BLASTX nr result

ID: Akebia27_contig00036326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00036326
         (442 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...    64   2e-08
ref|XP_007051013.1| RNA helicase family protein, putative [Theob...    60   2e-07

>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
           vinifera]
          Length = 1414

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 46/130 (35%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
 Frame = +3

Query: 6   EKRRRAVQFSKIGLEMPQDDRPSKKRDKEGVSDQSGSDLDEGYLKQECSENDALQAMVVE 185
           EKRRRAV+FSK GLEMP  DRP K +D E        D ++   KQE  E+DA+   +V+
Sbjct: 189 EKRRRAVRFSKAGLEMPHSDRPFKSQDGE-----MEPDSNKIQSKQEFDESDAMWPRMVQ 243

Query: 186 REDCNNDCAPLDTYQERTFSSIIDTNEGSRSALPAYKSSVSHME---EDQKIPLLIPCDY 356
           RE  +N    L    E   S+ +  N      LPA + S  + +   +D++         
Sbjct: 244 REVLSNASISLGFTSELVCSTELAVNSRHSPTLPAKEVSEKNYDTSMQDRRNSTPTSTTA 303

Query: 357 EGITNTKSQD 386
           +G  N KS+D
Sbjct: 304 DGQKNIKSKD 313


>ref|XP_007051013.1| RNA helicase family protein, putative [Theobroma cacao]
           gi|508703274|gb|EOX95170.1| RNA helicase family protein,
           putative [Theobroma cacao]
          Length = 1264

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
 Frame = +3

Query: 3   REKRRRAVQFSKIGLEMPQDDRPSKKRDKEGVSDQS--GSDLDEGYLKQECSENDALQAM 176
           REKRRRAVQF K GLE+P  D+ SK RD + +S  S    +L+E   +++ S+N   Q +
Sbjct: 109 REKRRRAVQFLKAGLELPYVDQSSKGRDGDNLSSSSEPEPELEEINSRKDISKNHIRQPL 168

Query: 177 VVEREDCNNDCAPLDTYQERTF 242
           ++E E   N   PL + QE  F
Sbjct: 169 IIEIEVARNALGPLASSQEPVF 190


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