BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00036223
         (506 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005651202.1| hypothetical protein COCSUDRAFT_64596 [Cocco...    77   3e-12
gb|AGB85044.1| chloroplast PetM subunit of cytochrome b6f comple...    75   9e-12
ref|XP_002953725.1| hypothetical protein VOLCADRAFT_109895 [Volv...    75   9e-12
ref|XP_001694096.1| cytochrome b6f complex PetM subunit [Chlamyd...    71   1e-10
dbj|BAA78590.1| hypothetical protein [Chlamydomonas sp. HS-5]          62   6e-08
ref|XP_007511794.1| PetM subunit of cytochrome b6f complex [Bath...    59   5e-07
ref|XP_005850853.1| hypothetical protein CHLNCDRAFT_15398, parti...    55   8e-06

>ref|XP_005651202.1| hypothetical protein COCSUDRAFT_64596 [Coccomyxa subellipsoidea
           C-169] gi|384253183|gb|EIE26658.1| hypothetical protein
           COCSUDRAFT_64596 [Coccomyxa subellipsoidea C-169]
          Length = 117

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 51/116 (43%), Positives = 66/116 (56%)
 Frame = -1

Query: 473 MSAVAQSQLVRTSTCQRSQCFTSVRPAVVGVPALRPRSITNRASTSSQPLRQNLMQSPAR 294
           MSA   S      T + S+    VR ++     LRP+    R+  S+   +    Q+   
Sbjct: 5   MSAAITSSSACVCTAKTSR--RPVRASLGHAAGLRPQGAPLRSLQSTLVAQPRAKQTQTL 62

Query: 293 SSSVATQAGATELYQLADEGALISGTAAVLFACTLIGLAVGFVLLRVEALVEEGKI 126
             +V T A A E+YQ+ADE + ISG A V FA TL+GLAVGFVLLRVEAL EEGK+
Sbjct: 63  RQNVKT-AAAMEIYQVADELSYISGVAGVCFAITLVGLAVGFVLLRVEALTEEGKL 117


>gb|AGB85044.1| chloroplast PetM subunit of cytochrome b6f complex, partial
           [Auxenochlorella protothecoides]
          Length = 154

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 49/120 (40%), Positives = 66/120 (55%), Gaps = 5/120 (4%)
 Frame = -1

Query: 470 SAVAQSQLVRTSTCQRSQCFTSVRPAVVGVPAL-----RPRSITNRASTSSQPLRQNLMQ 306
           S    ++    +T Q  Q   ++ PA    P L       R I  R++ S +P RQ +  
Sbjct: 2   SCAHTTEATTLATMQALQAHATLIPAASLGPRLPLRATAVRGIHGRSAASVRPARQ-ITT 60

Query: 305 SPARSSSVATQAGATELYQLADEGALISGTAAVLFACTLIGLAVGFVLLRVEALVEEGKI 126
            P +   V  QA  +E+ QLA EG  I+G A+V+F  TL+GLAVGFV+LR EAL EEGKI
Sbjct: 61  VPCQLRRVRAQAIPSEIAQLAGEGGFIAGVASVMFGITLLGLAVGFVILRFEALTEEGKI 120


>ref|XP_002953725.1| hypothetical protein VOLCADRAFT_109895 [Volvox carteri f.
           nagariensis] gi|300261134|gb|EFJ45349.1| hypothetical
           protein VOLCADRAFT_109895 [Volvox carteri f.
           nagariensis]
          Length = 99

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 47/96 (48%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
 Frame = -1

Query: 401 RPAVVGVPALRPRSITNRASTSSQPLRQNL----MQSPARSSSVATQAGATELYQLADEG 234
           R A  GV A  PRS T R + +   +R  L     ++PA S  VAT+A   EL  +A EG
Sbjct: 7   RTACSGVAA--PRSATTRVAAARPAVRPTLRTVGQKAPAPSRGVATKA-INELAMIAGEG 63

Query: 233 ALISGTAAVLFACTLIGLAVGFVLLRVEALVEEGKI 126
             I+GTA  +   TL+GLA+GFVLLRVE+LVEEGK+
Sbjct: 64  GFIAGTALTMVGITLVGLAIGFVLLRVESLVEEGKL 99


>ref|XP_001694096.1| cytochrome b6f complex PetM subunit [Chlamydomonas reinhardtii]
           gi|2493687|sp|Q42496.1|PETM_CHLRE RecName:
           Full=Cytochrome b6-f complex subunit 7, chloroplastic;
           AltName: Full=Cytochrome b6-f complex 4 kDa subunit;
           AltName: Full=Cytochrome b6-f complex subunit PetM;
           AltName: Full=Cytochrome b6-f complex subunit VII;
           Flags: Precursor gi|1039440|gb|AAC49525.1| cytochrome
           b6f 4.6 kDa subunit PetM [Chlamydomonas reinhardtii]
           gi|1050459|emb|CAA63221.1| 4-kDa cytochrome b6/f subunit
           [Chlamydomonas reinhardtii] gi|74272641|gb|ABA01116.1|
           chloroplast cytochrome b6f 4.6 kDa subunit
           [Chlamydomonas incerta] gi|158277263|gb|EDP03032.1|
           cytochrome b6f complex PetM subunit [Chlamydomonas
           reinhardtii] gi|1589393|prf||2211245A cytochrome
           b6f:SUBUNIT=4kD
          Length = 99

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
 Frame = -1

Query: 407 SVRPAVVGVPALRPRSITNRASTSSQPLRQNLM---QSPARSSSVATQAGATELYQLADE 237
           + R A  GV A  PRS T R + +   +R +L    Q  A S  VAT+A   EL  +A E
Sbjct: 6   AARSACCGVAA--PRSSTVRVAAARPAVRPSLRTAGQKAAPSRGVATKA-VNELAMIAGE 62

Query: 236 GALISGTAAVLFACTLIGLAVGFVLLRVEALVEEGKI 126
              I+GTA  +   TL+GLA+GFVLLRVE+LVEEGKI
Sbjct: 63  AEFIAGTALTMVGMTLVGLAIGFVLLRVESLVEEGKI 99


>dbj|BAA78590.1| hypothetical protein [Chlamydomonas sp. HS-5]
          Length = 97

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 42/88 (47%), Positives = 50/88 (56%)
 Frame = -1

Query: 398 PAVVGVPALRPRSITNRASTSSQPLRQNLMQSPARSSSVATQAGATELYQLADEGALISG 219
           P    V + RP    NRA+        +   SPAR   VAT AG  E+ Q+A E   I+G
Sbjct: 15  PRAARVSSARPTLSVNRAALRKAAAAPS--SSPARG--VATAAGV-EIAQVAGEAGFIAG 69

Query: 218 TAAVLFACTLIGLAVGFVLLRVEALVEE 135
           TA  +   TL+GLAVGFVLLRVEA VEE
Sbjct: 70  TAFTMIGITLLGLAVGFVLLRVEAAVEE 97


>ref|XP_007511794.1| PetM subunit of cytochrome b6f complex [Bathycoccus prasinos]
           gi|412988579|emb|CCO17915.1| PetM subunit of cytochrome
           b6f complex [Bathycoccus prasinos]
          Length = 160

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 30/62 (48%), Positives = 39/62 (62%)
 Frame = -1

Query: 323 RQNLMQSPARSSSVATQAGATELYQLADEGALISGTAAVLFACTLIGLAVGFVLLRVEAL 144
           ++N++Q  +R S         E+ Q+AD  A I   A  LF CTLIGLA+GFVLLRVE+ 
Sbjct: 96  KRNVVQQKSRKSVATAALSPMEISQIADAAAEIGDVATTLFGCTLIGLALGFVLLRVEST 155

Query: 143 VE 138
           VE
Sbjct: 156 VE 157


>ref|XP_005850853.1| hypothetical protein CHLNCDRAFT_15398, partial [Chlorella
           variabilis] gi|307110515|gb|EFN58751.1| hypothetical
           protein CHLNCDRAFT_15398, partial [Chlorella variabilis]
          Length = 59

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 31/57 (54%), Positives = 39/57 (68%)
 Frame = -1

Query: 296 RSSSVATQAGATELYQLADEGALISGTAAVLFACTLIGLAVGFVLLRVEALVEEGKI 126
           R ++V  QA + E+ QLA E   I G + V+   TLIGLA GFVLLRVE+L EEGK+
Sbjct: 4   RRAAVQPQA-SMEVAQLAGEAGFIFGVSGVMVGITLIGLAFGFVLLRVESLAEEGKV 59