BLASTX nr result
ID: Akebia27_contig00034874
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00034874
(590 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_908761.1| 130 kDa replicase [Cucumber mottle virus] gi|11... 57 5e-06
ref|YP_908760.1| 188 kDa replicase [Cucumber mottle virus] gi|11... 57 5e-06
ref|YP_008802585.1| 129k replicase protein [Yellow tailflower mi... 56 6e-06
ref|YP_008802584.1| 183k replicase [Yellow tailflower mild mottl... 56 6e-06
ref|NP_062914.1| 126 kDa protein [Tobacco mild green mosaic viru... 56 6e-06
ref|NP_062913.2| 183 kDa protein [Tobacco mild green mosaic viru... 56 6e-06
gb|ABO64418.1| p183 kDa protein [Tobacco mild green mosaic virus] 56 6e-06
gb|ABO64417.1| p126 kDa protein [Tobacco mild green mosaic virus] 56 6e-06
ref|NP_620753.1| viral replicase p1 [Tulare apple mosaic virus] ... 56 8e-06
>ref|YP_908761.1| 130 kDa replicase [Cucumber mottle virus]
gi|118562370|dbj|BAF37645.1| 130 kDa replicase [Cucumber
mottle virus]
Length = 1166
Score = 56.6 bits (135), Expect = 5e-06
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Frame = +2
Query: 101 LLVYTQSCKADLVKQGVSNVLTVGEAQGKTYDEVILFRDSSLPKANYT-NSFQTLVALTR 277
++ +TQS K L K G ++V TV E QG+T+DEV L R ++ P T S LVALTR
Sbjct: 1067 IVTFTQSDKFTLEKAGYTDVNTVHEIQGETFDEVSLVRATATPIGLITRKSPHVLVALTR 1126
Query: 278 HRKRFTY--VTVD---TVLNDRSG 334
H K TY VTVD T++++ +G
Sbjct: 1127 HTKTLTYYTVTVDCICTIVDELNG 1150
>ref|YP_908760.1| 188 kDa replicase [Cucumber mottle virus]
gi|118562369|dbj|BAF37644.1| 188 kDa replicase [Cucumber
mottle virus]
Length = 1672
Score = 56.6 bits (135), Expect = 5e-06
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Frame = +2
Query: 101 LLVYTQSCKADLVKQGVSNVLTVGEAQGKTYDEVILFRDSSLPKANYT-NSFQTLVALTR 277
++ +TQS K L K G ++V TV E QG+T+DEV L R ++ P T S LVALTR
Sbjct: 1067 IVTFTQSDKFTLEKAGYTDVNTVHEIQGETFDEVSLVRATATPIGLITRKSPHVLVALTR 1126
Query: 278 HRKRFTY--VTVD---TVLNDRSG 334
H K TY VTVD T++++ +G
Sbjct: 1127 HTKTLTYYTVTVDCICTIVDELNG 1150
>ref|YP_008802585.1| 129k replicase protein [Yellow tailflower mild mottle virus]
gi|556571615|gb|AGZ63346.1| 129k replicase protein
[Yellow tailflower mild mottle virus]
gi|556571620|gb|AGZ63350.1| 129k replicase protein
[Yellow tailflower mild mottle virus]
Length = 1119
Score = 56.2 bits (134), Expect = 6e-06
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +2
Query: 80 SKKRSVPLLVYTQSCKADLVKQGVSNVLTVGEAQGKTYDEVILFRDSSLPKANYT-NSFQ 256
SK ++ +TQS K+ LV +G NV TV E QG+TY+EV L R + P + +S
Sbjct: 1013 SKPLKGKVITFTQSDKSTLVARGYENVNTVHEIQGETYEEVSLVRLTPTPIGIISRDSPH 1072
Query: 257 TLVALTRHRKRFTYVTV 307
LVAL+RH K F Y TV
Sbjct: 1073 VLVALSRHTKAFKYYTV 1089
>ref|YP_008802584.1| 183k replicase [Yellow tailflower mild mottle virus]
gi|556571614|gb|AGZ63345.1| 183k replicase [Yellow
tailflower mild mottle virus] gi|556571619|gb|AGZ63349.1|
183k replicase [Yellow tailflower mild mottle virus]
Length = 1614
Score = 56.2 bits (134), Expect = 6e-06
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +2
Query: 80 SKKRSVPLLVYTQSCKADLVKQGVSNVLTVGEAQGKTYDEVILFRDSSLPKANYT-NSFQ 256
SK ++ +TQS K+ LV +G NV TV E QG+TY+EV L R + P + +S
Sbjct: 1013 SKPLKGKVITFTQSDKSTLVARGYENVNTVHEIQGETYEEVSLVRLTPTPIGIISRDSPH 1072
Query: 257 TLVALTRHRKRFTYVTV 307
LVAL+RH K F Y TV
Sbjct: 1073 VLVALSRHTKAFKYYTV 1089
>ref|NP_062914.1| 126 kDa protein [Tobacco mild green mosaic virus]
gi|335245|gb|AAA47935.1| 126 kDa protein [Tobacco mild
green mosaic virus]
Length = 1111
Score = 56.2 bits (134), Expect = 6e-06
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Frame = +2
Query: 2 EFQMTTHNPILRSLHGPVQFVSGMFQSKKRSVP--LLVYTQSCKADLVKQGVSNVLTVGE 175
E +TT + + RS+ + G+ S + + ++ +TQ+ K +L ++G NV TV E
Sbjct: 977 EGAVTTTSTVQRSVSSEMIGGKGVLNSVSKPLKGKIVTFTQADKFELEEKGYKNVNTVHE 1036
Query: 176 AQGKTYDEVILFRDSSLPKANYTNSF-QTLVALTRHRKRFTYVTV 307
QG+T+++V L R ++ P + S LVALTRH K F Y TV
Sbjct: 1037 IQGETFEDVSLVRLTATPLTLISKSSPHVLVALTRHTKSFKYYTV 1081
>ref|NP_062913.2| 183 kDa protein [Tobacco mild green mosaic virus]
gi|12644147|sp|P18339.2|RDRP_TMGMV RecName:
Full=Replicase large subunit; AltName: Full=183 kDa
protein; AltName: Full=RNA-directed RNA polymerase;
Contains: RecName: Full=Replicase small subunit; AltName:
Full=126 kDa protein; AltName: Full=Methyltransferase/RNA
helicase; Short=MT/HEL gi|383215012|gb|AAA47934.2| 183
kDa protein [Tobacco mild green mosaic virus]
Length = 1609
Score = 56.2 bits (134), Expect = 6e-06
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Frame = +2
Query: 2 EFQMTTHNPILRSLHGPVQFVSGMFQSKKRSVP--LLVYTQSCKADLVKQGVSNVLTVGE 175
E +TT + + RS+ + G+ S + + ++ +TQ+ K +L ++G NV TV E
Sbjct: 977 EGAVTTTSTVQRSVSSEMIGGKGVLNSVSKPLKGKIVTFTQADKFELEEKGYKNVNTVHE 1036
Query: 176 AQGKTYDEVILFRDSSLPKANYTNSF-QTLVALTRHRKRFTYVTV 307
QG+T+++V L R ++ P + S LVALTRH K F Y TV
Sbjct: 1037 IQGETFEDVSLVRLTATPLTLISKSSPHVLVALTRHTKSFKYYTV 1081
>gb|ABO64418.1| p183 kDa protein [Tobacco mild green mosaic virus]
Length = 1609
Score = 56.2 bits (134), Expect = 6e-06
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Frame = +2
Query: 2 EFQMTTHNPILRSLHGPVQFVSGMFQSKKRSVP--LLVYTQSCKADLVKQGVSNVLTVGE 175
E +TT + + RS+ + G+ S + + ++ +TQ+ K +L ++G NV TV E
Sbjct: 977 EGAVTTTSTVQRSVSSEMIGGKGVLNSVSKPLKGKIVTFTQADKFELEEKGYKNVNTVHE 1036
Query: 176 AQGKTYDEVILFRDSSLPKANYTNSF-QTLVALTRHRKRFTYVTV 307
QG+T+++V L R ++ P + S LVALTRH K F Y TV
Sbjct: 1037 IQGETFEDVSLVRLTATPLTLISKSSPHVLVALTRHTKSFKYYTV 1081
>gb|ABO64417.1| p126 kDa protein [Tobacco mild green mosaic virus]
Length = 1111
Score = 56.2 bits (134), Expect = 6e-06
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Frame = +2
Query: 2 EFQMTTHNPILRSLHGPVQFVSGMFQSKKRSVP--LLVYTQSCKADLVKQGVSNVLTVGE 175
E +TT + + RS+ + G+ S + + ++ +TQ+ K +L ++G NV TV E
Sbjct: 977 EGAVTTTSTVQRSVSSEMIGGKGVLNSVSKPLKGKIVTFTQADKFELEEKGYKNVNTVHE 1036
Query: 176 AQGKTYDEVILFRDSSLPKANYTNSF-QTLVALTRHRKRFTYVTV 307
QG+T+++V L R ++ P + S LVALTRH K F Y TV
Sbjct: 1037 IQGETFEDVSLVRLTATPLTLISKSSPHVLVALTRHTKSFKYYTV 1081
>ref|NP_620753.1| viral replicase p1 [Tulare apple mosaic virus]
gi|12698356|gb|AAK01481.1|AF226160_1 viral replicase p1
[Tulare apple mosaic virus]
Length = 1060
Score = 55.8 bits (133), Expect = 8e-06
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Frame = +2
Query: 8 QMTTHNPILRSLHGPVQFVSGMFQSKKRSVPLLVYTQSCKADLVKQ---GVSNVLTVGEA 178
++ T NPI SL + SGM +R +++TQ+ K +++ +NV+T EA
Sbjct: 922 KVKTFNPISSSL-SLININSGMEIPAERDTLYIMHTQADKCAMLRHPGINANNVMTTHEA 980
Query: 179 QGKTYDEVILFRDSSLPKANYTNSF------QTLVALTRHRKRFTYVTV 307
QGKT+D VIL R S Y+ LVAL+RHRK Y +V
Sbjct: 981 QGKTFDNVILVRLSKTTNLLYSGKMPDAGPSHNLVALSRHRKTLRYYSV 1029