BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00034921
         (908 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, puta...   264   3e-68
dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]     264   3e-68
ref|XP_002322072.2| hypothetical protein POPTR_0015s04050g [Popu...   250   6e-64
gb|EXB38724.1| Heterodimeric geranylgeranyl pyrophosphate syntha...   244   4e-62
ref|XP_006452381.1| hypothetical protein CICLE_v10008936mg [Citr...   243   8e-62
gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus]     241   2e-61
ref|XP_004491403.1| PREDICTED: heterodimeric geranylgeranyl pyro...   237   5e-60
ref|XP_007020796.1| Geranyl-diphosphate synthase, putative [Theo...   235   2e-59
gb|AEL29573.1| geranyl-diphosphate synthase [Medicago sativa]         235   2e-59
ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medic...   229   1e-57
pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Syn...   228   3e-57
gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antir...   228   3e-57
gb|AFK47692.1| unknown [Medicago truncatula]                          227   4e-57
ref|XP_002278023.1| PREDICTED: geranylgeranyl pyrophosphate synt...   226   1e-56
gb|AGH33891.1| geranyl diphsophate synthase small subunit [Lavan...   224   5e-56
ref|XP_007214528.1| hypothetical protein PRUPE_ppa015010mg [Prun...   222   2e-55
gb|ACQ90681.1| geranyl diphosphate synthase small subunit [Humul...   218   2e-54
emb|CAN63418.1| hypothetical protein VITISV_007690 [Vitis vinifera]   218   2e-54
gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I...   210   5e-52
gb|EXB38722.1| Heterodimeric geranylgeranyl pyrophosphate syntha...   210   7e-52

>ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
           gi|223527725|gb|EEF29831.1| geranyl geranyl
           pyrophosphate synthase, putative [Ricinus communis]
          Length = 308

 Score =  264 bits (675), Expect = 3e-68
 Identities = 135/262 (51%), Positives = 177/262 (67%), Gaps = 1/262 (0%)
 Frame = +3

Query: 18  FWTTINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQREQXX 197
           +WT IN D+++HL+ AIP+R P+ VFEPMHHL F+APR+ APALCIAACELVGG R+Q  
Sbjct: 48  YWTCINADIETHLKEAIPVRPPVVVFEPMHHLTFAAPRSFAPALCIAACELVGGSRDQAL 107

Query: 198 XXXXXXXXXXXXXFTHEHLPLTDRPKTKSKPTAHHAFSANIELLTGDGILPFGFELLARS 377
                        FTHE++PLTDRP+  ++P  HH F  NIELLTGDG++PF FELLA+ 
Sbjct: 108 AAASALRLMIAAAFTHENIPLTDRPRPSARPMFHHTFGPNIELLTGDGMIPFAFELLAQL 167

Query: 378 DDPTGNNSDKILRVILEITRAMGSQGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEG 557
           ++P  +NSD+ILRV++EI+RAMGSQGM++GQY +    +S G EL    W+  V KKKEG
Sbjct: 168 NNPAQDNSDRILRVMIEISRAMGSQGMVEGQYNEFQYDQSVGDELFHVAWLRDVCKKKEG 227

Query: 558 GLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRSL 737
             ++            +EEEIEKLR+YGLYVG I G+     G E+    L+ V +LR L
Sbjct: 228 ASHACAGACGAILGGGNEEEIEKLRRYGLYVGTIQGIYNKVEGNEE--WSLKEVNKLRDL 285

Query: 738 AFKELESF-KEANVETISSIVD 800
           A KEL+ F +E  V  I S+V+
Sbjct: 286 ALKELKDFNEEEKVRAICSLVE 307


>dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 306

 Score =  264 bits (675), Expect = 3e-68
 Identities = 135/268 (50%), Positives = 182/268 (67%), Gaps = 2/268 (0%)
 Frame = +3

Query: 18  FWTTINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQREQXX 197
           +W+++N DLD+HL++AIP+R PL+VFEPM HL+ SAP+  APALCIAACELVGG R Q  
Sbjct: 43  YWSSVNADLDTHLKQAIPIRQPLAVFEPMRHLILSAPQTSAPALCIAACELVGGHRNQAM 102

Query: 198 XXXXXXXXXXXXXFTHEHLPLTDRPKT--KSKPTAHHAFSANIELLTGDGILPFGFELLA 371
                         THE+LPLTDRP+   +++PT    +  NIELL  DGI+P+GFELLA
Sbjct: 103 AAASALRLVHASASTHENLPLTDRPRPMPRTRPTL---YGPNIELLIADGIIPYGFELLA 159

Query: 372 RSDDPTGNNSDKILRVILEITRAMGSQGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKK 551
           R DD   NNS+++LR I+EI+RAMGSQG+++GQY +     SEG E+   GW+  V +KK
Sbjct: 160 RDDDAAENNSNRVLRAIIEISRAMGSQGVIEGQYNESQYEESEGEEIFHVGWLQNVCRKK 219

Query: 552 EGGLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLR 731
           EG L++            SE+EIEKLR+YGLYVGM+ G++      E K   ++ V +LR
Sbjct: 220 EGTLHACAGACGAILGGGSEDEIEKLRRYGLYVGMVQGIL--SKVDERKEWPVKEVNKLR 277

Query: 732 SLAFKELESFKEANVETISSIVDTSYCN 815
            LA KEL+ F +A V+TIS +V+T +CN
Sbjct: 278 DLALKELKDFNQAKVKTISILVETRFCN 305


>ref|XP_002322072.2| hypothetical protein POPTR_0015s04050g [Populus trichocarpa]
           gi|550321901|gb|EEF06199.2| hypothetical protein
           POPTR_0015s04050g [Populus trichocarpa]
          Length = 312

 Score =  250 bits (638), Expect = 6e-64
 Identities = 131/260 (50%), Positives = 174/260 (66%)
 Frame = +3

Query: 18  FWTTINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQREQXX 197
           +WT++N ++D+HL++AIP+R PLSVFEPMHHL F+APR  APALCIAACELVGG R+Q  
Sbjct: 52  YWTSVNDEIDAHLKQAIPIRPPLSVFEPMHHLTFAAPRTTAPALCIAACELVGGNRDQAM 111

Query: 198 XXXXXXXXXXXXXFTHEHLPLTDRPKTKSKPTAHHAFSANIELLTGDGILPFGFELLARS 377
                         THEH+       T ++    H+F +NIELLTGDG++PFG ELLA+S
Sbjct: 112 AAASALRLMHAAALTHEHI-----LSTGNRARIGHSFGSNIELLTGDGMVPFGLELLAKS 166

Query: 378 DDPTGNNSDKILRVILEITRAMGSQGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEG 557
           DD T NNS++ILRVI+EIT+AMGSQGM  GQY Q         +  Q  ++D V KKKEG
Sbjct: 167 DDLTQNNSERILRVIIEITQAMGSQGMALGQYNQF--------QHGQSDYIDHVCKKKEG 218

Query: 558 GLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRSL 737
            L+S            +EEEIEKLR+YGLYVG++ G++   V R+++V + +++  L +L
Sbjct: 219 ELHSCAGAVGAILGGGTEEEIEKLRRYGLYVGLMQGVLSNWVERKEEVSMEKVLNELENL 278

Query: 738 AFKELESFKEANVETISSIV 797
           A KELE F    V+ ISS+V
Sbjct: 279 ALKELEGFDRGKVQAISSLV 298


>gb|EXB38724.1| Heterodimeric geranylgeranyl pyrophosphate synthase small subunit
           [Morus notabilis]
          Length = 306

 Score =  244 bits (622), Expect = 4e-62
 Identities = 129/259 (49%), Positives = 172/259 (66%), Gaps = 2/259 (0%)
 Frame = +3

Query: 27  TINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQREQXXXXX 206
           +I  D+++HL++AIPL++PLSV+ PMHH+ FSAP N APALC+AACELVGG R +     
Sbjct: 48  SITADIEAHLKQAIPLKSPLSVYAPMHHMTFSAPPNPAPALCVAACELVGGDRSKAMAAA 107

Query: 207 XXXXXXXXXXFTHEHLPLTDRPKTKSKP--TAHHAFSANIELLTGDGILPFGFELLARSD 380
                     FTHEHLPLTDRPK K KP  T  H F+ NIELL  D ++PF +EL A SD
Sbjct: 108 SALHLMHAASFTHEHLPLTDRPKPKPKPKPTVDHPFNPNIELLIPDAMVPFAYELSAVSD 167

Query: 381 DPTGNNSDKILRVILEITRAMGSQGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEGG 560
           DPT + S ++LRVI+E+ R MGSQG++D QY ++L +  +G EL    W+D + ++KEG 
Sbjct: 168 DPTQDTSGRVLRVIVELARVMGSQGIVDAQYREVLVSPLDGRELNDIEWVDDMCRRKEGR 227

Query: 561 LYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRSLA 740
           L++            +EEE+E+LRKYGLYVG++ G     +GR  +V  LE V  LR+LA
Sbjct: 228 LHACAAACGAILGGANEEEVERLRKYGLYVGIMQG-YTNRLGR--RVKELERVVELRNLA 284

Query: 741 FKELESFKEANVETISSIV 797
            KEL+ FK   VE ISS +
Sbjct: 285 MKELDHFKGRKVEEISSFI 303


>ref|XP_006452381.1| hypothetical protein CICLE_v10008936mg [Citrus clementina]
           gi|568842242|ref|XP_006475060.1| PREDICTED:
           heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Citrus sinensis]
           gi|557555607|gb|ESR65621.1| hypothetical protein
           CICLE_v10008936mg [Citrus clementina]
          Length = 320

 Score =  243 bits (620), Expect = 8e-62
 Identities = 128/270 (47%), Positives = 174/270 (64%), Gaps = 9/270 (3%)
 Frame = +3

Query: 18  FWTTINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQREQXX 197
           +WT+++ D+ +HL +A+ ++ P+ V+EPM H VF+AP NMAPALC+AACELVGG REQ  
Sbjct: 45  YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAI 104

Query: 198 XXXXXXXXXXXXXFTHEHLPLTDRPKT--KSKPTAHHAFSANIELLTGDGILPFGFELLA 371
                        F HE+LPL+DR     KSKPT +HAF  N ELL  D +LPFG ELLA
Sbjct: 105 VAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164

Query: 372 RSDDPTGNNSDKILRVILEITRAMGSQGMLDGQYIQMLCTRSEGGELCQEGWMD-----Q 536
            SD+P GNNS +ILRV++E+TRAMGSQG+++GQY ++ C++ +  +    G  D     +
Sbjct: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224

Query: 537 VYKKKEGGLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEM 716
            YKKKEG L++            SE+EIE LR+YG YVGMI G++        ++G  E 
Sbjct: 225 TYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV------SRRLGPTEE 278

Query: 717 VERLRSLAFK--ELESFKEANVETISSIVD 800
           +E L+ LAFK  E+ SF + N E I S+VD
Sbjct: 279 IEELKKLAFKLREVNSFNDENAEVIFSLVD 308


>gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus]
          Length = 299

 Score =  241 bits (616), Expect = 2e-61
 Identities = 130/265 (49%), Positives = 179/265 (67%)
 Frame = +3

Query: 21  WTTINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQREQXXX 200
           W  I +D+ +HL+++IP+RAP  VFEPMH+L F+APR  APALCIAACE+VGG  +Q   
Sbjct: 44  WANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQAMA 103

Query: 201 XXXXXXXXXXXXFTHEHLPLTDRPKTKSKPTAHHAFSANIELLTGDGILPFGFELLARSD 380
                       + HE+LPLTDR   + KP   H F++NIELLTGDGI+P+GFELLA+S 
Sbjct: 104 AAAAIHLVHAAAYAHENLPLTDR--RRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSM 161

Query: 381 DPTGNNSDKILRVILEITRAMGSQGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEGG 560
           D   NNSD+ILRVI+EIT+A GS+G++DGQ+ ++    SE       G ++ V KKKEG 
Sbjct: 162 D--SNNSDRILRVIIEITQAAGSKGIIDGQFRELDVIDSE----INMGLIEYVCKKKEGE 215

Query: 561 LYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRSLA 740
           L +            SEEEI KLRK+GLY GMI G +++GVG+ ++  + E+V +LR LA
Sbjct: 216 LNACGAACGAILGGGSEEEIGKLRKFGLYAGMIQG-LVHGVGK-NREEIQELVRKLRYLA 273

Query: 741 FKELESFKEANVETISSIVDTSYCN 815
            +EL+S K   ++TISS+++T  C+
Sbjct: 274 MEELKSLKNRKIDTISSLLETDLCS 298


>ref|XP_004491403.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Cicer arietinum]
          Length = 302

 Score =  237 bits (604), Expect = 5e-60
 Identities = 123/261 (47%), Positives = 171/261 (65%)
 Frame = +3

Query: 18  FWTTINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQREQXX 197
           +W ++  D+++HL+++I ++ PL VFEPMHHLVF+AP+   PALC+AACELVGGQR Q  
Sbjct: 50  YWASLQADIEAHLKQSITIKEPLVVFEPMHHLVFNAPKTTVPALCLAACELVGGQRNQAI 109

Query: 198 XXXXXXXXXXXXXFTHEHLPLTDRPKTKSKPTAHHAFSANIELLTGDGILPFGFELLARS 377
                        +THEHL L+DRP  K KP   HA+  N+ELLTGDGI+PFGFELLARS
Sbjct: 110 SAASALLLMEAATYTHEHLLLSDRP--KPKPVITHAYGPNVELLTGDGIVPFGFELLARS 167

Query: 378 DDPTGNNSDKILRVILEITRAMGSQGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEG 557
           +   G NS++ILRV++EI+RA+GS G++D QY + + + S+G E+C    + +V +K EG
Sbjct: 168 NG--GENSERILRVMVEISRAVGSGGVIDAQYRKTMDSGSDGDEMCHVEGIRRVVEKYEG 225

Query: 558 GLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRSL 737
            L++            SEEEIE+LR YG YVGMI GM+  G   ++K      VE  R  
Sbjct: 226 ELHACGAVCGGVLGGGSEEEIERLRNYGFYVGMIQGMLQRGFKDDNK-----EVEETRKF 280

Query: 738 AFKELESFKEANVETISSIVD 800
           A  EL+ FK+  V+ IS+ ++
Sbjct: 281 ALHELQFFKDREVDAISTFLN 301


>ref|XP_007020796.1| Geranyl-diphosphate synthase, putative [Theobroma cacao]
           gi|508720424|gb|EOY12321.1| Geranyl-diphosphate
           synthase, putative [Theobroma cacao]
          Length = 300

 Score =  235 bits (600), Expect = 2e-59
 Identities = 122/264 (46%), Positives = 171/264 (64%)
 Frame = +3

Query: 18  FWTTINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQREQXX 197
           +W +IN D+++HL++AIP+R PLSV +PMHHL F+ P+N APALC+AACELVGG R+Q  
Sbjct: 38  YWASINADIEAHLKQAIPVREPLSVSQPMHHLTFACPKNTAPALCVAACELVGGHRDQAL 97

Query: 198 XXXXXXXXXXXXXFTHEHLPLTDRPKTKSKPTAHHAFSANIELLTGDGILPFGFELLARS 377
                        FTHE LPLT   + +S  T  HA+  NIELL GD ++P G ELLARS
Sbjct: 98  PAASALHLMYAASFTHEQLPLTQSSRPRS--TIQHAYGPNIELLIGDAMIPSGLELLARS 155

Query: 378 DDPTGNNSDKILRVILEITRAMGSQGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEG 557
           DDP   +S+++LRV++EITRA GSQGM+ GQY ++   +S   E      ++++ +K EG
Sbjct: 156 DDPAHTDSERVLRVMVEITRATGSQGMIHGQYYEVERCQSGNKEASYMVEIERISEKYEG 215

Query: 558 GLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRSL 737
            L++            SEEEIEK+R+YGLY+G I GM+     R     L ++VE LR+L
Sbjct: 216 ALHACAAACGAIVGGGSEEEIEKMRRYGLYIGKIQGML--NRIRSHDQELNKLVEELRNL 273

Query: 738 AFKELESFKEANVETISSIVDTSY 809
           A +EL+ F EA +  ISS  ++++
Sbjct: 274 ASRELQGFYEAKIAAISSCFESNF 297


>gb|AEL29573.1| geranyl-diphosphate synthase [Medicago sativa]
          Length = 301

 Score =  235 bits (599), Expect = 2e-59
 Identities = 121/262 (46%), Positives = 175/262 (66%), Gaps = 1/262 (0%)
 Frame = +3

Query: 18  FWTTINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQREQXX 197
           +W +++ D+++HL++ I ++ PL VFEPMHHL+F+AP+   PALC+AACELVGGQR++  
Sbjct: 46  YWASLHADVEAHLKQTITIKEPLLVFEPMHHLIFTAPKTTVPALCLAACELVGGQRQEAI 105

Query: 198 XXXXXXXXXXXXXFTHEHLPLTDRPKTKSKPTAHHAFSANIELLTGDGILPFGFELLARS 377
                        +THEHLPL+DRP  K  P   H +  N+ELLTGDGI+PFGFELLARS
Sbjct: 106 SAASALLLMEAATYTHEHLPLSDRPGPKPGPMIDHVYGPNVELLTGDGIVPFGFELLARS 165

Query: 378 DDPTGNNSDKILRVILEITRAMGS-QGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKE 554
           D   G NS++IL+V++EI+RA+GS  G++D QY++ L   S+G E+C    + +V +K E
Sbjct: 166 DG--GENSERILKVMVEISRAVGSGGGVIDAQYMKTLGGGSDGDEICHVEEIRRVVEKYE 223

Query: 555 GGLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRS 734
           G L+S             EEEIE+LRK+G YVG+I GM+ +G   + K    E+VE  R+
Sbjct: 224 GRLHSCGAVCGGVLGGGCEEEIERLRKFGFYVGIIQGMIKWGFKEDHK----EVVE-ARN 278

Query: 735 LAFKELESFKEANVETISSIVD 800
           LA +EL+ FK+  V+ I + ++
Sbjct: 279 LAIQELKFFKDKEVDAIKTFLN 300


>ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
           gi|355518891|gb|AET00515.1| Geranylgeranyl pyrophosphate
           synthase [Medicago truncatula]
          Length = 297

 Score =  229 bits (583), Expect = 1e-57
 Identities = 121/262 (46%), Positives = 173/262 (66%), Gaps = 1/262 (0%)
 Frame = +3

Query: 18  FWTTINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQREQXX 197
           +W +++ D+++HL++ I ++ PL VFEPMHHL+F+AP+   PALC+A CELVGGQR Q  
Sbjct: 46  YWASLHADIEAHLKQTITIKEPLVVFEPMHHLIFTAPKTTVPALCLATCELVGGQRHQAI 105

Query: 198 XXXXXXXXXXXXXFTHEHLPLTDRPKTKSKPTAHHAFSANIELLTGDGILPFGFELLARS 377
                        +THEHLPLTDRP    +P  +H +  N+ELLTGDGI+PFGFELLARS
Sbjct: 106 SAASALLLMEAATYTHEHLPLTDRP----RPMINHVYGPNMELLTGDGIVPFGFELLARS 161

Query: 378 DDPTGNNSDKILRVILEITRAMGS-QGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKE 554
           D   G NS++IL+V++EI+RA+GS  G++D QY ++L + S+G E C    +  V +K E
Sbjct: 162 DG--GENSERILKVMVEISRAVGSGGGVIDAQYGKILYSGSDGEEKCHVEEIRHVVEKYE 219

Query: 555 GGLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRS 734
           G L+S             EEEIE+LRK+G YVG+I GM+ +G   + K    E+VE  R+
Sbjct: 220 GRLHSCGAVCGGVLGGGCEEEIERLRKFGYYVGIIQGMIKWGFKEDHK----EVVE-ARN 274

Query: 735 LAFKELESFKEANVETISSIVD 800
           LA +EL+ FK+  V+ I + ++
Sbjct: 275 LAIQELKFFKDKEVDAIKTFLN 296


>pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small
           Subunit From Antirrhinum Majus gi|323463188|pdb|3QKC|A
           Chain A, Crystal Structure Of Geranyl Diphosphate
           Synthase Small Subunit From Antirrhinum Majus
          Length = 273

 Score =  228 bits (581), Expect = 3e-57
 Identities = 121/261 (46%), Positives = 167/261 (63%)
 Frame = +3

Query: 27  TINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQREQXXXXX 206
           TI +D++S+L++AIP+RAP SVFEPMHHL F+APR  A ALC+AACELVGG R       
Sbjct: 12  TIESDIESYLKKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDRSDAMAAA 71

Query: 207 XXXXXXXXXXFTHEHLPLTDRPKTKSKPTAHHAFSANIELLTGDGILPFGFELLARSDDP 386
                     +THE+LPLTD P +KS+    H F  NIELLTGDGI+PFG EL+ARS DP
Sbjct: 72  AAVHLMHVAAYTHENLPLTDGPMSKSE--IQHKFDPNIELLTGDGIIPFGLELMARSMDP 129

Query: 387 TGNNSDKILRVILEITRAMGSQGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEGGLY 566
           T NN D+ILR I+E+TR MGS+G+++GQY ++   +    EL     ++ V KKKEG L+
Sbjct: 130 TRNNPDRILRAIIELTRVMGSEGIVEGQYHELGLNQLNDLEL-----IEYVCKKKEGTLH 184

Query: 567 SXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRSLAFK 746
           +             E++IEKLR++GLYVG + G++      +++ G    ++ L+ LA K
Sbjct: 185 ACGAACGAILGGCDEDKIEKLRRFGLYVGTVQGLL-----GKNRSGFEGRIKELKELAVK 239

Query: 747 ELESFKEANVETISSIVDTSY 809
           ELESF    +E I  + +  +
Sbjct: 240 ELESFGGEKIELIRGVFELEH 260


>gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus]
          Length = 297

 Score =  228 bits (581), Expect = 3e-57
 Identities = 121/261 (46%), Positives = 167/261 (63%)
 Frame = +3

Query: 27  TINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQREQXXXXX 206
           TI +D++S+L++AIP+RAP SVFEPMHHL F+APR  A ALC+AACELVGG R       
Sbjct: 44  TIESDIESYLKKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDRSDAMAAA 103

Query: 207 XXXXXXXXXXFTHEHLPLTDRPKTKSKPTAHHAFSANIELLTGDGILPFGFELLARSDDP 386
                     +THE+LPLTD P +KS+    H F  NIELLTGDGI+PFG EL+ARS DP
Sbjct: 104 AAVHLMHVAAYTHENLPLTDGPMSKSE--IQHKFDPNIELLTGDGIIPFGLELMARSMDP 161

Query: 387 TGNNSDKILRVILEITRAMGSQGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEGGLY 566
           T NN D+ILR I+E+TR MGS+G+++GQY ++   +    EL     ++ V KKKEG L+
Sbjct: 162 TRNNPDRILRAIIELTRVMGSEGIVEGQYHELGLNQLNDLEL-----IEYVCKKKEGTLH 216

Query: 567 SXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRSLAFK 746
           +             E++IEKLR++GLYVG + G++      +++ G    ++ L+ LA K
Sbjct: 217 ACGAACGAILGGCDEDKIEKLRRFGLYVGTVQGLL-----GKNRSGFEGRIKELKELAVK 271

Query: 747 ELESFKEANVETISSIVDTSY 809
           ELESF    +E I  + +  +
Sbjct: 272 ELESFGGEKIELIRGVFELEH 292


>gb|AFK47692.1| unknown [Medicago truncatula]
          Length = 297

 Score =  227 bits (579), Expect = 4e-57
 Identities = 120/262 (45%), Positives = 172/262 (65%), Gaps = 1/262 (0%)
 Frame = +3

Query: 18  FWTTINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQREQXX 197
           +W +++ D+++HL++ I ++ PL VFEPMHHL+F+AP+   PALC+A CE VGGQR Q  
Sbjct: 46  YWASLHADIEAHLKQTITIKEPLVVFEPMHHLIFTAPKTTVPALCLATCEFVGGQRHQAI 105

Query: 198 XXXXXXXXXXXXXFTHEHLPLTDRPKTKSKPTAHHAFSANIELLTGDGILPFGFELLARS 377
                        +THEHLPLTDRP    +P  +H +  N+ELLTGDGI+PFGFELLARS
Sbjct: 106 SAASALLLMEAATYTHEHLPLTDRP----RPMINHVYGPNMELLTGDGIVPFGFELLARS 161

Query: 378 DDPTGNNSDKILRVILEITRAMGS-QGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKE 554
           D   G NS++IL+V++EI+RA+GS  G++D QY ++L + S+G E C    +  V +K E
Sbjct: 162 DG--GENSERILKVMVEISRAVGSGGGVIDAQYGKILYSGSDGEEKCHVEEIRHVVEKYE 219

Query: 555 GGLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRS 734
           G L+S             EEEIE+LRK+G YVG+I GM+ +G   + K    E+VE  R+
Sbjct: 220 GRLHSCGAVCGGVLGGGCEEEIERLRKFGYYVGIIQGMIKWGFKEDHK----EVVE-ARN 274

Query: 735 LAFKELESFKEANVETISSIVD 800
           LA +EL+ FK+  V+ I + ++
Sbjct: 275 LAIQELKFFKDKEVDAIKTFLN 296


>ref|XP_002278023.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
           chloroplastic [Vitis vinifera]
          Length = 298

 Score =  226 bits (576), Expect = 1e-56
 Identities = 125/268 (46%), Positives = 163/268 (60%), Gaps = 2/268 (0%)
 Frame = +3

Query: 3   AQ*DWFWTTINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQ 182
           AQ   +WT+IN D+D+HL R I +R P SVF+PMHHL F+AP   APALCIAACELVGG+
Sbjct: 35  AQKSSYWTSINDDIDAHLRRVIAIREPFSVFKPMHHLTFAAPETTAPALCIAACELVGGR 94

Query: 183 REQXXXXXXXXXXXXXXXFTHEHLPLTDRPKTKSKPTAHHAFSANIELLTGDGILPFGFE 362
           RE                + HEH+PLTD+P+  S P     F  NIELLTGDG++PFG E
Sbjct: 95  RELAIAAASALHLMHAASYFHEHIPLTDQPRANSPPRPGPTFGPNIELLTGDGMIPFGLE 154

Query: 363 LLARSD--DPTGNNSDKILRVILEITRAMGSQGMLDGQYIQMLCTRSEGGELCQEGWMDQ 536
           LLA+S+  D    +SD+IL+VI+E+TR +GSQG+++GQYIQ  C  S    + + G    
Sbjct: 155 LLAKSNNLDDDDEHSDRILQVIIELTRTIGSQGVVNGQYIQAQCDES-SPSVGKAGSTRI 213

Query: 537 VYKKKEGGLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEM 716
           V  KK   L++             E+EIEKLRKYG Y G I  M       +++    E+
Sbjct: 214 VTDKKGTELHACGAACGAILGGGKEKEIEKLRKYGFYAGTIQKMSKLEEVEKNR----EV 269

Query: 717 VERLRSLAFKELESFKEANVETISSIVD 800
           +E +R LA KELE F E  VE ISS ++
Sbjct: 270 IEEMRRLALKELEYFDEEKVEPISSFIN 297


>gb|AGH33891.1| geranyl diphsophate synthase small subunit [Lavandula x intermedia]
          Length = 295

 Score =  224 bits (570), Expect = 5e-56
 Identities = 119/264 (45%), Positives = 172/264 (65%), Gaps = 4/264 (1%)
 Frame = +3

Query: 18  FWTTINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQREQXX 197
           +W++I+ D++++L++AIP+R+P +VFEPMHHL F+AP   A ALC+AACEL GG R Q  
Sbjct: 32  YWSSIDADINTYLKKAIPIRSPETVFEPMHHLTFAAPTTTASALCVAACELFGGNRTQAL 91

Query: 198 XXXXXXXXXXXXXFTHEHLPLTDRPKTKSKPTAHHAFSANIELLTGDGILPFGFELLARS 377
                        +TH+HLPLTDRP+ +SKP   H F+ NIELLTGDGI PFGFELLA S
Sbjct: 92  PAASAIHLIHAAAYTHDHLPLTDRPRPESKPDIQHKFNPNIELLTGDGIAPFGFELLANS 151

Query: 378 DDPTGNNSDKILRVILEITRAMGSQGMLDGQY--IQMLCTRSEGGELCQEGWMDQVYKKK 551
            D T  + D+ILRV++EI+RA GSQG++DG Y   Q++  RS      +  +++ V KKK
Sbjct: 152 VDTT--HPDRILRVVIEISRASGSQGLVDGLYREKQIVDQRS------RFEFIEYVSKKK 203

Query: 552 EGGLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGM--MLYGVGREDKVGLLEMVER 725
            G +++             EE+I+KLR +GLY G + GM  M  G+ +++   + +++ +
Sbjct: 204 YGEMHACGAASGVILAGGDEEQIQKLRNFGLYAGTVRGMIEMKSGLEKKNIAQIEKIIIK 263

Query: 726 LRSLAFKELESFKEANVETISSIV 797
            + LA KE+E F+  N E ISS+V
Sbjct: 264 FQQLAMKEMEGFQGKNAELISSLV 287


>ref|XP_007214528.1| hypothetical protein PRUPE_ppa015010mg [Prunus persica]
           gi|462410393|gb|EMJ15727.1| hypothetical protein
           PRUPE_ppa015010mg [Prunus persica]
          Length = 296

 Score =  222 bits (565), Expect = 2e-55
 Identities = 129/259 (49%), Positives = 162/259 (62%), Gaps = 2/259 (0%)
 Frame = +3

Query: 18  FWTTINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQREQXX 197
           +W +++ +++ HL++ I +R PLSVFEPMHHLVFSAP +  PALC+AACELVGG R+Q  
Sbjct: 40  YWASVHAEIEVHLKQHILVRPPLSVFEPMHHLVFSAPPSPGPALCVAACELVGGHRDQAI 99

Query: 198 XXXXXXXXXXXXXFTHEHLPLTDRPKTKSKPTAHHAFSANIELLTGDGILPFGFELLARS 377
                          HE L  TDR KTK KP      S  IELLTGDG+  FG+ELLA+S
Sbjct: 100 AAAAALHLMHAAAVIHEQLLSTDRLKTKPKPRPM-VHSPGIELLTGDGMFAFGYELLAKS 158

Query: 378 DDPTGNNSDKILRVILEITRAMGSQGMLDGQY--IQMLCTRSEGGELCQEGWMDQVYKKK 551
            DP  NNSD+ILRVI+E+TRAMGSQGM+DGQY  I MLC +S             V +KK
Sbjct: 159 MDPAQNNSDRILRVIVEMTRAMGSQGMVDGQYHEILMLCKQSR--------HYKYVCEKK 210

Query: 552 EGGLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLR 731
           EGGL++            SEEEIE+LR+YGL VG++       V   +++   E+V+ LR
Sbjct: 211 EGGLHACGAACGAILGGASEEEIERLRRYGLCVGVMIAFS-NRVEEGNEMETTEVVKELR 269

Query: 732 SLAFKELESFKEANVETIS 788
           SLA KELE F E   E IS
Sbjct: 270 SLALKELEFFHEGKAEAIS 288


>gb|ACQ90681.1| geranyl diphosphate synthase small subunit [Humulus lupulus]
          Length = 279

 Score =  218 bits (556), Expect = 2e-54
 Identities = 120/263 (45%), Positives = 165/263 (62%), Gaps = 1/263 (0%)
 Frame = +3

Query: 27  TINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQREQXXXXX 206
           +I  D+++HL+++I L+ PLSV EPM++LVFSAP N AP+LC+AACELVGG R +     
Sbjct: 21  SITADIEAHLKQSITLKPPLSVHEPMYNLVFSAPPNSAPSLCVAACELVGGHRSKAIAAA 80

Query: 207 XXXXXXXXXXFTHEHLPLTDRPKTKSKPTAHHAFSANIELLTGDGILPFGFELLARSDDP 386
                     FTHEHLPLTD P     P  H+++  +I+LL  D ILP GFELLA+S +P
Sbjct: 81  SALRLLHAANFTHEHLPLTDSPSPS--PVIHNSYDPSIQLLMPDAILPLGFELLAQSYNP 138

Query: 387 TGNNSDKILRVILEITRAMGSQGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEGGLY 566
             NNSD++LRVI+E  RA GS+G+LDGQY Q + + S G E+     +D   ++KEG ++
Sbjct: 139 AQNNSDRVLRVIVEFARAFGSKGILDGQYRQRVVSISNGDEVDNAERVDCSGREKEGKMH 198

Query: 567 SXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMML-YGVGREDKVGLLEMVERLRSLAF 743
           +            +EEE EKLR +GLYVGMI G  + +   RE++      ++ LR+LA 
Sbjct: 199 ACAAACGAILGDANEEETEKLRTFGLYVGMIQGYSIKFMREREEEKEAERTIKELRNLAL 258

Query: 744 KELESFKEANVETISSIVDTSYC 812
           KELE F    +E ISS +   YC
Sbjct: 259 KELEHFHGRKLEPISSFI---YC 278


>emb|CAN63418.1| hypothetical protein VITISV_007690 [Vitis vinifera]
          Length = 298

 Score =  218 bits (556), Expect = 2e-54
 Identities = 122/268 (45%), Positives = 160/268 (59%), Gaps = 2/268 (0%)
 Frame = +3

Query: 3   AQ*DWFWTTINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQ 182
           AQ   +W +IN D+D+HL R I +R P SVF+PMHHL F+AP   APALCIAACEL GG+
Sbjct: 35  AQKSSYWNSINDDIDAHLRRVITIREPFSVFKPMHHLTFAAPETTAPALCIAACELFGGR 94

Query: 183 REQXXXXXXXXXXXXXXXFTHEHLPLTDRPKTKSKPTAHHAFSANIELLTGDGILPFGFE 362
           RE                + HEH+PLTD+ +  S P     F  NIELLTGDG++PFG E
Sbjct: 95  RELAIAAASALHLMHAASYFHEHIPLTDQTRPNSPPRPGPTFGPNIELLTGDGMIPFGLE 154

Query: 363 LLARSD--DPTGNNSDKILRVILEITRAMGSQGMLDGQYIQMLCTRSEGGELCQEGWMDQ 536
           LLA+S+  D    +SD+IL+VI+E+TR +GSQG+++GQYIQ  C  S    + + G    
Sbjct: 155 LLAKSNNLDDDDEHSDRILQVIIELTRXIGSQGVVNGQYIQAQCDES-SPSVGKAGSTRI 213

Query: 537 VYKKKEGGLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEM 716
           V  KK   L++             E+EIEKLRKYG Y G I  M       +++    E+
Sbjct: 214 VTDKKGTELHACGAACGAILGGGKEKEIEKLRKYGFYAGTIQKMSKLEEVEKNR----EV 269

Query: 717 VERLRSLAFKELESFKEANVETISSIVD 800
           +E +R LA KELE F E  VE ISS ++
Sbjct: 270 IEEMRRLALKELEYFDEEKVEPISSFIN 297


>gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I [Salvia
           miltiorrhiza]
          Length = 314

 Score =  210 bits (535), Expect = 5e-52
 Identities = 116/274 (42%), Positives = 167/274 (60%), Gaps = 4/274 (1%)
 Frame = +3

Query: 3   AQ*DWFWTTINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQ 182
           AQ   +W  I  D+D++L+++I +R+P +VFEPMHHL F+APR  A A+C+AACELVGG+
Sbjct: 45  AQNHSYWAAIEADIDTYLKKSIAIRSPETVFEPMHHLTFAAPRTAASAICVAACELVGGE 104

Query: 183 REQXXXXXXXXXXXXXXXFTHEHLPLTDRPKTKSKPTAHHAFSANIELLTGDGILPFGFE 362
           R Q               + HEHLPLTDRP+  SKP   H +  NIELLTGDG+  FGFE
Sbjct: 105 RSQAIATASAIHIMHAAAYAHEHLPLTDRPRPNSKPAIQHKYGPNIELLTGDGMASFGFE 164

Query: 363 LLA---RSDDPTGNNSDKILRVILEITRAMGSQGMLDGQYIQMLCTRSEGGELCQEGWMD 533
           LLA   RSD P   N ++ILRVI+EI+RA GS+G++DG Y +    +    +  +  +++
Sbjct: 165 LLAGSIRSDHP---NPERILRVIIEISRASGSEGIIDGFYRE----KEIVDQHSRFDFIE 217

Query: 534 QVYKKKEGGLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLE 713
            + +KK G +++            +EEEI+KLR +G Y G + G++   +   D   +  
Sbjct: 218 YLCRKKYGEMHACAAASGAILAGGAEEEIQKLRNFGHYAGTLIGLLHKKI---DTPQIQN 274

Query: 714 MVERLRSLAFKELESFKEANVETISSIV-DTSYC 812
           ++ +L+ LA KELE F   NVE + S+V D S C
Sbjct: 275 VIGKLKDLALKELEGFHGKNVELLCSLVADASLC 308


>gb|EXB38722.1| Heterodimeric geranylgeranyl pyrophosphate synthase small subunit
           [Morus notabilis]
          Length = 306

 Score =  210 bits (534), Expect = 7e-52
 Identities = 120/263 (45%), Positives = 165/263 (62%), Gaps = 3/263 (1%)
 Frame = +3

Query: 18  FWTTINTDLDSHLERAIPLRAPLSVFEPMHHLVFSAPRNMAPALCIAACELVGGQREQXX 197
           +  +I  ++++HL++AIPL+ PL+VFEPMHH+ FSAP N APALC+AACEL+GG R Q  
Sbjct: 45  YCASITAEIEAHLKQAIPLKPPLTVFEPMHHMTFSAPLNSAPALCVAACELIGGSRSQAM 104

Query: 198 XXXXXXXXXXXXXFTHEHLPLTDRPKTKSKPTAHHAFSAN---IELLTGDGILPFGFELL 368
                         THE L + +R K K KP A    SAN    +L+  D ++PFG+ELL
Sbjct: 105 AAASALYLMLAASVTHEKLHIPNRLKPKPKP-APGVCSANGPMFDLMFLDAMVPFGYELL 163

Query: 369 ARSDDPTGNNSDKILRVILEITRAMGSQGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKK 548
           A SDDP  + S ++LRVI+E+ RAMGSQG++  QY  ++ ++ +GG       +D + +K
Sbjct: 164 AISDDPDQDTSGRVLRVIVELARAMGSQGIIHAQYQGVIVSQLDGGGSNNIELIDDMCRK 223

Query: 549 KEGGLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERL 728
           KEG +++            +EEEIEKLRKYGLYVG+I G     +GR  KV  +E V  L
Sbjct: 224 KEGRVHACAAACGAILGGANEEEIEKLRKYGLYVGIIQG-YTNRLGR--KVKEIERVVEL 280

Query: 729 RSLAFKELESFKEANVETISSIV 797
           R+LA KEL+ FK   VE ISS +
Sbjct: 281 RNLALKELDHFKGQKVEEISSFI 303