BLASTX nr result

ID: Akebia27_contig00032189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00032189
         (633 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301858.1| PREDICTED: pentatricopeptide repeat-containi...    61   2e-07
ref|XP_007202196.1| hypothetical protein PRUPE_ppa018835mg [Prun...    59   1e-06
ref|XP_004512217.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    59   2e-06

>ref|XP_004301858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Fragaria vesca subsp. vesca]
          Length = 704

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
 Frame = -1

Query: 531 VFNIHLGIGIHTAKQILKLNTEDGTTVNLLSNICAEAGKWAAIIEI-RKIKETQVRHHPE 355
           V N +L IG+H A+Q+LK++ ED  T  LLSN+ A AGKW  ++EI RKIKE  +   P 
Sbjct: 593 VINKNLEIGVHAAEQVLKVDAEDSATHILLSNLYASAGKWDEVVEIRRKIKELTLEKDPG 652

Query: 354 LS 349
           LS
Sbjct: 653 LS 654


>ref|XP_007202196.1| hypothetical protein PRUPE_ppa018835mg [Prunus persica]
           gi|462397727|gb|EMJ03395.1| hypothetical protein
           PRUPE_ppa018835mg [Prunus persica]
          Length = 654

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
 Frame = -1

Query: 531 VFNIHLGIGIHTAKQILKLNTEDGTTVNLLSNICAEAGKWAAIIEI-RKIKETQVRHHPE 355
           V N +L +G+H A+Q+L L+ ED  T+ LLSN+ A AGKW +++E+ RKIK   +   P 
Sbjct: 543 VINKNLKVGVHAAEQVLSLDAEDSATLVLLSNLYAAAGKWGSVVEMRRKIKVLTLEKDPG 602

Query: 354 LS 349
           LS
Sbjct: 603 LS 604


>ref|XP_004512217.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g50420-like [Cicer arietinum]
          Length = 966

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
 Frame = -1

Query: 531  VFNIHLGIGIHTAKQILKLNTEDGTTVNLLSNICAEAGKWAAIIEIRK-IKETQVRHHPE 355
            V N  L +G+H A+++L+LN EDG T+ LLSN+ A AG+W  + EIR+ ++   +   P 
Sbjct: 850  VLNKSLKVGVHAAEEVLRLNAEDGPTLVLLSNLYAAAGRWDEVAEIRRNMRGLMMEKDPG 909

Query: 354  LS*TK----IHELTSDEQYH 307
            LS  +    IH  +S +Q H
Sbjct: 910  LSWIEAKNDIHVFSSGDQSH 929


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