BLASTX nr result
ID: Akebia27_contig00032471
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00032471
(1056 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera] 146 2e-46
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] 146 2e-46
emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera] 139 3e-44
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 140 2e-42
emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera] 139 6e-42
emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera] 135 6e-41
emb|CAN59934.1| hypothetical protein VITISV_001876 [Vitis vinifera] 123 3e-39
emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera] 146 1e-38
emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera] 145 2e-38
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 117 2e-37
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 156 2e-35
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 136 8e-35
gb|AAK29467.1| polyprotein-like [Solanum chilense] 140 3e-34
emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera] 122 1e-33
emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera] 126 2e-33
emb|CAN71391.1| hypothetical protein VITISV_038145 [Vitis vinifera] 149 2e-33
ref|XP_006354297.1| PREDICTED: uncharacterized protein LOC102601... 137 1e-31
emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera] 135 7e-31
emb|CAN61851.1| hypothetical protein VITISV_036278 [Vitis vinifera] 104 5e-30
gb|AAR96002.1| retrotransposon-like protein [Musa acuminata] 129 2e-29
>emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera]
Length = 788
Score = 146 bits (369), Expect(2) = 2e-46
Identities = 75/150 (50%), Positives = 99/150 (66%), Gaps = 8/150 (5%)
Frame = +3
Query: 312 KDTIATISDGDFIVISVCDQYCFSFTSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLV 491
KD A S+GD I I VCD C + QD+ WVVDT S+H T ++DFF+SY G G V
Sbjct: 132 KDIAAVASNGDTINI-VCDDACVNLACQDSTWVVDTTTSFHITARRDFFSSYTSGSFGWV 190
Query: 492 RMGNEDTSTI--------ENNIGCKLVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGC 647
+MGNE I E +I CKLVLK+V+H ++R +LIS GKLD+EG+ +H G G
Sbjct: 191 KMGNEAKCEIIGMRDVELETSIACKLVLKDVKHVLEMRFSLISVGKLDDEGYHSHLGKGK 250
Query: 648 WEVTKGSLVVARGKKCCILYKLQTQLYEGE 737
W++TKGSL++ARGKK LYK + +L +GE
Sbjct: 251 WKLTKGSLLLARGKKNNTLYKTEARLVKGE 280
Score = 67.8 bits (164), Expect(2) = 2e-46
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Frame = +2
Query: 2 ETLVVSPTNFASDGIVTMSQVTSSLLNEETRRNSLG-PSESEALITEHWGRSKSRKP--- 169
ETLVVS +N +G++T++ V ++ NEE +R LG S +EAL+TE GRSKSRKP
Sbjct: 23 ETLVVSLSNSTPNGVITINMVKDNMFNEEAKRKKLGISSNTEALVTERRGRSKSRKPSSD 82
Query: 170 FNLEXXXXXXXXXXXIICYNFRMSGHMKRDC 262
+N + I C GH+KR+C
Sbjct: 83 YNCDKSRGKSKSQKDIKCLYCDKPGHIKREC 113
>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 146 bits (368), Expect(3) = 2e-46
Identities = 73/162 (45%), Positives = 105/162 (64%), Gaps = 8/162 (4%)
Frame = +3
Query: 315 DTIATISDGDFIVISVCDQYCFSFTSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLVR 494
D +AT + DF++ V D +F Q++ WV+D AS HATPQKDFFTSY GD G VR
Sbjct: 244 DQVAT-TISDFLI--VYDSDVVNFACQESXWVIDXGASIHATPQKDFFTSYTSGDFGSVR 300
Query: 495 MGNEDTST--------IENNIGCKLVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGCW 650
MGN+ ++ +E + G L LKNV+H PD+R+NLIS GKLD+EGF N F + W
Sbjct: 301 MGNDGSAKAIGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFCNTFRDSQW 360
Query: 651 EVTKGSLVVARGKKCCILYKLQTQLYEGEVNTMEKDPFTDLW 776
++T+GS+V+A+G K LY +Q ++ + +N ++ D +LW
Sbjct: 361 KLTRGSMVIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELW 402
Score = 61.2 bits (147), Expect(3) = 2e-46
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +2
Query: 2 ETLVVSPTNFASDGIVTMSQVTSSLLNEETRRNSLGPS-ESEALITEHWGRSKSRKPFNL 178
ET S +N A DGI+ M V S +LNEE RR S G S +S L+ GRSKSR P N
Sbjct: 133 ETFRTSLSNSAPDGIMNMDLVKSCVLNEEMRRKSQGSSSQSNVLVIXKXGRSKSRGPKNR 192
Query: 179 EXXXXXXXXXXXIICYNFRMSGHMKRDCSQ 268
+ + C+ + GH+K+ C Q
Sbjct: 193 DRSKSKTNKFANVECHYCHLKGHIKKYCRQ 222
Score = 27.3 bits (59), Expect(3) = 2e-46
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +1
Query: 760 HLPICGLSEKSLQTLAKKQILFDMKVVGLHTRSLFFCSCCLDG 888
H + +SEK L LAKK +L MK SL C+ CL G
Sbjct: 403 HNKLGHMSEKGLMILAKKNLLXGMK-----KGSLKRCAHCLAG 440
>emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera]
Length = 903
Score = 139 bits (349), Expect(3) = 3e-44
Identities = 70/162 (43%), Positives = 102/162 (62%), Gaps = 8/162 (4%)
Frame = +3
Query: 315 DTIATISDGDFIVISVCDQYCFSFTSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLVR 494
D +AT + IV D +F Q+T+WV+D+ AS HATPQKDFFTSY D G V
Sbjct: 162 DRVATTTSNFLIVY---DSDVVNFACQETSWVIDSSASIHATPQKDFFTSYTSSDFGSVM 218
Query: 495 MGNEDTST--------IENNIGCKLVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGCW 650
MGN+ ++ +E + G L+LKNV+H P++ +NLIS KLD+EGF N F + W
Sbjct: 219 MGNDGSAKAIGMRDVCLETSNGTMLILKNVKHIPNICMNLISTSKLDDEGFCNIFRDSQW 278
Query: 651 EVTKGSLVVARGKKCCILYKLQTQLYEGEVNTMEKDPFTDLW 776
++T+GS+VVA+GKK LY +Q ++ + +N ++ D +LW
Sbjct: 279 KLTRGSMVVAKGKKRSSLYLMQARVIDSSINVVDDDITIELW 320
Score = 63.9 bits (154), Expect(3) = 3e-44
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +2
Query: 2 ETLVVSPTNFASDGIVTMSQVTSSLLNEETRRNSLGPS-ESEALITEHWGRSKSRKPFNL 178
ET S +N DG + M+ V S +LNEE RR S G S +S+ L+TE GRSKSR P N
Sbjct: 51 ETFRTSLSNSTPDGTMNMNLVKSCVLNEEMRRKSHGSSSQSDVLVTEKMGRSKSRGPKNR 110
Query: 179 EXXXXXXXXXXXIICYNFRMSGHMKRDCSQ 268
+ + C+ + GH+++ CSQ
Sbjct: 111 DRSKSKTNKFANVECHYCHLKGHIRKYCSQ 140
Score = 24.6 bits (52), Expect(3) = 3e-44
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 760 HLPICGLSEKSLQTLAKKQILFDMK 834
H + +SEK L LAKK +L MK
Sbjct: 321 HNRLSHMSEKGLMILAKKNLLSGMK 345
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 140 bits (353), Expect(2) = 2e-42
Identities = 75/158 (47%), Positives = 100/158 (63%), Gaps = 8/158 (5%)
Frame = +3
Query: 327 TISDGDFIVISVCDQYCFSFTSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLVRMGNE 506
T S G+F V V D + T+Q+ WV+D+ A+ HATP+++ F+SY LGD G V+MGN
Sbjct: 268 TNSFGEFNV--VYDDDIINLTTQEMTWVIDSGATIHATPRRELFSSYTLGDFGRVKMGNA 325
Query: 507 DTSTI--------ENNIGCKLVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGCWEVTK 662
+ ST+ E G KL+L++VRH PD+RLNLIS KLDEEG+ N F NG W++TK
Sbjct: 326 NFSTVVGKGDVCLETMNGMKLLLRDVRHVPDMRLNLISVDKLDEEGYCNTFHNGQWKLTK 385
Query: 663 GSLVVARGKKCCILYKLQTQLYEGEVNTMEKDPFTDLW 776
GSL+VARG K LY Q + + +N E D LW
Sbjct: 386 GSLMVARGTKQSKLYVTQASISQQVINVAENDSNIKLW 423
Score = 60.5 bits (145), Expect(2) = 2e-42
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Frame = +2
Query: 2 ETLVVSPTNFASDGIVTMSQVTSSLLNEETRRNSLG--PSESEALITEHWGRSKSRKPFN 175
ETL VS TN A +G+V M V S +LNEE RR S G S+SE L GRS+++ N
Sbjct: 155 ETLKVSITNSAPNGVVNMETVKSGILNEEMRRRSQGTSSSQSEVLAVTTRGRSQNKSQSN 214
Query: 176 LEXXXXXXXXXXXIICYNFRMSGHMKRDCSQ 268
+ + C+ + GH+KR C Q
Sbjct: 215 RDKSRGKSNKFANVECHYCKKKGHIKRFCRQ 245
>emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera]
Length = 649
Score = 139 bits (349), Expect(2) = 6e-42
Identities = 70/142 (49%), Positives = 98/142 (69%), Gaps = 8/142 (5%)
Frame = +3
Query: 315 DTIATISDGDFIVISVCDQYCFSFTSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLVR 494
D +AT + DF++ V D +F+ Q+T+WV+D+ AS HATP+KDFFTSY GD G VR
Sbjct: 220 DRVAT-TISDFLI--VYDSDVVNFSCQETSWVIDSGASIHATPRKDFFTSYTSGDFGSVR 276
Query: 495 MGNEDTST--------IENNIGCKLVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGCW 650
MGN+ ++ +E + G L+LKNV+H PD+ +NLIS GKLD EGF N F + W
Sbjct: 277 MGNDGSAKAIGMGDVHLETSNGIVLILKNVKHIPDISMNLISTGKLDNEGFCNTFRDSQW 336
Query: 651 EVTKGSLVVARGKKCCILYKLQ 716
++T+GS+V+A+GKKC LY +Q
Sbjct: 337 KLTRGSMVIAKGKKCSSLYFMQ 358
Score = 60.1 bits (144), Expect(2) = 6e-42
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +2
Query: 2 ETLVVSPTNFASDGIVTMSQVTSSLLNEETRRNSLGP-SESEALITEHWGRSKSRKPFNL 178
ET S + A DG + M V S +LNEE RR GP S+S+ L+TE GRSKSR P N
Sbjct: 109 ETFRTSLSISAPDGTMNMDLVKSCVLNEEMRRKLQGPPSQSDVLVTEKRGRSKSRGPKNK 168
Query: 179 EXXXXXXXXXXXIICYNFRMSGHMKRDCSQ 268
+ + C+ + GH+++ C Q
Sbjct: 169 DRSKSKTNKFVNVECHYCHLKGHIRKYCRQ 198
>emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera]
Length = 1183
Score = 135 bits (339), Expect(3) = 6e-41
Identities = 70/162 (43%), Positives = 100/162 (61%), Gaps = 8/162 (4%)
Frame = +3
Query: 315 DTIATISDGDFIVISVCDQYCFSFTSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLVR 494
D +AT + DF++ V D +F Q+T+WV+D+ A HATPQKDFFTSY GD G V
Sbjct: 266 DRVATTTS-DFLI--VYDSDVVNFACQETSWVIDSGALIHATPQKDFFTSYTFGDFGSVX 322
Query: 495 MGNEDTST--------IENNIGCKLVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGCW 650
M NE ++ +E + G L+LKNV+H PD+R IS GKLD+EGF N F + W
Sbjct: 323 MDNEGSAKAIGMRYVRLETSNGTMLILKNVKHIPDIR---ISTGKLDDEGFYNTFHDSQW 379
Query: 651 EVTKGSLVVARGKKCCILYKLQTQLYEGEVNTMEKDPFTDLW 776
++T GS+V +GKKC L +Q ++ + +N ++ D +LW
Sbjct: 380 KLTIGSMVATKGKKCSSLCLMQARVIDSSINAVDDDSIVELW 421
Score = 54.7 bits (130), Expect(3) = 6e-41
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +2
Query: 2 ETLVVSPTNFASDGIVTMSQVTSSLLNEETRRNSLGPSES-EALITEHWGRSKSRKPFNL 178
ET S +N A DG + M V S +LNEE R S G S + L+T+ RSKSR P N
Sbjct: 155 ETFRTSLSNSAPDGTMNMDLVKSCVLNEEMGRKSQGSSSQLDVLVTKKKERSKSRGPNNR 214
Query: 179 EXXXXXXXXXXXIICYNFRMSGHMKRDCSQ 268
+ + C+ F + GH+ + C Q
Sbjct: 215 DRRKSKTNKFANVECHYFHLKGHIVKYCRQ 244
Score = 26.6 bits (57), Expect(3) = 6e-41
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 760 HLPICGLSEKSLQTLAKKQILFDMKVVGLHTRSLFFCSCCL 882
H + +SEK L LAKK +L MK SL C+ CL
Sbjct: 422 HNKLGHMSEKGLMILAKKNLLSGMK-----KGSLKMCAHCL 457
>emb|CAN59934.1| hypothetical protein VITISV_001876 [Vitis vinifera]
Length = 1392
Score = 123 bits (308), Expect(3) = 3e-39
Identities = 64/163 (39%), Positives = 95/163 (58%), Gaps = 8/163 (4%)
Frame = +3
Query: 312 KDTIATISDGDFIVISVCDQYCFSFTSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLV 491
+D + DF++ V D +F Q+T+WV+D+ AS HATP+KDFFTSY GD G V
Sbjct: 132 EDDQVVTTTSDFLI--VYDSDVVNFACQETSWVIDSGASIHATPRKDFFTSYTSGDFGSV 189
Query: 492 RMGNEDTST--------IENNIGCKLVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGC 647
RMGN+ ++ +E + G L LKNV+H PD+R+NLIS GKLD+EGF N F +
Sbjct: 190 RMGNDGSAKAIGMGDVCLETSNGTMLTLKNVKHIPDIRMNLISIGKLDDEGFCNTFRDSQ 249
Query: 648 WEVTKGSLVVARGKKCCILYKLQTQLYEGEVNTMEKDPFTDLW 776
W++T+GS+ ++ + +N ++ D +LW
Sbjct: 250 WKLTRGSM---------------ARVIDSSINVVDDDSTFELW 277
Score = 60.8 bits (146), Expect(3) = 3e-39
Identities = 40/98 (40%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Frame = +2
Query: 2 ETLVVSPTNFASDGIVTMSQVTSSLLNEETRRNSLGPS-ESEALITEHWGRSKSRKPFNL 178
ET S N A DGI+ M V S +LNEE RR S G S +S L+TE GRSKSR P N
Sbjct: 23 ETFRTSLFNLALDGIMNMDLVKSCVLNEEMRRKSQGSSSQSNVLVTEKRGRSKSRGPKNR 82
Query: 179 EXXXXXXXXXXXIICYNFRMSGH-------MKRDCSQE 271
+ + C+ + GH +KRD QE
Sbjct: 83 DRSKRKTNKFANVECHYCHLKGHIKKYYRQLKRDMKQE 120
Score = 26.6 bits (57), Expect(3) = 3e-39
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1
Query: 778 LSEKSLQTLAKKQILFDMKVVGLHTRSLFFCSCCLDG 888
+SEK L LAKK +L MK SL C+ CL G
Sbjct: 284 MSEKGLMILAKKNLLSGMK-----KGSLKRCAHCLAG 315
>emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]
Length = 1302
Score = 146 bits (369), Expect(3) = 1e-38
Identities = 72/162 (44%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Frame = +3
Query: 315 DTIATISDGDFIVISVCDQYCFSFTSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLVR 494
D +AT + DF++ V D +F Q+T+WV+D+ AS HATP+KDFFTSY GD G VR
Sbjct: 131 DQVATTTS-DFLI--VYDSDVVNFACQETSWVIDSGASIHATPRKDFFTSYTSGDFGSVR 187
Query: 495 MGNEDTST--------IENNIGCKLVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGCW 650
MGN+ ++ +E + G L LKNV+H PD+R+NLIS GKLD+EGF N F + W
Sbjct: 188 MGNDGSAKAIGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFXNTFRDSQW 247
Query: 651 EVTKGSLVVARGKKCCILYKLQTQLYEGEVNTMEKDPFTDLW 776
++T+GS+ +A+G K LY +Q ++ + +N ++ D +LW
Sbjct: 248 KLTRGSMXIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELW 289
Score = 35.0 bits (79), Expect(3) = 1e-38
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +2
Query: 86 ETRRNSLGPSESEALITEHWGRSKSRKPFNLEXXXXXXXXXXXIICYNFRMSGHMKRDCS 265
ET R SL S + +TE G SKSR P N + + C+ + GH+K+ C
Sbjct: 51 ETFRTSLSNSXPD--VTEKRGXSKSRGPKNRDRSKSKTNKXANVECHYCHLKGHIKKYCR 108
Query: 266 Q 268
Q
Sbjct: 109 Q 109
Score = 26.6 bits (57), Expect(3) = 1e-38
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1
Query: 778 LSEKSLQTLAKKQILFDMKVVGLHTRSLFFCSCCLDG 888
+SEK L LAKK +L MK SL C+ CL G
Sbjct: 296 MSEKGLMILAKKNLLSXMK-----KGSLKRCAHCLAG 327
>emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera]
Length = 761
Score = 145 bits (365), Expect(2) = 2e-38
Identities = 77/163 (47%), Positives = 98/163 (60%), Gaps = 8/163 (4%)
Frame = +3
Query: 312 KDTIATISDGDFIVISVCDQYCFSFTSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLV 491
KD AT SD D I+ VCD C + D+ WVVDT AS+H KDFF S+ G V
Sbjct: 91 KDIGATTSDVDMII--VCDDACVNLACXDSTWVVDTTASFHIIAHKDFFFSHTGDSFGWV 148
Query: 492 RMGNEDTSTI--------ENNIGCKLVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGC 647
RMGN I E +I CKLV+K VRH P++ +LIS KLD+EG+ +H G
Sbjct: 149 RMGNGAKCEIVGMGDVELETSIRCKLVMKYVRHVPEMHFSLISVRKLDDEGYHSHLGESK 208
Query: 648 WEVTKGSLVVARGKKCCILYKLQTQLYEGEVNTMEKDPFTDLW 776
W+ T GSLV+ARGKK YK++ +L +GEVN +E + FT LW
Sbjct: 209 WKXTXGSLVLARGKKNNTFYKIEARLVKGEVNIVENEAFTXLW 251
Score = 42.0 bits (97), Expect(2) = 2e-38
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +2
Query: 62 VTSSLLNEETRRNSLG-PSESEALITEHWGRSKSRKP---FNLEXXXXXXXXXXXIICYN 229
V ++ NEE RR LG S ++ L+ GRSK RKP +N + I C+
Sbjct: 2 VKDNMXNEEARRKELGISSNTKTLVXXRXGRSKIRKPSSDYNRDKSRGKSKSKKEIKCFY 61
Query: 230 FRMSGHMKRDC 262
+ S H+KR C
Sbjct: 62 YGKSWHIKRKC 72
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 117 bits (294), Expect(3) = 2e-37
Identities = 60/138 (43%), Positives = 86/138 (62%), Gaps = 8/138 (5%)
Frame = +3
Query: 387 TSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLVRMGNEDTST--------IENNIGCK 542
T+ D V D+D DFFTSY GD G VRMGN+D++ +E + G
Sbjct: 176 TTSDFFIVYDSDV--------DFFTSYTSGDFGSVRMGNDDSAKAIGMRNVRLETSNGTM 227
Query: 543 LVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGCWEVTKGSLVVARGKKCCILYKLQTQ 722
L LKNV+H PD+R+NLIS GKLD+EGF N F + W++T+GS+V+A+G K LY +QT+
Sbjct: 228 LTLKNVKHIPDIRMNLISTGKLDDEGFYNIFRDSQWKLTRGSMVIAKGNKSSSLYLMQTR 287
Query: 723 LYEGEVNTMEKDPFTDLW 776
+ + +N ++ D +LW
Sbjct: 288 VIDSSINAVDDDSTFELW 305
Score = 60.1 bits (144), Expect(3) = 2e-37
Identities = 36/90 (40%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 2 ETLVVSPTNFASDGIVTMSQVTSSLLNEETRRNSLGPS-ESEALITEHWGRSKSRKPFNL 178
ET S N DGI+ M V S +LNEE RR S G S +S L+ E GRSKSR P N
Sbjct: 60 ETFRTSLFNSTPDGIMNMDLVKSCVLNEEMRRKSQGSSSQSSVLVIEKRGRSKSRGPKNR 119
Query: 179 EXXXXXXXXXXXIICYNFRMSGHMKRDCSQ 268
+ + C+ + GH+K+ C Q
Sbjct: 120 DRSKNKTNKFANVECHYCHLKGHIKKYCRQ 149
Score = 26.6 bits (57), Expect(3) = 2e-37
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1
Query: 778 LSEKSLQTLAKKQILFDMKVVGLHTRSLFFCSCCLDG 888
+SEK L LAKK +L MK SL C+ CL G
Sbjct: 312 MSEKGLMILAKKNLLSGMK-----KGSLKRCAHCLAG 343
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 156 bits (394), Expect = 2e-35
Identities = 75/150 (50%), Positives = 102/150 (68%), Gaps = 8/150 (5%)
Frame = +3
Query: 351 VISVCDQYCFSFTSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLVRMGNED------- 509
++ CD + +T W+VD+ A+YH TP+K+FFTSY GD G +RMGN+
Sbjct: 271 LLVACDDNVINVACHETTWIVDSGAAYHVTPRKEFFTSYTPGDFGELRMGNDGQVKVTGT 330
Query: 510 -TSTIENNIGCKLVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGCWEVTKGSLVVARG 686
T +E + G KLVLKNV+HAPD+RLNLIS GKLD++GF FG+G W++TKGSLVVARG
Sbjct: 331 GTVCLETSNGTKLVLKNVKHAPDIRLNLISTGKLDDDGFCCFFGDGHWKITKGSLVVARG 390
Query: 687 KKCCILYKLQTQLYEGEVNTMEKDPFTDLW 776
K LY LQ+ + + VN +EK+ ++LW
Sbjct: 391 NKSSNLYSLQSSVSDDSVNVVEKECASELW 420
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 136 bits (343), Expect(3) = 8e-35
Identities = 68/163 (41%), Positives = 100/163 (61%), Gaps = 9/163 (5%)
Frame = +3
Query: 315 DTIATISDGDFIVISVCDQY-CFSFTSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLV 491
+T A + + D +V+ + ++ C + ++ WVVDT AS+HATP +D F Y GD G V
Sbjct: 263 NTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTV 322
Query: 492 RMGNEDTSTI--------ENNIGCKLVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGC 647
+MGN S I + N+GC LVLK+VRH PDLR+NLIS LD +G+ ++F N
Sbjct: 323 KMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQK 382
Query: 648 WEVTKGSLVVARGKKCCILYKLQTQLYEGEVNTMEKDPFTDLW 776
W +TKGSLV+A+G LY+ ++ +GE+N + + DLW
Sbjct: 383 WRLTKGSLVIAKGVARGTLYRTNAEICQGELNAAQDEISVDLW 425
Score = 36.6 bits (83), Expect(3) = 8e-35
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Frame = +2
Query: 47 VTMSQVTSSLL-NEETRRNSLGPSESEALITEHWGRSKSRKPFNL-----EXXXXXXXXX 208
+ + VTS+LL NE+ R+ ++ +ALITE GRS R N
Sbjct: 170 IELKDVTSALLLNEKMRKKP--ENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKS 227
Query: 209 XXIICYNFRMSGHMKRDC 262
CYN GH KRDC
Sbjct: 228 RVRNCYNCNQPGHFKRDC 245
Score = 22.3 bits (46), Expect(3) = 8e-35
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 778 LSEKSLQTLAKKQIL 822
+SEK LQ LAKK ++
Sbjct: 432 MSEKGLQILAKKSLI 446
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 140 bits (353), Expect(2) = 3e-34
Identities = 69/163 (42%), Positives = 101/163 (61%), Gaps = 9/163 (5%)
Frame = +3
Query: 315 DTIATISDGDFIVISVCDQY-CFSFTSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLV 491
+T A + + D +V+ + ++ C ++ WVVDT ASYHATP +D F Y GD+G V
Sbjct: 264 NTAAMVQNNDDVVLLINEEEECMHLAGTESEWVVDTAASYHATPVRDLFCRYVAGDYGNV 323
Query: 492 RMGNEDTSTI--------ENNIGCKLVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGC 647
+MGN S I + N+GC LVLK+VRH PDLR+NLIS LD++G+ N+F N
Sbjct: 324 KMGNTSYSKIAGIGDICFKTNVGCTLVLKDVRHVPDLRMNLISGIALDQDGYENYFANQK 383
Query: 648 WEVTKGSLVVARGKKCCILYKLQTQLYEGEVNTMEKDPFTDLW 776
W +TKG+LV+A+G LY+ ++ +GE+N ++ DLW
Sbjct: 384 WRLTKGALVIAKGVARGTLYRTNAEICQGELNAAHEENSADLW 426
Score = 32.7 bits (73), Expect(2) = 3e-34
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
Frame = +2
Query: 47 VTMSQVTSSLL-NEETRRNSLGPSESEALITEHWGRSKSRKPFNL-----EXXXXXXXXX 208
+ + VTS+LL NE+ R+ + + ITE GRS R N
Sbjct: 171 IQLKDVTSALLLNEKMRKKP--ENHGQVFITESRGRSYQRSSSNYGRSGARGKSKVRSKS 228
Query: 209 XXIICYNFRMSGHMKRDC 262
CYN GH KRDC
Sbjct: 229 KARNCYNCDQPGHFKRDC 246
>emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]
Length = 1204
Score = 122 bits (306), Expect(3) = 1e-33
Identities = 64/154 (41%), Positives = 96/154 (62%)
Frame = +3
Query: 315 DTIATISDGDFIVISVCDQYCFSFTSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLVR 494
D +AT + DF++ V D +F +T+WV+D+ AS HAT +KDFFTSY +
Sbjct: 229 DQVATTTS-DFLI--VYDSDVVNFACXETSWVIDSGASIHATLRKDFFTSYTSAK--AIG 283
Query: 495 MGNEDTSTIENNIGCKLVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGCWEVTKGSLV 674
MG+ +E + G L LKNV+H PD+R+NLIS KLD+EGF N F + W +T+GS+V
Sbjct: 284 MGDV---RLETSNGTMLTLKNVKHIPDIRMNLISTRKLDDEGFCNTFRDSQWNLTRGSMV 340
Query: 675 VARGKKCCILYKLQTQLYEGEVNTMEKDPFTDLW 776
+A+G K LY +Q ++ + +N ++ D +LW
Sbjct: 341 IAKGNKSSSLYLMQARVIDSNINAVDDDSTFELW 374
Score = 42.7 bits (99), Expect(3) = 1e-33
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 38 DGIVTMSQVTSSLLNEETRRNSLGPS-ESEALITEHWGRSKSRKPFNLEXXXXXXXXXXX 214
D T S+ +E RR S G S +S L+TE GRSKS+ P N +
Sbjct: 130 DSWETFRTSLSNSAPDEMRRKSQGSSSQSNVLVTEKRGRSKSKGPKNRDRSKSKTNKFAN 189
Query: 215 IICYNFRMSGHMKRDCSQ 268
+ C+ + GH+K+ C Q
Sbjct: 190 VECHYCHLKGHIKKYCHQ 207
Score = 26.6 bits (57), Expect(3) = 1e-33
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1
Query: 778 LSEKSLQTLAKKQILFDMKVVGLHTRSLFFCSCCLDG 888
+SEK L LAKK +L MK SL C+ CL G
Sbjct: 381 MSEKGLMILAKKNLLSGMK-----KGSLKRCAHCLAG 412
>emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera]
Length = 776
Score = 126 bits (316), Expect(2) = 2e-33
Identities = 68/163 (41%), Positives = 91/163 (55%), Gaps = 8/163 (4%)
Frame = +3
Query: 312 KDTIATISDGDFIVISVCDQYCFSFTSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLV 491
KD + SDGD + VCD C + QD+ WVVDT S+H T KDFF+SY G G V
Sbjct: 345 KDIVVVASDGDTTI--VCDDACVNLACQDSTWVVDTAMSFHITTHKDFFSSYTSGSFGWV 402
Query: 492 RMGNEDTSTI--------ENNIGCKLVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGC 647
RMGNE I E +IGCK+V K+VRH P++ +LIS GK D+EG+ +H
Sbjct: 403 RMGNEAKCEIVGMRDVELETSIGCKMVFKDVRHVPEMCFSLISIGKFDDEGYHSHL---- 458
Query: 648 WEVTKGSLVVARGKKCCILYKLQTQLYEGEVNTMEKDPFTDLW 776
G++ LYK + +L +GEVN +E + T+LW
Sbjct: 459 ------------GEEKNTLYKTKARLVKGEVNIVENEASTELW 489
Score = 44.7 bits (104), Expect(2) = 2e-33
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +2
Query: 77 LNEETRRNSLGPSES-EALITEHWGRSKSRKP---FNLEXXXXXXXXXXXIICYNFRMSG 244
L++E RR LG S + EAL+ E RSKSRKP +N + I C+++ G
Sbjct: 261 LDDEARRKKLGISSNIEALVIERQRRSKSRKPSNDYNCDKSRGKSKSLKEIKCFHYDKLG 320
Query: 245 HMKRDCSQ 268
H+KR C +
Sbjct: 321 HIKRKCKK 328
>emb|CAN71391.1| hypothetical protein VITISV_038145 [Vitis vinifera]
Length = 579
Score = 149 bits (375), Expect = 2e-33
Identities = 76/150 (50%), Positives = 95/150 (63%), Gaps = 8/150 (5%)
Frame = +3
Query: 312 KDTIATISDGDFIVISVCDQYCFSFTSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLV 491
KD DGD I+I CD C + QD+ WVVDT S+H T +DFF+SY G G V
Sbjct: 139 KDIAXVAFDGDAIII--CDDTCVNLACQDSTWVVDTATSFHITAHRDFFSSYTNGSFGWV 196
Query: 492 RMGNEDTSTI--------ENNIGCKLVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGC 647
MGNE I E IGCKLVLK+VRH P +R +LIS GKLD+EG+ +H G G
Sbjct: 197 XMGNEAKCEIVGMGDVDLETXIGCKLVLKDVRHVPXMRFSLISVGKLDDEGYHSHLGEGK 256
Query: 648 WEVTKGSLVVARGKKCCILYKLQTQLYEGE 737
W++TKGSLV+ RGKK LYK++ +L +GE
Sbjct: 257 WKITKGSLVLXRGKKNNTLYKIEVRLVKGE 286
>ref|XP_006354297.1| PREDICTED: uncharacterized protein LOC102601066 [Solanum tuberosum]
Length = 1135
Score = 137 bits (346), Expect(2) = 1e-31
Identities = 67/163 (41%), Positives = 102/163 (62%), Gaps = 8/163 (4%)
Frame = +3
Query: 312 KDTIATISDGDFIVISVCDQYCFSFTSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLV 491
++ + +++ D +V CD+ + +++W VD+ A+ H TP K+ F+SY G+ G++
Sbjct: 667 ENRVVVVANDDLLVS--CDENAVNLVRDESSWFVDSGATSHVTPNKELFSSYTPGNFGML 724
Query: 492 RMGNED--------TSTIENNIGCKLVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGC 647
+MGN T +E+N G KLVL NV+HAPD+RLNLIS G LD+EG++N G
Sbjct: 725 KMGNNHEVAVLGIGTVCLESNNGSKLVLNNVKHAPDVRLNLISVGYLDDEGYVNTLGADQ 784
Query: 648 WEVTKGSLVVARGKKCCILYKLQTQLYEGEVNTMEKDPFTDLW 776
W++T+GS+VVARG K LY Q ++ G VN +E D + LW
Sbjct: 785 WKLTRGSMVVARGDKLSNLYVFQGSIFRGSVNLVENDTSSLLW 827
Score = 26.9 bits (58), Expect(2) = 1e-31
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 760 HLPICGLSEKSLQTLAKKQILFDMKVVGLHTRSLFFCSCCLDG 888
H + +SEK + LAKK +L+ +K L+ C CL G
Sbjct: 828 HRRLSHMSEKGMNNLAKKNLLYGVKQAKLNK-----CVHCLAG 865
>emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]
Length = 1017
Score = 135 bits (339), Expect(2) = 7e-31
Identities = 68/162 (41%), Positives = 100/162 (61%), Gaps = 8/162 (4%)
Frame = +3
Query: 315 DTIATISDGDFIVISVCDQYCFSFTSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLVR 494
D +AT + DF++ V D +F Q+T+WV+D+ AS HATP+KDFFTSY D G VR
Sbjct: 18 DQVATTTS-DFLI--VYDSDVVNFACQETSWVIDSGASIHATPRKDFFTSYTFSDFGSVR 74
Query: 495 MGNEDTST--------IENNIGCKLVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGCW 650
MGN+ + +E + G L LKNV+H PD+R+NLIS KLD+EG N F + W
Sbjct: 75 MGNDGLAKAIGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTRKLDDEGLCNTFRDSQW 134
Query: 651 EVTKGSLVVARGKKCCILYKLQTQLYEGEVNTMEKDPFTDLW 776
++T+GS+V+ + K LY +Q ++ + +N ++ D LW
Sbjct: 135 KLTRGSMVITKENKSSSLYLMQVRVIDSSINAVDDDSTFKLW 176
Score = 26.9 bits (58), Expect(2) = 7e-31
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 760 HLPICGLSEKSLQTLAKKQILFDMKVVGLHTRSLFFCSCCLDG 888
H + +SEK L +AKK +L MK SL C+ CL G
Sbjct: 177 HNRLSHMSEKGLMIMAKKNLLSGMK-----KGSLKRCAHCLGG 214
>emb|CAN61851.1| hypothetical protein VITISV_036278 [Vitis vinifera]
Length = 973
Score = 104 bits (259), Expect(2) = 5e-30
Identities = 60/144 (41%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Frame = +3
Query: 315 DTIATISDGDFIVISVCDQYCFSFTSQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLVR 494
D +AT + DF++I D +F Q+TNWV+D+ AS HATP+K+FFTSY GD G VR
Sbjct: 199 DRVATTTS-DFLIIY--DSDVVNFARQETNWVIDSGASIHATPRKNFFTSYTFGDFGSVR 255
Query: 495 MGNEDTS--------TIENNIGCKLVLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGCW 650
MGN+ + +E + G L+LKNV+H PD+ +NLIS
Sbjct: 256 MGNDGLAKAIGMGDVRLETSNGIVLILKNVKHIPDIHMNLIST----------------- 298
Query: 651 EVTKGSLVVARGKKCCILYKLQTQ 722
GS+VVA+GKKC LY +Q +
Sbjct: 299 ----GSMVVAKGKKCSSLYLMQAR 318
Score = 54.7 bits (130), Expect(2) = 5e-30
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +2
Query: 2 ETLVVSPTNFASDGIVTMSQVTSSLLNEETRRNSLGPS-ESEALITEHWGRSKSRKPFNL 178
ET S +N A DG + M V +LNEE RR S G S +S+ L+ E GRSKSR P N
Sbjct: 88 ETFRTSLSNLAPDGTMNMDLVKICVLNEEMRRKSQGSSSQSDVLVIEKKGRSKSRGPKNR 147
Query: 179 EXXXXXXXXXXXIICYNFRMSGHMKRDCSQ 268
+ + C + H+++ C Q
Sbjct: 148 DRSKSKTNKFVNVECLYCHLKWHIRKYCRQ 177
>gb|AAR96002.1| retrotransposon-like protein [Musa acuminata]
Length = 521
Score = 129 bits (323), Expect(2) = 2e-29
Identities = 62/137 (45%), Positives = 88/137 (64%), Gaps = 8/137 (5%)
Frame = +3
Query: 390 SQDTNWVVDTDASYHATPQKDFFTSYNLGDHGLVRMGNEDTSTI--------ENNIGCKL 545
SQD NW +D+ +H T DFF SY +GD G VRMGN T I E +IG KL
Sbjct: 191 SQDNNWAIDSCVLFHVTSHGDFFRSYTVGDFGNVRMGNNGTYKIMGIGDICLETSIGSKL 250
Query: 546 VLKNVRHAPDLRLNLISAGKLDEEGFINHFGNGCWEVTKGSLVVARGKKCCILYKLQTQL 725
+LK+VR+ P++ LNLIS +L++E F ++F W++TKGSL++ARG K Y L+ +L
Sbjct: 251 ILKDVRYVPNICLNLISTSRLNDEDFAHYFDESKWKLTKGSLIMARGNKLNSFYVLEAKL 310
Query: 726 YEGEVNTMEKDPFTDLW 776
++GE+N ++K DLW
Sbjct: 311 HKGEINAIQKGESIDLW 327
Score = 28.1 bits (61), Expect(2) = 2e-29
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 760 HLPICGLSEKSLQTLAKKQILFDMKV 837
H + +SEK LQTLA+KQ L +++V
Sbjct: 328 HKRLGHISEKELQTLARKQFLPELRV 353