BLASTX nr result

ID: Akebia27_contig00036038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00036038
         (708 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB47690.1| hypothetical protein L484_010474 [Morus notabilis]     428   e-117
ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi...   425   e-117
ref|XP_007215021.1| hypothetical protein PRUPE_ppa003340mg [Prun...   424   e-116
ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containi...   421   e-115
ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containi...   419   e-115
ref|XP_002324029.2| hypothetical protein POPTR_0017s11210g [Popu...   415   e-114
ref|XP_007032420.1| Tetratricopeptide repeat (TPR)-like superfam...   412   e-113
gb|ACU25777.1| pentatricopeptide repeat-containing protein [Petr...   411   e-112
ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citr...   409   e-112
gb|ACU25773.1| pentatricopeptide repeat-containing protein [Stac...   409   e-112
ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containi...   409   e-112
gb|ACU25774.1| pentatricopeptide repeat-containing protein [Stac...   408   e-112
ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containi...   408   e-111
ref|XP_006482520.1| PREDICTED: pentatricopeptide repeat-containi...   407   e-111
gb|ACU25775.1| pentatricopeptide repeat-containing protein [Bouc...   405   e-111
ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Caps...   404   e-110
ref|XP_002870737.1| pentatricopeptide repeat-containing protein ...   404   e-110
ref|XP_002517447.1| pentatricopeptide repeat-containing protein,...   403   e-110
ref|NP_198814.1| pentatricopeptide repeat-containing protein [Ar...   402   e-110
gb|ACU25771.1| pentatricopeptide repeat-containing protein [Cith...   402   e-110

>gb|EXB47690.1| hypothetical protein L484_010474 [Morus notabilis]
          Length = 688

 Score =  428 bits (1100), Expect = e-117
 Identities = 214/235 (91%), Positives = 226/235 (96%)
 Frame = -1

Query: 705  EMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLD 526
            EMRAA V PDTVSYSTLLT +VEN++F+EALS+FSEMNEVR  LDLTTCNIMIDVYGQLD
Sbjct: 296  EMRAAGVLPDTVSYSTLLTMYVENQKFIEALSVFSEMNEVRCRLDLTTCNIMIDVYGQLD 355

Query: 525  MAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYN 346
            MAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYN
Sbjct: 356  MAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYN 415

Query: 345  TMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSS 166
            TMIKIYGKSLEHEKATNLVQEMQ RGI PNA+TYSTIISIWGKAGKLDRAA+LFQKLRSS
Sbjct: 416  TMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAILFQKLRSS 475

Query: 165  GVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
            GVEIDQVLYQTMIVAYE+AGL+ HAKRLLHELKRPDNIPRETA++IL GAGR+EE
Sbjct: 476  GVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNIPRETAITILAGAGRLEE 530



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 57/243 (23%), Positives = 107/243 (44%), Gaps = 35/243 (14%)
 Frame = -1

Query: 681 PDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDMAKEADRL 502
           P   +Y+  L   +  +++  A  +F EM +  +  D  T + +I  +G+  M   A   
Sbjct: 164 PSVFAYNVALRNVLRAKQWQVAHGLFDEMRQRALAPDRYTYSTLITYFGKEGMFDAALSW 223

Query: 501 FWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 322
              M +  +  ++V Y+ L+ +  +   + +AI +F  ++   I  ++V YN+MI ++GK
Sbjct: 224 LQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKWSGITPDLVAYNSMINVFGK 283

Query: 321 SLEHEKATNLVQEMQNRGIMPNAVTYSTI------------------------------- 235
           +    +A  L+ EM+  G++P+ V+YST+                               
Sbjct: 284 AKLFREARLLITEMRAAGVLPDTVSYSTLLTMYVENQKFIEALSVFSEMNEVRCRLDLTT 343

Query: 234 ----ISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELK 67
               I ++G+      A  LF  +R  G+E + V Y T++  Y  A L G A  L   ++
Sbjct: 344 CNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQ 403

Query: 66  RPD 58
           R D
Sbjct: 404 RKD 406



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 46/171 (26%), Positives = 85/171 (49%)
 Frame = -1

Query: 534 QLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVV 355
           + D  +    L W   +    P+V +YN  LR    A+ +  A  LF  M+++ +  +  
Sbjct: 143 ETDWQRSLAILDWINEQALYTPSVFAYNVALRNVLRAKQWQVAHGLFDEMRQRALAPDRY 202

Query: 354 TYNTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKL 175
           TY+T+I  +GK    + A + +Q+M+   +  + V YS +I +  K     +A  +F +L
Sbjct: 203 TYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRL 262

Query: 174 RSSGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILV 22
           + SG+  D V Y +MI  + +A L   A+ L+ E++    +P   + S L+
Sbjct: 263 KWSGITPDLVAYNSMINVFGKAKLFREARLLITEMRAAGVLPDTVSYSTLL 313



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 42/222 (18%), Positives = 102/222 (45%)
 Frame = -1

Query: 708  EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
            +EM+   + P+ ++YST+++ + +  +   A  +F ++    V +D      MI  Y + 
Sbjct: 435  QEMQKRGIEPNAITYSTIISIWGKAGKLDRAAILFQKLRSSGVEIDQVLYQTMIVAYEKA 494

Query: 528  DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
             +   A RL   +++    P+ +   T + +   A    EA  +FR        +++  +
Sbjct: 495  GLVAHAKRLLHELKR----PDNIPRETAITILAGAGRLEEATWVFRQASDAGEIKDISVF 550

Query: 348  NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
            + MI+++ K+ ++   T +  +M+  G  P++   + +++ +GK    ++A  ++++++ 
Sbjct: 551  SCMIELFSKNKKYANLTEVFDKMRGVGYFPDSNVIALVLNAYGKLRDFEKADAVYKEMQE 610

Query: 168  SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRE 43
             G      ++  MI  Y         + L   L+   NI +E
Sbjct: 611  EGCVFSDEVHFQMISLYGARKDFKMVEELFERLESDPNINKE 652


>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic [Vitis vinifera]
           gi|296087770|emb|CBI35026.3| unnamed protein product
           [Vitis vinifera]
          Length = 675

 Score =  425 bits (1093), Expect = e-117
 Identities = 211/235 (89%), Positives = 224/235 (95%)
 Frame = -1

Query: 705 EMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLD 526
           EMRA  V PDTVSYSTLL+ +VEN +++EALS+FSEMNEVR PLDLTTCN+MIDVYGQLD
Sbjct: 285 EMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNVMIDVYGQLD 344

Query: 525 MAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYN 346
           MAKEADRLFWSMRKMGIEP +VSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYN
Sbjct: 345 MAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYN 404

Query: 345 TMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSS 166
           TMIKIYGKSLEHEKATNLVQEMQNRGI PNA+TYSTIISIW KAGKLDRAAMLFQKLRSS
Sbjct: 405 TMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSS 464

Query: 165 GVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           G+EIDQVLYQTMIVAYERAGL+ HAKRLLHELKRPDNIPRETA++IL GAGRIEE
Sbjct: 465 GIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAGAGRIEE 519



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 52/210 (24%), Positives = 107/210 (50%)
 Frame = -1

Query: 693 AEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDMAKE 514
           A  +P   +Y+ ++   +  +++  A  +F EM +  +  D  T + +I  +G+  M   
Sbjct: 149 ASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMFDS 208

Query: 513 ADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 334
           A      M +  +  ++V Y+ L+ +  +   + +AI +F  ++R  I  ++V YN+MI 
Sbjct: 209 ALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMIN 268

Query: 333 IYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEI 154
           ++GK+    +A  L+ EM+  G+MP+ V+YST++S++ + GK   A  +F ++      +
Sbjct: 269 VFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPL 328

Query: 153 DQVLYQTMIVAYERAGLIGHAKRLLHELKR 64
           D      MI  Y +  +   A RL   +++
Sbjct: 329 DLTTCNVMIDVYGQLDMAKEADRLFWSMRK 358



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 4/180 (2%)
 Frame = -1

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
           D  +    L W   +    P+V +YN ++R    A+ +  A  LF  M+++ +  +  TY
Sbjct: 134 DWQRSLALLDWINEEASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTY 193

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           +T+I  +GK    + A + +Q+M+   +  + V YS +I +  K     +A  +F +L+ 
Sbjct: 194 STLITHFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKR 253

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELK----RPDNIPRETAVSILVGAGRIEE 1
           SG+  D V Y +MI  + +A L   A+ LL E++     PD +   T +S+ V  G+  E
Sbjct: 254 SGISPDLVAYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVE 313



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 43/240 (17%), Positives = 103/240 (42%), Gaps = 4/240 (1%)
 Frame = -1

Query: 708  EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
            +EM+   + P+ ++YST+++ + +  +   A  +F ++    + +D      MI  Y + 
Sbjct: 424  QEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERA 483

Query: 528  DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
             +   A RL   +++    P+ +   T + +   A    EA  +FR        +++  +
Sbjct: 484  GLVAHAKRLLHELKR----PDNIPRETAITILAGAGRIEEATWVFRQAFDAGEVKDITVF 539

Query: 348  NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
              MI ++ ++ +H     +  +M+  G  P++   + +++  GK  + ++A  +++++  
Sbjct: 540  GCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSNVIALVLNACGKLREFEKADAIYKEMEE 599

Query: 168  SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRE----TAVSILVGAGRIEE 1
             G      ++  M+  Y   G       L   L    NI ++       SI   A R+ +
Sbjct: 600  EGCVFSDEVHFQMLSLYGARGDFQMVDSLFERLDSDPNINKKELHLVVASIYERANRLND 659


>ref|XP_007215021.1| hypothetical protein PRUPE_ppa003340mg [Prunus persica]
           gi|462411171|gb|EMJ16220.1| hypothetical protein
           PRUPE_ppa003340mg [Prunus persica]
          Length = 584

 Score =  424 bits (1091), Expect = e-116
 Identities = 210/236 (88%), Positives = 225/236 (95%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EMRA  V PDTVSYSTLL+ ++EN++F+EALS+FSEMNEV+ PLDLTTCNIMIDVYGQL
Sbjct: 193 KEMRAVGVLPDTVSYSTLLSMYIENQKFVEALSVFSEMNEVKCPLDLTTCNIMIDVYGQL 252

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
           DMAKEADRLFWSMRKMG+EPNVVSYNTLLRVYG+AELFGEAIHLFRLMQR DIEQNVVTY
Sbjct: 253 DMAKEADRLFWSMRKMGLEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRMDIEQNVVTY 312

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           NTMIKIYGKSLEHEKATNLVQEMQN GI PNA+TYSTIISIWGKAGKLDRAAMLFQKLRS
Sbjct: 313 NTMIKIYGKSLEHEKATNLVQEMQNSGIQPNAMTYSTIISIWGKAGKLDRAAMLFQKLRS 372

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           SGVEIDQVLYQTMIVAYER GL+ HAKRLLHELKRPDNIPRETA++IL GAGRIEE
Sbjct: 373 SGVEIDQVLYQTMIVAYERVGLVAHAKRLLHELKRPDNIPRETAITILAGAGRIEE 428



 Score = 83.6 bits (205), Expect = 6e-14
 Identities = 51/220 (23%), Positives = 110/220 (50%)
 Frame = -1

Query: 681 PDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDMAKEADRL 502
           P   +Y+ ++   +  +++  A  +F EM +  +  D  T + +I  +G+  M   A   
Sbjct: 62  PSVFAYNVVIRNVLRAKQWEIAHGLFEEMRQRALAPDRYTYSTLITSFGKAGMFDSALSW 121

Query: 501 FWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 322
              M +  +  ++V Y+ L+ +  +   + +AI +F  ++R  I  ++V YN+MI ++GK
Sbjct: 122 LQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRLGIMPDLVAYNSMINVFGK 181

Query: 321 SLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVL 142
           +    +A  L++EM+  G++P+ V+YST++S++ +  K   A  +F ++      +D   
Sbjct: 182 AKLFREARLLLKEMRAVGVLPDTVSYSTLLSMYIENQKFVEALSVFSEMNEVKCPLDLTT 241

Query: 141 YQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILV 22
              MI  Y +  +   A RL   +++    P   + + L+
Sbjct: 242 CNIMIDVYGQLDMAKEADRLFWSMRKMGLEPNVVSYNTLL 281



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 4/165 (2%)
 Frame = -1

Query: 504 LFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 325
           L W   +    P+V +YN ++R    A+ +  A  LF  M+++ +  +  TY+T+I  +G
Sbjct: 51  LDWINEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFEEMRQRALAPDRYTYSTLITSFG 110

Query: 324 KSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQV 145
           K+   + A + +Q+M+   +  + V YS +I +  K     +A  +F +L+  G+  D V
Sbjct: 111 KAGMFDSALSWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRLGIMPDLV 170

Query: 144 LYQTMIVAYERAGLIGHAKRLLHELKR----PDNIPRETAVSILV 22
            Y +MI  + +A L   A+ LL E++     PD +   T +S+ +
Sbjct: 171 AYNSMINVFGKAKLFREARLLLKEMRAVGVLPDTVSYSTLLSMYI 215


>ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Solanum lycopersicum]
          Length = 665

 Score =  421 bits (1082), Expect = e-115
 Identities = 209/236 (88%), Positives = 224/236 (94%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EMR+  V PDTVSYSTLLT +VEN++FLEALS+FSEMNEV+ PLDLTTCNIMIDVYGQL
Sbjct: 276 KEMRSVGVLPDTVSYSTLLTMYVENQKFLEALSVFSEMNEVKCPLDLTTCNIMIDVYGQL 335

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
           DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRK+IEQNVVTY
Sbjct: 336 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKNIEQNVVTY 395

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           NTMIKIYGK+LEHEKA NL+QEMQN GI PNA+TYSTIISIW K GKLDRAAMLFQKLRS
Sbjct: 396 NTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAITYSTIISIWAKVGKLDRAAMLFQKLRS 455

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           SGVEIDQVLYQTMIVAYERAGL+ HAKRLLHELKRPDNIPRETA++IL G+GRIEE
Sbjct: 456 SGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAGSGRIEE 511



 Score =  109 bits (273), Expect = 8e-22
 Identities = 77/274 (28%), Positives = 134/274 (48%), Gaps = 39/274 (14%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EMR   ++PD  +YSTL+T F +   F +ALS   +M +  V  DL     +I++  +L
Sbjct: 171 DEMRQRALSPDRYTYSTLITYFGKEGLFDDALSWLQKMEQDHVSGDLVLYCNLIELSRKL 230

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
               +A  +F  ++  GI P++V+YNT++ V+G+A+LF EA  L + M+   +  + V+Y
Sbjct: 231 CDYTKAISIFSRLKTSGITPDLVAYNTMINVFGKAKLFREAQLLVKEMRSVGVLPDTVSY 290

Query: 348 NT-----------------------------------MIKIYGKSLEHEKATNLVQEMQN 274
           +T                                   MI +YG+    ++A  L   M+ 
Sbjct: 291 STLLTMYVENQKFLEALSVFSEMNEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFWSMRK 350

Query: 273 RGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLIGH 94
            GI PN V+Y+T++ ++G+A     A  LF+ ++   +E + V Y TMI  Y +      
Sbjct: 351 MGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKNIEQNVVTYNTMIKIYGKTLEHEK 410

Query: 93  AKRLLHELK----RPDNIPRETAVSILVGAGRIE 4
           A  L+ E++     P+ I   T +SI    G+++
Sbjct: 411 ANNLIQEMQNIGIEPNAITYSTIISIWAKVGKLD 444



 Score = 83.2 bits (204), Expect = 8e-14
 Identities = 51/220 (23%), Positives = 109/220 (49%)
 Frame = -1

Query: 681 PDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDMAKEADRL 502
           P   +Y+  L   +  +++  A  +F EM +  +  D  T + +I  +G+  +  +A   
Sbjct: 145 PSVFAYNVALRNVLRAKQWQLAYGLFDEMRQRALSPDRYTYSTLITYFGKEGLFDDALSW 204

Query: 501 FWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 322
              M +  +  ++V Y  L+ +  +   + +AI +F  ++   I  ++V YNTMI ++GK
Sbjct: 205 LQKMEQDHVSGDLVLYCNLIELSRKLCDYTKAISIFSRLKTSGITPDLVAYNTMINVFGK 264

Query: 321 SLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVL 142
           +    +A  LV+EM++ G++P+ V+YST+++++ +  K   A  +F ++      +D   
Sbjct: 265 AKLFREAQLLVKEMRSVGVLPDTVSYSTLLTMYVENQKFLEALSVFSEMNEVKCPLDLTT 324

Query: 141 YQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILV 22
              MI  Y +  +   A RL   +++    P   + + L+
Sbjct: 325 CNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLL 364


>ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Solanum tuberosum]
          Length = 668

 Score =  419 bits (1077), Expect = e-115
 Identities = 209/236 (88%), Positives = 222/236 (94%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EMR+  V PDTVSYSTLLT +VEN++FLEALS+FSEMNEV+  LDLTTCNIMIDVYGQL
Sbjct: 279 KEMRSVGVLPDTVSYSTLLTMYVENQKFLEALSVFSEMNEVKCSLDLTTCNIMIDVYGQL 338

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
           DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRK IEQNVVTY
Sbjct: 339 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKSIEQNVVTY 398

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           NTMIKIYGK+LEHEKA NL+QEMQN GI PNA+TYSTIISIWGK GKLDRAAMLFQKLRS
Sbjct: 399 NTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRS 458

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           SGVEIDQVLYQTMIVAYERAGL+ HAKRLLHELKRPDNIPRETA+ IL G+GRIEE
Sbjct: 459 SGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMILAGSGRIEE 514



 Score =  108 bits (271), Expect = 1e-21
 Identities = 77/274 (28%), Positives = 134/274 (48%), Gaps = 39/274 (14%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EMR   ++PD  +YSTL+T F +   F +ALS   +M +  V  DL     +I++  +L
Sbjct: 174 DEMRQRALSPDRYTYSTLITYFGKEGLFDDALSWLQKMEQDHVSGDLVLYCNLIELSRKL 233

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
               +A  +F  ++  GI P++V+YNT++ V+G+A+LF EA  L + M+   +  + V+Y
Sbjct: 234 CDYTKAISIFSRLKTSGITPDLVAYNTMINVFGKAKLFREAQLLIKEMRSVGVLPDTVSY 293

Query: 348 NT-----------------------------------MIKIYGKSLEHEKATNLVQEMQN 274
           +T                                   MI +YG+    ++A  L   M+ 
Sbjct: 294 STLLTMYVENQKFLEALSVFSEMNEVKCSLDLTTCNIMIDVYGQLDMAKEADRLFWSMRK 353

Query: 273 RGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLIGH 94
            GI PN V+Y+T++ ++G+A     A  LF+ ++   +E + V Y TMI  Y +      
Sbjct: 354 MGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKSIEQNVVTYNTMIKIYGKTLEHEK 413

Query: 93  AKRLLHELK----RPDNIPRETAVSILVGAGRIE 4
           A  L+ E++     P+ I   T +SI    G+++
Sbjct: 414 ANNLIQEMQNIGIEPNAITYSTIISIWGKVGKLD 447



 Score = 83.2 bits (204), Expect = 8e-14
 Identities = 50/220 (22%), Positives = 109/220 (49%)
 Frame = -1

Query: 681 PDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDMAKEADRL 502
           P   +Y+  L   +  +++  A  +F EM +  +  D  T + +I  +G+  +  +A   
Sbjct: 148 PSVFAYNVALRNVLRAKQWQLAYGLFDEMRQRALSPDRYTYSTLITYFGKEGLFDDALSW 207

Query: 501 FWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 322
              M +  +  ++V Y  L+ +  +   + +AI +F  ++   I  ++V YNTMI ++GK
Sbjct: 208 LQKMEQDHVSGDLVLYCNLIELSRKLCDYTKAISIFSRLKTSGITPDLVAYNTMINVFGK 267

Query: 321 SLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVL 142
           +    +A  L++EM++ G++P+ V+YST+++++ +  K   A  +F ++      +D   
Sbjct: 268 AKLFREAQLLIKEMRSVGVLPDTVSYSTLLTMYVENQKFLEALSVFSEMNEVKCSLDLTT 327

Query: 141 YQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILV 22
              MI  Y +  +   A RL   +++    P   + + L+
Sbjct: 328 CNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLL 367


>ref|XP_002324029.2| hypothetical protein POPTR_0017s11210g [Populus trichocarpa]
           gi|550320029|gb|EEF04162.2| hypothetical protein
           POPTR_0017s11210g [Populus trichocarpa]
          Length = 639

 Score =  415 bits (1067), Expect = e-114
 Identities = 204/236 (86%), Positives = 221/236 (93%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EMR   V PDTVSYSTLL+ +VEN +F+EALS+F+EMNE + PLDLTTCN+MIDVYGQL
Sbjct: 246 KEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTCNVMIDVYGQL 305

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
           DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGE ELFGEAIHLFRLMQ+KDIEQNVVTY
Sbjct: 306 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTY 365

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           NTMIK+YGKSLEHEKATNL+QEMQNRGI PNA+TYSTIISIWGKAGKLDRAAMLFQKLRS
Sbjct: 366 NTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRS 425

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           SGVEIDQVLYQTMIVAYER+GL+ HAKRLLHELK PD+IPRETA+ IL  AGRIEE
Sbjct: 426 SGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELKHPDSIPRETAIKILARAGRIEE 481



 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 56/226 (24%), Positives = 115/226 (50%), Gaps = 2/226 (0%)
 Frame = -1

Query: 693 AEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDMAKE 514
           A  +P   +Y+ +L   +  +++  A  +F EM    +  D  T + +I  +G+  M   
Sbjct: 111 ARYSPSVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFDA 170

Query: 513 ADRLFW--SMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTM 340
           +  LFW   M +  +  ++V Y+ L+ +  +   + +AI +F  ++R  I  ++V YN+M
Sbjct: 171 S--LFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSM 228

Query: 339 IKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGV 160
           I ++GK+    +A  L++EM+  G+MP+ V+YST++S++ +  K   A  +F ++  +  
Sbjct: 229 INVFGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKC 288

Query: 159 EIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILV 22
            +D      MI  Y +  +   A RL   +++    P   + + L+
Sbjct: 289 PLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLL 334


>ref|XP_007032420.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao] gi|508711449|gb|EOY03346.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 672

 Score =  412 bits (1058), Expect = e-113
 Identities = 204/236 (86%), Positives = 220/236 (93%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EMR   V PDTVSYST+L  +VEN +F+EALS+F+EMNEV+ PLDLTTCNIMIDVYGQL
Sbjct: 281 KEMRDVGVMPDTVSYSTVLNMYVENHKFVEALSVFAEMNEVKCPLDLTTCNIMIDVYGQL 340

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
           DMAKEADRLFW MRKMGIEPNVVSYNTLL+VYGEAEL+GEAIHLFRLM RKDIEQNVVTY
Sbjct: 341 DMAKEADRLFWGMRKMGIEPNVVSYNTLLKVYGEAELYGEAIHLFRLMHRKDIEQNVVTY 400

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           NTMIKIYGKSLEHEKA NLVQEMQNRGI PNA+TYSTIISIWGKAGKLDRAAMLFQKLRS
Sbjct: 401 NTMIKIYGKSLEHEKAYNLVQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRS 460

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           SGVEIDQVLYQTMIVAYERAGL+ HAKRLLHELK+PDN+PR+TA+ IL  AGRIEE
Sbjct: 461 SGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKQPDNLPRDTAIMILARAGRIEE 516



 Score = 93.2 bits (230), Expect = 8e-17
 Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 35/247 (14%)
 Frame = -1

Query: 693 AEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDMAKE 514
           A  +P   +Y+ ++   V+ +++  A  +F EM E  +  D  T + +I  +G+  M   
Sbjct: 146 ARYSPSLFAYNVVIRNVVKAKQWAIAHGLFEEMREKGLTPDRFTYSTLITYFGKEGMFDS 205

Query: 513 ADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 334
           A      M   G+  ++V ++ L+ +  +   + +AI +F  ++R  I  ++V YN+MI 
Sbjct: 206 ALSWLQKMENDGVSGDLVLFSNLIELSRKLRDYSKAISIFNKLKRSGIVPDLVCYNSMIN 265

Query: 333 IYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTI--------------------------- 235
           ++GK+    +A  LV+EM++ G+MP+ V+YST+                           
Sbjct: 266 VFGKAKLFREARLLVKEMRDVGVMPDTVSYSTVLNMYVENHKFVEALSVFAEMNEVKCPL 325

Query: 234 --------ISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLIGHAKRLL 79
                   I ++G+      A  LF  +R  G+E + V Y T++  Y  A L G A  L 
Sbjct: 326 DLTTCNIMIDVYGQLDMAKEADRLFWGMRKMGIEPNVVSYNTLLKVYGEAELYGEAIHLF 385

Query: 78  HELKRPD 58
             + R D
Sbjct: 386 RLMHRKD 392



 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 48/175 (27%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
 Frame = -1

Query: 534 QLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVV 355
           + D  +    L W   +    P++ +YN ++R   +A+ +  A  LF  M+ K +  +  
Sbjct: 129 ETDWQRSLALLDWVNEEARYSPSLFAYNVVIRNVVKAKQWAIAHGLFEEMREKGLTPDRF 188

Query: 354 TYNTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKL 175
           TY+T+I  +GK    + A + +Q+M+N G+  + V +S +I +  K     +A  +F KL
Sbjct: 189 TYSTLITYFGKEGMFDSALSWLQKMENDGVSGDLVLFSNLIELSRKLRDYSKAISIFNKL 248

Query: 174 RSSGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELK----RPDNIPRETAVSILV 22
           + SG+  D V Y +MI  + +A L   A+ L+ E++     PD +   T +++ V
Sbjct: 249 KRSGIVPDLVCYNSMINVFGKAKLFREARLLVKEMRDVGVMPDTVSYSTVLNMYV 303



 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 38/194 (19%), Positives = 97/194 (50%), Gaps = 1/194 (0%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EM+   + P+ ++YST+++ + +  +   A  +F ++    V +D      MI  Y + 
Sbjct: 421 QEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERA 480

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
            +   A RL   ++    +P+ +  +T + +   A    EA  +FR        +++  +
Sbjct: 481 GLVAHAKRLLHELK----QPDNLPRDTAIMILARAGRIEEATWVFRQACDAGEVKDISVF 536

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
             MI ++ ++ +H     + ++M++ G  P++   + +++ +GK  + D+A  ++++++ 
Sbjct: 537 GLMIDLFSRNKKHANVIEVFEKMRSAGYFPDSNVIALVLNAYGKLREFDKADAVYKEMQE 596

Query: 168 SG-VEIDQVLYQTM 130
            G V  D+V +Q +
Sbjct: 597 EGCVFPDEVHFQML 610


>gb|ACU25777.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 426

 Score =  411 bits (1057), Expect = e-112
 Identities = 204/235 (86%), Positives = 218/235 (92%)
 Frame = -1

Query: 705 EMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLD 526
           EMR A V PDTVSYST+LT +VEN +FLEALS+F EM E+   LDLTTCNIMIDVYGQLD
Sbjct: 104 EMRVAGVMPDTVSYSTILTMYVENHKFLEALSVFREMREINCLLDLTTCNIMIDVYGQLD 163

Query: 525 MAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYN 346
           MAKEADRLFWSMRKMGIEPNVVSYNTLLRVYG+AELFGEAIHLFRLMQRK+IEQNVVTYN
Sbjct: 164 MAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYN 223

Query: 345 TMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSS 166
           TM+ IYGK+LEHEKA NL+QEMQNRGI PNA+TYSTIISIWGK GKLDRAAMLFQKLRSS
Sbjct: 224 TMMMIYGKTLEHEKANNLIQEMQNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSS 283

Query: 165 GVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           GVEIDQVLYQTMIVAYERAGL+ HAKRLLHELKRPDNIPR+TA+ IL GAGRIEE
Sbjct: 284 GVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEE 338



 Score =  122 bits (306), Expect = 1e-25
 Identities = 76/239 (31%), Positives = 127/239 (53%), Gaps = 4/239 (1%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           ++M    V  D V YS L+    +   + +A+SIFS +    +  DL   N MI+V+G+ 
Sbjct: 33  QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKA 92

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
            + KEA  L   MR  G+ P+ VSY+T+L +Y E   F EA+ +FR M+  +   ++ T 
Sbjct: 93  KLFKEARSLISEMRVAGVMPDTVSYSTILTMYVENHKFLEALSVFREMREINCLLDLTTC 152

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           N MI +YG+    ++A  L   M+  GI PN V+Y+T++ ++G A     A  LF+ ++ 
Sbjct: 153 NIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR 212

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELK----RPDNIPRETAVSILVGAGRIE 4
             +E + V Y TM++ Y +      A  L+ E++     P+ I   T +SI    G+++
Sbjct: 213 KNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNAITYSTIISIWGKVGKLD 271



 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 49/246 (19%), Positives = 98/246 (39%), Gaps = 66/246 (26%)
 Frame = -1

Query: 702 MRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDM 523
           MR   + P+ VSY+TLL  + +   F EA+ +F  M    +  ++ T N M+ +YG+   
Sbjct: 175 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLE 234

Query: 522 AKEADRLFWSMRKMGIEPNVVS-----------------------------------YNT 448
            ++A+ L   M+  GIEPN ++                                   Y T
Sbjct: 235 HEKANNLIQEMQNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQT 294

Query: 447 LLRVYGEAELFGEAIHLFRLMQRKD----------------IEQ---------------N 361
           ++  Y  A L   A  L   ++R D                IE+               +
Sbjct: 295 MIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKD 354

Query: 360 VVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQ 181
           +  +  MI ++ K  ++     + ++M+  G  P++   + +++ +GK  + D+A  ++ 
Sbjct: 355 ITVFERMIDLFSKYRKYTNVGEVFEKMRGLGYFPDSNVIALVLNAYGKLHEFDKANEVYM 414

Query: 180 KLRSSG 163
           +++  G
Sbjct: 415 EMQDEG 420


>ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citrus clementina]
           gi|557533112|gb|ESR44295.1| hypothetical protein
           CICLE_v10011224mg [Citrus clementina]
          Length = 677

 Score =  409 bits (1052), Expect = e-112
 Identities = 203/236 (86%), Positives = 220/236 (93%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           EEMR   V PDTVSYSTLL  +VEN +F+EALS+F+EMNEV  PLDLTTCNIMIDVYGQL
Sbjct: 283 EEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 342

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
           DMAK+ADRLFWSMRKMGI+P+VVSYNTLLRVYGEAELFGEAIHLFRLMQRK+IEQNVVTY
Sbjct: 343 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 402

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           NTMIKIYGKSLEHEKATNL+QEMQNRGI PNA+TYSTII+IWGKAGKLDRAAMLFQKLRS
Sbjct: 403 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 462

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           SGVEID VLYQTMIVAYER GL+ HAKRLLHEL++PD IPRETA++IL  AGRIEE
Sbjct: 463 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPDTIPRETAITILARAGRIEE 518



 Score =  115 bits (288), Expect = 1e-23
 Identities = 65/217 (29%), Positives = 120/217 (55%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EMR   +APD  +YSTL+T F +   F  A+S   +M + RV  DL   + +I++  +L
Sbjct: 178 DEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKL 237

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
               +A  +F  ++  GI P++V+YNT++ V+G+A+LF EA  L   M+ + ++ + V+Y
Sbjct: 238 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 297

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           +T++ +Y ++ +  +A ++  EM       +  T + +I ++G+      A  LF  +R 
Sbjct: 298 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 357

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPD 58
            G++   V Y T++  Y  A L G A  L   ++R +
Sbjct: 358 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 394



 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 50/210 (23%), Positives = 107/210 (50%)
 Frame = -1

Query: 693 AEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDMAKE 514
           A  +P   +Y+ +L   +  +++  A  +F EM +  +  D  T + +I  +G+  M   
Sbjct: 148 ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 207

Query: 513 ADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 334
           A      M +  +  ++V Y+ L+ +  +   + +AI +F  ++   I  ++V YNTMI 
Sbjct: 208 AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 267

Query: 333 IYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEI 154
           ++GK+   ++A  L++EM+ +G+ P+ V+YST+++++ +  K   A  +F ++      +
Sbjct: 268 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 327

Query: 153 DQVLYQTMIVAYERAGLIGHAKRLLHELKR 64
           D      MI  Y +  +   A RL   +++
Sbjct: 328 DLTTCNIMIDVYGQLDMAKDADRLFWSMRK 357



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 49/165 (29%), Positives = 87/165 (52%), Gaps = 4/165 (2%)
 Frame = -1

Query: 504 LFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 325
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY+T+I  +G
Sbjct: 141 LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 200

Query: 324 KSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQV 145
           K    + A + +Q+M+   +  + V YS +I +  K     +A  +F +L+SSG+  D V
Sbjct: 201 KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 260

Query: 144 LYQTMIVAYERAGLIGHAKRLLHELK----RPDNIPRETAVSILV 22
            Y TMI  + +A L   A+ L+ E++    +PD +   T +++ V
Sbjct: 261 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV 305


>gb|ACU25773.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 426

 Score =  409 bits (1052), Expect = e-112
 Identities = 202/235 (85%), Positives = 219/235 (93%)
 Frame = -1

Query: 705 EMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLD 526
           EMR A V PDTVSYSTLLT +VEN++FLEALS+F+EM E++  LDLTTCNIMIDVYGQLD
Sbjct: 104 EMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLD 163

Query: 525 MAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYN 346
           MAKEAD+LFWSMRK+GIEPNVVSYNTLLRVYG+AELFGEAIHLFRLMQRKDIEQNVVTYN
Sbjct: 164 MAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYN 223

Query: 345 TMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSS 166
           TM+ IYGK+LEHEKA NL+QEM NRGI PNA+TYSTIISIWGK GKLDRAAMLFQKLRSS
Sbjct: 224 TMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSS 283

Query: 165 GVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           GVEID VLYQTMIVAYERAGL+ HAKRLLHELKRPDNIPR+TA+ IL GAGRIEE
Sbjct: 284 GVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEE 338



 Score =  119 bits (299), Expect = 8e-25
 Identities = 75/239 (31%), Positives = 126/239 (52%), Gaps = 4/239 (1%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           ++M    V  D V YS L+    +   + +A+SIFS +    +  DL   N MI+V+G+ 
Sbjct: 33  QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGIKPDLVAYNSMINVFGKA 92

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
            + +EA  L   MR+ G+ P+ VSY+TLL +Y E + F EA+ +F  M+      ++ T 
Sbjct: 93  KLFREARSLISEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLDLTTC 152

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           N MI +YG+    ++A  L   M+  GI PN V+Y+T++ ++G A     A  LF+ ++ 
Sbjct: 153 NIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR 212

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELK----RPDNIPRETAVSILVGAGRIE 4
             +E + V Y TM++ Y +      A  L+ E+      P+ I   T +SI    G+++
Sbjct: 213 KDIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLD 271



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 49/246 (19%), Positives = 95/246 (38%), Gaps = 66/246 (26%)
 Frame = -1

Query: 702 MRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDM 523
           MR   + P+ VSY+TLL  + +   F EA+ +F  M    +  ++ T N M+ +YG+   
Sbjct: 175 MRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLE 234

Query: 522 AKEADRLFWSMRKMGIEPNVVS-----------------------------------YNT 448
            ++A+ L   M   GIEPN ++                                   Y T
Sbjct: 235 HEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQT 294

Query: 447 LLRVYGEAELFGEAIHLFRLMQRKD----------------IEQ---------------N 361
           ++  Y  A L   A  L   ++R D                IE+               +
Sbjct: 295 MIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKD 354

Query: 360 VVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQ 181
           +  +  MI ++ K  ++     + ++M+  G   ++   S +++ +GK  + D+A  ++ 
Sbjct: 355 ITVFERMIDLFSKYKKYPNVVEVFEKMRGLGYFSDSNVISLVLNAYGKLHEFDKANDMYM 414

Query: 180 KLRSSG 163
            ++  G
Sbjct: 415 GMQDEG 420


>ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Cucumis sativus]
           gi|449530101|ref|XP_004172035.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Cucumis sativus]
          Length = 680

 Score =  409 bits (1050), Expect = e-112
 Identities = 202/236 (85%), Positives = 219/236 (92%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EMRA +V PDTVSYSTLL  FVEN +FLEALS+ SEM EV  PLDLTTCNIMIDVYGQL
Sbjct: 288 KEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQL 347

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
           DM KEADRLFW MRK+GIEPNVVSYNT+LRVYGEAELFGEAIHLFRLMQRK+I+QNVVTY
Sbjct: 348 DMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTY 407

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           NTMIKIYGK+LEHEKATNLVQ+MQ RGI PNA+TYSTIISIWGKAGKLDR+AMLFQKLRS
Sbjct: 408 NTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRS 467

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           SG EIDQVLYQTMIVAYE+AGL+GHAKRLLHELK+PDNIPR TA++IL  AGRIEE
Sbjct: 468 SGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPDNIPRTTAITILAKAGRIEE 523



 Score =  117 bits (292), Expect = 5e-24
 Identities = 66/217 (30%), Positives = 125/217 (57%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EMR   +A D  +YSTL+T F +   F  ALS   +M + RV  DL   + +I++  +L
Sbjct: 183 DEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKL 242

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
               +A  +F  +++ GI P++V+YNT++ V+G+A+LF EA  L + M+  D+  + V+Y
Sbjct: 243 CDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSY 302

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           +T++ ++ ++ +  +A +++ EM+      +  T + +I ++G+   +  A  LF ++R 
Sbjct: 303 STLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRK 362

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPD 58
            G+E + V Y T++  Y  A L G A  L   ++R +
Sbjct: 363 IGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKE 399



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 49/206 (23%), Positives = 105/206 (50%)
 Frame = -1

Query: 681 PDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDMAKEADRL 502
           P   +Y+ +L   +  +++  A  +F EM +  +  D  T + +I  +G+  M   A   
Sbjct: 157 PSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSW 216

Query: 501 FWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 322
              M +  +  ++V Y+ L+ +  +   + +AI +F  ++R  I  ++V YNTMI ++GK
Sbjct: 217 LQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGK 276

Query: 321 SLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVL 142
           +    +A  L++EM+   +MP+ V+YST+++++ +  K   A  +  +++     +D   
Sbjct: 277 AKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTT 336

Query: 141 YQTMIVAYERAGLIGHAKRLLHELKR 64
              MI  Y +  ++  A RL   +++
Sbjct: 337 CNIMIDVYGQLDMVKEADRLFWRMRK 362



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 63/284 (22%), Positives = 117/284 (41%), Gaps = 66/284 (23%)
 Frame = -1

Query: 702  MRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDM 523
            MR   + P+ VSY+T+L  + E   F EA+ +F  M    +  ++ T N MI +YG+   
Sbjct: 360  MRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLE 419

Query: 522  AKEADRLFWSMRKMGIEPNVVSYNTLLRV------------------------------- 436
             ++A  L   M+K GIEPN ++Y+T++ +                               
Sbjct: 420  HEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQT 479

Query: 435  ----YGEAELFGEAIHLFRLMQRKD----------------IEQ---------------N 361
                Y +A L G A  L   +++ D                IE+               +
Sbjct: 480  MIVAYEKAGLVGHAKRLLHELKQPDNIPRTTAITILAKAGRIEEATWVFRQAFDAGELKD 539

Query: 360  VVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQ 181
            +  +  MI ++ ++ +H+    + ++M+N G  PN+   + +++ +GK    D A  L+ 
Sbjct: 540  ISVFECMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALVLNAYGKLRDFDTADALYM 599

Query: 180  KLRSSGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIP 49
            +++  G      ++  M+  Y   G     KRL    +R D+ P
Sbjct: 600  EMQEEGCVFTDEVHFQMLSLY---GARNDYKRLESLFERLDSDP 640



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 48/161 (29%), Positives = 84/161 (52%)
 Frame = -1

Query: 504 LFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 325
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ +  +  TY+T+I  +G
Sbjct: 146 LDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFG 205

Query: 324 KSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQV 145
           K    + A + +Q+M+   +  + V YS +I +  K     +A  +F +L+ SG+  D V
Sbjct: 206 KEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIV 265

Query: 144 LYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILV 22
            Y TMI  + +A L   A+ LL E++  D +P   + S L+
Sbjct: 266 AYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLL 306


>gb|ACU25774.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 426

 Score =  408 bits (1049), Expect = e-112
 Identities = 201/235 (85%), Positives = 219/235 (93%)
 Frame = -1

Query: 705 EMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLD 526
           EMR A V PDTVSYSTLLT +VEN++FLEALS+F+EM E++  +DLTTCNIMIDVYGQLD
Sbjct: 104 EMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLD 163

Query: 525 MAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYN 346
           MAKEAD+LFWSMRK+GIEPNVVSYNTLLRVYG+AELFGEAIHLFRLMQRKDIEQNVVTYN
Sbjct: 164 MAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYN 223

Query: 345 TMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSS 166
           TM+ IYGK+LEHEKA NL+QEM NRGI PNA+TYSTIISIWGK GKLDRAAMLFQKLRSS
Sbjct: 224 TMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSS 283

Query: 165 GVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           GVEID VLYQTMIVAYERAGL+ HAKRLLHELKRPDNIPR+TA+ IL GAGRIEE
Sbjct: 284 GVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEE 338



 Score =  119 bits (299), Expect = 8e-25
 Identities = 75/239 (31%), Positives = 126/239 (52%), Gaps = 4/239 (1%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           ++M    V  D V YS L+    +   + +A+SIFS +    +  DL   N MI+V+G+ 
Sbjct: 33  QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGITPDLVAYNSMINVFGKA 92

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
            + +EA  L   MR+ G+ P+ VSY+TLL +Y E + F EA+ +F  M+      ++ T 
Sbjct: 93  KLFREARSLISEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLVDLTTC 152

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           N MI +YG+    ++A  L   M+  GI PN V+Y+T++ ++G A     A  LF+ ++ 
Sbjct: 153 NIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR 212

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELK----RPDNIPRETAVSILVGAGRIE 4
             +E + V Y TM++ Y +      A  L+ E+      P+ I   T +SI    G+++
Sbjct: 213 KDIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLD 271



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 35/182 (19%), Positives = 84/182 (46%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EM    + P+ ++YST+++ + +  +   A  +F ++    V +D      MI  Y + 
Sbjct: 243 QEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERA 302

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
            +   A RL   +++    P+ +  +T + +   A    EA  +FR        +++  +
Sbjct: 303 GLVAHAKRLLHELKR----PDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVF 358

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
             MI ++ K  ++     + ++M+  G  P++   S +++ +GK  + D A  ++  ++ 
Sbjct: 359 ERMIDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVISLVLNAYGKLHEFDXANDMYMDMQD 418

Query: 168 SG 163
            G
Sbjct: 419 EG 420


>ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 672

 Score =  408 bits (1048), Expect = e-111
 Identities = 200/236 (84%), Positives = 220/236 (93%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EMRA  VAPDTVSYSTLLT +VEN +FLEAL +F EM+EV+  LD+TTCN+MIDVYGQL
Sbjct: 281 KEMRAVGVAPDTVSYSTLLTMYVENEKFLEALGVFREMSEVKCGLDITTCNVMIDVYGQL 340

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
           DMAKEADRLFWSMRKM IEPNVVSYNTLLRVYG+AELFGEAIHLFR+MQR D+EQNVVTY
Sbjct: 341 DMAKEADRLFWSMRKMVIEPNVVSYNTLLRVYGDAELFGEAIHLFRMMQRMDVEQNVVTY 400

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           NTMI+IYGKSLEHEKATNLVQEMQ RGI PNA+TYSTIISIWG+AGKLDRAAMLFQKLR+
Sbjct: 401 NTMIRIYGKSLEHEKATNLVQEMQKRGIQPNAITYSTIISIWGRAGKLDRAAMLFQKLRN 460

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           SGVEIDQVLYQTMIV+YER GL+ HAKRLLHELKRPDNIPRETA++IL  AGR+EE
Sbjct: 461 SGVEIDQVLYQTMIVSYERVGLVAHAKRLLHELKRPDNIPRETAITILARAGRVEE 516



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 41/140 (29%), Positives = 81/140 (57%)
 Frame = -1

Query: 537 GQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNV 358
           GQ D+A     LF  MR   + P+  +Y+TL+  +G+A +F  A+   + M++  +  ++
Sbjct: 166 GQWDLAHG---LFDEMRHRALAPDRYTYSTLITAFGKAGMFDAALSWLQKMEQDRVSGDL 222

Query: 357 VTYNTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQK 178
           V Y+ +I++  K  ++ KA  +   ++  GI+P+ V ++++I+++GKA     A  L ++
Sbjct: 223 VLYSNLIELSRKLCDYTKAIAIFSRLKRMGIVPDLVAFNSMINVFGKAKLFREARGLLKE 282

Query: 177 LRSSGVEIDQVLYQTMIVAY 118
           +R+ GV  D V Y T++  Y
Sbjct: 283 MRAVGVAPDTVSYSTLLTMY 302



 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 48/206 (23%), Positives = 103/206 (50%)
 Frame = -1

Query: 681 PDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDMAKEADRL 502
           P   +Y+ +L   +   ++  A  +F EM    +  D  T + +I  +G+  M   A   
Sbjct: 150 PSVFAYNVVLRNVLRAGQWDLAHGLFDEMRHRALAPDRYTYSTLITAFGKAGMFDAALSW 209

Query: 501 FWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 322
              M +  +  ++V Y+ L+ +  +   + +AI +F  ++R  I  ++V +N+MI ++GK
Sbjct: 210 LQKMEQDRVSGDLVLYSNLIELSRKLCDYTKAIAIFSRLKRMGIVPDLVAFNSMINVFGK 269

Query: 321 SLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVL 142
           +    +A  L++EM+  G+ P+ V+YST+++++ +  K   A  +F+++      +D   
Sbjct: 270 AKLFREARGLLKEMRAVGVAPDTVSYSTLLTMYVENEKFLEALGVFREMSEVKCGLDITT 329

Query: 141 YQTMIVAYERAGLIGHAKRLLHELKR 64
              MI  Y +  +   A RL   +++
Sbjct: 330 CNVMIDVYGQLDMAKEADRLFWSMRK 355



 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 43/154 (27%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
 Frame = -1

Query: 471 PNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNL 292
           P+V +YN +LR    A  +  A  LF  M+ + +  +  TY+T+I  +GK+   + A + 
Sbjct: 150 PSVFAYNVVLRNVLRAGQWDLAHGLFDEMRHRALAPDRYTYSTLITAFGKAGMFDAALSW 209

Query: 291 VQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYER 112
           +Q+M+   +  + V YS +I +  K     +A  +F +L+  G+  D V + +MI  + +
Sbjct: 210 LQKMEQDRVSGDLVLYSNLIELSRKLCDYTKAIAIFSRLKRMGIVPDLVAFNSMINVFGK 269

Query: 111 AGLIGHAKRLLHELK----RPDNIPRETAVSILV 22
           A L   A+ LL E++     PD +   T +++ V
Sbjct: 270 AKLFREARGLLKEMRAVGVAPDTVSYSTLLTMYV 303


>ref|XP_006482520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Citrus sinensis]
          Length = 677

 Score =  407 bits (1047), Expect = e-111
 Identities = 202/236 (85%), Positives = 220/236 (93%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           EEMR   V PDTVSYSTLL  +VEN +F+EALS+F+EMNEV  PLDLTTCNIMIDVYGQL
Sbjct: 283 EEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 342

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
           DMAK+ADRLFWSMRKMGI+P+VVSYNTLLRVYGEAELFGEAIHLFRLMQRK+IEQNVVTY
Sbjct: 343 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 402

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           NTMIKIYGKSLEHEKATNL+QEMQNRGI PNA+TYSTII+IWGKAGKLDRAAMLFQKLRS
Sbjct: 403 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 462

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           SGVEID VLYQTMIVAYER GL+ HAKRLLHEL++P+ IPRETA++IL  AGRIEE
Sbjct: 463 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEE 518



 Score =  115 bits (288), Expect = 1e-23
 Identities = 65/217 (29%), Positives = 120/217 (55%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EMR   +APD  +YSTL+T F +   F  A+S   +M + RV  DL   + +I++  +L
Sbjct: 178 DEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKL 237

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
               +A  +F  ++  GI P++V+YNT++ V+G+A+LF EA  L   M+ + ++ + V+Y
Sbjct: 238 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 297

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           +T++ +Y ++ +  +A ++  EM       +  T + +I ++G+      A  LF  +R 
Sbjct: 298 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 357

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPD 58
            G++   V Y T++  Y  A L G A  L   ++R +
Sbjct: 358 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 394



 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 50/210 (23%), Positives = 107/210 (50%)
 Frame = -1

Query: 693 AEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDMAKE 514
           A  +P   +Y+ +L   +  +++  A  +F EM +  +  D  T + +I  +G+  M   
Sbjct: 148 ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 207

Query: 513 ADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 334
           A      M +  +  ++V Y+ L+ +  +   + +AI +F  ++   I  ++V YNTMI 
Sbjct: 208 AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 267

Query: 333 IYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEI 154
           ++GK+   ++A  L++EM+ +G+ P+ V+YST+++++ +  K   A  +F ++      +
Sbjct: 268 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 327

Query: 153 DQVLYQTMIVAYERAGLIGHAKRLLHELKR 64
           D      MI  Y +  +   A RL   +++
Sbjct: 328 DLTTCNIMIDVYGQLDMAKDADRLFWSMRK 357



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 49/165 (29%), Positives = 87/165 (52%), Gaps = 4/165 (2%)
 Frame = -1

Query: 504 LFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 325
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY+T+I  +G
Sbjct: 141 LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 200

Query: 324 KSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQV 145
           K    + A + +Q+M+   +  + V YS +I +  K     +A  +F +L+SSG+  D V
Sbjct: 201 KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 260

Query: 144 LYQTMIVAYERAGLIGHAKRLLHELK----RPDNIPRETAVSILV 22
            Y TMI  + +A L   A+ L+ E++    +PD +   T +++ V
Sbjct: 261 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV 305



 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 47/231 (20%), Positives = 107/231 (46%), Gaps = 1/231 (0%)
 Frame = -1

Query: 708  EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
            +EM+   + P+ ++YST++  + +  +   A  +F ++    V +D      MI  Y ++
Sbjct: 423  QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 482

Query: 528  DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
             +   A RL   +R    +PN +   T + +   A    EA  +FR        +++  +
Sbjct: 483  GLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 538

Query: 348  NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
              MI+++ ++ ++     + ++M++ G  P++   + +++ +GK  + + A  L+ +++ 
Sbjct: 539  GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 598

Query: 168  SG-VEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVG 19
             G V  DQV +Q M+  Y         + L   L    NI ++    ++ G
Sbjct: 599  EGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAG 648


>gb|ACU25775.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 426

 Score =  405 bits (1042), Expect = e-111
 Identities = 200/235 (85%), Positives = 218/235 (92%)
 Frame = -1

Query: 705 EMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLD 526
           EMR   V PDTVSYSTLLT +VEN++FLEALS+F+EM E++  LDLTTCNIMIDVYGQLD
Sbjct: 104 EMRMVGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLD 163

Query: 525 MAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYN 346
           MAKEAD+LFWSMRKMGIEPNVVSYNTLLRVYG+AELFGEAIHLFRLMQRK+IEQNVVTYN
Sbjct: 164 MAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYN 223

Query: 345 TMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSS 166
           TM+ IYGK+LEHEKA NL+QEM +RGI PNA+TYSTIISIWGK GKLDRAAMLFQKLRSS
Sbjct: 224 TMMMIYGKTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSS 283

Query: 165 GVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           GVEID VLYQTMIVAYERAGL+ HAKRLLHELKRPDNIPR+TA+ IL GAGRIEE
Sbjct: 284 GVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEE 338



 Score =  120 bits (300), Expect = 6e-25
 Identities = 75/239 (31%), Positives = 126/239 (52%), Gaps = 4/239 (1%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           ++M    V  D V YS L+    +   + +A+SIFS +    +  DL   N MI+V+G+ 
Sbjct: 33  QKMEQDRVPGDLVLYSNLIELSRKLYDYSKAISIFSRLKRSGIVPDLVAYNSMINVFGKA 92

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
            + +EA  L   MR +G+ P+ VSY+TLL +Y E + F EA+ +F  M+      ++ T 
Sbjct: 93  KLFREARSLISEMRMVGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLDLTTC 152

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           N MI +YG+    ++A  L   M+  GI PN V+Y+T++ ++G A     A  LF+ ++ 
Sbjct: 153 NIMIDVYGQLDMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR 212

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELK----RPDNIPRETAVSILVGAGRIE 4
             +E + V Y TM++ Y +      A  L+ E+      P+ I   T +SI    G+++
Sbjct: 213 KNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLD 271



 Score =  107 bits (266), Expect = 5e-21
 Identities = 63/212 (29%), Positives = 119/212 (56%)
 Frame = -1

Query: 699 RAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDMA 520
           R   ++P   +YSTL+T F +   F +ALS   +M + RVP DL   + +I++  +L   
Sbjct: 1   RERGLSPXRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDY 60

Query: 519 KEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTM 340
            +A  +F  +++ GI P++V+YN+++ V+G+A+LF EA  L   M+   +  + V+Y+T+
Sbjct: 61  SKAISIFSRLKRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTL 120

Query: 339 IKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGV 160
           + +Y ++ +  +A ++  EM+    + +  T + +I ++G+      A  LF  +R  G+
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGI 180

Query: 159 EIDQVLYQTMIVAYERAGLIGHAKRLLHELKR 64
           E + V Y T++  Y  A L G A  L   ++R
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR 212



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 48/246 (19%), Positives = 97/246 (39%), Gaps = 66/246 (26%)
 Frame = -1

Query: 702 MRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDM 523
           MR   + P+ VSY+TLL  + +   F EA+ +F  M    +  ++ T N M+ +YG+   
Sbjct: 175 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLE 234

Query: 522 AKEADRLFWSMRKMGIEPNVVS-----------------------------------YNT 448
            ++A+ L   M   GIEPN ++                                   Y T
Sbjct: 235 HEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQT 294

Query: 447 LLRVYGEAELFGEAIHLFRLMQRKD----------------IEQ---------------N 361
           ++  Y  A L   A  L   ++R D                IE+               +
Sbjct: 295 MIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKD 354

Query: 360 VVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQ 181
           +  +  M+ ++ K  ++     + ++M+  G  P++   + +++ +GK  + D+A  ++ 
Sbjct: 355 ITVFERMVDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYL 414

Query: 180 KLRSSG 163
           +++  G
Sbjct: 415 EMQDEG 420


>ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Capsella rubella]
           gi|482554761|gb|EOA18954.1| hypothetical protein
           CARUB_v10007588mg [Capsella rubella]
          Length = 679

 Score =  404 bits (1038), Expect = e-110
 Identities = 201/236 (85%), Positives = 219/236 (92%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EM  A V P+TVSYSTLL+ +VEN++FLEALS+F+EM EV  PLDLTTCNIMIDVYGQL
Sbjct: 286 KEMTEAGVLPNTVSYSTLLSVYVENQKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQL 345

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
           DM KEADRLFWS+RKM IEPNVVSYNT+LRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY
Sbjct: 346 DMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 405

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           NTMIKIYGK++EHEKATNLV+EMQ+RGI PNA+TYSTIISIWGKAGKLDRAA LFQKLRS
Sbjct: 406 NTMIKIYGKTMEHEKATNLVREMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRS 465

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           SGVEIDQVLYQTMIVAYER GL+GHAKRLLHELK PDNIPRETA++IL  AGR EE
Sbjct: 466 SGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEE 521



 Score =  120 bits (300), Expect = 6e-25
 Identities = 70/217 (32%), Positives = 122/217 (56%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EMR   +APD  +YSTL+T+F +   F  ALS   +M + RV  DL   + +I++  +L
Sbjct: 181 DEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRL 240

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
               +A  +F  ++K GI P++V+YN+++ VYG+A+LF EA  L + M    +  N V+Y
Sbjct: 241 CDYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFREARLLIKEMTEAGVLPNTVSY 300

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           +T++ +Y ++ +  +A ++  EM+      +  T + +I ++G+   +  A  LF  LR 
Sbjct: 301 STLLSVYVENQKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRK 360

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPD 58
             +E + V Y T++  Y  A L G A  L   ++R D
Sbjct: 361 MDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKD 397



 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 56/224 (25%), Positives = 113/224 (50%)
 Frame = -1

Query: 693 AEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDMAKE 514
           A+  P   +Y+ +L   +  ++F  A  +F EM +  +  D  T + +I  +G+  M   
Sbjct: 151 AKYTPSVYAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDS 210

Query: 513 ADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 334
           A      M +  +  ++V Y+ L+ +      + +AI +F  +++  I  ++V YN+MI 
Sbjct: 211 ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKKSGITPDLVAYNSMIN 270

Query: 333 IYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEI 154
           +YGK+    +A  L++EM   G++PN V+YST++S++ +  K   A  +F +++     +
Sbjct: 271 VYGKAKLFREARLLIKEMTEAGVLPNTVSYSTLLSVYVENQKFLEALSVFAEMKEVNCPL 330

Query: 153 DQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILV 22
           D      MI  Y +  ++  A RL   L++ D  P   + + ++
Sbjct: 331 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTIL 374



 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 47/169 (27%), Positives = 84/169 (49%)
 Frame = -1

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
           D  +    L W   +    P+V +YN +LR    A+ F  A  LF  M+++ +  +  TY
Sbjct: 136 DWQRSLALLDWVHEEAKYTPSVYAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTY 195

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           +T+I  +GK    + A + +Q+M+   +  + V YS +I +  +     +A  +F +L+ 
Sbjct: 196 STLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKK 255

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILV 22
           SG+  D V Y +MI  Y +A L   A+ L+ E+     +P   + S L+
Sbjct: 256 SGITPDLVAYNSMINVYGKAKLFREARLLIKEMTEAGVLPNTVSYSTLL 304



 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 49/245 (20%), Positives = 103/245 (42%), Gaps = 32/245 (13%)
 Frame = -1

Query: 705  EMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLD 526
            EM++  + P+ ++YST+++ + +  +   A ++F ++    V +D      MI  Y ++ 
Sbjct: 427  EMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVG 486

Query: 525  MAKEADRLF----------------------------WSMRKM---GIEPNVVSYNTLLR 439
            +   A RL                             W  R+    G   ++  +  ++ 
Sbjct: 487  LMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMIN 546

Query: 438  VYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRG-IM 262
            +Y   + +   I +F  M+      +      ++  YGK  E EKA  + +EMQ  G + 
Sbjct: 547  LYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEKADTVYREMQEEGCVF 606

Query: 261  PNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLIGHAKRL 82
            P+ V +  ++S++      +    LFQ+L S      + L+  +   YERA  +  A R+
Sbjct: 607  PDEVHFQ-MLSLYSSKKDFEMVETLFQRLESEPNVNSKELHLVVAALYERADKLNDASRV 665

Query: 81   LHELK 67
            ++ ++
Sbjct: 666  MNRMR 670


>ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297316573|gb|EFH46996.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 680

 Score =  404 bits (1038), Expect = e-110
 Identities = 201/236 (85%), Positives = 218/236 (92%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EM  A V+P+TVSYSTLL+ +VEN +FLEALS+F+EM EV  PLDLTTCNIMIDVYGQL
Sbjct: 286 KEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQL 345

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
           DM KEADRLFWS+RKM IEPNVVSYNT+LRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY
Sbjct: 346 DMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 405

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           NTMIKIYGK++EHEKATNLVQEMQ+RGI PNA+TYSTIISIWGKAGKLDRAA LFQKLRS
Sbjct: 406 NTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRS 465

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           SGVEIDQVLYQTMIVAYER GL+GHAKRLLHELK PDNIPRETA++IL  AG  EE
Sbjct: 466 SGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGSTEE 521



 Score =  120 bits (300), Expect = 6e-25
 Identities = 69/217 (31%), Positives = 122/217 (56%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EMR   +APD  +YSTL+T+F +   F  ALS   +M + RV  DL   + +I++  +L
Sbjct: 181 DEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRL 240

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
               +A  +F  +++ GI P++V+YN+++ VYG+A+LF EA  L + M    +  N V+Y
Sbjct: 241 CDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSY 300

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           +T++ +Y ++ +  +A ++  EM+      +  T + +I ++G+   +  A  LF  LR 
Sbjct: 301 STLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRK 360

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPD 58
             +E + V Y T++  Y  A L G A  L   ++R D
Sbjct: 361 MDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKD 397



 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 57/224 (25%), Positives = 113/224 (50%)
 Frame = -1

Query: 693 AEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDMAKE 514
           A+  P   +Y+ +L   +  ++F  A  +F EM +  +  D  T + +I  +G+  M   
Sbjct: 151 AKYTPSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDS 210

Query: 513 ADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 334
           A      M +  +  ++V Y+ L+ +      + +AI +F  ++R  I  ++V YN+MI 
Sbjct: 211 ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMIN 270

Query: 333 IYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEI 154
           +YGK+   ++A  L++EM   G+ PN V+YST++S++ +  K   A  +F +++     +
Sbjct: 271 VYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPL 330

Query: 153 DQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILV 22
           D      MI  Y +  ++  A RL   L++ D  P   + + ++
Sbjct: 331 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTIL 374



 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
 Frame = -1

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
           D  +    L W   +    P+V +YN +LR    A+ FG A  LF  M+++ +  +  TY
Sbjct: 136 DWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTY 195

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           +T+I  +GK    + A + +Q+M+   +  + V YS +I +  +     +A  +F +L+ 
Sbjct: 196 STLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKR 255

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKR----PDNIPRETAVSILV 22
           SG+  D V Y +MI  Y +A L   A+ L+ E+      P+ +   T +S+ V
Sbjct: 256 SGITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYV 308



 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 48/246 (19%), Positives = 104/246 (42%), Gaps = 32/246 (13%)
 Frame = -1

Query: 708  EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
            +EM++  + P+ ++YST+++ + +  +   A ++F ++    V +D      MI  Y ++
Sbjct: 426  QEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERV 485

Query: 528  DMAKEADRLF----------------------------WSMRKM---GIEPNVVSYNTLL 442
             +   A RL                             W  R+    G   ++  +  ++
Sbjct: 486  GLMGHAKRLLHELKLPDNIPRETAITILAKAGSTEEATWVFRQAFESGEVKDISVFGCMI 545

Query: 441  RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRG-I 265
             +Y   + +   I +F  M+      +      ++  YGK  E EKA  + +EMQ  G +
Sbjct: 546  NLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEKADTVYREMQEEGCV 605

Query: 264  MPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLIGHAKR 85
             P+ V +  ++S++      +    LF++L S      + L+  +   YERA  +  A R
Sbjct: 606  FPDEVHFQ-MLSLYSSKKDFEMVESLFERLESDPNVNSKELHLVVAALYERADKLNDASR 664

Query: 84   LLHELK 67
            +++ ++
Sbjct: 665  VMNRMR 670


>ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543458|gb|EEF44989.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score =  403 bits (1035), Expect = e-110
 Identities = 202/235 (85%), Positives = 215/235 (91%)
 Frame = -1

Query: 705 EMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLD 526
           EMR   V PDTVSYSTLL+ +VEN +F+EALS+F+EMNE    LDL TCNIMIDVYGQLD
Sbjct: 264 EMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLD 323

Query: 525 MAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYN 346
           M KEADRLFWSMRKMGIEPNVVSYNTLL+VYGEAELFGEAIHLFRLMQRK+IEQNVVTYN
Sbjct: 324 MVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 383

Query: 345 TMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSS 166
           TMIKIYGKSLEHEKATNLVQEMQ RGI PNA+TYSTIISIWGKAGKLDRAAMLFQKLRSS
Sbjct: 384 TMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSS 443

Query: 165 GVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           GVEIDQVLYQTMIVAYERAGL+ HAKRLLH+LK PD IPR+TA+ IL  AGRIEE
Sbjct: 444 GVEIDQVLYQTMIVAYERAGLVAHAKRLLHDLKCPDIIPRDTAIKILARAGRIEE 498



 Score = 96.3 bits (238), Expect = 9e-18
 Identities = 57/226 (25%), Positives = 118/226 (52%), Gaps = 2/226 (0%)
 Frame = -1

Query: 693 AEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDMAKE 514
           A  +P   +Y+ +L   +  +++  A  +F EM +  +  D  T + +I  +G+  M  E
Sbjct: 128 ARYSPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKAGMFDE 187

Query: 513 ADRLFW--SMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTM 340
           +  LFW   M +  +  ++V Y+ L+ +  +   + +AI +F  ++R  I  ++V YN+M
Sbjct: 188 S--LFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSM 245

Query: 339 IKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGV 160
           I ++GK+    +A  LV EM+  G++P+ V+YST++S++ +  K   A  +F ++  +  
Sbjct: 246 INVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANC 305

Query: 159 EIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILV 22
            +D +    MI  Y +  ++  A RL   +++    P   + + L+
Sbjct: 306 SLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLL 351



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 57/223 (25%), Positives = 108/223 (48%), Gaps = 5/223 (2%)
 Frame = -1

Query: 675 TVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQ-LDMAKEADRLF 499
           +V    LL +  + +  +E  S+ S   E ++ +       M+ +  Q  D  +    L 
Sbjct: 68  SVDMKQLLISISQTQNEVELYSLLSPYKERQLSI-----RFMVSLISQEADWQRSLALLD 122

Query: 498 WSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKS 319
           W        P+V +YN +LR    A+ +  A  LF  M+++ +  +  TY+T+I  +GK+
Sbjct: 123 WINEVARYSPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKA 182

Query: 318 LEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLY 139
              +++   +Q+M+   +  + V YS +I +  K     +A  +F +L+ SG+  D V Y
Sbjct: 183 GMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAY 242

Query: 138 QTMIVAYERAGLIGHAKRLLHELKR----PDNIPRETAVSILV 22
            +MI  + +A L   A+ L+HE++     PD +   T +S+ V
Sbjct: 243 NSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYV 285


>ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g39980, chloroplastic; Flags: Precursor
           gi|10176990|dbj|BAB10222.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007115|gb|AED94498.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 678

 Score =  402 bits (1034), Expect = e-110
 Identities = 201/236 (85%), Positives = 217/236 (91%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EM  A V P+TVSYSTLL+ +VEN +FLEALS+F+EM EV   LDLTTCNIMIDVYGQL
Sbjct: 284 KEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQL 343

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
           DM KEADRLFWS+RKM IEPNVVSYNT+LRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY
Sbjct: 344 DMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 403

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           NTMIKIYGK++EHEKATNLVQEMQ+RGI PNA+TYSTIISIWGKAGKLDRAA LFQKLRS
Sbjct: 404 NTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRS 463

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           SGVEIDQVLYQTMIVAYER GL+GHAKRLLHELK PDNIPRETA++IL  AGR EE
Sbjct: 464 SGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEE 519



 Score =  119 bits (298), Expect = 1e-24
 Identities = 69/217 (31%), Positives = 122/217 (56%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           +EMR   +APD  +YSTL+T+F +   F  ALS   +M + RV  DL   + +I++  +L
Sbjct: 179 DEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRL 238

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
               +A  +F  +++ GI P++V+YN+++ VYG+A+LF EA  L + M    +  N V+Y
Sbjct: 239 CDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSY 298

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           +T++ +Y ++ +  +A ++  EM+      +  T + +I ++G+   +  A  LF  LR 
Sbjct: 299 STLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRK 358

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPD 58
             +E + V Y T++  Y  A L G A  L   ++R D
Sbjct: 359 MDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKD 395



 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 57/224 (25%), Positives = 113/224 (50%)
 Frame = -1

Query: 693 AEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDMAKE 514
           A+  P   +Y+ +L   +  ++F  A  +F EM +  +  D  T + +I  +G+  M   
Sbjct: 149 AKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDS 208

Query: 513 ADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 334
           A      M +  +  ++V Y+ L+ +      + +AI +F  ++R  I  ++V YN+MI 
Sbjct: 209 ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMIN 268

Query: 333 IYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEI 154
           +YGK+    +A  L++EM   G++PN V+YST++S++ +  K   A  +F +++     +
Sbjct: 269 VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL 328

Query: 153 DQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILV 22
           D      MI  Y +  ++  A RL   L++ D  P   + + ++
Sbjct: 329 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTIL 372



 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 47/169 (27%), Positives = 84/169 (49%)
 Frame = -1

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
           D  +    L W   +    P+V +YN +LR    A+ F  A  LF  M+++ +  +  TY
Sbjct: 134 DWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTY 193

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           +T+I  +GK    + A + +Q+M+   +  + V YS +I +  +     +A  +F +L+ 
Sbjct: 194 STLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKR 253

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILV 22
           SG+  D V Y +MI  Y +A L   A+ L+ E+     +P   + S L+
Sbjct: 254 SGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 49/246 (19%), Positives = 104/246 (42%), Gaps = 32/246 (13%)
 Frame = -1

Query: 708  EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
            +EM++  + P+ ++YST+++ + +  +   A ++F ++    V +D      MI  Y ++
Sbjct: 424  QEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERV 483

Query: 528  DMAKEADRLF----------------------------WSMRKM---GIEPNVVSYNTLL 442
             +   A RL                             W  R+    G   ++  +  ++
Sbjct: 484  GLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMI 543

Query: 441  RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRG-I 265
             +Y   + +   I +F  M+      +      ++  YGK  E EKA  + +EMQ  G +
Sbjct: 544  NLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCV 603

Query: 264  MPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLIGHAKR 85
             P+ V +  ++S++      +    LFQ+L S      + L+  +   YERA  +  A R
Sbjct: 604  FPDEVHFQ-MLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASR 662

Query: 84   LLHELK 67
            +++ ++
Sbjct: 663  VMNRMR 668


>gb|ACU25771.1| pentatricopeptide repeat-containing protein [Citharexylum
           ligustrinum]
          Length = 426

 Score =  402 bits (1034), Expect = e-110
 Identities = 198/235 (84%), Positives = 217/235 (92%)
 Frame = -1

Query: 705 EMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLD 526
           EM+ A V PDTVSYSTLLT +VEN++FLEALS+F+EM E++  LDLTTCNIMIDVYGQLD
Sbjct: 104 EMKTAGVXPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCSLDLTTCNIMIDVYGQLD 163

Query: 525 MAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYN 346
           MAKEAD+LFWSMRK+GIEPNV+SYNTLLRVYG+AELFGEAIHLFRLMQRK+IEQNVVTYN
Sbjct: 164 MAKEADKLFWSMRKIGIEPNVISYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYN 223

Query: 345 TMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSS 166
           TM+ IYGK+LEHEKA NL+QEM N GI PNA+TYSTIISIWGK GKLDRAA LFQKLRSS
Sbjct: 224 TMMMIYGKTLEHEKANNLIQEMHNXGIEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSS 283

Query: 165 GVEIDQVLYQTMIVAYERAGLIGHAKRLLHELKRPDNIPRETAVSILVGAGRIEE 1
           GVEIDQVLYQTMIVAYERAGL+ HAKRLLHELKRPDNIPR+TA  IL GAGRIEE
Sbjct: 284 GVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAXHILAGAGRIEE 338



 Score =  117 bits (292), Expect = 5e-24
 Identities = 73/239 (30%), Positives = 123/239 (51%), Gaps = 4/239 (1%)
 Frame = -1

Query: 708 EEMRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQL 529
           + M    V  D V YS L+    +   + +A+SIFS +    +  D    N MI+V+G+ 
Sbjct: 33  QXMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDXVAYNSMINVFGKA 92

Query: 528 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 349
            + KEA  L   M+  G+ P+ VSY+TLL +Y E + F EA+ +F  M+      ++ T 
Sbjct: 93  KLFKEARSLISEMKTAGVXPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCSLDLTTC 152

Query: 348 NTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRS 169
           N MI +YG+    ++A  L   M+  GI PN ++Y+T++ ++G A     A  LF+ ++ 
Sbjct: 153 NIMIDVYGQLDMAKEADKLFWSMRKIGIEPNVISYNTLLRVYGDAELFGEAIHLFRLMQR 212

Query: 168 SGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELK----RPDNIPRETAVSILVGAGRIE 4
             +E + V Y TM++ Y +      A  L+ E+      P+ I   T +SI    G+++
Sbjct: 213 KNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNXGIEPNAITYSTIISIWGKVGKLD 271



 Score =  106 bits (264), Expect = 9e-21
 Identities = 62/212 (29%), Positives = 117/212 (55%)
 Frame = -1

Query: 699 RAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDMA 520
           R   ++P+  +YSTL+T F +   F +ALS    M + RVP DL   + +I++  +L   
Sbjct: 1   RZRALSPERYTYSTLITHFGKEGLFDDALSWLQXMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 519 KEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTM 340
            +A  +F  +++ GI P+ V+YN+++ V+G+A+LF EA  L   M+   +  + V+Y+T+
Sbjct: 61  SKAISIFSRLKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTL 120

Query: 339 IKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKLRSSGV 160
           + +Y ++ +  +A ++  EM+      +  T + +I ++G+      A  LF  +R  G+
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCSLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGI 180

Query: 159 EIDQVLYQTMIVAYERAGLIGHAKRLLHELKR 64
           E + + Y T++  Y  A L G A  L   ++R
Sbjct: 181 EPNVISYNTLLRVYGDAELFGEAIHLFRLMQR 212



 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 48/246 (19%), Positives = 97/246 (39%), Gaps = 66/246 (26%)
 Frame = -1

Query: 702 MRAAEVAPDTVSYSTLLTTFVENRRFLEALSIFSEMNEVRVPLDLTTCNIMIDVYGQLDM 523
           MR   + P+ +SY+TLL  + +   F EA+ +F  M    +  ++ T N M+ +YG+   
Sbjct: 175 MRKIGIEPNVISYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLE 234

Query: 522 AKEADRLFWSMRKMGIEPNVVSYN-----------------------------------T 448
            ++A+ L   M   GIEPN ++Y+                                   T
Sbjct: 235 HEKANNLIQEMHNXGIEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQVLYQT 294

Query: 447 LLRVYGEAELFGEAIHLFRLMQRKD----------------IEQ---------------N 361
           ++  Y  A L   A  L   ++R D                IE+               +
Sbjct: 295 MIVAYERAGLVAHAKRLLHELKRPDNIPRDTAXHILAGAGRIEEATWVFRQAIDAGEVKD 354

Query: 360 VVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQ 181
           +  ++ MI ++ K  ++     +  +M+  G  P++   + +++ +GK  + D+A  ++ 
Sbjct: 355 ITVFSRMIDLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKAHXVYM 414

Query: 180 KLRSSG 163
            ++  G
Sbjct: 415 NMQDEG 420



 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
 Frame = -1

Query: 354 TYNTMIKIYGKSLEHEKATNLVQEMQNRGIMPNAVTYSTIISIWGKAGKLDRAAMLFQKL 175
           TY+T+I  +GK    + A + +Q M+   +  + V YS +I +  K     +A  +F +L
Sbjct: 11  TYSTLITHFGKEGLFDDALSWLQXMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 70

Query: 174 RSSGVEIDQVLYQTMIVAYERAGLIGHAKRLLHELK----RPDNIPRETAVSILV 22
           + SG+  D V Y +MI  + +A L   A+ L+ E+K     PD +   T +++ V
Sbjct: 71  KRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTLLTMYV 125


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