BLASTX nr result

ID: Akebia27_contig00035140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00035140
         (847 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]      64   7e-08
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          63   2e-07
gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Tritic...    61   6e-07
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    60   8e-07
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    59   2e-06

>gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]
          Length = 605

 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 4/118 (3%)
 Frame = -1

Query: 754 YLSTKVISYIIRLWERLMK*GLRRKSKISDNQFGYKLG*ATIAAIFLFRYMKEKS*GNKR 575
           Y   K++S+ ++LWER+++  LRR + ++ NQFG+  G +T+ AIFL R + E+    K+
Sbjct: 60  YRGIKLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMERYREQKK 119

Query: 574 RLSMWFLLT*RSK**STKVVNLMGIG----TIRYINIIKGMHERIVTSVGTNCVEANE 413
            L M F+   +S     + V    +       +YI +IK M++ +VTSV T+ V+ ++
Sbjct: 120 DLHMVFIDLEKSYDKIPRNVMWWALKKHKVPAKYITLIKDMYDNVVTSVRTSDVDTDD 177


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 5/112 (4%)
 Frame = -1

Query: 754 YLSTKVISYIIRLWERLMK*GLRRKSKISDNQFGYKLG*ATIAAIFLFRYMKEKS*GNKR 575
           Y   K++++ ++LWER+++ GLR+++++++NQFG+  G +   AI+L R M E+   NKR
Sbjct: 131 YRGIKLMTHTMKLWERVIERGLRKETQVTENQFGFMSGRSITEAIYLLRRMMERYRSNKR 190

Query: 574 RLSMWFLLT*RS-----K**STKVVNLMGIGTIRYINIIKGMHERIVTSVGT 434
            L M F+   ++     +    KV+  M +  I YI  IK M++   TSV T
Sbjct: 191 DLHMVFIDLEKAYDRVPREVLWKVLEKMRV-RIAYIRAIKDMYDGATTSVKT 241


>gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Triticum urartu]
          Length = 974

 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 37/118 (31%), Positives = 69/118 (58%), Gaps = 4/118 (3%)
 Frame = -1

Query: 754 YLSTKVISYIIRLWERLMK*GLRRKSKISDNQFGYKLG*ATIAAIFLFRYMKEKS*GNKR 575
           Y   K++S+ ++LWER+++  LRR + ++ NQFG+  G +T+ AIFL R + ++    K+
Sbjct: 26  YRGIKLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMKRYREQKK 85

Query: 574 RLSMWFLLT*RSK**STKVVNLMGIG----TIRYINIIKGMHERIVTSVGTNCVEANE 413
            L M F+   ++     + V    +       +YI +IK M++ +VTSV T+ V+ ++
Sbjct: 86  DLHMVFIDLEKAYDKIPRNVMWWALEKHKVPTKYITLIKDMYDNVVTSVRTSDVDIDD 143


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 37/112 (33%), Positives = 67/112 (59%), Gaps = 5/112 (4%)
 Frame = -1

Query: 754 YLSTKVISYIIRLWERLMK*GLRRKSKISDNQFGYKLG*ATIAAIFLFRYMKEKS*GNKR 575
           Y   K++S+ ++LWER+++  LR+++++SDNQFG+  G +T+ AI+L R + E+    K+
Sbjct: 241 YRGIKLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKK 300

Query: 574 RLSMWFLLT*R-----SK**STKVVNLMGIGTIRYINIIKGMHERIVTSVGT 434
            L M F+   +     S+    +++   G+  + YI  IK M+E   T+V T
Sbjct: 301 DLHMVFIDLEKAYDRVSRDIIWRILEKKGV-RVAYIQAIKDMYEGAKTAVRT 351


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
 Frame = -1

Query: 754 YLSTKVISYIIRLWERLMK*GLRRKSKISDNQFGYKLG*ATIAAIFLFRYMKEKS*GNKR 575
           Y   K++S+ ++LWER++K  LR+++ ++DNQFG+ LG +T+ AI+L + + E+   +K+
Sbjct: 219 YRGIKLMSHTMKLWERVIKRRLRKETLVTDNQFGFMLGRSTMEAIYLLQRVMERYRTDKK 278

Query: 574 RLSMWFLLT*RSK**STKVVNLMGIG----TIRYINIIKGMHERIVTSVGT 434
            L + F    +      + +    +      I YI  IK M+ER  TSV T
Sbjct: 279 DLHLVFFDLEKGYDRVPREILWKALEKKRVRIAYIRAIKDMYERASTSVKT 329


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