BLASTX nr result

ID: Akebia27_contig00035895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00035895
         (360 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69109.1| hypothetical protein VITISV_025716 [Vitis vinifera]    50   2e-07
ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein A...    53   2e-07
ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein A...    53   2e-07
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A...    50   8e-07
ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A...    50   8e-07
emb|CAN70998.1| hypothetical protein VITISV_023635 [Vitis vinifera]    50   5e-06

>emb|CAN69109.1| hypothetical protein VITISV_025716 [Vitis vinifera]
          Length = 1241

 Score = 50.1 bits (118), Expect(2) = 2e-07
 Identities = 25/66 (37%), Positives = 32/66 (48%)
 Frame = -3

Query: 256 KGITSVNFCFLCKANSEFVNHLLIRCAFAREVRLHFLSLFHIPWCFTLSFIALFQSWFIK 77
           +G + VN C LCK N E  +H+LI C   RE     LS F + W F  S   L   W +K
Sbjct: 635 RGWSMVNRCSLCKENEESADHILIHCGXTREFWTLLLSSFGVXWVFPASVRNLLLEWKVK 694

Query: 76  AFFHRK 59
               +K
Sbjct: 695 GLGTKK 700



 Score = 30.4 bits (67), Expect(2) = 2e-07
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -2

Query: 80  KGLLS*ERILWSLTPFAGCWGIWKER 3
           KGL + +R++W L P    W IW+ER
Sbjct: 694 KGLGTKKRVVWRLAPICLFWCIWEER 719


>ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 399

 Score = 53.1 bits (126), Expect(2) = 2e-07
 Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
 Frame = -3

Query: 355 LKIHPWP-----RVASKVSFFIRVAGLQKNPHYGSHNSKGITSVNFCFLCKANSEFVNHL 191
           + I PW      R+  KVS FI +   +      +   +GIT  + CFLC   SE VNHL
Sbjct: 232 IPIWPWRQIWKGRIPYKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETSETVNHL 291

Query: 190 LIRCAFAREVRLHFLSLFHIPWCFTLSFIALFQSW 86
            + C F +++   FLSL  I W          +SW
Sbjct: 292 FLHCKFTQQLWRVFLSLKGISWAMPRRITEALKSW 326



 Score = 27.3 bits (59), Expect(2) = 2e-07
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 77  GLLS*ERILWSLTPFAGCWGIWKER 3
           G+L+ +R  W + P +  W  WKER
Sbjct: 330 GVLAKDRTRWRIIPASIWWATWKER 354


>ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 323

 Score = 53.1 bits (126), Expect(2) = 2e-07
 Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
 Frame = -3

Query: 355 LKIHPWP-----RVASKVSFFIRVAGLQKNPHYGSHNSKGITSVNFCFLCKANSEFVNHL 191
           + I PW      R+  KVS FI +   +      +   +GIT  + CFLC   SE VNHL
Sbjct: 156 IPIWPWRQIWKGRIPYKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETSETVNHL 215

Query: 190 LIRCAFAREVRLHFLSLFHIPWCFTLSFIALFQSW 86
            + C F +++   FLSL  I W          +SW
Sbjct: 216 FLHCKFTQQLWRVFLSLKGISWAMPRRITEALKSW 250



 Score = 27.3 bits (59), Expect(2) = 2e-07
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 77  GLLS*ERILWSLTPFAGCWGIWKER 3
           G+L+ +R  W + P +  W  WKER
Sbjct: 254 GVLAKDRTRWRIIPASIWWATWKER 278


>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 556

 Score = 50.1 bits (118), Expect(2) = 8e-07
 Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
 Frame = -3

Query: 349 IHPWP-----RVASKVSFFIRVAGLQKNPHYGSHNSKGITSVNFCFLCKANSEFVNHLLI 185
           I PW      R+  KVS FI +   +      +   +GIT  + CFLC    E VNHL +
Sbjct: 391 IWPWKQVWKCRIPHKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETLETVNHLFL 450

Query: 184 RCAFAREVRLHFLSLFHIPWCFTLSFIALFQSW 86
            C + R++   FLSL  I W           SW
Sbjct: 451 HCKYTRQLWRIFLSLKGISWTMPRRVTEALYSW 483



 Score = 28.5 bits (62), Expect(2) = 8e-07
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 77  GLLS*ERILWSLTPFAGCWGIWKER 3
           G L+ +R  W + P +  W IWKER
Sbjct: 487 GALAKDRTRWRIIPASIWWAIWKER 511


>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 450

 Score = 50.1 bits (118), Expect(2) = 8e-07
 Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
 Frame = -3

Query: 349 IHPWP-----RVASKVSFFIRVAGLQKNPHYGSHNSKGITSVNFCFLCKANSEFVNHLLI 185
           I PW      R+  KVS FI +   +      +   +GIT  + CFLC    E VNHL +
Sbjct: 285 IWPWKQVWKCRIPHKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETLETVNHLFL 344

Query: 184 RCAFAREVRLHFLSLFHIPWCFTLSFIALFQSW 86
            C + R++   FLSL  I W           SW
Sbjct: 345 HCKYTRQLWRIFLSLKGISWTMPRRVTEALYSW 377



 Score = 28.5 bits (62), Expect(2) = 8e-07
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 77  GLLS*ERILWSLTPFAGCWGIWKER 3
           G L+ +R  W + P +  W IWKER
Sbjct: 381 GALAKDRTRWRIIPASIWWAIWKER 405


>emb|CAN70998.1| hypothetical protein VITISV_023635 [Vitis vinifera]
          Length = 501

 Score = 49.7 bits (117), Expect(2) = 5e-06
 Identities = 26/66 (39%), Positives = 33/66 (50%)
 Frame = -3

Query: 256 KGITSVNFCFLCKANSEFVNHLLIRCAFAREVRLHFLSLFHIPWCFTLSFIALFQSWFIK 77
           +G + VN C LCK N E  +H+LI C   RE+    LS F + W F  S   L   W IK
Sbjct: 373 RGWSMVNRCVLCKENEESTDHILIHCGKTRELWTVVLSSFGVVWVFPNSVRNLLLEWKIK 432

Query: 76  AFFHRK 59
               R+
Sbjct: 433 GLEKRR 438



 Score = 26.2 bits (56), Expect(2) = 5e-06
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 80  KGLLS*ERILWSLTPFAGCWGIWKER 3
           KGL     ++W + P    W IW ER
Sbjct: 432 KGLEKRRSVVWKMVPICLFWCIWGER 457


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