BLASTX nr result
ID: Akebia27_contig00032894
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00032894
(670 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678... 100 4e-19
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 99 2e-18
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub... 98 3e-18
dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like ... 94 4e-17
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta... 94 4e-17
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta... 94 5e-17
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 92 1e-16
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 92 1e-16
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 92 2e-16
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali... 92 2e-16
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana] 92 2e-16
ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein A... 91 3e-16
gb|ABA97267.1| retrotransposon protein, putative, LINE subclass ... 90 7e-16
gb|EEE53511.1| hypothetical protein OsJ_36687 [Oryza sativa Japo... 90 7e-16
gb|ABA99740.2| retrotransposon protein, putative, unclassified [... 90 7e-16
ref|XP_002453810.1| hypothetical protein SORBIDRAFT_04g018371 [S... 88 2e-15
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 87 6e-15
ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcript... 86 8e-15
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 86 8e-15
ref|XP_002439202.1| hypothetical protein SORBIDRAFT_09g002195 [S... 86 8e-15
>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
putative protein [Arabidopsis thaliana]
Length = 473
Score = 100 bits (249), Expect = 4e-19
Identities = 65/215 (30%), Positives = 96/215 (44%), Gaps = 4/215 (1%)
Frame = -2
Query: 648 FWTM-ECPMEASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQWFPQEL 472
FW + E SW WRKILK R +A ++ K I NG TS W++ W G L
Sbjct: 165 FWAVRENTSLGSWMWRKILKFRDIARTLCKVEINNGARTSFWYDDWSDLGRLIDSAGDRG 224
Query: 471 RYDSTMHSEAMVSALIDNGQWRQHYQRYQQTRLATSLRAFNLHELQQISLRNEGSDSVVW 292
D ++ A V N + R+H + + ++N RN+ D +W
Sbjct: 225 AIDLGINKHATVVEAWGNRRRRRHRTNFLNRVEERLILSWNS--------RNQAEDRALW 276
Query: 291 TGTTN---GTFSIKSAFECCYADDYQPAWTSLLIGRIAAPRHKFFLWLALNNALKTKDWL 121
G N FS K + + AW + A P+H F +WLA++N L T D +
Sbjct: 277 KGKENRFRSIFSTKDTWNHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRM 336
Query: 120 RNRNIVDCSTCIFCNTDRENINHLFFGCQLSRDVW 16
N+ +TCI CN E+ +HLFF C + ++W
Sbjct: 337 TLWNMGVDATCILCNKALESRDHLFFSCPFATEIW 371
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 98.6 bits (244), Expect = 2e-18
Identities = 67/222 (30%), Positives = 95/222 (42%), Gaps = 4/222 (1%)
Frame = -2
Query: 669 FKVRTKHFWTM-ECPMEASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILF 493
F +R FW+ E SW W+K+LK R LA S+ K + NG+ TS W++ W H G L
Sbjct: 1206 FIIRKGTFWSANERSSLGSWMWKKLLKYRELAKSMHKVEVRNGSSTSFWYDHWSHLGRLL 1265
Query: 492 QWFPQELRYDSTMHSEAMVSALIDNGQWRQHYQRYQQTRLATSLRAFNLHELQQISLRNE 313
D + E + ++ Q RQH + + + A + LQQ R
Sbjct: 1266 DITGTRRVIDLGIPLETNLETVLRTHQHRQH-----RAAIYNRINA-EIQRLQQQE-REA 1318
Query: 312 GSDSVVWTGTTNG---TFSIKSAFECCYADDYQPAWTSLLIGRIAAPRHKFFLWLALNNA 142
G D +W N F K + Q W + + P++ F LWL + N
Sbjct: 1319 GPDISLWRSLKNDFNKRFITKVTWNNVRTHQPQQNWYKGVWFPYSTPKYSFLLWLTVQNR 1378
Query: 141 LKTKDWLRNRNIVDCSTCIFCNTDRENINHLFFGCQLSRDVW 16
L T D ++ N TC CN E +HLFF CQ + VW
Sbjct: 1379 LSTGDRIKAWNSGQLVTCTLCNNAEETRDHLFFSCQYTSYVW 1420
>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
Length = 441
Score = 97.8 bits (242), Expect = 3e-18
Identities = 70/228 (30%), Positives = 97/228 (42%), Gaps = 10/228 (4%)
Frame = -2
Query: 669 FKVRTKHFWTM-ECPMEASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILF 493
+ +R FW++ + SW WRK+LK R LAS ++ I NG S WH+ W G L
Sbjct: 128 YVIRKGSFWSLRDTSTLGSWMWRKLLKYRHLASGFTQYEIRNGKGVSFWHDNWSPLGPLI 187
Query: 492 QWFPQELRYDSTMHSEAMVSALIDNGQWRQHYQRYQQTRLATSLRAFNLHELQQISLRNE 313
D + A V+ + + + R Q L EL+ L E
Sbjct: 188 AISGTRGCIDMGIDIHATVAEALTHRRRRHRADHLNQMEA-------QLEELRTKGLV-E 239
Query: 312 GSDSVVWTGTTNGTFSIKSAFECCYADD---------YQPAWTSLLIGRIAAPRHKFFLW 160
D V+W G G F + + +AD YQ W S A P++ F W
Sbjct: 240 TEDVVLWKGK-GGRFKPSFSTKETWADTREQKPRNEWYQGIWFSH-----ATPKYSFITW 293
Query: 159 LALNNALKTKDWLRNRNIVDCSTCIFCNTDRENINHLFFGCQLSRDVW 16
LA N L T D + + N +C+FC E NHLFF C+ SR+VW
Sbjct: 294 LATKNRLSTGDRMMSWNAGVNLSCVFCQEQTETRNHLFFTCRYSREVW 341
>dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 637
Score = 94.0 bits (232), Expect = 4e-17
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 4/220 (1%)
Frame = -2
Query: 663 VRTKHFWTM-ECPMEASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQW 487
+R + FW++ E SW W+KILK R A + + +G TS WH+ W G L Q
Sbjct: 134 IRKETFWSVKENTSLGSWLWKKILKQRDKARLFHQMEVRSGTTTSFWHDHWSPLGRLHQH 193
Query: 486 FPQELRYDSTMHSEAMVSALIDNGQWRQHYQRYQQTRLATSLRAFNLHELQQISLRNEGS 307
D + ++A V+ ++D + ++H A L H R++ S
Sbjct: 194 LGSRGTIDLGIATQATVAEVLDTHRRKRHR--------ADFLNQIENHIELVRQARSQES 245
Query: 306 DSVVWT---GTTNGTFSIKSAFECCYADDYQPAWTSLLIGRIAAPRHKFFLWLALNNALK 136
D +W + G+FS ++ + W + + P++ F WLA +N L
Sbjct: 246 DRSLWKQKEDSFKGSFSSPKTWQQIRTISNECEWYRGVWFPSSTPKYSFVTWLAFHNRLA 305
Query: 135 TKDWLRNRNIVDCSTCIFCNTDRENINHLFFGCQLSRDVW 16
T D L N +TC+FC+ + E +HLFF C S +W
Sbjct: 306 TGDRLYKWNSEARATCVFCDEELETRDHLFFSCPYSSQIW 345
>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1447
Score = 94.0 bits (232), Expect = 4e-17
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 7/223 (3%)
Frame = -2
Query: 663 VRTKHFWTMECPME-ASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQW 487
++ FW ++ SW W+K+LK R +A + K + NG TS W++ W G + +
Sbjct: 1135 LKNNSFWIIKSSTTMGSWMWKKLLKYREVAKTFSKIEVHNGQRTSFWYDDWSCMGRIMNF 1194
Query: 486 FPQELRYDSTMHSEAMVSALIDNGQWRQH---YQRYQQTRLATSLRAFNLHELQQISLRN 316
+ D + + +V+ + D + R+H Y + +ATS + R
Sbjct: 1195 IGDKGIIDLGIKRDKLVAEVWDTHRSRRHITDYLNQVENVIATSK-----------ANRK 1243
Query: 315 EGSDSVVWTGTTN---GTFSIKSAFECCYADDYQPAWTSLLIGRIAAPRHKFFLWLALNN 145
E +D VVW G + FS + + + W + A P+ F +WLA +
Sbjct: 1244 EKADDVVWRGRNDIYKPQFSTRDTWNNIRTTATKVTWYKGVWFYQATPKFSFCVWLAALD 1303
Query: 144 ALKTKDWLRNRNIVDCSTCIFCNTDRENINHLFFGCQLSRDVW 16
L T D + N V +C+FCN ++ +HLFF C S +VW
Sbjct: 1304 RLSTGDRMANWKGVSSGSCVFCNHPTKSRDHLFFNCPYSSEVW 1346
>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1319
Score = 93.6 bits (231), Expect = 5e-17
Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 12/213 (5%)
Frame = -2
Query: 618 SWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQWFPQELRYDSTMHSEAM 439
S+ WR IL R L + +K I NG T++W + W G + + S M+
Sbjct: 857 SYTWRSILYGRELLNGGLKRLIGNGEQTNVWIDKWLFDG----HSRRPMNLHSLMNIHMK 912
Query: 438 VSALIDNGQWRQHYQRYQQTRLATSLRAFNLHELQQISLRNEGSDSVVWTGTTNGTFSIK 259
VS LID + ++ + ++ +H+ IS DS W GT NG +++K
Sbjct: 913 VSHLIDPLTRNWNLKKLTELFHEKDVQLI-MHQRPLIS----SEDSYCWAGTNNGLYTVK 967
Query: 258 SAFECCYADDYQPAWTSL--------LIGRI----AAPRHKFFLWLALNNALKTKDWLRN 115
S +E + ++ + L ++ P+ K F+W AL AL +D LR+
Sbjct: 968 SGYERSSRETFKNLFKEADVYPSVNPLFDKVWSLETVPKIKVFMWKALKGALAVEDRLRS 1027
Query: 114 RNIVDCSTCIFCNTDRENINHLFFGCQLSRDVW 16
R I C+FC + E INHL F C +R VW
Sbjct: 1028 RGIRTADGCLFCKEEIETINHLLFQCPFARQVW 1060
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 92.4 bits (228), Expect = 1e-16
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 4/220 (1%)
Frame = -2
Query: 663 VRTKHFWTMECPME-ASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQW 487
++ + FW++ SW WR++LK R +A S K + NG +TS W + W +G L
Sbjct: 632 LKKESFWSIGTHSTLGSWIWRRLLKHREVAKSFCKIEVNNGVNTSFWFDNWSEKGPLINL 691
Query: 486 FPQELRYDSTMHSEAMVSALIDNGQWRQHYQRYQQTRLATSLRAFNLHELQQISLRNEGS 307
D + ++ W + ++ + + L + Q ++ E
Sbjct: 692 TGARGAIDMGISRHMTLAEA-----WSRRRRKRHRVEILNEFEEILLQKYQHRNIELE-- 744
Query: 306 DSVVWTGTTN---GTFSIKSAFECCYADDYQPAWTSLLIGRIAAPRHKFFLWLALNNALK 136
D+++W G + FS K + Q AW + A P+ F WLA+ N L
Sbjct: 745 DAILWRGKEDVFKARFSTKDTWNHIRTSSNQRAWHKGVWFAHATPKFSFCAWLAIRNRLS 804
Query: 135 TKDWLRNRNIVDCSTCIFCNTDRENINHLFFGCQLSRDVW 16
T D + N +TC+FC++ E +HLFF C S ++W
Sbjct: 805 TGDRMMTWNNGTPTTCVFCSSPMETRDHLFFQCCYSSEIW 844
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 92.0 bits (227), Expect = 1e-16
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 6/228 (2%)
Frame = -2
Query: 666 KVRTKHFWTMECPMEASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQW 487
++R +FW E SW W+ IL R LA ++ ++ NG S W++ W + G L +
Sbjct: 902 RLRHVNFWNAEAASHHSWIWKAILGLRPLAKRFLRGAVGNGQLLSYWYDHWSNLGPLIEA 961
Query: 486 FPQELRYDSTMHSEAMVSALIDNGQWRQHYQRYQQTRLATSLRAFNLHELQQISLRNEGS 307
+ +H A+V+ + W R + LA +LR+ L+ + G
Sbjct: 962 IGASGPQLTGIHESAVVTEASSSTGWILPSARTRNASLA-NLRSTLLN--SPAPSGDRGE 1018
Query: 306 DSVVW--TGTTNGTFSIKSAFECCYADDYQPAWTSLLIGRIAAPRHKFFLWLALNNAL-- 139
D+ W G+++ +FS K +EC D W + + + P++ F W+A N L
Sbjct: 1019 DTYTWYIEGSSSTSFSSKLTWECLRQRDTTKLWAAAVWYKGCIPKYAFNFWVAHLNRLPV 1078
Query: 138 --KTKDWLRNRNIVDCSTCIFCNTDRENINHLFFGCQLSRDVWHFVLA 1
+T W NR S C C + E +HLF C L +W VLA
Sbjct: 1079 RARTTHWSTNRP----SLCCVCQRETETRDHLFIHCTLGSLIWQQVLA 1122
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 91.7 bits (226), Expect = 2e-16
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 8/226 (3%)
Frame = -2
Query: 669 FKVRTKHFWTM-ECPMEASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILF 493
+ +R K W++ + SW WRKILK R +A S + + NG S W++ W G L
Sbjct: 556 YLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGNGESASFWYDHWSAHGRLI 615
Query: 492 QWFPQELRYDSTMHSEAMVSALIDNGQWRQHYQRYQQTRLATSLRAFNLHELQQISLRNE 313
+ D + EA V+ W + +R +T L + + Q+I ++
Sbjct: 616 DTVGDKGTIDLGIPREASVA-----DAWTRRSRRRHRTSLLNEIE--EMMAYQRIH-HSD 667
Query: 312 GSDSVVWTGTTN---GTFSIKSAFECCYADDYQPAWTSLLIGRIAAPRHKFFLWLALNNA 142
D+V+W G + FS + + A +W + R A P++ WLA++N
Sbjct: 668 AEDTVLWRGKNDVFKPHFSTRDTWHLIKATSSTVSWHKGVWFRHATPKYALCTWLAIHNR 727
Query: 141 LKTKD----WLRNRNIVDCSTCIFCNTDRENINHLFFGCQLSRDVW 16
L T D W + ++ C+ C + + + HLFF C + VW
Sbjct: 728 LPTGDRMLKWNSSGSV--SGNCVLCTNNSKTLEHLFFSCSYASTVW 771
>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 91.7 bits (226), Expect = 2e-16
Identities = 65/212 (30%), Positives = 94/212 (44%), Gaps = 10/212 (4%)
Frame = -2
Query: 648 FWTM-ECPMEASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQWFPQEL 472
FW + E SW WRKILK R +A ++ K I NG TS W++ W G L +
Sbjct: 246 FWAVRENTSLGSWMWRKILKFRDIARTLCKVEINNGAQTSFWYDDWSDLGRLIESAGDRG 305
Query: 471 RYDSTMHSEAMVSALIDNGQWRQHYQRY---QQTRLATSLRAFNLHELQQISLRNEGSDS 301
D ++ A V N + R+H + + RL S + RN+ D
Sbjct: 306 AIDLGINKHATVVEAWGNRRRRRHRANFLNRVEERLVLSWNS-----------RNQAEDC 354
Query: 300 VVWTGTTN---GTFSIKSAFECCYADDYQPAWTSLLIGRIAAPRHKFFLWLALNNALKTK 130
+W G N FS K + + AW + A P+H F +WLA++N L T
Sbjct: 355 ALWKGKENRFRSIFSTKDTWNHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRLSTG 414
Query: 129 DWLRNRNIVDCSTCIFCNT---DRENINHLFF 43
D + N+ +TCI CN R+++ HLFF
Sbjct: 415 DRMTLWNMGVDATCILCNNALESRDHLQHLFF 446
>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
Length = 478
Score = 91.7 bits (226), Expect = 2e-16
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 4/222 (1%)
Frame = -2
Query: 669 FKVRTKHFWTMECPME-ASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILF 493
+ +R FW++ SW W+KILK R LAS +KH I NG++TS W + W G L
Sbjct: 164 YLLRKGSFWSISGNTTLGSWMWKKILKHRALASGFVKHDIHNGSNTSFWFDNWSKIGRLI 223
Query: 492 QWFPQELRYDSTMHSEAMVSALIDNGQWRQHYQRYQQTRLATSLRAFNLHELQQISLRNE 313
D + A V+ + N + R+H R T LR ++ +
Sbjct: 224 DVTGHRGCIDMGITLHASVAEAVVNHRPRRH-------RHDTLLRIEDVIAEVRHQGLTS 276
Query: 312 GSDSVVWTGTTN---GTFSIKSAFECCYADDYQPAWTSLLIGRIAAPRHKFFLWLALNNA 142
G D+V W G + F+ K + + W + A P++ W+A+ N
Sbjct: 277 GEDTVRWKGNGDIFKPCFNTKETWAATREPKLKVNWYKGVWFSHATPKYSVLAWIAIKNR 336
Query: 141 LKTKDWLRNRNIVDCSTCIFCNTDRENINHLFFGCQLSRDVW 16
L T D + + N S+C+ C+ E +HLFF C S +VW
Sbjct: 337 LTTGDRMLSWNAGADSSCVLCHHLVETRDHLFFTCPYSAEVW 378
>ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
sativus]
Length = 288
Score = 91.3 bits (225), Expect = 3e-16
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 3/223 (1%)
Frame = -2
Query: 663 VRTKHFWTMECPMEASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQWF 484
++ + W ++ + SW +R IL+ R + + +K + NG +W +P G + Q F
Sbjct: 59 LKGRSLWEIDVGVGRSWCFRAILRKRDILKAHVKMEVGNGKKCRVWLDPRIQGGPIIQQF 118
Query: 483 PQELRYDSTMHSEA-MVSALIDNGQWRQHYQRYQQTRLATSLRAFNLHELQQISLRNEGS 307
+ + YD+ +A +V + +G WR SL ++ + Q +R S
Sbjct: 119 GERVIYDADSRRDARLVDFMGRDGDWRWSL---------VSLDLMDIWDRIQ-GVRPSPS 168
Query: 306 DSVVWTGT--TNGTFSIKSAFECCYADDYQPAWTSLLIGRIAAPRHKFFLWLALNNALKT 133
+W ++ +FSI SA E + W+ LL G P+H F+ WLA+ + L T
Sbjct: 169 VEDMWVRVPGSHESFSIVSACEAIRPHSSRVGWSGLLWGGGNIPKHSFYTWLAIKDRLGT 228
Query: 132 KDWLRNRNIVDCSTCIFCNTDRENINHLFFGCQLSRDVWHFVL 4
+D L + +CI C + E+ +HLFF C ++W +L
Sbjct: 229 RDRLSRWDSSIPLSCILCGRNYESRDHLFFPCPFGWEIWSRIL 271
>gb|ABA97267.1| retrotransposon protein, putative, LINE subclass [Oryza sativa
Japonica Group]
Length = 579
Score = 89.7 bits (221), Expect = 7e-16
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 2/205 (0%)
Frame = -2
Query: 615 WAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQWFPQELRYDSTMHSEAMV 436
W W++ + F AS++I ++ NGN T WH+ W + +P L +T ++ +
Sbjct: 362 WLWQEYRQV-FRASTVI--TLGNGNRTKFWHDRWLEGSSPKELYPS-LYQIATRKNKTVA 417
Query: 435 SALIDNGQWRQHYQRYQQTRLATSLRAFN--LHELQQISLRNEGSDSVVWTGTTNGTFSI 262
L DN +W + +R T +R F H++QQ+ L+ + D+++W T+NGT+S
Sbjct: 418 QELQDN-RWLRQMRRMNTT---VQVREFIPLWHQIQQVVLQEQMDDTIMWRWTSNGTYSA 473
Query: 261 KSAFECCYADDYQPAWTSLLIGRIAAPRHKFFLWLALNNALKTKDWLRNRNIVDCSTCIF 82
K+ + + Q + A + KFF WL ++ + T D L R + C
Sbjct: 474 KTVYRIQFVGGIQDNRSDFFWKAKAENKCKFFGWLMIHKKILTADKLHIRAWDNSHICPL 533
Query: 81 CNTDRENINHLFFGCQLSRDVWHFV 7
C + E HL C ++ VW +
Sbjct: 534 CGVELETATHLLMDCSFAKQVWRLI 558
>gb|EEE53511.1| hypothetical protein OsJ_36687 [Oryza sativa Japonica Group]
Length = 1441
Score = 89.7 bits (221), Expect = 7e-16
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 2/200 (1%)
Frame = -2
Query: 609 WRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQG--ILFQWFPQELRYDSTMHSEAMV 436
W+ R + +S+ +H + +GN T W W +G I W + + ++ V
Sbjct: 367 WKSDKDVRDIFNSVAQHIVGDGNRTDFWRGKWLPRGGSIANNW---PILFSFVGRTKITV 423
Query: 435 SALIDNGQWRQHYQRYQQTRLATSLRAFNLHELQQISLRNEGSDSVVWTGTTNGTFSIKS 256
+ + N +W + Q R A ELQ +SL++ +DSV+W + NG FS S
Sbjct: 424 AQGLLNNRWVRDLQGSLSNRALVDYLAL-WDELQLVSLQSGEADSVLWRFSANGVFSASS 482
Query: 255 AFECCYADDYQPAWTSLLIGRIAAPRHKFFLWLALNNALKTKDWLRNRNIVDCSTCIFCN 76
A+E ++ + L+ A R +FFLWLA+ T D L R TC+ C
Sbjct: 483 AYEFLFSTSIKCPHGELIWKTKAPARVRFFLWLAVKGRCLTADNLSKRGWPHDPTCLLCQ 542
Query: 75 TDRENINHLFFGCQLSRDVW 16
+ E+ NHL C + VW
Sbjct: 543 SAPEDCNHLLVKCPFTNRVW 562
>gb|ABA99740.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1618
Score = 89.7 bits (221), Expect = 7e-16
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 2/200 (1%)
Frame = -2
Query: 609 WRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQG--ILFQWFPQELRYDSTMHSEAMV 436
W+ R + +S+ +H + +GN T W W +G I W + + ++ V
Sbjct: 422 WKSDKDVRDIFNSVAQHIVGDGNRTDFWRGKWLPRGGSIANNW---PILFSFVGRTKITV 478
Query: 435 SALIDNGQWRQHYQRYQQTRLATSLRAFNLHELQQISLRNEGSDSVVWTGTTNGTFSIKS 256
+ + N +W + Q R A ELQ +SL++ +DSV+W + NG FS S
Sbjct: 479 AQGLLNNRWVRDLQGSLSNRALVDYLAL-WDELQLVSLQSGEADSVLWRFSANGVFSASS 537
Query: 255 AFECCYADDYQPAWTSLLIGRIAAPRHKFFLWLALNNALKTKDWLRNRNIVDCSTCIFCN 76
A+E ++ + L+ A R +FFLWLA+ T D L R TC+ C
Sbjct: 538 AYEFLFSTSIKCPHGELIWKTKAPARVRFFLWLAVKGRCLTADNLSKRGWPHDPTCLLCQ 597
Query: 75 TDRENINHLFFGCQLSRDVW 16
+ E+ NHL C + VW
Sbjct: 598 SAPEDCNHLLVKCPFTNRVW 617
>ref|XP_002453810.1| hypothetical protein SORBIDRAFT_04g018371 [Sorghum bicolor]
gi|241933641|gb|EES06786.1| hypothetical protein
SORBIDRAFT_04g018371 [Sorghum bicolor]
Length = 498
Score = 88.2 bits (217), Expect = 2e-15
Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 1/222 (0%)
Frame = -2
Query: 669 FKVRTKHFWTMECP-MEASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILF 493
FK +TK C + S W+ ++ A A ++ I NG+ W + W L
Sbjct: 161 FKYKTKKPNIFCCSKVGTSPFWKGVIWAMQAAHMGVRWVIGNGDKIRFWEDQWLGNTCLA 220
Query: 492 QWFPQELRYDSTMHSEAMVSALIDNGQWRQHYQRYQQTRLATSLRAFNLHELQQISLRNE 313
F L + H + + + NG+ Q R ++ L +Q I+L NE
Sbjct: 221 ILF-WPLYVINEQHGKTVRE--VWNGEELQLSFRRDVSKRIMGLWEELKAAVQSITLNNE 277
Query: 312 GSDSVVWTGTTNGTFSIKSAFECCYADDYQPAWTSLLIGRIAAPRHKFFLWLALNNALKT 133
D ++WT +++G +S++S + P + + PR +FFLWL NN + T
Sbjct: 278 -EDQILWTYSSSGKYSVQSLYAIVNHRGVVPIFVHAVWKLNIPPRVQFFLWLLSNNRVLT 336
Query: 132 KDWLRNRNIVDCSTCIFCNTDRENINHLFFGCQLSRDVWHFV 7
+D L R V+ TC+FCN ++E+I HLFF C ++R+VW ++
Sbjct: 337 RDNLAKRREVNDPTCLFCN-EKESITHLFFQCCVARNVWEYI 377
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 86.7 bits (213), Expect = 6e-15
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 4/220 (1%)
Frame = -2
Query: 663 VRTKHFWTMECPM-EASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQW 487
+R FW ++ + + SW W+K+LK R +A ++ K + NG TS W++ W G L +
Sbjct: 911 LRNASFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGNGKQTSFWYDNWSDLGQLLER 970
Query: 486 FPQELRYDSTMHSEAMVSALIDNGQWRQHYQRYQQTRLATSLRAFNLHELQQISLRNEGS 307
D + V N + R+H + +L+ + R E
Sbjct: 971 TGDRGLIDLGISRRMTVEEAWTNRRQRRHRNDVYNV-IEDALK-------KSWDTRTETE 1022
Query: 306 DSVVWTGTTN---GTFSIKSAFECCYADDYQPAWTSLLIGRIAAPRHKFFLWLALNNALK 136
D V+W G ++ TFS + + + + W ++ A P++ F WLA + L
Sbjct: 1023 DKVLWRGKSDVFRTTFSTRDTWHHTRSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLP 1082
Query: 135 TKDWLRNRNIVDCSTCIFCNTDRENINHLFFGCQLSRDVW 16
T D + N + CIFC E +HLFF C + +W
Sbjct: 1083 TGDRMINWANGIATDCIFCQGTLETRDHLFFTCSFTSVIW 1122
>ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcriptase)-related protein
[Arabidopsis thaliana] gi|332643359|gb|AEE76880.1|
RNA-directed DNA polymerase (reverse
transcriptase)-related protein [Arabidopsis thaliana]
Length = 746
Score = 86.3 bits (212), Expect = 8e-15
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 3/203 (1%)
Frame = -2
Query: 618 SWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQWFPQELRYDSTMHSEAM 439
SW W+KILK R LAS +KH I NG++TS W + W G L D + A
Sbjct: 154 SWMWKKILKHRALASGFVKHDIHNGSNTSFWFDNWSKIGRLIDVTGHRGCIDMGITLHAS 213
Query: 438 VSALIDNGQWRQHYQRYQQTRLATSLRAFNLHELQQISLRNEGSDSVVWTGTTN---GTF 268
V+ + N + R+H R T LR ++ + G D+V W G + F
Sbjct: 214 VAEAVVNHRPRRH-------RHDTLLRIEDVIAEVRHQGLTSGEDTVRWKGNGDIFKPCF 266
Query: 267 SIKSAFECCYADDYQPAWTSLLIGRIAAPRHKFFLWLALNNALKTKDWLRNRNIVDCSTC 88
+ K + + W + A P++ W+A+ N L T D + + N S+C
Sbjct: 267 NTKETWAATREPKLKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSC 326
Query: 87 IFCNTDRENINHLFFGCQLSRDV 19
+ C+ E +HLFF C S +V
Sbjct: 327 VLCHHLVETRDHLFFTCPYSAEV 349
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 86.3 bits (212), Expect = 8e-15
Identities = 63/219 (28%), Positives = 94/219 (42%), Gaps = 18/219 (8%)
Frame = -2
Query: 618 SWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQWFPQELRYDSTMHSEAM 439
S+AWR IL R L ++ I NG T +W + W H G + L ++ +
Sbjct: 904 SYAWRSILFGRELLMQGLRTVIGNGQKTFVWTDKWLHDGSN----RRPLNRRRFINVDLK 959
Query: 438 VSALID--NGQWRQHYQR----YQQTRLATSLRAFNLHELQQISLRNEGSDSVVWTGTTN 277
VS LID + W + R ++ + R E DS W + N
Sbjct: 960 VSQLIDPTSRNWNLNMLRDLFPWKDVEIILKQRPLFFKE-----------DSFCWLHSHN 1008
Query: 276 GTFSIKSAFECCYADD----YQPAWTSLLIGRI--------AAPRHKFFLWLALNNALKT 133
G +S+K+ +E YQ A + + AP+ + FLW AL+ A+
Sbjct: 1009 GLYSVKTGYEFLSKQVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIPV 1068
Query: 132 KDWLRNRNIVDCSTCIFCNTDRENINHLFFGCQLSRDVW 16
+D LR R I C+ C+T+ E INH+ F C L+R VW
Sbjct: 1069 EDRLRTRGIRSDDGCLMCDTENETINHILFECPLARQVW 1107
>ref|XP_002439202.1| hypothetical protein SORBIDRAFT_09g002195 [Sorghum bicolor]
gi|241944487|gb|EES17632.1| hypothetical protein
SORBIDRAFT_09g002195 [Sorghum bicolor]
Length = 521
Score = 86.3 bits (212), Expect = 8e-15
Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 2/223 (0%)
Frame = -2
Query: 669 FKVRTKHFWTMECP-MEASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPW-HHQGIL 496
FK +TK C + AS W+ ++ A A IK + NG W + W + +
Sbjct: 175 FKYKTKQPNIFCCSAVGASPFWKGVIWAMQAAHMGIKWVVGNGEKVRFWEDQWLGNTSLA 234
Query: 495 FQWFPQELRYDSTMHSEAMVSALIDNGQWRQHYQRYQQTRLATSLRAFNLHELQQISLRN 316
++P Y VS + D + ++R+ L + ++ I L N
Sbjct: 235 ILFWPL---YVINEQQGKTVSEVWDGEDLKLSFRRHVSMGLMGLWEELKV-AVENIILNN 290
Query: 315 EGSDSVVWTGTTNGTFSIKSAFECCYADDYQPAWTSLLIGRIAAPRHKFFLWLALNNALK 136
E D ++W+ + G +S++S + P + + PR +FFLWL NN +
Sbjct: 291 E-EDQILWSYNSTGRYSVQSLYAIINHRGVVPVFVPAVWKLNIPPRVQFFLWLLSNNRVL 349
Query: 135 TKDWLRNRNIVDCSTCIFCNTDRENINHLFFGCQLSRDVWHFV 7
T+D L R V+ STC+FC + E I HLFF C + R+VW F+
Sbjct: 350 TRDNLAKRREVEDSTCLFCG-ENETILHLFFQCCVVRNVWEFI 391