMIKTLVSEGNMDASLRVWDEMKRDEVKPDVMAYGTLVMGLCKDGRVEKGYE 356

Query: 682  IYEKMKNFGVKPRVFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLC 861
            ++ +MK   +     +Y  +++  V  G V  A  +++D  + G + +   +  ++KGLC
Sbjct: 357  LFMEMKEKQILIDRDIYRVLIEGFVADGKVRSACDLWKDLVDSGYIADLGIYNAIIKGLC 416

Query: 862  KVG-----------------------------------RMNEVFEILSRMRNLCKPDVCA 936
             V                                    R+++ + +L R+     P    
Sbjct: 417  TVKQVDKAYKLFQIATEEELEPDFETLSPIMVAYVVMKRLSDFWNLLERIAESGYPVADY 476

Query: 937  YTAMIRILVS-EGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKEM 1113
             T   R+L   E      L +++ +K  G    V  Y  L+  L K   + K    F EM
Sbjct: 477  LTQFFRLLCDDEEKRTLALDVFDVLKTQG-HGSVSVYNILMEALYKMGNIHKSLSLFFEM 535

Query: 1114 REKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGLCNANRV 1293
            RE G   D S Y   I  FV  G +  AC   + +I+       S Y S+ +GLC    +
Sbjct: 536  REYGFEPDSSSYSIAISCFVEKGDVQEACSCHEKIIEMSCVPSTSAYLSLTKGLCQIGEI 595

Query: 1294 D 1296
            D
Sbjct: 596  D 596



 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 39/190 (20%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
 Frame = +1

Query: 583  DLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLYNRILDALVKT 762
            D+++ QG+      + IL+      G   +   ++ +M+ +G +P    Y+  +   V+ 
Sbjct: 499  DVLKTQGHGSVSV-YNILMEALYKMGNIHKSLSLFFEMREYGFEPDSSSYSIAISCFVEK 557

Query: 763  GHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMRNLCKPDVCAYT 942
            G V  A S +E   E   V  +  ++ L KGLC++G ++ V +++       +     + 
Sbjct: 558  GDVQEACSCHEKIIEMSCVPSTSAYLSLTKGLCQIGEIDAVMKLVRECLGNVESGPMEFK 617

Query: 943  AMIRI--LVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKEMR 1116
              +R+  +    N +  + + +EM  +GV    + Y  +++G+CK   ++   E F E++
Sbjct: 618  YALRVCHVCKVNNAEKVMEVLDEMNQEGVCISEVIYCAIISGMCKHGTIKAAREVFAELK 677

Query: 1117 EKGCLIDRSM 1146
            ++  + +  M
Sbjct: 678  KRKVMTEAEM 687


>ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
            [Vitis vinifera]
          Length = 1294

 Score =  538 bits (1387), Expect = e-150
 Identities = 270/433 (62%), Positives = 321/433 (74%), Gaps = 3/433 (0%)
 Frame = +1

Query: 10   KWKKRATTNPQMPPKSQPSTITNKLYFYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYK 189
            K+ + +  N +MPP+ QP    +K YF+YGHRKPSQNRPTVHGGLFSNR  +NP P    
Sbjct: 529  KFAEGSLKNSKMPPQPQPPK-PHKFYFFYGHRKPSQNRPTVHGGLFSNRTTLNPKP---- 583

Query: 190  SSKTLNPNQCSIDINKWDPNSPQKF--PPTKTQSEKFFSIAQTLSPIARYICDSFRKHKN 363
               TL       ++  WDP+SP+    PP+KT  E+FF IA+ LSPIARYICDSFRKH+N
Sbjct: 584  --PTLQNPTTHFNLQNWDPDSPKALAIPPSKTPCERFFDIAKNLSPIARYICDSFRKHRN 641

Query: 364  WCPSIVKDLDKLRRVPPNLVAEVLKAQTDPRISSRFFHWAGKQKGFRHNFASYNAFAYCL 543
            W P +V DL+KLRRV P LVAEVLK QTDP I S+FFHWAGKQKG++HNFASYNAFAYCL
Sbjct: 642  WGPPVVADLNKLRRVTPVLVAEVLKVQTDPVICSKFFHWAGKQKGYKHNFASYNAFAYCL 701

Query: 544  NRLNMFRAADQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRV 723
            NR N FRAADQVP+LM MQG  P+EKQFEILIRMH DA RGLRVYY+YEKMK FG+KPRV
Sbjct: 702  NRSNQFRAADQVPELMNMQGKPPSEKQFEILIRMHIDANRGLRVYYVYEKMKKFGIKPRV 761

Query: 724  FLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSR 903
            FLYNRI+D LVKTGH+DLA+SVYEDFKEDGLVEESVT+MILVKGLCK GR++EV E+   
Sbjct: 762  FLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKAGRIDEVLEVWEE 821

Query: 904  MR-NLCKPDVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNK 1080
            MR +  +PDV AYT +                                   V  LC GN+
Sbjct: 822  MRKDKVEPDVMAYTTL-----------------------------------VAALCNGNR 846

Query: 1081 VEKGYEFFKEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSS 1260
            V +G+E FKEM++K  LIDR++YGSLIE FVV+ ++G ACDLLKDL+DSGYRADL+IY+S
Sbjct: 847  VGEGFELFKEMKQKKYLIDRAIYGSLIEGFVVNERVGSACDLLKDLMDSGYRADLAIYNS 906

Query: 1261 MIEGLCNANRVDK 1299
            +IEG+CN  +VDK
Sbjct: 907  LIEGMCNVKQVDK 919



 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 41/171 (23%), Positives = 81/171 (47%), Gaps = 2/171 (1%)
 Frame = +1

Query: 682  IYEKMKNFGVKPRVFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLC 861
            ++E +K  G    + +YN +++A+ +TG V  A+S+++D K+     +S T+   +    
Sbjct: 993  VFEHLKAKGYCS-ISIYNILMEAIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICFV 1051

Query: 862  KVGRMNEVFEILSRMRNLCK-PDVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVD-PDV 1035
            +VG + E     +++  +C+ P V AY ++++ L     +D  + +  +   +    P  
Sbjct: 1052 EVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGPME 1111

Query: 1036 MAYTTLVTGLCKGNKVEKGYEFFKEMREKGCLIDRSMYGSLIEAFVVDGKI 1188
              YT  +   CK    EK  +   EM ++GC  D   Y +LI      G +
Sbjct: 1112 FKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALISGMCKHGTL 1162



 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 2/176 (1%)
 Frame = +1

Query: 625  FEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLYNRILDALVKTGHVDLAISVYEDFK 804
            + IL+      G   +   +++ +K+   KP    Y+  +   V+ G V  A + Y    
Sbjct: 1008 YNILMEAIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICFVEVGDVQEACACYNKII 1067

Query: 805  EDGLVEESVTFMILVKGLCKVGRMNEVFEILSR-MRNLCK-PDVCAYTAMIRILVSEGNL 978
            E   +     +  LVKGLCK   ++    ++   + N+   P    YT  I      GN 
Sbjct: 1068 EMCQLPSVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGPMEFKYTLTILHACKSGNA 1127

Query: 979  DGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKEMREKGCLIDRSM 1146
            +  + +  EM  +G  PD + Y+ L++G+CK   +E+  + F  MRE+  L + ++
Sbjct: 1128 EKVIDVLNEMMQEGCTPDEVTYSALISGMCKHGTLEEARKVFSNMRERKLLTEANV 1183


>ref|XP_007149018.1| hypothetical protein PHAVU_005G033500g [Phaseolus vulgaris]
            gi|561022282|gb|ESW21012.1| hypothetical protein
            PHAVU_005G033500g [Phaseolus vulgaris]
          Length = 715

 Score =  536 bits (1382), Expect = e-150
 Identities = 267/429 (62%), Positives = 326/429 (75%), Gaps = 8/429 (1%)
 Frame = +1

Query: 37   PQMPPKSQPSTITNKLYFYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYKSSKTLNPNQ 216
            PQ+P  ++P    N  YF+YGHRKPSQNRPTV GGLFSNR+ + P+      +K  N   
Sbjct: 3    PQVPQPNKP----NNFYFFYGHRKPSQNRPTVRGGLFSNRQTLTPSSKPNLKTKPFN--- 55

Query: 217  CSIDINKWDPN-----SPQKFPPTKTQSEKFFSIAQTLSPIARYICDSFRKHKN-WCPSI 378
                I  WDP+     SP+  PP+ T           LSPIAR+I D+FRK+ N WCP++
Sbjct: 56   ----IKDWDPHFLSNPSPRSSPPSPTLR---------LSPIARFIVDAFRKNDNKWCPNV 102

Query: 379  VKDLDKLRRVPPNLVAEVLKAQTDPRISSRFFHWAGKQKGFRHNFASYNAFAYCLNRLNM 558
            V +L KLRRV PNLVAEVLK QT+  ++S+FFHWA  QKG+ HNFASYNA AYCLNR + 
Sbjct: 103  VAELKKLRRVTPNLVAEVLKVQTNHALASKFFHWANNQKGYHHNFASYNALAYCLNRSHQ 162

Query: 559  FRAADQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKN-FGVKPRVFLYN 735
            FRAADQ+P+LM   G  P+EKQFEILIRMHSDA RGLRVYY+Y+KM+N FGVKPRVFLYN
Sbjct: 163  FRAADQLPELMDSHGRPPSEKQFEILIRMHSDANRGLRVYYVYDKMRNKFGVKPRVFLYN 222

Query: 736  RILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMR-N 912
            R++DAL KTGH+DL +SVY+DFKEDGLVEESVTFM+LVKGLCK GR++E+ E+L RMR +
Sbjct: 223  RVMDALFKTGHLDLGLSVYDDFKEDGLVEESVTFMLLVKGLCKGGRIDEMLEVLGRMRES 282

Query: 913  LCKPDVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKG 1092
            LCKPDV AYTA++RILV  G+LD CLR+WEEMK DGV  D  AY T++ GL KG +V++G
Sbjct: 283  LCKPDVFAYTALVRILVRAGDLDACLRVWEEMKRDGVVVDPKAYATMIVGLAKGGRVQEG 342

Query: 1093 YEFFKEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEG 1272
            YE FKEM+ KG L+DR +YG L+EAFV  GK+GLA DLLKDL+ SGY ADL IY+ +IEG
Sbjct: 343  YELFKEMKSKGFLVDRVIYGKLVEAFVAGGKVGLAFDLLKDLVSSGYTADLEIYNCLIEG 402

Query: 1273 LCNANRVDK 1299
            LCN  ++ K
Sbjct: 403  LCNLKKLQK 411



 Score = 72.0 bits (175), Expect = 5e-10
 Identities = 59/271 (21%), Positives = 115/271 (42%), Gaps = 3/271 (1%)
 Frame = +1

Query: 496  GFRHNFASYNAFAYCLNRLNMFRAADQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRV 675
            G+  +   YN     L  L   + A ++  +   +G +P     + L+  +++A R    
Sbjct: 388  GYTADLEIYNCLIEGLCNLKKLQKAYKLFQVTVGEGLEPDFLTVKPLLVAYAEANRMEEF 447

Query: 676  YYIYEKMKNFGVKPRVFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKG 855
              + EKM+  G  P +   ++    LV+     +A+  +   KE G V   + + IL   
Sbjct: 448  CKLLEKMQKLGF-PVLADLSKFFSVLVEKNGPTMAVEAFAHLKEKGHVSVEI-YNILTDS 505

Query: 856  LCKVGRMNEVFEILSRMRNLCKPDVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDV 1035
            L K+G   +   +   M+++ +PD   Y+ +I+ LV  G +        ++      P V
Sbjct: 506  LYKIGEEKKALSLFDEMKSMMEPDSITYSIVIQCLVDLGEIQEACVCHNKIIEMSCIPSV 565

Query: 1036 MAYTTLVTGLCKGNKVEKGYEFFKEMREKGCLIDRSM---YGSLIEAFVVDGKIGLACDL 1206
             AY +L  GLCK  ++++     ++    G + D  M   Y   I              +
Sbjct: 566  AAYRSLAKGLCKIGEIDEAMMLVRDCL--GSVSDGPMEFKYSLTIIHACKSNDAEKVIGV 623

Query: 1207 LKDLIDSGYRADLSIYSSMIEGLCNANRVDK 1299
            L ++++ G   D  IYS++I G+C    +++
Sbjct: 624  LNEMMEQGCSLDNVIYSAIISGMCKHGTIEE 654



 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 4/186 (2%)
 Frame = +1

Query: 721  VFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILS 900
            V +YN + D+L K G    A+S++++ K   +  +S+T+ I+++ L  +G + E     +
Sbjct: 496  VEIYNILTDSLYKIGEEKKALSLFDEMKSM-MEPDSITYSIVIQCLVDLGEIQEACVCHN 554

Query: 901  RMRNL-CKPDVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVD-PDVMAYTTLVTGLCKG 1074
            ++  + C P V AY ++ + L   G +D  + +  +      D P    Y+  +   CK 
Sbjct: 555  KIIEMSCIPSVAAYRSLAKGLCKIGEIDEAMMLVRDCLGSVSDGPMEFKYSLTIIHACKS 614

Query: 1075 NKVEKGYEFFKEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGY--RADLS 1248
            N  EK      EM E+GC +D  +Y ++I      G I  A  +  +L +  Y   +D  
Sbjct: 615  NDAEKVIGVLNEMMEQGCSLDNVIYSAIISGMCKHGTIEEARKVFSNLRERNYLTESDTI 674

Query: 1249 IYSSMI 1266
            +Y  ++
Sbjct: 675  VYEELL 680


>ref|XP_006482966.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
            [Citrus sinensis]
          Length = 721

 Score =  535 bits (1377), Expect = e-149
 Identities = 269/428 (62%), Positives = 330/428 (77%), Gaps = 7/428 (1%)
 Frame = +1

Query: 37   PQMPPKSQPSTITNKLYFYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYKSSKTLNPNQ 216
            PQ PPK          YF+YGHRKPSQNRPTV+GG FSNR+ +  NPN      T  P+Q
Sbjct: 6    PQRPPKP---------YFFYGHRKPSQNRPTVYGGFFSNRQSLR-NPN-----STSEPHQ 50

Query: 217  CS-IDINKWDPNSPQKFPPTKTQSE----KFFSIAQTLSPIARYICDSFRKHK-NWCPSI 378
                ++ KWDP+     P  KTQS     K F + + LSPIAR+I D+FRK++ +W P +
Sbjct: 51   SQPFNVQKWDPHY---LPNQKTQSPPSDPKTFQLQRHLSPIARFITDAFRKNQFHWGPRV 107

Query: 379  VKDLDKLRRVPPNLVAEVLKAQTDPRISSRFFHWAGKQKGFRHNFASYNAFAYCLNRLNM 558
            V +L KLRRV P+LVAEVLK + +P ++S+FFHWAGKQKG++HNFASYNA AYCL+R N+
Sbjct: 108  VTELSKLRRVTPDLVAEVLKVENNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNL 167

Query: 559  FRAADQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLYNR 738
            FRAADQVP+LM  QG  PTEKQFEILIRMH+D  RGLRV+++Y+KMK FG+ PRVFLYN+
Sbjct: 168  FRAADQVPELMDSQGKPPTEKQFEILIRMHADCNRGLRVFHVYQKMKKFGILPRVFLYNK 227

Query: 739  ILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRM-RNL 915
            I+DALVKT  +DLA+SVYE+FK  GLVEESVT+MIL+KGLCK GR+ E+ EIL +M RNL
Sbjct: 228  IMDALVKTNCLDLALSVYEEFKGHGLVEESVTYMILIKGLCKAGRIAEMLEILEKMRRNL 287

Query: 916  CKPDVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGY 1095
            CKPDV AYTAMIR+L +E NLD CLR+WEEMK D V+ DVMAY TL+ GLCKG +V +GY
Sbjct: 288  CKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGY 347

Query: 1096 EFFKEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGL 1275
            E F+EM+E G LIDR++YG LIE  V +GK+G ACDLLKDL+DSGYRADL IY+S+I GL
Sbjct: 348  ELFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGL 407

Query: 1276 CNANRVDK 1299
            C   + DK
Sbjct: 408  CRVKQFDK 415



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 1/198 (0%)
 Frame = +1

Query: 706  GVKPRVFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEV 885
            G +  + +YN I+  L +    D A  ++E   +D L  +  T   L+    ++GRM+  
Sbjct: 392  GYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNF 451

Query: 886  FEILSRMRNLCKPDVCAYTAMIRILVS-EGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTG 1062
            F++L++   L              LV  E  +   L ++EE+K  G    V  Y  L+  
Sbjct: 452  FKLLAQTEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPIYNILMGA 510

Query: 1063 LCKGNKVEKGYEFFKEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRAD 1242
            L +  +V+K    F EMR     ++   +   I+  V  G+I  AC+    +I+      
Sbjct: 511  LLEIGEVKKALYLFGEMRGLNLEVNSLSFSIAIQCHVESGEILEACECHNKIIEMSQVPS 570

Query: 1243 LSIYSSMIEGLCNANRVD 1296
            ++ Y+ + +GLC    +D
Sbjct: 571  VAAYNCLTKGLCKIGEID 588


>ref|XP_006438906.1| hypothetical protein CICLE_v10030824mg [Citrus clementina]
            gi|557541102|gb|ESR52146.1| hypothetical protein
            CICLE_v10030824mg [Citrus clementina]
          Length = 721

 Score =  531 bits (1369), Expect = e-148
 Identities = 267/428 (62%), Positives = 329/428 (76%), Gaps = 7/428 (1%)
 Frame = +1

Query: 37   PQMPPKSQPSTITNKLYFYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYKSSKTLNPNQ 216
            PQ PPK          YF+YGHRKPSQNRPTV+GG FSNR+ +  NPN      T  P+Q
Sbjct: 6    PQRPPKP---------YFFYGHRKPSQNRPTVYGGFFSNRQSLR-NPN-----STSEPHQ 50

Query: 217  CS-IDINKWDPNSPQKFPPTKTQSE----KFFSIAQTLSPIARYICDSFRKHK-NWCPSI 378
                ++ KWDP+     P  KTQS     K F + + LSPIAR+I D+F K++ +W P +
Sbjct: 51   SQPFNVQKWDPHY---LPSQKTQSPPSDPKTFQLQRHLSPIARFITDAFHKNQFHWGPRV 107

Query: 379  VKDLDKLRRVPPNLVAEVLKAQTDPRISSRFFHWAGKQKGFRHNFASYNAFAYCLNRLNM 558
            V +L KLRRV P+LVAEVLK + +P ++S+FFHWAGKQKG++HNFASYNA AYCL+R N+
Sbjct: 108  VTELSKLRRVTPDLVAEVLKVENNPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNL 167

Query: 559  FRAADQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLYNR 738
            FRAADQVP+LM  QG  PTEKQFEILIRMH+D  RGLRV+++Y+KMK FG+ PRVFLYN+
Sbjct: 168  FRAADQVPELMDSQGKPPTEKQFEILIRMHADCNRGLRVFHVYQKMKKFGILPRVFLYNK 227

Query: 739  ILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRM-RNL 915
            I+DALVKT  +DLA+SVYE+FK  GLVEESVT+MIL+KGLCK GR+ E+ EIL +M RNL
Sbjct: 228  IMDALVKTNCLDLALSVYEEFKGHGLVEESVTYMILIKGLCKAGRIAEMLEILEKMRRNL 287

Query: 916  CKPDVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGY 1095
            CKPDV AYTAMIR+L +E NLD CLR+WEEMK D V+ DVMAY TL+ GLCKG +V +GY
Sbjct: 288  CKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVVRGY 347

Query: 1096 EFFKEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGL 1275
            + F+EM+E G LIDR++YG LIE  V +GK+G ACDLLKDL+DSGYRADL IY+S+I GL
Sbjct: 348  KLFREMKENGILIDRAIYGVLIEGLVGEGKVGKACDLLKDLVDSGYRADLGIYNSIIGGL 407

Query: 1276 CNANRVDK 1299
            C   + DK
Sbjct: 408  CRVKQFDK 415



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 1/198 (0%)
 Frame = +1

Query: 706  GVKPRVFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEV 885
            G +  + +YN I+  L +    D A  ++E   +D L  +  T   L+    ++GRM+  
Sbjct: 392  GYRADLGIYNSIIGGLCRVKQFDKAYKLFEVTVQDDLAPDFSTVNPLLVCCAEMGRMDNF 451

Query: 886  FEILSRMRNLCKPDVCAYTAMIRILVS-EGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTG 1062
            F++L++   L              LV  E  +   L ++EE+K  G    V  Y  L+  
Sbjct: 452  FKLLAQTEKLKFSVAADLEKFFEFLVGKEERIMMALDVFEELKGKGYS-SVPIYNILMGA 510

Query: 1063 LCKGNKVEKGYEFFKEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRAD 1242
            L +  +V+K    F EMR     ++   +   I+  V  G+I  AC+    +I+      
Sbjct: 511  LLEIGEVKKALYLFGEMRGLNLEVNSLSFSIAIQCHVESGEILEACECHNKIIEMYQVPS 570

Query: 1243 LSIYSSMIEGLCNANRVD 1296
            ++ Y+ + +GLC    +D
Sbjct: 571  VAAYNCLTKGLCKIGEID 588


>ref|XP_004140286.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
            [Cucumis sativus] gi|449531474|ref|XP_004172711.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g20740-like [Cucumis sativus]
          Length = 726

 Score =  531 bits (1368), Expect = e-148
 Identities = 268/430 (62%), Positives = 334/430 (77%), Gaps = 11/430 (2%)
 Frame = +1

Query: 43   MPPKSQPSTITNKLYFYYGHR--KPSQNRPTVHGGLFSNRKIINPNPNFYKSSKTLNPNQ 216
            MPP+       +K YFYYGHR   P Q+RPTV+GG F+NR+ + P      +S    P  
Sbjct: 1    MPPQKP-----HKQYFYYGHRHRNPHQHRPTVYGGFFTNRRSLPPPSPHQPTSPKPQP-- 53

Query: 217  CSIDINKWDPNSPQKFP---PTKTQSEKFFSIAQTLSPIARYICDSFRKHKN-WCPSIVK 384
                ++ WDP+ P +     P+ T S+ FFS +  LSPIAR+I D FRK++N W P ++ 
Sbjct: 54   --FLLHNWDPDLPSQKRSNLPSST-SDAFFSTSLRLSPIARFIVDVFRKNQNQWGPPVIS 110

Query: 385  DLDKLRRVPPNLVAEVLKAQ----TDPRISSRFFHWAGKQKGFRHNFASYNAFAYCLNRL 552
            +L+KLRRV P+LVAEVLKA     ++  ++S+FF+WAGKQKGF H FASYNAFAYCLNR 
Sbjct: 111  ELNKLRRVTPDLVAEVLKASHRRDSNSILASKFFYWAGKQKGFHHTFASYNAFAYCLNRH 170

Query: 553  NMFRAADQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLY 732
            N FRAADQ+P+LM  QG  P+EKQFEILIRMH DA RGLRVYY+YEKMK FGV PRVFLY
Sbjct: 171  NRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLY 230

Query: 733  NRILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMR- 909
            NRILDALVKT H+DLA++VY DF+E+GLVEESVTFMIL+KGLCK GR++E+ E+L+RMR 
Sbjct: 231  NRILDALVKTDHLDLALTVYRDFQENGLVEESVTFMILIKGLCKAGRVDEMLELLARMRA 290

Query: 910  NLCKPDVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEK 1089
            NLCKPDV AYTAM+++L S+ NL+GCLR+W+EM+ D V+PDVMAY TL+ GLCK  + +K
Sbjct: 291  NLCKPDVFAYTAMVKVLASKDNLEGCLRVWDEMRADRVEPDVMAYGTLIIGLCKVGRAQK 350

Query: 1090 GYEFFKEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIE 1269
            GYE F+EM+ K  LIDR++YG+LIEAFV D K+GLACDL KDL+DSGYRADL IY S+I+
Sbjct: 351  GYELFQEMKGKRILIDRAIYGTLIEAFVQDEKVGLACDLFKDLVDSGYRADLGIYHSLIK 410

Query: 1270 GLCNANRVDK 1299
            GLCN N+VDK
Sbjct: 411  GLCNVNQVDK 420



 Score = 68.2 bits (165), Expect = 8e-09
 Identities = 65/297 (21%), Positives = 116/297 (39%), Gaps = 38/297 (12%)
 Frame = +1

Query: 517  SYNAFAYCLNRLNMFRAADQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKM 696
            +Y A    L   +      +V D MR    +P    +  LI      GR  + Y ++++M
Sbjct: 299  AYTAMVKVLASKDNLEGCLRVWDEMRADRVEPDVMAYGTLIIGLCKVGRAQKGYELFQEM 358

Query: 697  KNFGVKPRVFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRM 876
            K   +     +Y  +++A V+   V LA  +++D  + G   +   +  L+KGLC V ++
Sbjct: 359  KGKRILIDRAIYGTLIEAFVQDEKVGLACDLFKDLVDSGYRADLGIYHSLIKGLCNVNQV 418

Query: 877  NEVFEILS-RMRNLCKPDVCAYTAMIRILVSEGNLDG----------------------- 984
            ++ +++    +R   KPD      ++ + V  G +D                        
Sbjct: 419  DKAYKLFQLTIREDLKPDFETVKPIMMMYVETGRMDDFWKLVSLLQKLEFSVDDVLSKFL 478

Query: 985  CLRIWEEMK-----------IDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKEMREKGCL 1131
               + EE K           ID     V  Y  +V  L +  +  K  E + +M+     
Sbjct: 479  SFMVEEEDKISVALDVFHGMIDKGYGSVALYNVMVGALHRYGQANKALEIYNDMKNSNIE 538

Query: 1132 IDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGL---CNANRV 1293
             + + Y   +  FV  GKI  AC     +++ G    ++ Y S+ EGL   C  N V
Sbjct: 539  PNSTTYSIALLCFVEIGKIQEACASHNKIVELGSVPSIAAYCSLSEGLFKICEINAV 595


>ref|NP_193806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75211707|sp|Q9SVH3.1|PP328_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g20740 gi|5262214|emb|CAB45840.1| putative protein
            [Arabidopsis thaliana] gi|7268870|emb|CAB79074.1|
            putative protein [Arabidopsis thaliana]
            gi|332658957|gb|AEE84357.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 727

 Score =  524 bits (1349), Expect = e-146
 Identities = 262/424 (61%), Positives = 327/424 (77%), Gaps = 2/424 (0%)
 Frame = +1

Query: 34   NPQMPPKSQPSTITNKLYFYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYKSSKTLNPN 213
            +P+ P  S  S   N   F++GHRKPSQNRPTV+GGLFSNR+ I P  +    S +L  +
Sbjct: 3    SPKPPNLSDKSLKPN---FFHGHRKPSQNRPTVYGGLFSNRQSI-PRVSPQPQSNSL-AH 57

Query: 214  QCSIDINKWDPNSPQKFPPTKTQSEKFFSIAQTLSPIARYICDSFRKHKN-WCPSIVKDL 390
            +   D+ KWDP +    P   + S    + ++ LSPIAR++ D+FRK++N W PS+V +L
Sbjct: 58   RTPFDLRKWDPETHLPPPSPPSHSTVISAASERLSPIARFVLDAFRKNRNHWGPSVVSEL 117

Query: 391  DKLRRVPPNLVAEVLKAQTDPRISSRFFHWAGKQKGFRHNFASYNAFAYCLNRLNMFRAA 570
            +KLRRV P++VAEVLK   D  ++++FFHWAGKQKG++H+FA+YNAFAYCLNR   FRAA
Sbjct: 118  NKLRRVTPSIVAEVLKLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAA 177

Query: 571  DQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLYNRILDA 750
            DQ+P+LM  QG  P+EKQFEILIRMH+D  RGLRVYY+YEKMK FG KPRVFLYNRI+DA
Sbjct: 178  DQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDA 237

Query: 751  LVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMR-NLCKPD 927
            LVK G+ DLA++VYEDFKEDGLVEES TFMILVKGLCK GR+ E+ EIL RMR NLCKPD
Sbjct: 238  LVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPD 297

Query: 928  VCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFK 1107
            V AYTAMI+ LVSEGNLD  LR+W+EM+ D + PDVMAY TLV GLCK  +VE+GYE F 
Sbjct: 298  VFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFM 357

Query: 1108 EMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGLCNAN 1287
            EM+ K  LIDR +Y  LIE FV DGK+  AC+L +DL+DSGY AD+ IY+++I+GLC+ N
Sbjct: 358  EMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVN 417

Query: 1288 RVDK 1299
            +VDK
Sbjct: 418  QVDK 421



 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 68/306 (22%), Positives = 120/306 (39%), Gaps = 41/306 (13%)
 Frame = +1

Query: 502  RHNFASYNAFAYC-----LNRLNMFRAADQVPDLMRMQGNQPTEKQFEILIRMHSDAGRG 666
            R N    + FAY      L       A+ +V D MR    +P    +  L+      GR 
Sbjct: 290  RENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRV 349

Query: 667  LRVYYIYEKMKNFGVKPRVFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMIL 846
             R Y ++ +MK   +     +Y  +++  V  G V  A +++ED  + G + +   +  +
Sbjct: 350  ERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAV 409

Query: 847  VKGLCKVGRMNEVFE-----------------------------------ILSRMRNLCK 921
            +KGLC V ++++ ++                                   +L R+  L  
Sbjct: 410  IKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGY 469

Query: 922  PDVCAYTAMIRILVSEGNLDG-CLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYE 1098
            P     T   ++L ++   +   L ++  +K  G    V  Y  L+  L K   ++K   
Sbjct: 470  PVSDYLTQFFKLLCADEEKNAMALDVFYILKTKG-HGSVSVYNILMEALYKMGDIQKSLS 528

Query: 1099 FFKEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGLC 1278
             F EMR+ G   D S Y   I  FV  G +  AC   + +I+      ++ Y S+ +GLC
Sbjct: 529  LFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLC 588

Query: 1279 NANRVD 1296
                +D
Sbjct: 589  QIGEID 594


>ref|XP_006283187.1| hypothetical protein CARUB_v10004218mg, partial [Capsella rubella]
            gi|482551892|gb|EOA16085.1| hypothetical protein
            CARUB_v10004218mg, partial [Capsella rubella]
          Length = 745

 Score =  521 bits (1342), Expect = e-145
 Identities = 263/436 (60%), Positives = 329/436 (75%), Gaps = 10/436 (2%)
 Frame = +1

Query: 22   RATTNPQMPPKSQPSTITNKLY--FYYGHRKPSQNRPTVHGGLFSNRKIINPNPNFYKSS 195
            R    P+M     P+     L   F+YGHRKPSQNRP V+GGLFSNR+ ++ +    +S+
Sbjct: 8    REEGRPKMKSPKPPNLSDKSLKPSFFYGHRKPSQNRPIVYGGLFSNRQSLSRDSPQPQSN 67

Query: 196  KTLNPNQCSIDINKWDPNS------PQKFPPTKTQSEKFFSIAQTLSPIARYICDSFRKH 357
               +  +   D+ KWDP S          PP+   S    + ++ LSPIAR++ D+FRK+
Sbjct: 68   AVAH--RTPFDLRKWDPESHLPSERASSSPPS--HSTGISAASERLSPIARFVLDAFRKN 123

Query: 358  KN-WCPSIVKDLDKLRRVPPNLVAEVLKAQTDPRISSRFFHWAGKQKGFRHNFASYNAFA 534
            +N W PS+V +L+KLRRV P++VAEVLK   D  ++++FFHWAGKQKG+RH+FASYNAFA
Sbjct: 124  RNHWGPSVVSELNKLRRVTPSIVAEVLKLGNDAAVAAKFFHWAGKQKGYRHDFASYNAFA 183

Query: 535  YCLNRLNMFRAADQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKMKNFGVK 714
            YCLNR   FRAADQ+P+LM  QG  P+EKQFEILIRMH+D  RGLRVYY+YEKMK FG K
Sbjct: 184  YCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNKRGLRVYYVYEKMKKFGFK 243

Query: 715  PRVFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEI 894
            PRVFLYNRI+DALVK G+ DLA++VYEDFKEDGLVEES TFMILVKGLCK GR+ E+ EI
Sbjct: 244  PRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEI 303

Query: 895  LSRMR-NLCKPDVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCK 1071
            L RMR NLCKPDV AYTAMI+ LVSEGN+D  L++W+EMK D + PDVMAY TLVTGLC+
Sbjct: 304  LQRMRANLCKPDVFAYTAMIKTLVSEGNMDASLQVWDEMKRDEIKPDVMAYGTLVTGLCR 363

Query: 1072 GNKVEKGYEFFKEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSI 1251
              +VE+GYE F EM+EK  LIDR +Y  LIE FV +GK+  AC+L +DL+DSGY ADL I
Sbjct: 364  DGRVERGYELFMEMKEKQILIDREIYRVLIEGFVAEGKVRSACNLWEDLVDSGYIADLGI 423

Query: 1252 YSSMIEGLCNANRVDK 1299
            Y+++I+GLC+ N+VDK
Sbjct: 424  YNAVIKGLCSVNQVDK 439



 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 66/296 (22%), Positives = 117/296 (39%), Gaps = 36/296 (12%)
 Frame = +1

Query: 517  SYNAFAYCLNRLNMFRAADQVPDLMRMQGNQPTEKQFEILIRMHSDAGRGLRVYYIYEKM 696
            +Y A    L       A+ QV D M+    +P    +  L+      GR  R Y ++ +M
Sbjct: 318  AYTAMIKTLVSEGNMDASLQVWDEMKRDEIKPDVMAYGTLVTGLCRDGRVERGYELFMEM 377

Query: 697  KNFGVKPRVFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRM 876
            K   +     +Y  +++  V  G V  A +++ED  + G + +   +  ++KGLC V ++
Sbjct: 378  KEKQILIDREIYRVLIEGFVAEGKVRSACNLWEDLVDSGYIADLGIYNAVIKGLCSVNQV 437

Query: 877  NEVFEI--------LSRMRNLCKPDVCAYTAMIRIL------------------------ 960
            ++ +++        L        P + AY  M R++                        
Sbjct: 438  DKAYKLFQIAIDEELEPDFETLSPILVAYVVMNRLIDFSNLLERIGESRYPLADYISQFF 497

Query: 961  ----VSEGNLDGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKEMREKGC 1128
                  E      L +++ +K  G    V+ Y  L+  LCK   ++K    F EM++ G 
Sbjct: 498  KLLCADEEKRTMALDVFDVVKTKG-HSSVLVYNILMETLCKMGNIQKCLSLFYEMKDFGF 556

Query: 1129 LIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGYRADLSIYSSMIEGLCNANRVD 1296
              D S Y   I  FV  G +  AC   + +I       ++ Y S+ +GLC    +D
Sbjct: 557  EPDSSSYSIAICCFVEKGDVQEACSCHEKIIAMSCFPSIAAYLSLTKGLCQIGEID 612



 Score = 67.8 bits (164), Expect = 1e-08
 Identities = 47/187 (25%), Positives = 89/187 (47%), Gaps = 5/187 (2%)
 Frame = +1

Query: 721  VFLYNRILDALVKTGHVDLAISVYEDFKEDGLVEESVTFMILVKGLCKVGRMNEVFEILS 900
            V +YN +++ L K G++   +S++ + K+ G   +S ++ I +    + G + E      
Sbjct: 525  VLVYNILMETLCKMGNIQKCLSLFYEMKDFGFEPDSSSYSIAICCFVEKGDVQEACSCHE 584

Query: 901  RMRNL-CKPDVCAYTAMIRILVSEGNLDGCLRIWEEMKIDGVD--PDVMAYTTLVTGLCK 1071
            ++  + C P + AY ++ + L   G +D  + +  E  +  V+  P    Y   V  +CK
Sbjct: 585  KIIAMSCFPSIAAYLSLTKGLCQIGEIDAVMLLVREC-LGNVESGPMEFKYALRVCHVCK 643

Query: 1072 GNKVEKGYEFFKEMREKGCLIDRSMYGSLIEAFVVDGKIGLACDLLKDLIDSGY--RADL 1245
            GNK EK  E   EM ++G  I+  +Y S+I      G I  A ++  +L        AD+
Sbjct: 644  GNKSEKVLEVLDEMNQEGVSINEVIYCSIIFGMCKHGTIKAAREVFTELKKRKIMTEADM 703

Query: 1246 SIYSSMI 1266
             +Y  ++
Sbjct: 704  VVYDELL 710



 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 39/176 (22%), Positives = 82/176 (46%), Gaps = 2/176 (1%)
 Frame = +1

Query: 625  FEILIRMHSDAGRGLRVYYIYEKMKNFGVKPRVFLYNRILDALVKTGHVDLAISVYEDFK 804
            + IL+      G   +   ++ +MK+FG +P    Y+  +   V+ G V  A S +E   
Sbjct: 528  YNILMETLCKMGNIQKCLSLFYEMKDFGFEPDSSSYSIAICCFVEKGDVQEACSCHEKII 587

Query: 805  EDGLVEESVTFMILVKGLCKVGRMNEVFEILSRMRNLCKPDVCAYTAMIRIL-VSEGN-L 978
                      ++ L KGLC++G ++ V  ++       +     +   +R+  V +GN  
Sbjct: 588  AMSCFPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALRVCHVCKGNKS 647

Query: 979  DGCLRIWEEMKIDGVDPDVMAYTTLVTGLCKGNKVEKGYEFFKEMREKGCLIDRSM 1146
            +  L + +EM  +GV  + + Y +++ G+CK   ++   E F E++++  + +  M
Sbjct: 648  EKVLEVLDEMNQEGVSINEVIYCSIIFGMCKHGTIKAAREVFTELKKRKIMTEADM 703