BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00035665
         (442 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containi...   223   3e-56
ref|XP_007222375.1| hypothetical protein PRUPE_ppa004015mg [Prun...   208   7e-52
ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containi...   208   7e-52
ref|XP_007157581.1| hypothetical protein PHAVU_002G081200g [Phas...   202   4e-50
ref|XP_004490153.1| PREDICTED: pentatricopeptide repeat-containi...   195   6e-48
gb|EYU28838.1| hypothetical protein MIMGU_mgv1a003966mg [Mimulus...   193   2e-47
ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago t...   193   2e-47
ref|XP_006344328.1| PREDICTED: pentatricopeptide repeat-containi...   191   1e-46
ref|XP_007045928.1| Pentatricopeptide repeat-containing protein ...   191   1e-46
gb|EXB65077.1| hypothetical protein L484_004253 [Morus notabilis]     190   2e-46
ref|XP_004237221.1| PREDICTED: pentatricopeptide repeat-containi...   189   3e-46
ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   186   4e-45
ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containi...   186   4e-45
ref|XP_002512113.1| pentatricopeptide repeat-containing protein,...   167   1e-39
ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containi...   134   2e-29
emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]   134   2e-29
ref|XP_006289319.1| hypothetical protein CARUB_v10002804mg [Caps...   133   2e-29
gb|AEP33763.1| organelle transcript processing 82, partial [Isat...   133   2e-29
ref|XP_002873264.1| pentatricopeptide repeat-containing protein ...   133   2e-29
ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containi...   133   3e-29

>ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 536

 Score =  223 bits (567), Expect = 3e-56
 Identities = 105/145 (72%), Positives = 121/145 (83%)
 Frame = +1

Query: 7   LGEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYA 186
           LGE  HGQS KLGF  DIFVGNTLI MYS  G +  AR +FDE+P+ T VSWT+MI GYA
Sbjct: 123 LGESAHGQSVKLGFWFDIFVGNTLIAMYSSFGNVRAARCIFDEMPWHTAVSWTVMISGYA 182

Query: 187 KQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIFVS 366
           K GDVE AR++FD APMKDRGIWGS+IS YV NNCFKEGL+MFRLMQ T LEPDEAI VS
Sbjct: 183 KVGDVETARMLFDEAPMKDRGIWGSIISGYVQNNCFKEGLQMFRLMQSTGLEPDEAILVS 242

Query: 367 VLCACAHLGSMDIGIWIHGYLDRIG 441
           +LCACAHLG+M+IG+W+H YLD++G
Sbjct: 243 ILCACAHLGAMEIGVWVHRYLDQLG 267


>ref|XP_007222375.1| hypothetical protein PRUPE_ppa004015mg [Prunus persica]
           gi|462419311|gb|EMJ23574.1| hypothetical protein
           PRUPE_ppa004015mg [Prunus persica]
          Length = 535

 Score =  208 bits (529), Expect = 7e-52
 Identities = 98/144 (68%), Positives = 117/144 (81%)
 Frame = +1

Query: 7   LGEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYA 186
           LGE  HG S KLGF+ DIFVGN+LI+MY     +  ARH+FDEIP  + VSWT+MI G++
Sbjct: 127 LGELVHGCSLKLGFVSDIFVGNSLIVMYCAFDDMKAARHIFDEIPSLSAVSWTVMISGHS 186

Query: 187 KQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIFVS 366
           K GD++ ARL FD AP++DRGIWG+MIS YV NNCFKEGL MFRLMQ T +EPDEAIFVS
Sbjct: 187 KAGDLDTARLFFDEAPVRDRGIWGAMISGYVQNNCFKEGLYMFRLMQLTEIEPDEAIFVS 246

Query: 367 VLCACAHLGSMDIGIWIHGYLDRI 438
           VLCACAHLG++D GIWIH YL+R+
Sbjct: 247 VLCACAHLGALDTGIWIHSYLNRL 270


>ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Glycine max]
          Length = 518

 Score =  208 bits (529), Expect = 7e-52
 Identities = 97/143 (67%), Positives = 120/143 (83%)
 Frame = +1

Query: 7   LGEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYA 186
           LG+  HG SSKLG + DIFVGN+L+ MYSVCG ++ ARHVFDE+P  + VSW++MI GYA
Sbjct: 123 LGKMVHGYSSKLGLVFDIFVGNSLMAMYSVCGDVIAARHVFDEMPRLSAVSWSVMISGYA 182

Query: 187 KQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIFVS 366
           K GDV++ARL FD AP KDRGIWG+MIS YV N+CFKEGL +FRL+Q T++ PDE+IFVS
Sbjct: 183 KVGDVDSARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTHVVPDESIFVS 242

Query: 367 VLCACAHLGSMDIGIWIHGYLDR 435
           +L ACAHLG++DIGIWIH YL+R
Sbjct: 243 ILSACAHLGALDIGIWIHRYLNR 265



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/83 (33%), Positives = 48/83 (57%)
 Frame = +1

Query: 163 TLMIYGYAKQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLE 342
           T ++  YAK G++E A+ +FD  P +D   W +MIS    +      L+MF  M++T ++
Sbjct: 276 TSLLDMYAKCGNLELAKRLFDSMPERDIVCWNAMISGLAMHGDGASALKMFSEMEKTGIK 335

Query: 343 PDEAIFVSVLCACAHLGSMDIGI 411
           PD+  F++V  AC++ G    G+
Sbjct: 336 PDDITFIAVFTACSYSGMAHEGL 358


>ref|XP_007157581.1| hypothetical protein PHAVU_002G081200g [Phaseolus vulgaris]
           gi|561030996|gb|ESW29575.1| hypothetical protein
           PHAVU_002G081200g [Phaseolus vulgaris]
          Length = 517

 Score =  202 bits (514), Expect = 4e-50
 Identities = 96/143 (67%), Positives = 117/143 (81%)
 Frame = +1

Query: 7   LGEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYA 186
           LG+  HG SSK G + DIFVGN+L+ MYSVCG +V AR+VFDEIP  + VSW++MI GYA
Sbjct: 123 LGQMVHGYSSKAGLVYDIFVGNSLMAMYSVCGDVVAARYVFDEIPRLSAVSWSVMISGYA 182

Query: 187 KQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIFVS 366
           K GDV++ARL FD AP KDRGIWG+MIS YV N+CFKEGL +FRL+Q T + PDE+I VS
Sbjct: 183 KVGDVDSARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTEVVPDESICVS 242

Query: 367 VLCACAHLGSMDIGIWIHGYLDR 435
           +L ACAHLG++DIGIWIH YL+R
Sbjct: 243 ILSACAHLGALDIGIWIHRYLNR 265


>ref|XP_004490153.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Cicer arietinum]
          Length = 523

 Score =  195 bits (495), Expect = 6e-48
 Identities = 92/143 (64%), Positives = 117/143 (81%)
 Frame = +1

Query: 7   LGEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYA 186
           LG+  HG  SKLG + DIFVGN+L+ MY V G +V AR+VFDEIP  ++VSW++MI GYA
Sbjct: 125 LGKLVHGYGSKLGLVFDIFVGNSLMSMYVVFGDVVAARYVFDEIPCLSLVSWSVMISGYA 184

Query: 187 KQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIFVS 366
           K G+V++ARL FD AP KD+GIWG+MIS YV N+CFKE L +FRLMQ T++ PDE+IFVS
Sbjct: 185 KMGNVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVS 244

Query: 367 VLCACAHLGSMDIGIWIHGYLDR 435
           +L ACAHLG++DIG+WIH YL+R
Sbjct: 245 ILSACAHLGALDIGVWIHRYLNR 267


>gb|EYU28838.1| hypothetical protein MIMGU_mgv1a003966mg [Mimulus guttatus]
          Length = 552

 Score =  193 bits (491), Expect = 2e-47
 Identities = 94/145 (64%), Positives = 116/145 (80%)
 Frame = +1

Query: 7   LGEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYA 186
           LGE  HG ++KLGFL D FVGN+LI+MYS  G +  AR  FDEI    VVSWT++I GYA
Sbjct: 122 LGESIHGHAAKLGFLSDNFVGNSLIVMYSDFGEMGAARIAFDEIYCHCVVSWTVLISGYA 181

Query: 187 KQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIFVS 366
           K+GDV +AR VFD A +KDRGIWG+MIS YV N+CFKEGL++FRLMQ + ++PDEA FVS
Sbjct: 182 KKGDVYSARSVFDEARLKDRGIWGAMISGYVQNSCFKEGLKLFRLMQLSGIKPDEANFVS 241

Query: 367 VLCACAHLGSMDIGIWIHGYLDRIG 441
           VLCACAHLGS++IG WIH Y+ ++G
Sbjct: 242 VLCACAHLGSLEIGKWIHIYVGKVG 266



 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
 Frame = +1

Query: 7   LGEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYA 186
           +G+  H    K+G    + +G  LI MYS CGC+  A  VFD++P+R V+ W  MI GYA
Sbjct: 254 IGKWIHIYVGKVGMRVSVKLGTALIDMYSKCGCLDLAEQVFDKLPHRDVICWNTMISGYA 313

Query: 187 KQGDVENARLVFD----CAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLM 324
             GD E+A  +FD         D   + S+ S   ++   KEGL + R M
Sbjct: 314 MNGDGESALRLFDKMEKLGVRPDNVTFVSLFSACSYSGMAKEGLRLLRTM 363


>ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355515352|gb|AES96975.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 525

 Score =  193 bits (491), Expect = 2e-47
 Identities = 90/143 (62%), Positives = 117/143 (81%)
 Frame = +1

Query: 10  GEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYAK 189
           G+  HG SSKLG + DI+VGN+L+ MY V G +V AR+VFDEIP   VVSW++MI GYAK
Sbjct: 126 GKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAK 185

Query: 190 QGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIFVSV 369
            GDV++ARL FD AP KD+GIWG+MIS YV N+CFKE L +FRLMQ T++ PDE+IFVS+
Sbjct: 186 VGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSI 245

Query: 370 LCACAHLGSMDIGIWIHGYLDRI 438
           L ACAHLG+++IG+WIH +L+++
Sbjct: 246 LSACAHLGALEIGVWIHQHLNQL 268


>ref|XP_006344328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Solanum tuberosum]
          Length = 530

 Score =  191 bits (484), Expect = 1e-46
 Identities = 92/146 (63%), Positives = 109/146 (74%)
 Frame = +1

Query: 1   YRLGEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYG 180
           + LGE  HGQ  KLGFL D FVGN+LI  Y+    +  AR VF EIP   VVSWT++I G
Sbjct: 123 FHLGELVHGQILKLGFLIDTFVGNSLIGFYTCFDNVEAARSVFYEIPCNCVVSWTVLICG 182

Query: 181 YAKQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIF 360
           YAK GDV  ARL+FD   +KDRG+WG MISCYV NNCFKEGL++FR MQ + +EPDEAI 
Sbjct: 183 YAKTGDVYEARLIFDECLVKDRGVWGCMISCYVQNNCFKEGLQLFRQMQMSGIEPDEAIL 242

Query: 361 VSVLCACAHLGSMDIGIWIHGYLDRI 438
           VSVL ACAHLG +DIGIWIH Y+ ++
Sbjct: 243 VSVLSACAHLGCVDIGIWIHKYVKKL 268



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 39/135 (28%), Positives = 61/135 (45%)
 Frame = +1

Query: 7   LGEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYA 186
           +G   H    KL     I +G  LI MY+ CGC+  A  VFDE+P R ++ W  MI G+A
Sbjct: 257 IGIWIHKYVKKLKMGSSIKLGTALIDMYAKCGCLDIAEKVFDEMPIRDLICWNAMISGFA 316

Query: 187 KQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIFVS 366
             G+                G+               + L++F  MQ++   PD+  F+S
Sbjct: 317 VNGN----------------GL---------------KALKLFNEMQKSRTRPDDVTFIS 345

Query: 367 VLCACAHLGSMDIGI 411
           +  AC++ G  + G+
Sbjct: 346 MFTACSYAGMANEGL 360


>ref|XP_007045928.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
           gi|508709863|gb|EOY01760.1| Pentatricopeptide
           repeat-containing protein [Theobroma cacao]
          Length = 523

 Score =  191 bits (484), Expect = 1e-46
 Identities = 90/145 (62%), Positives = 111/145 (76%)
 Frame = +1

Query: 1   YRLGEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYG 180
           +  GE  +G   KLGF+ DIFVGN LI M+     +  AR++FDEIP+   VSWT+MI G
Sbjct: 121 FYFGELVYGHCLKLGFVFDIFVGNALIAMFCAFDNVKVARYIFDEIPWPDFVSWTVMISG 180

Query: 181 YAKQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIF 360
           Y K GD++ ARL+FD A +KD GIWG+MIS YV NNCFKEGL MFRLMQ +++EPDEAI+
Sbjct: 181 YGKIGDIDTARLLFDEASVKDAGIWGAMISGYVKNNCFKEGLYMFRLMQMSDIEPDEAIY 240

Query: 361 VSVLCACAHLGSMDIGIWIHGYLDR 435
           VSVLCACAHLG++D GIWIH YL +
Sbjct: 241 VSVLCACAHLGALDTGIWIHKYLGK 265


>gb|EXB65077.1| hypothetical protein L484_004253 [Morus notabilis]
          Length = 508

 Score =  190 bits (483), Expect = 2e-46
 Identities = 89/145 (61%), Positives = 108/145 (74%)
 Frame = +1

Query: 7   LGEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYA 186
           LG   HG   K G   D+FVGN+LI+MYS    +  AR VFDE+P  + VSW +MI GY 
Sbjct: 107 LGVSVHGHGLKSGLAFDLFVGNSLIVMYSEFRNMEAARQVFDEMPSLSTVSWMVMISGYG 166

Query: 187 KQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIFVS 366
           K G+V+  RL FD AP++DRGIWG+MIS YV N CFKEGL +FRLMQ   +EPDEAIFVS
Sbjct: 167 KVGEVDKERLFFDLAPVRDRGIWGAMISGYVQNACFKEGLYLFRLMQCAEIEPDEAIFVS 226

Query: 367 VLCACAHLGSMDIGIWIHGYLDRIG 441
           VLC CAHLG++D+G+WIH YLDR+G
Sbjct: 227 VLCGCAHLGALDVGVWIHRYLDRLG 251



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/71 (35%), Positives = 41/71 (57%)
 Frame = +1

Query: 181 YAKQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIF 360
           YAK G+++ AR+VF+  P KD   W +MIS    +       E+F  M+   + PD+  F
Sbjct: 266 YAKCGNLDLARMVFEKMPQKDTVCWNAMISAMAMHGDGDTAFELFEEMEEAGVRPDDITF 325

Query: 361 VSVLCACAHLG 393
           +++L AC++ G
Sbjct: 326 IAILTACSYSG 336


>ref|XP_004237221.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Solanum lycopersicum]
          Length = 586

 Score =  189 bits (481), Expect = 3e-46
 Identities = 92/144 (63%), Positives = 108/144 (75%)
 Frame = +1

Query: 7   LGEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYA 186
           LGE  HGQ  KLGFL D FVGN+LI  Y+    +  AR VF EIP   VVSWT++I GYA
Sbjct: 125 LGELVHGQILKLGFLIDTFVGNSLIGFYTCFDNVEAARSVFYEIPCNCVVSWTVLICGYA 184

Query: 187 KQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIFVS 366
           K+GDV  ARLVFD   +KDRG+WG MISCYV NNCFKEGL++FR MQ + +EPDEAI VS
Sbjct: 185 KRGDVYEARLVFDECLVKDRGVWGCMISCYVQNNCFKEGLQLFRQMQMSGIEPDEAILVS 244

Query: 367 VLCACAHLGSMDIGIWIHGYLDRI 438
           VL ACAHLG  DIG+WIH Y+ ++
Sbjct: 245 VLSACAHLGCADIGVWIHRYVKKL 268


>ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g20540-like [Cucumis sativus]
          Length = 532

 Score =  186 bits (471), Expect = 4e-45
 Identities = 88/145 (60%), Positives = 108/145 (74%)
 Frame = +1

Query: 7   LGEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYA 186
           LGE  H  + KLG   + FVGN+L++MY     +  AR VFDE+P  + VSWT+MIYGYA
Sbjct: 123 LGESIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYA 182

Query: 187 KQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIFVS 366
             GDV+ AR +FD A +KD GIWG+MIS YV NNCFKEGL MFRLMQ T +EPDEAI V+
Sbjct: 183 NMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVT 242

Query: 367 VLCACAHLGSMDIGIWIHGYLDRIG 441
           +L ACAH+G++D GIWIH YL R+G
Sbjct: 243 ILSACAHMGALDTGIWIHRYLGRLG 267


>ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Cucumis sativus]
          Length = 532

 Score =  186 bits (471), Expect = 4e-45
 Identities = 88/145 (60%), Positives = 108/145 (74%)
 Frame = +1

Query: 7   LGEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYA 186
           LGE  H  + KLG   + FVGN+L++MY     +  AR VFDE+P  + VSWT+MIYGYA
Sbjct: 123 LGESIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYA 182

Query: 187 KQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIFVS 366
             GDV+ AR +FD A +KD GIWG+MIS YV NNCFKEGL MFRLMQ T +EPDEAI V+
Sbjct: 183 NMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVT 242

Query: 367 VLCACAHLGSMDIGIWIHGYLDRIG 441
           +L ACAH+G++D GIWIH YL R+G
Sbjct: 243 ILSACAHMGALDTGIWIHRYLGRLG 267


>ref|XP_002512113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549293|gb|EEF50782.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 336

 Score =  167 bits (424), Expect = 1e-39
 Identities = 83/133 (62%), Positives = 101/133 (75%)
 Frame = +1

Query: 43  GFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYAKQGDVENARLVF 222
           GF  +  VGN+LI+MY     +  AR+VFDEIP   VVSWTLMI G+AK GD+E+ARL F
Sbjct: 87  GFSVNAVVGNSLILMYCGFCNMRAARYVFDEIPGPCVVSWTLMISGFAKVGDIESARLFF 146

Query: 223 DCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIFVSVLCACAHLGSMD 402
           D AP KDRGI G+MIS YV NNCFKE L MF ++Q T+  PDE IF+S+LCACA LG++D
Sbjct: 147 DGAPRKDRGICGAMISGYVQNNCFKECLYMFSMIQLTDNVPDEGIFLSILCACAQLGALD 206

Query: 403 IGIWIHGYLDRIG 441
            GIWIH Y+DR+G
Sbjct: 207 TGIWIHRYMDRLG 219


>ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
           [Vitis vinifera]
          Length = 576

 Score =  134 bits (336), Expect = 2e-29
 Identities = 64/145 (44%), Positives = 91/145 (62%)
 Frame = +1

Query: 7   LGEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYA 186
           +G Q H Q+   G + DI V   LI MYS CGC+ EAR +FD + +R V  W  M+ GYA
Sbjct: 157 VGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYA 216

Query: 187 KQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIFVS 366
           K GDV+NAR +F+  P ++   W ++I+ Y   +   E + MFR MQ   +EPDE   ++
Sbjct: 217 KVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLA 276

Query: 367 VLCACAHLGSMDIGIWIHGYLDRIG 441
            L ACAHLG++++G WIH Y+D+ G
Sbjct: 277 ALSACAHLGALELGEWIHNYIDKHG 301



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/78 (39%), Positives = 44/78 (56%)
 Frame = +1

Query: 181 YAKQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIF 360
           YAK G +E A  VF     K    W SMI     +   +E LEMF  M+R  ++P+E  F
Sbjct: 316 YAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITF 375

Query: 361 VSVLCACAHLGSMDIGIW 414
           V++L AC H+G +++G W
Sbjct: 376 VAILSACCHVGLVEMGRW 393


>emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
          Length = 576

 Score =  134 bits (336), Expect = 2e-29
 Identities = 64/145 (44%), Positives = 91/145 (62%)
 Frame = +1

Query: 7   LGEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYA 186
           +G Q H Q+   G + DI V   LI MYS CGC+ EAR +FD + +R V  W  M+ GYA
Sbjct: 157 VGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYA 216

Query: 187 KQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIFVS 366
           K GDV+NAR +F+  P ++   W ++I+ Y   +   E + MFR MQ   +EPDE   ++
Sbjct: 217 KVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLA 276

Query: 367 VLCACAHLGSMDIGIWIHGYLDRIG 441
            L ACAHLG++++G WIH Y+D+ G
Sbjct: 277 ALSACAHLGALELGEWIHNYIDKHG 301



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/78 (39%), Positives = 44/78 (56%)
 Frame = +1

Query: 181 YAKQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIF 360
           YAK G +E A  VF     K    W SMI     +   +E LEMF  M+R  ++P+E  F
Sbjct: 316 YAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITF 375

Query: 361 VSVLCACAHLGSMDIGIW 414
           V++L AC H+G +++G W
Sbjct: 376 VAILSACCHVGLVEMGRW 393


>ref|XP_006289319.1| hypothetical protein CARUB_v10002804mg [Capsella rubella]
           gi|482558025|gb|EOA22217.1| hypothetical protein
           CARUB_v10002804mg [Capsella rubella]
          Length = 622

 Score =  133 bits (335), Expect = 2e-29
 Identities = 59/141 (41%), Positives = 94/141 (66%)
 Frame = +1

Query: 7   LGEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYA 186
           +GEQ H Q  + GF  D++V N+L+ MY+ CG I  A  +F ++P+R VVSWT M+ GY 
Sbjct: 135 IGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYC 194

Query: 187 KQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIFVS 366
           K G +E+AR +FD  P ++   W  MI+ Y  NNCF++ +++F L++R  +  +E + VS
Sbjct: 195 KCGMIEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELLKREGVVANETVMVS 254

Query: 367 VLCACAHLGSMDIGIWIHGYL 429
           V+ +CAHLG+++ G+  H Y+
Sbjct: 255 VISSCAHLGALEHGVRAHEYV 275


>gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  133 bits (335), Expect = 2e-29
 Identities = 65/144 (45%), Positives = 94/144 (65%)
 Frame = +1

Query: 10  GEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYAK 189
           G+Q HGQ  KLGF  D++V  +LI MY     + +A  VFD   +R VVS+T +I GYA 
Sbjct: 83  GQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYAS 142

Query: 190 QGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIFVSV 369
           +GD+ +A+ +FD  P+KD   W +MIS Y    C+KE LE+F  M + N+ PDE+ +V+V
Sbjct: 143 RGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTV 202

Query: 370 LCACAHLGSMDIGIWIHGYLDRIG 441
           L ACAH GS+++G  +H ++D  G
Sbjct: 203 LSACAHSGSIELGRQVHSWVDDHG 226



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 55/166 (33%), Positives = 77/166 (46%), Gaps = 39/166 (23%)
 Frame = +1

Query: 55  DIFVGNTLIIMYSVCGCIVEARHVF----------DEIPYRTVVS--------------- 159
           D+   N +I  Y+  GC  EA  +F          DE  Y TV+S               
Sbjct: 160 DVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVH 219

Query: 160 -WT-------------LMIYGYAKQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFK 297
            W               +I  Y+K G+VE A  +F     KD   W ++I  Y H N +K
Sbjct: 220 SWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYK 279

Query: 298 EGLEMFRLMQRTNLEPDEAIFVSVLCACAHLGSMDIGIWIHGYLDR 435
           E L +F+ M R+   P++   +SVL ACAHLG++DIG WIH Y+D+
Sbjct: 280 EALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDK 325



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/82 (35%), Positives = 45/82 (54%)
 Frame = +1

Query: 163 TLMIYGYAKQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLE 342
           T +I  YAK GD+E A  VF+    K    W +MI  +  +       ++F  M++  +E
Sbjct: 338 TSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIE 397

Query: 343 PDEAIFVSVLCACAHLGSMDIG 408
           PD+  FV +L AC+H G +D+G
Sbjct: 398 PDDITFVGLLSACSHSGMLDLG 419


>ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319101|gb|EFH49523.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 624

 Score =  133 bits (335), Expect = 2e-29
 Identities = 61/141 (43%), Positives = 93/141 (65%)
 Frame = +1

Query: 7   LGEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYA 186
           +GEQ H Q  + GF  D++V N+L+ MY+ CG I  A  +F ++P+R VVSWT M+ GY 
Sbjct: 137 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYC 196

Query: 187 KQGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFRLMQRTNLEPDEAIFVS 366
           K G VE+AR +FD  P ++   W  MI+ Y  NNCF++ +++F LM+R  +  +E + VS
Sbjct: 197 KCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVS 256

Query: 367 VLCACAHLGSMDIGIWIHGYL 429
           V+ +CAHLG+++ G   H Y+
Sbjct: 257 VISSCAHLGALEFGERAHEYV 277


>ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 663

 Score =  133 bits (334), Expect = 3e-29
 Identities = 62/143 (43%), Positives = 96/143 (67%), Gaps = 1/143 (0%)
 Frame = +1

Query: 10  GEQFHGQSSKLGFLCDIFVGNTLIIMYSVCGCIVEARHVFDEIPYRTVVSWTLMIYGYAK 189
           GE  HG   K G+  DIFVGN+L+ MYS+   +V+A+ VFDE+P R V++WT ++ GYA 
Sbjct: 176 GENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAM 235

Query: 190 QGDVENARLVFDCAPMKDRGIWGSMISCYVHNNCFKEGLEMFR-LMQRTNLEPDEAIFVS 366
           +G++  AR +FD  P ++   W  M++ YV +  + E L+ F  ++    ++P+EA+ VS
Sbjct: 236 RGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVS 295

Query: 367 VLCACAHLGSMDIGIWIHGYLDR 435
           +L ACAHLG++D G WIH Y+D+
Sbjct: 296 ILSACAHLGALDQGKWIHVYIDK 318