BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00034023
         (599 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35966.3| unnamed protein product [Vitis vinifera]              315   8e-84
emb|CAN68531.1| hypothetical protein VITISV_011920 [Vitis vinifera]   222   7e-56
ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containi...   213   3e-53
ref|XP_007205016.1| hypothetical protein PRUPE_ppa003703mg [Prun...   213   4e-53
ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containi...   211   1e-52
emb|CBI38215.3| unnamed protein product [Vitis vinifera]              211   2e-52
ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containi...   211   2e-52
ref|XP_007199750.1| hypothetical protein PRUPE_ppa002774mg [Prun...   209   5e-52
gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]        209   6e-52
ref|XP_007014360.1| Pentatricopeptide repeat superfamily protein...   208   1e-51
ref|XP_007014358.1| Pentatricopeptide repeat superfamily protein...   208   1e-51
ref|XP_007014357.1| Pentatricopeptide repeat superfamily protein...   208   1e-51
ref|XP_007207552.1| hypothetical protein PRUPE_ppa017672mg [Prun...   207   2e-51
ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [S...   207   2e-51
ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi...   207   2e-51
gb|EMT27117.1| hypothetical protein F775_08942 [Aegilops tauschii]    206   4e-51
ref|XP_007020019.1| Pentatricopeptide repeat (PPR) superfamily p...   206   5e-51
ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containi...   205   9e-51
ref|XP_002318172.1| pentatricopeptide repeat-containing family p...   205   9e-51
ref|XP_006443657.1| hypothetical protein CICLE_v10019256mg [Citr...   204   1e-50

>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  315 bits (806), Expect = 8e-84
 Identities = 154/199 (77%), Positives = 176/199 (88%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           KCGDVEKA  +FD +SCKNL SWNA+ITG VQ G+LEEAI L+  M+A+SV+PNEIT+VN
Sbjct: 275 KCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVN 334

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VLSACAGLGAL+LGREVHLYLGRNGLDLNVILAT+LVDMY+KCG IDDACL+FVK + KD
Sbjct: 335 VLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKD 394

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFS 541
           VA  NAMILGLA+HG+GRDSLA+ +QM + G  PND+TFIGVLSACNHS LVEEGRVQFS
Sbjct: 395 VALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFS 454

Query: 542 NMVMKWGLSPKVEHYACMV 598
           +M  K GLSPK+EHYACMV
Sbjct: 455 SMADKHGLSPKLEHYACMV 473



 Score =  127 bits (319), Expect = 2e-27
 Identities = 72/177 (40%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
 Frame = +2

Query: 8   GDVEKARTLFDEMSCK-NLVSWNAMITGYVQRGMLEEAIQLF--YLMQAKSVRPNEITMV 178
           G VEKAR LF+EM  + N+V W AMI GY + G   E + LF   L+ A  V+PN  TMV
Sbjct: 173 GQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMV 232

Query: 179 NVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANK 358
            +LSAC+ L   ++GR + +++  N + LN IL T+L+DMYSKCG ++ A  +F  ++ K
Sbjct: 233 CLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCK 292

Query: 359 DVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGR 529
           ++   NA+I G    G   +++ +   M+     PN+IT + VLSAC     +E GR
Sbjct: 293 NLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGR 349



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 34/206 (16%)
 Frame = +2

Query: 14  VEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVNVLSA 193
           ++ AR + D+       SWN++I  Y   G  + ++ L+  M   S +P+  T   VL A
Sbjct: 43  IDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKA 102

Query: 194 CAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKC--------------------- 310
           C+ LG++  G ++H ++ R G   ++ +  SL+DMY KC                     
Sbjct: 103 CSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSW 162

Query: 311 ----------GSIDDACLVFVKM-ANKDVAFCNAMILGLAHHGNGRDSLAILTQM--EKN 451
                     G ++ A  +F +M   ++V    AMI G    G+  + L++  QM    +
Sbjct: 163 NSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSAD 222

Query: 452 GTDPNDITFIGVLSACNHSRLVEEGR 529
              PN  T + +LSAC+     E GR
Sbjct: 223 EVQPNAATMVCLLSACSTLCNYEVGR 248


>emb|CAN68531.1| hypothetical protein VITISV_011920 [Vitis vinifera]
          Length = 435

 Score =  222 bits (565), Expect = 7e-56
 Identities = 121/199 (60%), Positives = 142/199 (71%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           KCGDVEKA  +FD +SCK L SWNA I+ Y Q G+LEEAI L+ LM+A+S + NEI    
Sbjct: 185 KCGDVEKAWRIFDGVSCKKLPSWNAXISEYAQCGLLEEAIDLYCLMKAQSXKXNEIM--- 241

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
                  LG   LG +    L  NGL+LNVILAT+LVD+Y+KCG IDDACLVFVK + KD
Sbjct: 242 -------LGHWNLGEKFICTL--NGLELNVILATTLVDVYAKCGKIDDACLVFVKTSEKD 292

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFS 541
           VA  NAMILGLA+HG+          ME+ G  PND+TFIGVLSACNHS LVEEGRVQFS
Sbjct: 293 VALWNAMILGLAYHGD----------MERTGVQPNDVTFIGVLSACNHSGLVEEGRVQFS 342

Query: 542 NMVMKWGLSPKVEHYACMV 598
           +M  K GLSPK+EH ACM+
Sbjct: 343 SMADKHGLSPKLEHCACML 361


>ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  213 bits (543), Expect = 3e-53
 Identities = 106/201 (52%), Positives = 138/201 (68%), Gaps = 2/201 (0%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           KCGD+  AR +FD M  K+ V+WNAMITGY Q GM EEAI+LF  M+  S  P++IT++ 
Sbjct: 275 KCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIG 334

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           +LSACA +GAL LG++V +Y    G   +V + T+LVDMY+KCGS+D+A  VF  M NK+
Sbjct: 335 ILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKN 394

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNG--TDPNDITFIGVLSACNHSRLVEEGRVQ 535
               NAMI  LA HG  +++LA+   M   G    PNDITF+GVLSAC H+ LV+EGR  
Sbjct: 395 EVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRL 454

Query: 536 FSNMVMKWGLSPKVEHYACMV 598
           F  M   +GL PK+EHY+CMV
Sbjct: 455 FHMMSSSFGLVPKIEHYSCMV 475



 Score =  137 bits (346), Expect = 2e-30
 Identities = 70/166 (42%), Positives = 101/166 (60%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           +CG +  AR +FDE+S K+LVSWN+MI+GY +     EA+ LF  M     +PNE+++V+
Sbjct: 174 RCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVS 233

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VL AC  LG LKLG  V  ++  N + LN  + ++L+ MY KCG +  A  +F  M  KD
Sbjct: 234 VLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKD 293

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSAC 499
               NAMI G A +G   +++ +   M  + T P+ IT IG+LSAC
Sbjct: 294 KVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSAC 339



 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 1/164 (0%)
 Frame = +2

Query: 11  DVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEE-AIQLFYLMQAKSVRPNEITMVNVL 187
           D   A   F  +      S+N MI G          A++ +  M+   ++PN +T   + 
Sbjct: 75  DFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLF 134

Query: 188 SACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDVA 367
            AC+ L A++ GR  H  + R GLD +  ++ SL+ MY++CG + DA  VF +++ KD+ 
Sbjct: 135 IACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLV 194

Query: 368 FCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSAC 499
             N+MI G +   +  +++ +  +M + G  PN+++ + VL AC
Sbjct: 195 SWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGAC 238



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLM--QAKSVRPNEITM 175
           KCG ++ A  +F  M  KN VSWNAMI+     G  +EA+ LF  M  +  +V PN+IT 
Sbjct: 376 KCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITF 435

Query: 176 VNVLSACAGLGALKLGREV-HLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMA 352
           V VLSAC   G +  GR + H+     GL   +   + +VD++S+ G +++A    + M 
Sbjct: 436 VGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMP 495

Query: 353 NKDVAFCNAMILG 391
            K        +LG
Sbjct: 496 EKPDEVILGALLG 508


>ref|XP_007205016.1| hypothetical protein PRUPE_ppa003703mg [Prunus persica]
           gi|462400658|gb|EMJ06215.1| hypothetical protein
           PRUPE_ppa003703mg [Prunus persica]
          Length = 555

 Score =  213 bits (541), Expect = 4e-53
 Identities = 103/199 (51%), Positives = 140/199 (70%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           K G+VE+AR LFD M  +++V WN MI GY Q GM  EA+ LF  M    ++PNE+T+++
Sbjct: 129 KRGEVEEARVLFDGMEERDVVCWNVMIDGYAQHGMPNEALLLFRKMLVAKIKPNELTVLS 188

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           +LSAC  LGAL+ GR +H Y+  NG+ +N  + T+L+DMYSKCGS++DACLVF  +  KD
Sbjct: 189 LLSACGQLGALESGRWLHSYIENNGIQVNTHVGTALIDMYSKCGSLEDACLVFDMIDEKD 248

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFS 541
           V   N+MI+G A HG  RD+L +  +M +    P DITFIGVLSAC ++ LV EGR  FS
Sbjct: 249 VVAWNSMIVGYAMHGFSRDALQLFHEMCRLSCQPTDITFIGVLSACAYAGLVSEGRAFFS 308

Query: 542 NMVMKWGLSPKVEHYACMV 598
           +M  ++G+ PK+EHY CMV
Sbjct: 309 SMKDEYGIEPKIEHYGCMV 327



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/88 (31%), Positives = 50/88 (56%)
 Frame = +2

Query: 266 NVILATSLVDMYSKCGSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQME 445
           +++  T+++  Y+K G +++A ++F  M  +DV   N MI G A HG   ++L +  +M 
Sbjct: 116 SLVSLTAMITCYAKRGEVEEARVLFDGMEERDVVCWNVMIDGYAQHGMPNEALLLFRKML 175

Query: 446 KNGTDPNDITFIGVLSACNHSRLVEEGR 529
                PN++T + +LSAC     +E GR
Sbjct: 176 VAKIKPNELTVLSLLSACGQLGALESGR 203


>ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  211 bits (537), Expect = 1e-52
 Identities = 105/201 (52%), Positives = 137/201 (68%), Gaps = 2/201 (0%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           KCGD+  AR +FD M  K+ V+WNAMITGY Q GM EEAI+LF  M+  S  P++IT++ 
Sbjct: 275 KCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIG 334

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           +LSACA +GAL LG++V +Y    G   +V + T+LVDMY+KCGS+D+A  VF  M  K+
Sbjct: 335 ILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKN 394

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNG--TDPNDITFIGVLSACNHSRLVEEGRVQ 535
               NAMI  LA HG  +++LA+   M   G    PNDITF+GVLSAC H+ LV+EGR  
Sbjct: 395 EVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRL 454

Query: 536 FSNMVMKWGLSPKVEHYACMV 598
           F  M   +GL PK+EHY+CMV
Sbjct: 455 FHMMSSSFGLVPKIEHYSCMV 475



 Score =  137 bits (346), Expect = 2e-30
 Identities = 70/166 (42%), Positives = 101/166 (60%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           +CG +  AR +FDE+S K+LVSWN+MI+GY +     EA+ LF  M     +PNE+++V+
Sbjct: 174 RCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVS 233

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VL AC  LG LKLG  V  ++  N + LN  + ++L+ MY KCG +  A  +F  M  KD
Sbjct: 234 VLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKD 293

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSAC 499
               NAMI G A +G   +++ +   M  + T P+ IT IG+LSAC
Sbjct: 294 KVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSAC 339



 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 1/164 (0%)
 Frame = +2

Query: 11  DVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEE-AIQLFYLMQAKSVRPNEITMVNVL 187
           D   A   F  +      S+N MI G          A++ +  M+   ++PN +T   + 
Sbjct: 75  DFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLF 134

Query: 188 SACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDVA 367
            AC+ L A++ GR  H  + R GLD +  ++ SL+ MY++CG + DA  VF +++ KD+ 
Sbjct: 135 IACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLV 194

Query: 368 FCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSAC 499
             N+MI G +   +  +++ +  +M + G  PN+++ + VL AC
Sbjct: 195 SWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGAC 238



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLM--QAKSVRPNEITM 175
           KCG ++ A  +F  M  KN VSWNAMI+     G  +EA+ LF  M  +  +V PN+IT 
Sbjct: 376 KCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITF 435

Query: 176 VNVLSACAGLGALKLGREV-HLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMA 352
           V VLSAC   G +  GR + H+     GL   +   + +VD++S+ G +++A    + M 
Sbjct: 436 VGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMP 495

Query: 353 NKDVAFCNAMILG 391
            K        +LG
Sbjct: 496 EKPDEVILGALLG 508


>emb|CBI38215.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  211 bits (536), Expect = 2e-52
 Identities = 100/199 (50%), Positives = 139/199 (69%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           KCGD   AR +F EM  KN+VSWN+MI+G  Q+G  +E++ +F  MQ   V+P+++T+V 
Sbjct: 252 KCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVA 311

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VL++CA LG L+LG+ VH YL RN +  +  +  +LVDMY+KCGSID AC VF  M  KD
Sbjct: 312 VLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKD 371

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFS 541
           V    AMI+GLA HG G  +L + ++M K G +P+++TF+GVL+AC+H  LVEEGR  F 
Sbjct: 372 VYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFE 431

Query: 542 NMVMKWGLSPKVEHYACMV 598
           +M   + L P++EHY CMV
Sbjct: 432 DMSTIYNLRPQLEHYGCMV 450



 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 52/175 (29%), Positives = 85/175 (48%)
 Frame = +2

Query: 5   CGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVNV 184
           C  +  AR +FD    ++LVSW  MI GYV+ G   E + L+ +  +             
Sbjct: 188 CDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLYIIRNSN------------ 235

Query: 185 LSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDV 364
                                   ++L+V +  +LVDMY KCG  + A  VF +M  K+V
Sbjct: 236 ------------------------VNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNV 271

Query: 365 AFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGR 529
              N+MI GLA  G  ++SL +  +M++ G  P+D+T + VL++C +  ++E G+
Sbjct: 272 VSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGK 326



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
 Frame = +2

Query: 11  DVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLE-EAIQLFYLMQAKSVRPNEITMVNVL 187
           D   A +L  ++   NL  +NA+I G         E + ++  M +K + P+  T+  VL
Sbjct: 88  DPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVL 147

Query: 188 SACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDVA 367
            ACA   A++ G EVH    + GL  +V ++ +L+ MY+ C  I  A  VF     +D+ 
Sbjct: 148 KACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLV 207

Query: 368 FCNAMILGLAHHGNGRDSLAI 430
               MI G    G  R+ + +
Sbjct: 208 SWTTMIQGYVKMGFAREGVGL 228


>ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 617

 Score =  211 bits (536), Expect = 2e-52
 Identities = 100/199 (50%), Positives = 139/199 (69%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           KCGD   AR +F EM  KN+VSWN+MI+G  Q+G  +E++ +F  MQ   V+P+++T+V 
Sbjct: 274 KCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVA 333

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VL++CA LG L+LG+ VH YL RN +  +  +  +LVDMY+KCGSID AC VF  M  KD
Sbjct: 334 VLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKD 393

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFS 541
           V    AMI+GLA HG G  +L + ++M K G +P+++TF+GVL+AC+H  LVEEGR  F 
Sbjct: 394 VYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFE 453

Query: 542 NMVMKWGLSPKVEHYACMV 598
           +M   + L P++EHY CMV
Sbjct: 454 DMSTIYNLRPQLEHYGCMV 472



 Score =  137 bits (345), Expect = 2e-30
 Identities = 71/176 (40%), Positives = 114/176 (64%), Gaps = 1/176 (0%)
 Frame = +2

Query: 5   CGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVNV 184
           C  +  AR +FD    ++LVSW  MI GYV+ G   E + LF+ M  ++++ + +T+V V
Sbjct: 173 CDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIV 232

Query: 185 LSACAGLGALKLGREVHLYLGRN-GLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           LS+CA LG L+LGR++H Y+ RN  ++L+V +  +LVDMY KCG  + A  VF +M  K+
Sbjct: 233 LSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKN 292

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGR 529
           V   N+MI GLA  G  ++SL +  +M++ G  P+D+T + VL++C +  ++E G+
Sbjct: 293 VVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGK 348



 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
 Frame = +2

Query: 11  DVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLE-EAIQLFYLMQAKSVRPNEITMVNVL 187
           D   A +L  ++   NL  +NA+I G         E + ++  M +K + P+  T+  VL
Sbjct: 73  DPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVL 132

Query: 188 SACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDVA 367
            ACA   A++ G EVH    + GL  +V ++ +L+ MY+ C  I  A  VF     +D+ 
Sbjct: 133 KACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLV 192

Query: 368 FCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSAC 499
               MI G    G  R+ + +  +M       + +T + VLS+C
Sbjct: 193 SWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSC 236


>ref|XP_007199750.1| hypothetical protein PRUPE_ppa002774mg [Prunus persica]
           gi|462395150|gb|EMJ00949.1| hypothetical protein
           PRUPE_ppa002774mg [Prunus persica]
          Length = 635

 Score =  209 bits (532), Expect = 5e-52
 Identities = 102/199 (51%), Positives = 142/199 (71%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           + GDV  AR LFD+M  +++VSWN MI+GY Q G   EAI LF  MQ ++V PN +T+V+
Sbjct: 209 RVGDVRAARVLFDKMPQRSVVSWNVMISGYAQNGFFREAIDLFRDMQIENVYPNYVTLVS 268

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VL A + LGAL+LG+ +HLY G+N ++++ +L ++LVDMYSKCGSI+ A LVF K+  ++
Sbjct: 269 VLPAISRLGALELGKWIHLYAGKNRIEIDDVLGSALVDMYSKCGSIEKALLVFEKLPKRN 328

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFS 541
           V   NA+I GLA HG   D+L    +ME  G  P+D+T+IG+LSAC+H+ LVE+GR  F+
Sbjct: 329 VITWNAIISGLAMHGRVEDALDYFKKMEPAGVVPSDVTYIGILSACSHAGLVEQGRSFFN 388

Query: 542 NMVMKWGLSPKVEHYACMV 598
            MV    L P++EHY CMV
Sbjct: 389 RMVNVISLEPRIEHYGCMV 407



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 61/219 (27%), Positives = 95/219 (43%), Gaps = 46/219 (21%)
 Frame = +2

Query: 11  DVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLE---EAIQLFYLMQAKS-VRPNEITMV 178
           ++E AR +F+ M   N  SWN +I    +  + E   EA+ LF  M +   V PN  T  
Sbjct: 65  NIEWARAVFNHMQRPNCFSWNTIIRALAESSVDEHPLEALLLFSQMVSYGFVGPNRFTFP 124

Query: 179 NVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFV----- 343
           +VL ACA +G L +G+ VH  + + GLD +  + ++LV MY  C  ++DA L+F      
Sbjct: 125 SVLKACAKMGNLGVGKCVHGMVVKFGLDTDEFVVSNLVRMYVMCKVMEDAHLLFSRSVVV 184

Query: 344 -------------------------------------KMANKDVAFCNAMILGLAHHGNG 412
                                                KM  + V   N MI G A +G  
Sbjct: 185 CGHLNERKQEGNVVLWNVIVDGYVRVGDVRAARVLFDKMPQRSVVSWNVMISGYAQNGFF 244

Query: 413 RDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGR 529
           R+++ +   M+     PN +T + VL A +    +E G+
Sbjct: 245 REAIDLFRDMQIENVYPNYVTLVSVLPAISRLGALELGK 283


>gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  209 bits (531), Expect = 6e-52
 Identities = 103/199 (51%), Positives = 136/199 (68%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           KCG++ KAR LFD M  +++V+W+AMI+GY Q     EA+ LF  MQ   V PN++TMV+
Sbjct: 268 KCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVS 327

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VLSACA LGAL+ G+ VH Y+ R  L L  IL T+LVD Y+KCG IDDA   F  M  K+
Sbjct: 328 VLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKN 387

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFS 541
                A+I G+A +G GR++L + + M + G +P D+TFIGVL AC+HS LVEEGR  F 
Sbjct: 388 SWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFD 447

Query: 542 NMVMKWGLSPKVEHYACMV 598
           +M   +G+ P+VEHY CMV
Sbjct: 448 SMARDYGIKPRVEHYGCMV 466



 Score =  123 bits (309), Expect = 3e-26
 Identities = 65/175 (37%), Positives = 102/175 (58%)
 Frame = +2

Query: 5   CGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVNV 184
           CGDV  AR +FD      +V WNA++  Y++ G   E +++F  M    V  +E+T+V+V
Sbjct: 168 CGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSV 227

Query: 185 LSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDV 364
           ++AC  +G  KLG+ V  ++   GL  N  L T+L+DMY+KCG I  A  +F  M ++DV
Sbjct: 228 VTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDV 287

Query: 365 AFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGR 529
              +AMI G       R++L + ++M+    +PND+T + VLSAC     +E G+
Sbjct: 288 VAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGK 342



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 40/146 (27%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
 Frame = +2

Query: 68  WNAMITGYVQRGMLEEAIQLFY-LMQAKSVRP-NEITMVNVLSACAGLGALKLGREVHLY 241
           +N ++  ++  G  E+A+ LF  ++ A S  P ++ T    L +C+ + AL +GR V  Y
Sbjct: 86  YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145

Query: 242 LGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDS 421
             + GL  +  + +SL+ MY+ CG +  A LVF       V   NA++     +G+  + 
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEV 205

Query: 422 LAILTQMEKNGTDPNDITFIGVLSAC 499
           + +   M + G   +++T + V++AC
Sbjct: 206 VEMFKGMLEVGVAFDEVTLVSVVTAC 231


>ref|XP_007014360.1| Pentatricopeptide repeat superfamily protein isoform 4 [Theobroma
           cacao] gi|590581496|ref|XP_007014363.1|
           Pentatricopeptide repeat superfamily protein isoform 4
           [Theobroma cacao] gi|508784723|gb|EOY31979.1|
           Pentatricopeptide repeat superfamily protein isoform 4
           [Theobroma cacao] gi|508784726|gb|EOY31982.1|
           Pentatricopeptide repeat superfamily protein isoform 4
           [Theobroma cacao]
          Length = 619

 Score =  208 bits (529), Expect = 1e-51
 Identities = 104/201 (51%), Positives = 141/201 (70%), Gaps = 2/201 (0%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           KCGD   AR +FD M  K++V+WNAMITGY Q GM +EAI+LF+ M+   V P++IT+V 
Sbjct: 275 KCGDFVSARGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVG 334

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VLSACA +GAL LG+ +  Y  + GL  N+ ++T+LVDMY+KCGS+D+A  VF  M  K+
Sbjct: 335 VLSACASIGALDLGKRIDTYASQRGLQRNIFVSTALVDMYAKCGSLDNAQRVFENMPVKN 394

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTD--PNDITFIGVLSACNHSRLVEEGRVQ 535
               NAMI  LA HG  +++L++  +M K G D  PND+TF+GVLSAC H+ LV+EG   
Sbjct: 395 EVSWNAMISALAFHGRPQEALSLFERMSKEGRDACPNDVTFVGVLSACVHAGLVDEGWQY 454

Query: 536 FSNMVMKWGLSPKVEHYACMV 598
           F  M   +GL+PK+EH +CMV
Sbjct: 455 FELMNSSYGLTPKIEHCSCMV 475



 Score =  137 bits (344), Expect = 3e-30
 Identities = 72/166 (43%), Positives = 104/166 (62%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           +CG++  AR +FDE+S ++LVSWN+MI+GY + G   EA+ LF  M+ +   P+E+T+V+
Sbjct: 174 RCGELGSARRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGKMREEGFVPDEMTLVS 233

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VL AC  LG L LGR V  +   + + LN  +A++L+ MY KCG    A  VF  M  KD
Sbjct: 234 VLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCGDFVSARGVFDGMEGKD 293

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSAC 499
           V   NAMI G A +G   +++ +   M+  G  P+ IT +GVLSAC
Sbjct: 294 VVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVGVLSAC 339



 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
 Frame = +2

Query: 23  ARTLFDEMSCKNLVSWNAMITGYVQRGM-LEEAIQLFYLMQAKSVRPNEITMVNVLSACA 199
           A  LF ++   N  ++N MI G           +  +Y M+   ++PN+ T   +  ACA
Sbjct: 79  ASLLFSQIPQPNDYAFNVMIRGLTTTWQHYSTTLHFYYQMKFLGLKPNKFTYPFLFIACA 138

Query: 200 GLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDVAFCNA 379
            L  L  G+  H  + R GLD++     SL+ MY++CG +  A  VF +++ +D+   N+
Sbjct: 139 NLLELSHGQAAHSSVFRLGLDVDSHTTHSLITMYARCGELGSARRVFDEISERDLVSWNS 198

Query: 380 MILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSAC 499
           MI G +  G   +++ +  +M + G  P+++T + VL AC
Sbjct: 199 MISGYSKMGYANEAVGLFGKMREEGFVPDEMTLVSVLGAC 238


>ref|XP_007014358.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma
           cacao] gi|590581482|ref|XP_007014359.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao] gi|590581490|ref|XP_007014361.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao] gi|590581493|ref|XP_007014362.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao] gi|508784721|gb|EOY31977.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao] gi|508784722|gb|EOY31978.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao] gi|508784724|gb|EOY31980.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao] gi|508784725|gb|EOY31981.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao]
          Length = 565

 Score =  208 bits (529), Expect = 1e-51
 Identities = 104/201 (51%), Positives = 141/201 (70%), Gaps = 2/201 (0%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           KCGD   AR +FD M  K++V+WNAMITGY Q GM +EAI+LF+ M+   V P++IT+V 
Sbjct: 221 KCGDFVSARGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVG 280

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VLSACA +GAL LG+ +  Y  + GL  N+ ++T+LVDMY+KCGS+D+A  VF  M  K+
Sbjct: 281 VLSACASIGALDLGKRIDTYASQRGLQRNIFVSTALVDMYAKCGSLDNAQRVFENMPVKN 340

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTD--PNDITFIGVLSACNHSRLVEEGRVQ 535
               NAMI  LA HG  +++L++  +M K G D  PND+TF+GVLSAC H+ LV+EG   
Sbjct: 341 EVSWNAMISALAFHGRPQEALSLFERMSKEGRDACPNDVTFVGVLSACVHAGLVDEGWQY 400

Query: 536 FSNMVMKWGLSPKVEHYACMV 598
           F  M   +GL+PK+EH +CMV
Sbjct: 401 FELMNSSYGLTPKIEHCSCMV 421



 Score =  137 bits (344), Expect = 3e-30
 Identities = 72/166 (43%), Positives = 104/166 (62%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           +CG++  AR +FDE+S ++LVSWN+MI+GY + G   EA+ LF  M+ +   P+E+T+V+
Sbjct: 120 RCGELGSARRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGKMREEGFVPDEMTLVS 179

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VL AC  LG L LGR V  +   + + LN  +A++L+ MY KCG    A  VF  M  KD
Sbjct: 180 VLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCGDFVSARGVFDGMEGKD 239

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSAC 499
           V   NAMI G A +G   +++ +   M+  G  P+ IT +GVLSAC
Sbjct: 240 VVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVGVLSAC 285



 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
 Frame = +2

Query: 23  ARTLFDEMSCKNLVSWNAMITGYVQRGM-LEEAIQLFYLMQAKSVRPNEITMVNVLSACA 199
           A  LF ++   N  ++N MI G           +  +Y M+   ++PN+ T   +  ACA
Sbjct: 25  ASLLFSQIPQPNDYAFNVMIRGLTTTWQHYSTTLHFYYQMKFLGLKPNKFTYPFLFIACA 84

Query: 200 GLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDVAFCNA 379
            L  L  G+  H  + R GLD++     SL+ MY++CG +  A  VF +++ +D+   N+
Sbjct: 85  NLLELSHGQAAHSSVFRLGLDVDSHTTHSLITMYARCGELGSARRVFDEISERDLVSWNS 144

Query: 380 MILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSAC 499
           MI G +  G   +++ +  +M + G  P+++T + VL AC
Sbjct: 145 MISGYSKMGYANEAVGLFGKMREEGFVPDEMTLVSVLGAC 184


>ref|XP_007014357.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao] gi|508784720|gb|EOY31976.1| Pentatricopeptide
           repeat superfamily protein isoform 1 [Theobroma cacao]
          Length = 656

 Score =  208 bits (529), Expect = 1e-51
 Identities = 104/201 (51%), Positives = 141/201 (70%), Gaps = 2/201 (0%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           KCGD   AR +FD M  K++V+WNAMITGY Q GM +EAI+LF+ M+   V P++IT+V 
Sbjct: 312 KCGDFVSARGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVG 371

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VLSACA +GAL LG+ +  Y  + GL  N+ ++T+LVDMY+KCGS+D+A  VF  M  K+
Sbjct: 372 VLSACASIGALDLGKRIDTYASQRGLQRNIFVSTALVDMYAKCGSLDNAQRVFENMPVKN 431

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTD--PNDITFIGVLSACNHSRLVEEGRVQ 535
               NAMI  LA HG  +++L++  +M K G D  PND+TF+GVLSAC H+ LV+EG   
Sbjct: 432 EVSWNAMISALAFHGRPQEALSLFERMSKEGRDACPNDVTFVGVLSACVHAGLVDEGWQY 491

Query: 536 FSNMVMKWGLSPKVEHYACMV 598
           F  M   +GL+PK+EH +CMV
Sbjct: 492 FELMNSSYGLTPKIEHCSCMV 512



 Score =  137 bits (344), Expect = 3e-30
 Identities = 72/166 (43%), Positives = 104/166 (62%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           +CG++  AR +FDE+S ++LVSWN+MI+GY + G   EA+ LF  M+ +   P+E+T+V+
Sbjct: 211 RCGELGSARRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGKMREEGFVPDEMTLVS 270

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VL AC  LG L LGR V  +   + + LN  +A++L+ MY KCG    A  VF  M  KD
Sbjct: 271 VLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCGDFVSARGVFDGMEGKD 330

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSAC 499
           V   NAMI G A +G   +++ +   M+  G  P+ IT +GVLSAC
Sbjct: 331 VVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVGVLSAC 376



 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
 Frame = +2

Query: 23  ARTLFDEMSCKNLVSWNAMITGYVQRGM-LEEAIQLFYLMQAKSVRPNEITMVNVLSACA 199
           A  LF ++   N  ++N MI G           +  +Y M+   ++PN+ T   +  ACA
Sbjct: 116 ASLLFSQIPQPNDYAFNVMIRGLTTTWQHYSTTLHFYYQMKFLGLKPNKFTYPFLFIACA 175

Query: 200 GLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDVAFCNA 379
            L  L  G+  H  + R GLD++     SL+ MY++CG +  A  VF +++ +D+   N+
Sbjct: 176 NLLELSHGQAAHSSVFRLGLDVDSHTTHSLITMYARCGELGSARRVFDEISERDLVSWNS 235

Query: 380 MILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSAC 499
           MI G +  G   +++ +  +M + G  P+++T + VL AC
Sbjct: 236 MISGYSKMGYANEAVGLFGKMREEGFVPDEMTLVSVLGAC 275


>ref|XP_007207552.1| hypothetical protein PRUPE_ppa017672mg [Prunus persica]
           gi|462403194|gb|EMJ08751.1| hypothetical protein
           PRUPE_ppa017672mg [Prunus persica]
          Length = 745

 Score =  207 bits (527), Expect = 2e-51
 Identities = 102/199 (51%), Positives = 138/199 (69%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           KCG VEKARTLFD M  K++VSW+AMI+GY Q     E + LF  MQ + +RP+E T+V+
Sbjct: 319 KCGLVEKARTLFDSMPKKDIVSWSAMISGYAQHDRFSETLALFQEMQLRGIRPDETTLVS 378

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           V+SAC  L AL LG+ +H Y+ +NGL +NV L T+L++MY KCG +++A  VF   A K 
Sbjct: 379 VVSACTHLAALDLGQWIHAYIRKNGLKINVFLGTTLINMYMKCGCVENALEVFQGTAEKG 438

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFS 541
           V+  NA+ILGLA +G    SL + ++M+K G  PN+ITFIGVL AC H  LV+EGR  F 
Sbjct: 439 VSTWNALILGLAMNGLVEKSLEMFSEMKKCGVAPNEITFIGVLGACRHMGLVDEGRRHFD 498

Query: 542 NMVMKWGLSPKVEHYACMV 598
           ++V +  + P V+HY CMV
Sbjct: 499 SIVQEHKIEPNVKHYGCMV 517



 Score =  110 bits (274), Expect = 4e-22
 Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 31/207 (14%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           + G V +A  LF+E+  K++VSW+A+I+ Y Q  M EEA+ LF  M A  V  +E+ +V 
Sbjct: 187 RTGCVTEACRLFNELPEKDMVSWSALISCYEQNEMYEEALALFLRMVANGVMVDEVVVVT 246

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYS------------------- 304
           VLSACA L  +  G+ +H  + + G++  V L  + + MYS                   
Sbjct: 247 VLSACARLSIVHTGKLIHGLVVKIGIEAYVNLQNAFIHMYSSCGEIMAAQKLFNAAYHLD 306

Query: 305 ------------KCGSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEK 448
                       KCG ++ A  +F  M  KD+   +AMI G A H    ++LA+  +M+ 
Sbjct: 307 QISWNSMISGYLKCGLVEKARTLFDSMPKKDIVSWSAMISGYAQHDRFSETLALFQEMQL 366

Query: 449 NGTDPNDITFIGVLSACNHSRLVEEGR 529
            G  P++ T + V+SAC H   ++ G+
Sbjct: 367 RGIRPDETTLVSVVSACTHLAALDLGQ 393



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 45/186 (24%), Positives = 94/186 (50%), Gaps = 7/186 (3%)
 Frame = +2

Query: 14  VEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVNVLSA 193
           ++ +  +F+ +   N   WN M+  Y+QR   ++A+ L+ LM  K+  P+  T   ++ A
Sbjct: 28  IDLSLRIFNLIEDANGFIWNTMMRAYIQRNCPQKALNLYKLMVDKNAEPDNYTYPLLVQA 87

Query: 194 CAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDVAFC 373
           CA   +   GR++H ++ + G D +V +  +L+++Y+ C ++ DA  +F ++   +    
Sbjct: 88  CAIRVSEFEGRQIHNHILKTGFDSDVYVQNTLINIYAVCENMSDARNLFDEIPVLNPVSW 147

Query: 374 NAMILGLAHHGNGRDSLAILTQMEKNGTDPND--ITFIG----VLSACN-HSRLVEEGRV 532
           N+++ G    G+   +  I  +M +  T  ++  I   G    V  AC   + L E+  V
Sbjct: 148 NSILAGYVRAGDAEKAKLIYDRMPERNTIASNSMIVLFGRTGCVTEACRLFNELPEKDMV 207

Query: 533 QFSNMV 550
            +S ++
Sbjct: 208 SWSALI 213


>ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
           gi|241939236|gb|EES12381.1| hypothetical protein
           SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  207 bits (526), Expect = 2e-51
 Identities = 101/199 (50%), Positives = 135/199 (67%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           KCG++ KAR LFD M  +++V+W+AMI+GY Q     EA+ LF  MQ   V PN++TMV+
Sbjct: 267 KCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVS 326

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VLSACA LGAL+ G+ VH Y+ R  L L +IL T+LVD Y+KCG IDDA   F  M  K+
Sbjct: 327 VLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKN 386

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFS 541
                A+I G+A +G GR++L + + M K   +P D+TFIGVL AC+HS LVEEGR  F 
Sbjct: 387 SWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFD 446

Query: 542 NMVMKWGLSPKVEHYACMV 598
           +M   +G+ P+ EHY C+V
Sbjct: 447 SMTQDYGIKPRAEHYGCVV 465



 Score =  126 bits (317), Expect = 4e-27
 Identities = 68/175 (38%), Positives = 104/175 (59%)
 Frame = +2

Query: 5   CGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVNV 184
           C DV  A+ LFD +    +V WNA+IT Y++ G   E +++F  M    V  +EIT+V+V
Sbjct: 167 CRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSV 226

Query: 185 LSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDV 364
           ++AC  +G  KLG+ V  Y+   GL  N  L T+L+DMY+KCG +  A  +F  M ++DV
Sbjct: 227 VTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDV 286

Query: 365 AFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGR 529
              +AMI G       R++LA+ ++M+    +PND+T + VLSAC     +E G+
Sbjct: 287 VAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGK 341



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 39/145 (26%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
 Frame = +2

Query: 68  WNAMITGYVQRGMLEEAIQLFY-LMQAKSVRPNEITMVNVLSACAGLGALKLGREVHLYL 244
           +N ++   +  G  E+A+ LF  ++   SV P++ T+   L +C+ +  L +GR +  Y 
Sbjct: 86  YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145

Query: 245 GRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSL 424
            + GL  +  + +SL+ MY+ C  +  A L+F  +    V   NA+I     +GN  + +
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVV 205

Query: 425 AILTQMEKNGTDPNDITFIGVLSAC 499
            +   M + G   ++IT + V++AC
Sbjct: 206 EMFKGMLEVGVAFDEITLVSVVTAC 230


>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  207 bits (526), Expect = 2e-51
 Identities = 101/199 (50%), Positives = 138/199 (69%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           KCG VEKAR LFD M  K++VSW+A+I+GY Q     E + LF+ MQ   +RP+E  +V+
Sbjct: 382 KCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVS 441

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           V+SAC  L AL  G+ VH Y+ +NGL +NVIL T+L+DMY KCG +++A  VF  M  K 
Sbjct: 442 VISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKG 501

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFS 541
           V+  NA+I+GLA +G    SL + ++M+ NG  PN+ITF+GVL AC H  LV+EGR  F+
Sbjct: 502 VSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFA 561

Query: 542 NMVMKWGLSPKVEHYACMV 598
           +M+ K G+ P V+HY CMV
Sbjct: 562 SMIEKHGIEPNVKHYGCMV 580



 Score =  121 bits (303), Expect = 2e-25
 Identities = 70/207 (33%), Positives = 111/207 (53%), Gaps = 31/207 (14%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           K G V +A  LF+EM  K++VSW+A+I+GY Q GM EEA+ +F  M A  +R +E+ +V+
Sbjct: 250 KMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVS 309

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYS------------------- 304
           VLSACA L  +K G+ +H  + R G++  V L  +L+ MYS                   
Sbjct: 310 VLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLD 369

Query: 305 ------------KCGSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEK 448
                       KCGS++ A  +F  M  KD+   +A+I G A H    ++LA+  +M+ 
Sbjct: 370 QISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQL 429

Query: 449 NGTDPNDITFIGVLSACNHSRLVEEGR 529
               P++   + V+SAC H   +++G+
Sbjct: 430 GQIRPDETILVSVISACTHLAALDQGK 456



 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 62/244 (25%)
 Frame = +2

Query: 32  LFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVNVLSACAGLGA 211
           +FD +   N   WN M+  Y+Q    E+A+ L+ LM   +V P+  T   V+ ACA    
Sbjct: 97  IFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLL 156

Query: 212 LKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGS------------------------- 316
              G+E+H ++ + G D +V +  +L++MY+ CG+                         
Sbjct: 157 EFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAG 216

Query: 317 ------IDDACLVFVKMANKDVAFCNAMIL------------------------------ 388
                 +++A L+F +M  +++   N+MI+                              
Sbjct: 217 YVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALI 276

Query: 389 -GLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFSNMVMKWGL 565
            G   +G   ++L +  +M  NG   +++  + VLSAC H  +V+ G++    +V++ G+
Sbjct: 277 SGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKM-IHGLVIRMGI 335

Query: 566 SPKV 577
              V
Sbjct: 336 ESYV 339


>gb|EMT27117.1| hypothetical protein F775_08942 [Aegilops tauschii]
          Length = 588

 Score =  206 bits (524), Expect = 4e-51
 Identities = 98/199 (49%), Positives = 135/199 (67%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           KCG ++KAR LFD M  +++V+W+AMI+GY Q     EA+ +F  MQA  V PN++TMV+
Sbjct: 162 KCGQLDKARRLFDRMHSRDVVAWSAMISGYTQADRCREALAIFNKMQATEVNPNDVTMVS 221

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VLSACA LGAL+ G+  H Y+ R  L L V+L T+LVD Y+KCG I+DA   F  M  ++
Sbjct: 222 VLSACAVLGALETGKWAHSYIRRKALPLTVVLGTALVDFYAKCGCIEDAVKAFESMPMRN 281

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFS 541
                A+I G+A +G GR++L + + M +   +P D+TFIGVL AC+HS LVEEGR  F 
Sbjct: 282 SWTWTALIKGMASNGRGREALELFSSMREANIEPTDVTFIGVLLACSHSCLVEEGRRHFD 341

Query: 542 NMVMKWGLSPKVEHYACMV 598
           +M   +G+ P +EHY CMV
Sbjct: 342 SMTQDYGIHPSIEHYGCMV 360



 Score =  132 bits (331), Expect = 1e-28
 Identities = 68/175 (38%), Positives = 105/175 (60%)
 Frame = +2

Query: 5   CGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVNV 184
           CGD+  A+ LF+ +  K +V+WNAMI GY + G  +E +++F  +       +E+T+V+V
Sbjct: 62  CGDIVAAKVLFNAVEEKGVVTWNAMIAGYFKNGDWKEVVEMFKGILEVQAPFDEVTLVSV 121

Query: 185 LSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDV 364
            +AC  +G  KLG  +  Y    G+  N  LAT+LVDMY+KCG +D A  +F +M ++DV
Sbjct: 122 ATACGKIGDSKLGERIGDYAEEKGMVRNRNLATALVDMYAKCGQLDKARRLFDRMHSRDV 181

Query: 365 AFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGR 529
              +AMI G       R++LAI  +M+    +PND+T + VLSAC     +E G+
Sbjct: 182 VAWSAMISGYTQADRCREALAIFNKMQATEVNPNDVTMVSVLSACAVLGALETGK 236



 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 35/119 (29%), Positives = 63/119 (52%)
 Frame = +2

Query: 143 AKSVRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSID 322
           A +V P++ T+ N + +CA + AL  GR V  Y  + G   +  +  SL+ MY+ CG I 
Sbjct: 7   AANVCPDQHTIANTVKSCARIYALATGRSVQAYAVKLGFMADQFVLNSLIHMYASCGDIV 66

Query: 323 DACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSAC 499
            A ++F  +  K V   NAMI G   +G+ ++ + +   + +     +++T + V +AC
Sbjct: 67  AAKVLFNAVEEKGVVTWNAMIAGYFKNGDWKEVVEMFKGILEVQAPFDEVTLVSVATAC 125


>ref|XP_007020019.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508725347|gb|EOY17244.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 646

 Score =  206 bits (523), Expect = 5e-51
 Identities = 98/199 (49%), Positives = 142/199 (71%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           + GD+  AR LFD+MS ++++SWN MI+GY Q G  +EAI++F LMQ   VRPN +T+V+
Sbjct: 220 RIGDLRTARELFDKMSLRSVISWNVMISGYAQNGYFKEAIEMFRLMQIGEVRPNYVTLVS 279

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VL A + LGAL+LG+ VHLY  +N ++++ +L ++L+DMYSKCGSID A  VF +++  +
Sbjct: 280 VLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFERISKPN 339

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFS 541
               +AMI GLA HG    +L   ++ME  G  P+D+ +IGVLSAC+H+  VEEGR+ F+
Sbjct: 340 TITWSAMIGGLAMHGRAEGALDYFSRMELEGVTPSDVVYIGVLSACSHAGFVEEGRLFFN 399

Query: 542 NMVMKWGLSPKVEHYACMV 598
           +MV   G  P++EHY CMV
Sbjct: 400 HMVNVVGFEPRLEHYGCMV 418



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 54/227 (23%)
 Frame = +2

Query: 11  DVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEE------AIQLFYLMQAK-SVRPNEI 169
           D++ AR +F +M   N  SWN +I    +     E      A+ LF  M A  +V PN  
Sbjct: 68  DIDYARKVFRQMGEPNCFSWNTIIRALTESDESNETNEPLEALFLFTEMVADGNVLPNRF 127

Query: 170 TMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACL----- 334
           T  +VL ACA  G L  G +VH  + + G + +  +A++LV +Y  CG++++A +     
Sbjct: 128 TFPSVLKACARTGKLPEGEQVHGLVVKFGFEKDEFVASNLVRVYVMCGAMEEAHILLNKM 187

Query: 335 ------------------------------------------VFVKMANKDVAFCNAMIL 388
                                                     +F KM+ + V   N MI 
Sbjct: 188 MVEFENGGKLVRDKRRIEGNIVLWNVMIDGYVRIGDLRTARELFDKMSLRSVISWNVMIS 247

Query: 389 GLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGR 529
           G A +G  ++++ +   M+     PN +T + VL A +    +E G+
Sbjct: 248 GYAQNGYFKEAIEMFRLMQIGEVRPNYVTLVSVLPAISRLGALELGK 294


>ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
           gi|449513125|ref|XP_004164238.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  205 bits (521), Expect = 9e-51
 Identities = 99/199 (49%), Positives = 138/199 (69%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           K G+++KAR+LF+ M  +++V WN MI GY Q G+  E+++LF  M      PNE+T++ 
Sbjct: 219 KMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLA 278

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VLSAC  LGAL+ GR +H Y+   G+ +NV + T+L+DMYSKCGS++DA LVF ++ +KD
Sbjct: 279 VLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKD 338

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFS 541
           V   N+MI+G A HG  + +L +  +M + G  P DITFIG+LSAC H  LVEEGR  F 
Sbjct: 339 VVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFR 398

Query: 542 NMVMKWGLSPKVEHYACMV 598
            M  K+G+ PK+EHY CMV
Sbjct: 399 LMRDKYGIEPKIEHYGCMV 417



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 58/193 (30%), Positives = 89/193 (46%), Gaps = 28/193 (14%)
 Frame = +2

Query: 35  FDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVNVLSACA----- 199
           FDE    N+ S++A+I  +VQ  + + A   +  M +  V PN  T  +VL +C+     
Sbjct: 105 FDE---PNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGK 161

Query: 200 --GLGALKLGREVHLYLGRNGL---------------------DLNVILATSLVDMYSKC 310
                A+KLG    LY+ R GL                     + +++  T+++  YSK 
Sbjct: 162 VLHCQAIKLGLGSDLYV-RTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKM 220

Query: 311 GSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVL 490
           G +D A  +F  M  +DV   N MI G A  G   +SL +  +M      PN++T + VL
Sbjct: 221 GELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVL 280

Query: 491 SACNHSRLVEEGR 529
           SAC     +E GR
Sbjct: 281 SACGQLGALESGR 293


>ref|XP_002318172.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222858845|gb|EEE96392.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 617

 Score =  205 bits (521), Expect = 9e-51
 Identities = 105/201 (52%), Positives = 140/201 (69%), Gaps = 2/201 (0%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           KCGD+  AR +FD M  K++V+WNA+ITGY Q G   EAI LF  M+     P+ +TM+ 
Sbjct: 276 KCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIE 335

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VLSAC+ +GAL LG+ V  +    GL  +V +A++L+DMY+KCGS+DDA  VF  M +K+
Sbjct: 336 VLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKN 395

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEK-NGT-DPNDITFIGVLSACNHSRLVEEGRVQ 535
               NAMI  LA HG  +++L++  +M K NGT  PNDITFIGVLSAC H+ LV+EGR  
Sbjct: 396 EVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQL 455

Query: 536 FSNMVMKWGLSPKVEHYACMV 598
           F +M + +GL PKVEHY+CMV
Sbjct: 456 FESMNLSFGLVPKVEHYSCMV 476



 Score =  142 bits (358), Expect = 7e-32
 Identities = 72/176 (40%), Positives = 111/176 (63%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           +CG++  AR +FDEM  ++LVSWN+MI+GY + G  +EAI LF  M+ +   P+E+T+V+
Sbjct: 175 RCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVS 234

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VL AC  LG L LGR V  ++    +++N  + ++L+DMY KCG +  A  VF  M NKD
Sbjct: 235 VLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKD 294

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGR 529
           V   NA+I G A +G   +++ +   M + G  P+ +T I VLSAC+    ++ G+
Sbjct: 295 VVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGK 350



 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 43/164 (26%), Positives = 91/164 (55%), Gaps = 1/164 (0%)
 Frame = +2

Query: 11  DVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEE-AIQLFYLMQAKSVRPNEITMVNVL 187
           D+  A  +F++++  N+ ++N M+ G        +  ++L+Y +++  ++ N  T   + 
Sbjct: 76  DLAYASLVFNQLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLF 135

Query: 188 SACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDVA 367
            AC  +  L  G+  H  + + GLD +  +  SL+ MY++CG +  A  VF +M ++D+ 
Sbjct: 136 IACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLV 195

Query: 368 FCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSAC 499
             N+MI G +  G  ++++ +  +M + G +P+++T + VL AC
Sbjct: 196 SWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGAC 239


>ref|XP_006443657.1| hypothetical protein CICLE_v10019256mg [Citrus clementina]
           gi|568853066|ref|XP_006480188.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g48910-like [Citrus sinensis]
           gi|557545919|gb|ESR56897.1| hypothetical protein
           CICLE_v10019256mg [Citrus clementina]
          Length = 642

 Score =  204 bits (520), Expect = 1e-50
 Identities = 97/199 (48%), Positives = 142/199 (71%)
 Frame = +2

Query: 2   KCGDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVN 181
           + G+   +R LFDEM  +++VSWN MI+GY Q G   EAI++F  MQ   V PN +T+V+
Sbjct: 216 RLGNFRASRALFDEMPQRSVVSWNVMISGYAQNGQFREAIEMFLEMQNGDVCPNYVTLVS 275

Query: 182 VLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKD 361
           VL A + LGAL+LG+ VHLY  +N +++N IL ++L+DMYSKCGSI++A  VF ++  ++
Sbjct: 276 VLPAISRLGALELGKWVHLYAEKNAIEINDILGSALIDMYSKCGSIENAIQVFERIPQRN 335

Query: 362 VAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFS 541
               +AMI G A HG  +D+L   ++ME+ G  P+D+ +IG+LSAC+H+ LVEEGR+ F+
Sbjct: 336 AIAWSAMIGGFAMHGRAQDALDCFSRMEQAGVKPSDVVYIGLLSACSHAGLVEEGRLMFN 395

Query: 542 NMVMKWGLSPKVEHYACMV 598
           +MV   GL P++EHY CMV
Sbjct: 396 HMVNVTGLEPRIEHYGCMV 414



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 51/225 (22%)
 Frame = +2

Query: 8   GDVEKARTLFDEMSCKNLVSWNAMITGYVQRGMLEE---AIQLFYLMQAKS-VRPNEITM 175
           GD+E A  +F ++   N  S+N +I  + +    ++   A+ +FY M +   V PN+ T 
Sbjct: 66  GDLEYAHKVFTQIREPNCFSYNTIIRAFSECKDDDDSLHALLVFYQMVSDGLVLPNKFTF 125

Query: 176 VNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVK--- 346
            +VL ACA    L+ G++VH  + + GL  +  + ++LV MY  CG +D+A  +F K   
Sbjct: 126 PSVLKACAKTARLREGKQVHGLIVKFGLVYDEFVVSNLVRMYVMCGDMDNAHRLFYKSVV 185

Query: 347 --------------------------------------------MANKDVAFCNAMILGL 394
                                                       M  + V   N MI G 
Sbjct: 186 EFGNNGLLLRDTRRQEGYVILWNVMIDGYVRLGNFRASRALFDEMPQRSVVSWNVMISGY 245

Query: 395 AHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGR 529
           A +G  R+++ +  +M+     PN +T + VL A +    +E G+
Sbjct: 246 AQNGQFREAIEMFLEMQNGDVCPNYVTLVSVLPAISRLGALELGK 290