BLASTX nr result

ID: Akebia27_contig00031952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00031952
         (307 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB66983.1| hypothetical protein L484_004908 [Morus notabilis]      56   5e-06
gb|AAQ73164.1| resistance protein RGC2 [Lactuca saligna]               56   5e-06

>gb|EXB66983.1| hypothetical protein L484_004908 [Morus notabilis]
          Length = 215

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 30/88 (34%), Positives = 45/88 (51%)
 Frame = +2

Query: 44  NLKVLEISSCPMLIHLFPIKLVRGLLQLQVLKVEDCENMXXXXXXXXXXXXXXXXKAVLP 223
           NL  +E+  C  L  L P  + +GL+ L+ LKV  CE+M                K++LP
Sbjct: 28  NLITIEVYRCDSLEFLLPYSIAKGLINLKHLKVYGCESMEQIIYETPTEVEETGDKSILP 87

Query: 224 QLKALELVYLPKLSNIYRRDSLFDWPSL 307
           QL  L L +LP+L++       FDWP++
Sbjct: 88  QLVDLVLSFLPELTSFCLGKYNFDWPNM 115


>gb|AAQ73164.1| resistance protein RGC2 [Lactuca saligna]
          Length = 414

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +2

Query: 44  NLKVLEISSCPMLIHLFPIKLVRGLLQLQVLKVEDCENMXXXXXXXXXXXXXXXXKAVL- 220
           NLK+L+I  C ++ H+FP   +  L QL+ L ++DC+ M                + V+ 
Sbjct: 67  NLKILKIDGCDLVEHVFPFSTLESLRQLEELMIKDCDAMKVIVKEECGGEQTATSEVVVF 126

Query: 221 PQLKALELVYLPKLSNIYRRDSLFDWPSL 307
            +L++++L+ LP L   YR  + F WPSL
Sbjct: 127 GRLRSIKLINLPDLVGFYRGMNEFRWPSL 155


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