BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00033137
         (430 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DN...    42   4e-07
gb|ABD32368.2| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DN...    41   9e-07

>gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DNA-binding,
           putative [Medicago truncatula]
          Length = 195

 Score = 42.4 bits (98), Expect(2) = 4e-07
 Identities = 27/55 (49%), Positives = 34/55 (61%)
 Frame = -3

Query: 224 KNFLIKTAIRATMLQGAEYWVVKIQDASC**ILSVTEMRM*ELRRMSGKTRKIKL 60
           K    +TAIR  +L G E W VK Q  +    +SVTEMRM  LR MSGKTR+ ++
Sbjct: 126 KGKFYRTAIRPALLYGTECWAVKSQHEN---QVSVTEMRM--LRWMSGKTRQDRI 175



 Score = 37.4 bits (85), Expect(2) = 4e-07
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = -2

Query: 297 LSVGWLKWRCASRVLCDGYITIKLKEFF 214
           +  GWLKWR AS VLCD  + +KLK  F
Sbjct: 102 IQAGWLKWRRASGVLCDKKVPLKLKGKF 129


>gb|ABD32368.2| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DNA-binding,
           putative [Medicago truncatula]
          Length = 118

 Score = 41.2 bits (95), Expect(2) = 9e-07
 Identities = 26/64 (40%), Positives = 35/64 (54%)
 Frame = -3

Query: 224 KNFLIKTAIRATMLQGAEYWVVKIQDASC**ILSVTEMRM*ELRRMSGKTRKIKLGKKAF 45
           K    +T +R T+L G E W VK Q  +    +SV EM M  LR MSGKTR  ++     
Sbjct: 55  KGKFYRTTVRPTLLYGTECWTVKSQHENQ---VSVAEMMM--LRWMSGKTRHDRIRNDTI 109

Query: 44  GKRL 33
           G+R+
Sbjct: 110 GERV 113



 Score = 37.4 bits (85), Expect(2) = 9e-07
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = -2

Query: 297 LSVGWLKWRCASRVLCDGYITIKLKEFF 214
           +  GWLKWR AS VLCD  + +KLK  F
Sbjct: 31  IQAGWLKWRRASDVLCDKKVLLKLKGKF 58