BLASTX nr result
ID: Akebia27_contig00034788
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia27_contig00034788 (442 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_007051013.1| RNA helicase family protein, putative [Theob... 69 7e-10 ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica... 66 6e-09 ref|XP_007009967.1| RNA helicase family protein [Theobroma cacao... 63 5e-08 ref|XP_002302733.2| hypothetical protein POPTR_0002s20250g [Popu... 58 2e-06 ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA h... 55 8e-06 >ref|XP_007051013.1| RNA helicase family protein, putative [Theobroma cacao] gi|508703274|gb|EOX95170.1| RNA helicase family protein, putative [Theobroma cacao] Length = 1264 Score = 68.9 bits (167), Expect = 7e-10 Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 2/82 (2%) Frame = -3 Query: 440 REKRRRAVQFSKIGLEMPQDDRPSKKRDKEGLSDQS--GSDLDEVYLKQECSENDSLQVM 267 REKRRRAVQF K GLE+P D+ SK RD + LS S +L+E+ +++ S+N Q + Sbjct: 109 REKRRRAVQFLKAGLELPYVDQSSKGRDGDNLSSSSEPEPELEEINSRKDISKNHIRQPL 168 Query: 266 VVEREDRNNDCGPLDTYQEPTF 201 ++E E N GPL + QEP F Sbjct: 169 IIEIEVARNALGPLASSQEPVF 190 >ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis vinifera] Length = 1414 Score = 65.9 bits (159), Expect = 6e-09 Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 3/130 (2%) Frame = -3 Query: 437 EKRRRAVQFSKIGLEMPQDDRPSKKRDKEGLSDQSGSDLDEVYLKQECSENDSLQVMVVE 258 EKRRRAV+FSK GLEMP DRP K +D E D +++ KQE E+D++ +V+ Sbjct: 189 EKRRRAVRFSKAGLEMPHSDRPFKSQDGE-----MEPDSNKIQSKQEFDESDAMWPRMVQ 243 Query: 257 REDRNNDCGPLDTYQEPTFSSVMDTNEGSHSALPAYKSSVSHME---EDQKIPLLIPCDY 87 RE +N L E S+ + N LPA + S + + +D++ Sbjct: 244 REVLSNASISLGFTSELVCSTELAVNSRHSPTLPAKEVSEKNYDTSMQDRRNSTPTSTTA 303 Query: 86 EGIKNTKSQD 57 +G KN KS+D Sbjct: 304 DGQKNIKSKD 313 >ref|XP_007009967.1| RNA helicase family protein [Theobroma cacao] gi|508726880|gb|EOY18777.1| RNA helicase family protein [Theobroma cacao] Length = 1389 Score = 62.8 bits (151), Expect = 5e-08 Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 8/117 (6%) Frame = -3 Query: 440 REKRRRAVQFSKIGLEMPQDDRPSKKRDKEGLSDQS----GSDLDEVYLKQECSENDSLQ 273 REKRRR VQFSK GLE P D+ SK R S S +L+E+ ++ ++ Q Sbjct: 179 REKRRRVVQFSKAGLEPPYVDKSSKGRGGNNSSSSSEPEPEPELEEINSRKLSTDG---Q 235 Query: 272 VMVVEREDRNNDCGPLDTYQEPTFSSVMDTNEGSHSALP----AYKSSVSHMEEDQK 114 +++ERE N+ G L + QEP F +D + S LP + K + + +EED K Sbjct: 236 PLIIEREVARNELGRLASSQEPVFGKDLDPSCSSVDTLPTKEVSLKENSTPLEEDIK 292 >ref|XP_002302733.2| hypothetical protein POPTR_0002s20250g [Populus trichocarpa] gi|550345446|gb|EEE82006.2| hypothetical protein POPTR_0002s20250g [Populus trichocarpa] Length = 1198 Score = 57.8 bits (138), Expect = 2e-06 Identities = 40/96 (41%), Positives = 55/96 (57%) Frame = -3 Query: 440 REKRRRAVQFSKIGLEMPQDDRPSKKRDKEGLSDQSGSDLDEVYLKQECSENDSLQVMVV 261 +EKRR AVQFSK GL PQ D+P K R+ E S + + LDE+ K++ +E LQ MV+ Sbjct: 64 KEKRRMAVQFSKAGLS-PQGDQPFK-RNHETASFEIEAGLDEIQSKKDMNEKGHLQPMVI 121 Query: 260 EREDRNNDCGPLDTYQEPTFSSVMDTNEGSHSALPA 153 RE +N+ L Y +P + + N S SA A Sbjct: 122 GREVQNHASFSL-VYHDPVSGNELGLNGRSVSAFSA 156 >ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago truncatula] gi|355506130|gb|AES87272.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago truncatula] Length = 1331 Score = 55.5 bits (132), Expect = 8e-06 Identities = 41/134 (30%), Positives = 64/134 (47%) Frame = -3 Query: 440 REKRRRAVQFSKIGLEMPQDDRPSKKRDKEGLSDQSGSDLDEVYLKQECSENDSLQVMVV 261 +EKRR+AV K GL++P DD SKK+D S+ ++ V +K E END +Q Sbjct: 102 KEKRRKAVHLLKEGLDVPHDDDLSKKQDIACTSESEEEEIHTVQVK-EFEENDVIQPFRT 160 Query: 260 EREDRNNDCGPLDTYQEPTFSSVMDTNEGSHSALPAYKSSVSHMEEDQKIPLLIPCDYEG 81 E+E PL++ QEP + + E A P S ++ + + Sbjct: 161 EKEILYTTTVPLESTQEPVHRNEVINYE--TVAEPVADVSTDKQPDEIRSSSPTSRSIDD 218 Query: 80 IKNTKSQDKEVAGP 39 IK+T S+D++ P Sbjct: 219 IKSTNSKDRKNENP 232