BLASTX nr result

ID: Akebia27_contig00032629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00032629
         (1186 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein A...    47   3e-06

>ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 217

 Score = 47.0 bits (110), Expect(2) = 3e-06
 Identities = 21/54 (38%), Positives = 32/54 (59%)
 Frame = +3

Query: 411 PSSLCSVLEVWHSHGVSFSASKRILWIPFAIFWGIWKERNVYSVEGPEHSLQEI 572
           P S+  VL+ W+  G +    KR   +P  I+W IWKERN    EG ++++Q+I
Sbjct: 134 PGSIIEVLQCWNRDGNAGKNEKRWRIVPACIWWTIWKERNQRCFEGKQNNIQKI 187



 Score = 32.3 bits (72), Expect(2) = 3e-06
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 284 PWMPSFYSMCKSDGESVGYLFVHCKLAHNMWYLF 385
           P + S   +C+   E+V +LF+HCK    +W +F
Sbjct: 90  PNLRSSCYLCEEQVETVNHLFLHCKWTDQLWQMF 123


Top