BLASTX nr result

ID: Akebia27_contig00035542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00035542
         (457 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515068.1| conserved hypothetical protein [Ricinus comm...    63   4e-08
ref|XP_002301438.1| hypothetical protein POPTR_0002s17980g [Popu...    57   2e-06

>ref|XP_002515068.1| conserved hypothetical protein [Ricinus communis]
           gi|223545548|gb|EEF47052.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 89

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 33/75 (44%), Positives = 50/75 (66%)
 Frame = -3

Query: 428 MGYCLTMKQQLVHPSSFNGSKDSNPLRIKVRMTAREFNELMSQANQRKGKNDIGRLIVEK 249
           MG CL  KQ +VHP     S     LRIKVRM+AR+  E MS+ + RKG +++GR+++++
Sbjct: 1   MGNCLGRKQ-VVHP--LEHSTSDYKLRIKVRMSARQLKEFMSRVDLRKGDSELGRVVLQE 57

Query: 248 CLNGKFDPQVVEPED 204
           CL+G+   +VV  +D
Sbjct: 58  CLDGRLTARVVGRQD 72


>ref|XP_002301438.1| hypothetical protein POPTR_0002s17980g [Populus trichocarpa]
           gi|222843164|gb|EEE80711.1| hypothetical protein
           POPTR_0002s17980g [Populus trichocarpa]
          Length = 101

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 9/80 (11%)
 Frame = -3

Query: 428 MGYCLTMKQQLVHPSSFNG---------SKDSNPLRIKVRMTAREFNELMSQANQRKGKN 276
           MG   + K   VHP   +G         +  S+ LRIKVRMT  +  ELM+ A+  +G +
Sbjct: 1   MGNWFSRKYLAVHPMDQDGEDIVKSSLITPSSSSLRIKVRMTTTQLEELMALADLSEGSS 60

Query: 275 DIGRLIVEKCLNGKFDPQVV 216
           D+GR+I+++CL+G+F  +VV
Sbjct: 61  DLGRVILQECLDGRFRARVV 80


Top