BLASTX nr result
ID: Akebia27_contig00031843
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00031843
(691 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD96948.1| hypothetical protein [Cleome spinosa] 221 2e-55
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 212 1e-52
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 211 2e-52
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 211 2e-52
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694... 209 9e-52
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 208 1e-51
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 208 2e-51
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 206 6e-51
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 205 1e-50
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 205 1e-50
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 204 2e-50
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 204 3e-50
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 203 4e-50
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 201 1e-49
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 201 2e-49
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 201 2e-49
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 201 2e-49
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 200 3e-49
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 199 7e-49
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 199 7e-49
>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
Length = 539
Score = 221 bits (562), Expect = 2e-55
Identities = 101/220 (45%), Positives = 148/220 (67%)
Frame = -1
Query: 661 MISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCL 482
+ SP Q AF++GR + +N+LL+ E++ Y+R R +K+DLRKAFD+++W + +
Sbjct: 4 IFSPNQGAFLEGRLMVENVLLATELVHEYNRPNTSKRAMLKIDLRKAFDTVSWEFITKIM 63
Query: 481 SKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSI 302
+ P TFV W+ +C+ TPKFSVSING L GYF+G+RGLRQGDPLSPYLF++ MEVLS
Sbjct: 64 QALNLPRTFVTWVKVCMETPKFSVSINGELAGYFKGRRGLRQGDPLSPYLFIMSMEVLSR 123
Query: 301 LLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQM 122
+L ++ LHP C+ P ITHL FADD+MIF G +S ++ TL+ F SGL +
Sbjct: 124 MLDRCAAESRLSLHPKCHSPVITHLAFADDIMIFTSGETRSLLEVKNTLDSFSRASGLYL 183
Query: 121 NSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
N+ K+ +F ++G +++ A + + G LPV+YLG+ L
Sbjct: 184 NTEKTEIFLRGLNGTEASTLCAVIGFTRGYLPVRYLGVSL 223
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 212 bits (539), Expect = 1e-52
Identities = 107/229 (46%), Positives = 156/229 (68%)
Frame = -1
Query: 688 NRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSL 509
+R++++ +IS QSAF+ GR +A+N+LL+ +++ Y+ + PR +KVDL+KAFDS+
Sbjct: 542 DRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPRGMLKVDLKKAFDSV 601
Query: 508 NWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLF 329
W + L + PE F++WI CISTP F+VSINGG G+F+ +GLRQGDPLSPYLF
Sbjct: 602 RWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQGDPLSPYLF 661
Query: 328 VLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEE 149
VL ME S LL ++ + I HP + +I+HLMFADD+MIF G S I ETL++
Sbjct: 662 VLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVMIFFDGGSFSLHGICETLDD 721
Query: 148 FKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
F ++SGL++N KS L+ A ++ QL+++ A G+LP++YLGLPL
Sbjct: 722 FASWSGLKVNKDKSHLYLAGLN-QLESNANAAYGFPIGTLPIRYLGLPL 769
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 211 bits (537), Expect = 2e-52
Identities = 104/230 (45%), Positives = 150/230 (65%)
Frame = -1
Query: 691 ANRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDS 512
ANR++ V K I+ Q+AF++ R + +N+LL+ E++++YH+ R A+K+D+ KAF+S
Sbjct: 74 ANRLKMVLPKFIAGNQTAFVKDRLLIENLLLATELVKDYHKESVSSRCAIKIDISKAFNS 133
Query: 511 LNWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYL 332
+ W +++ L M FP FV WI++CIST FSV +NG L G+F+ KRGLRQG LSPYL
Sbjct: 134 VQWSFIRNILLSMDFPMEFVHWIMLCISTASFSVQVNGELVGFFQSKRGLRQGCSLSPYL 193
Query: 331 FVLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLE 152
FV+ M+VLS LL KK H C E ++THL FADDLM+ + G ++S I E +
Sbjct: 194 FVMSMDVLSKLLDQAASAKKFGYHSRCKELSLTHLSFADDLMVLSDGKVRSIDGIVEVFD 253
Query: 151 EFKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
F +SGL+++ KST++ A V + I+ Q G LPV+YLGLPL
Sbjct: 254 IFAKFSGLKISMEKSTIYLAGVTEDVYHEIQNRYQFDVGQLPVRYLGLPL 303
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 211 bits (536), Expect = 2e-52
Identities = 105/230 (45%), Positives = 148/230 (64%)
Frame = -1
Query: 691 ANRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDS 512
ANR++ + + I+ QSAF++ R + +N+LL+ E++++YH++ R A+K+D+ KAFDS
Sbjct: 194 ANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDSISARCAIKIDISKAFDS 253
Query: 511 LNWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYL 332
+ W L + L M F TF+ WI +CI+T FSV +NG L GYF+ KRGLRQG LSPYL
Sbjct: 254 VQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYL 313
Query: 331 FVLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLE 152
FV+ M+VLS +L +K HP C +THL FADDLM+ + G +S + I E +
Sbjct: 314 FVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFD 373
Query: 151 EFKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
EF SGL+++ KSTL+ A V +K I A G LPV+YLGLPL
Sbjct: 374 EFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPL 423
>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
putative protein [Arabidopsis thaliana]
Length = 1141
Score = 209 bits (531), Expect = 9e-52
Identities = 109/229 (47%), Positives = 153/229 (66%)
Frame = -1
Query: 688 NRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSL 509
+R++K+ +ISP QSAF+ GR +A+N+LL+ E++ Y+ R +KVDLRKAFDS+
Sbjct: 520 DRLQKLLSCVISPSQSAFLPGRLLAENVLLATEMVHGYNWRNISLRGMLKVDLRKAFDSV 579
Query: 508 NWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLF 329
W + L +G P F++WI CISTP F+VS+NG G+F+ +GLRQGDPLSPYLF
Sbjct: 580 RWEFIIAALLALGVPTKFINWIHQCISTPTFTVSVNGCCGGFFKSAKGLRQGDPLSPYLF 639
Query: 328 VLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEE 149
VL MEV S LL ++ + I HP ++ +I+HLMFADD+MIF G S I ETLE+
Sbjct: 640 VLAMEVFSKLLNSRFDSGYIRYHPKASDLSISHLMFADDVMIFFDGGSSSLHGICETLED 699
Query: 148 FKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
F ++SGL++N+ KS F A + Q + + A +G LP++YLGLPL
Sbjct: 700 FASWSGLKVNNDKSHFFCAGLE-QAERNSLAAYGFPQGCLPIRYLGLPL 747
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 208 bits (530), Expect = 1e-51
Identities = 102/230 (44%), Positives = 146/230 (63%)
Frame = -1
Query: 691 ANRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDS 512
ANR++ + I QSAF++ R + +N+LL+ E++++YH+ PR AMK+D+ KAFDS
Sbjct: 844 ANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDS 903
Query: 511 LNWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYL 332
+ W+ L + L + FPETF WI +CIST FSV +NG L G+F RGLRQG LSPYL
Sbjct: 904 VQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSPYL 963
Query: 331 FVLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLE 152
FV+ M VLS ++ ++ I HP C + +THL FADDLM+F G+ S + + +
Sbjct: 964 FVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFK 1023
Query: 151 EFKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
EF SGLQ++ KST++ A V + ++ + G LPV+YLGLPL
Sbjct: 1024 EFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPL 1073
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 208 bits (529), Expect = 2e-51
Identities = 103/230 (44%), Positives = 148/230 (64%)
Frame = -1
Query: 691 ANRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDS 512
ANR++ + I QSAF++ R + +N+LL+ E++++YH++ PR AMK+D+ KAFDS
Sbjct: 120 ANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAFDS 179
Query: 511 LNWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYL 332
+ W+ L + L + FPE F WI +CIST FSV +NG L G+F KRGLRQG LSPYL
Sbjct: 180 VQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYL 239
Query: 331 FVLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLE 152
FV+ M VLS ++ ++ I HP C + ++THL FADDLM+F G +S + + +
Sbjct: 240 FVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFK 299
Query: 151 EFKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
EF SGL ++ KSTL+ A V + +I + + G LPV+YLGLPL
Sbjct: 300 EFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPL 349
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 206 bits (524), Expect = 6e-51
Identities = 102/230 (44%), Positives = 143/230 (62%)
Frame = -1
Query: 691 ANRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDS 512
ANR++++ I+P QSAFI+ R + +N+LL+ E++++YH+ R A+K+D+ KAFD
Sbjct: 694 ANRLKEILPASIAPNQSAFIKDRLMMENLLLASELVKDYHKESISSRSALKIDISKAFDF 753
Query: 511 LNWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYL 332
+ W L + L + PE F+ WI +CI T FSV +NG L G+F +RGLRQG LSPYL
Sbjct: 754 VQWPFLINVLKAIHLPEMFIHWIELCIGTASFSVQVNGELSGFFRSERGLRQGCSLSPYL 813
Query: 331 FVLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLE 152
+V+ M VLS +L KKI HP C +THL FADD+M+F+ G KS + E
Sbjct: 814 YVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHLCFADDIMVFSDGTSKSIQGTLAIFE 873
Query: 151 EFKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
+F S L+++ KST+F A + K SI G+LPVKYLGLPL
Sbjct: 874 KFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPL 923
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 205 bits (522), Expect = 1e-50
Identities = 99/230 (43%), Positives = 148/230 (64%)
Frame = -1
Query: 691 ANRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDS 512
ANR++ V K I+ QSAF++ R + +N+LL+ E++++YH++ R A+K+D+ KAFDS
Sbjct: 547 ANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDS 606
Query: 511 LNWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYL 332
+ W L + + +GFP F+ WI +CI+T FSV +NG L GYF+ RGLRQG LSPYL
Sbjct: 607 VQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYL 666
Query: 331 FVLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLE 152
FV+ M+VLS +L + HP C +THL FADDLM+ + G ++S + I + +
Sbjct: 667 FVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFD 726
Query: 151 EFKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
EF +SGL+++ KST++ A + + + S G LPV+YLGLPL
Sbjct: 727 EFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPL 776
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 205 bits (521), Expect = 1e-50
Identities = 100/230 (43%), Positives = 149/230 (64%)
Frame = -1
Query: 691 ANRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDS 512
ANR++ + + I+ QS+F++ R + +N+LL+ +++++YH++ R A+K+D+ KA DS
Sbjct: 100 ANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLVKDYHKDSISERCAIKIDISKASDS 159
Query: 511 LNWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYL 332
+ W L + L+ M FPE F+ WI +CI+TP FSV +NG L G+F+ RGLRQG LSPYL
Sbjct: 160 VQWSFLINTLTAMHFPEMFIHWIRLCITTPSFSVQVNGELAGFFQSSRGLRQGCALSPYL 219
Query: 331 FVLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLE 152
FV+ M+VLS LL V +I HP C +THL FADDLMI G +S + I E +
Sbjct: 220 FVICMDVLSKLLDKVVGIGRIGYHPHCKRMGLTHLSFADDLMILTDGQCRSIEGIIEVFD 279
Query: 151 EFKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
F +SGL+++ KST+F A + +A + + G LP++YLGLPL
Sbjct: 280 LFSKWSGLKISMEKSTIFSAGLSSTSRAQLHTHFPFEVGELPIRYLGLPL 329
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 204 bits (519), Expect = 2e-50
Identities = 104/229 (45%), Positives = 148/229 (64%)
Frame = -1
Query: 688 NRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSL 509
+R++K+ +++ISP QSAF+ GR +++N+LL+ EI+ Y+ R +KVDLRKAFDS+
Sbjct: 543 SRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSV 602
Query: 508 NWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLF 329
W + + PE FV WI CISTP FSV +NG G+F+ +GLRQGDPLSPYLF
Sbjct: 603 RWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLF 662
Query: 328 VLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEE 149
VL MEV S LLK + I HP + +I+HLMFADD+M+F G S I E L++
Sbjct: 663 VLAMEVFSSLLKARFDAGYIQYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDD 722
Query: 148 FKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
F ++SGL +N K+ L+ A +++A ++ +LP++YLGLPL
Sbjct: 723 FASWSGLHVNKDKTNLYLAGT-DEVEALAISHYGFPISTLPIRYLGLPL 770
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 893
Score = 204 bits (518), Expect = 3e-50
Identities = 104/229 (45%), Positives = 148/229 (64%)
Frame = -1
Query: 688 NRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSL 509
+R++K+ +++ISP QSAF+ GR +++N+LL+ EI+ Y+ R +KVDLRKAFDS+
Sbjct: 543 SRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSV 602
Query: 508 NWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLF 329
W + + PE FV WI CISTP FSV +NG G+F+ +GLRQGDPLSPYLF
Sbjct: 603 RWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLF 662
Query: 328 VLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEE 149
VL MEV S LLK + I HP + +I+HLMFADD+M+F G S I E L++
Sbjct: 663 VLAMEVFSSLLKARFDAGYIHYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDD 722
Query: 148 FKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
F ++SGL +N K+ L+ A +++A ++ +LP++YLGLPL
Sbjct: 723 FASWSGLHVNKDKTNLYLAGT-DEVEALAISHYGFPISTLPIRYLGLPL 770
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 203 bits (517), Expect = 4e-50
Identities = 103/230 (44%), Positives = 143/230 (62%)
Frame = -1
Query: 691 ANRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDS 512
ANR++ V K I QSAF++ R + +N+LL+ EI+++YH++ R A+K+D+ KAFDS
Sbjct: 435 ANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDSVSSRCALKIDISKAFDS 494
Query: 511 LNWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYL 332
+ W+ L + L M FP F WI +CI+T FSV +NG L G F R LRQG LSPYL
Sbjct: 495 VQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVNGELAGVFSSARELRQGCSLSPYL 554
Query: 331 FVLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLE 152
FV+ M+VLS +L V ++ HP C +THL FADDLMI + G ++S I + L
Sbjct: 555 FVISMDVLSKMLDKAVGARQFGYHPKCRAIGLTHLSFADDLMILSDGKVRSIDGIVKVLY 614
Query: 151 EFKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
EF +SGL+++ KST++ A V + I G LPV+YLGLPL
Sbjct: 615 EFAKWSGLKISMEKSTMYLAGVQASVYQEIVQKFSFDVGKLPVRYLGLPL 664
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 201 bits (512), Expect = 1e-49
Identities = 100/230 (43%), Positives = 142/230 (61%)
Frame = -1
Query: 691 ANRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDS 512
ANR++++ K I QSAF++ R + +N+LL+ E++++YH++ R AMK+D+ KAFDS
Sbjct: 268 ANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDS 327
Query: 511 LNWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYL 332
L W L L+ M FP F+ WI +C+ST FS+ +NG L GYF RGLRQG LSPYL
Sbjct: 328 LQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYL 387
Query: 331 FVLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLE 152
FV+ M+VLS +L ++ HP C +THL FADDLMI G ++S I + L
Sbjct: 388 FVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLN 447
Query: 151 EFKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
+F GL++ K+TL+ A V + + + G LPV+YLGLPL
Sbjct: 448 QFAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPL 497
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 201 bits (511), Expect = 2e-49
Identities = 102/229 (44%), Positives = 148/229 (64%)
Frame = -1
Query: 688 NRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSL 509
+R++ + +I QSAF+ GR +A+N+LL+ E++ Y+R PR +KVDL+KAFDS+
Sbjct: 402 SRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSV 461
Query: 508 NWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLF 329
W + L + PE +++WI CI+TP F++S+NG G+F +GLRQGDPLSPYLF
Sbjct: 462 KWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLF 521
Query: 328 VLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEE 149
VL MEV S LL ++ + I HP + +I+HLMFADD+MIF G S I ETL++
Sbjct: 522 VLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDD 581
Query: 148 FKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
F ++SGL++N KS LF A + + + A G+ P++YLGLPL
Sbjct: 582 FADWSGLKVNKDKSQLFQAGLDLSERIT-SAAYGFPAGTFPIRYLGLPL 629
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 201 bits (511), Expect = 2e-49
Identities = 100/231 (43%), Positives = 143/231 (61%), Gaps = 1/231 (0%)
Frame = -1
Query: 691 ANRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDS 512
ANR++ H ++ P QS FI GRRI DNILL+ EII +YH+ G PR VD+ KA D+
Sbjct: 368 ANRLKGTLHLIVGPSQSTFIPGRRIGDNILLAQEIICDYHKADGQPRCTFMVDMMKANDT 427
Query: 511 LNWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYL 332
+ W + L P T + WI CIS+ KFSV +NG L G+F +RGLRQGDPLSPYL
Sbjct: 428 VEWDFIIATLQAFNIPSTLIGWIKSCISSAKFSVCVNGELAGFFARRRGLRQGDPLSPYL 487
Query: 331 FVLMMEVLSILLKNQVR-NKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETL 155
FV+ MEVLS+ ++ ++ + H C++ ++HL FADDL++F G+ S + + +
Sbjct: 488 FVIAMEVLSLCIQRRINCSPCFRYHWRCDQLNLSHLCFADDLLMFCNGDENSVRTLHDAF 547
Query: 154 EEFKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
F++ S L+ N ++S +F A V G S+ S G+ PV+YLG+PL
Sbjct: 548 SNFESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPL 598
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 201 bits (511), Expect = 2e-49
Identities = 102/229 (44%), Positives = 148/229 (64%)
Frame = -1
Query: 688 NRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSL 509
+R++ + +I QSAF+ GR +A+N+LL+ E++ Y+R PR +KVDL+KAFDS+
Sbjct: 402 SRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSV 461
Query: 508 NWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLF 329
W + L + PE +++WI CI+TP F++S+NG G+F +GLRQGDPLSPYLF
Sbjct: 462 KWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLF 521
Query: 328 VLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEE 149
VL MEV S LL ++ + I HP + +I+HLMFADD+MIF G S I ETL++
Sbjct: 522 VLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDD 581
Query: 148 FKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
F ++SGL++N KS LF A + + + A G+ P++YLGLPL
Sbjct: 582 FADWSGLKVNKDKSQLFQAGLDLSERIT-SAAYGFPAGTFPIRYLGLPL 629
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 200 bits (509), Expect = 3e-49
Identities = 103/230 (44%), Positives = 145/230 (63%)
Frame = -1
Query: 691 ANRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDS 512
A R+ + ISP QSAF++GR + +N+LL+ E+++ + + R +KVDLRKAFDS
Sbjct: 540 ARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQANISSRGVLKVDLRKAFDS 599
Query: 511 LNWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYL 332
+ W + + L P FV+WI CI++ FS++++G L GYF+G +GLRQGDPLSP L
Sbjct: 600 VGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKGLRQGDPLSPSL 659
Query: 331 FVLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLE 152
FV+ ME+LS LL+N+ + I HP +E I+ L FADDLMIF G S + I+ LE
Sbjct: 660 FVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLAFADDLMIFYDGKASSLRGIKSVLE 719
Query: 151 EFKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
FKN SGL+MN+ KS ++ A + K A G+ P +YLGLPL
Sbjct: 720 SFKNLSGLEMNTEKSAVYTAGLEDTDKEDTLA-FGFVNGTFPFRYLGLPL 768
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 199 bits (506), Expect = 7e-49
Identities = 95/230 (41%), Positives = 147/230 (63%)
Frame = -1
Query: 691 ANRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDS 512
ANR+++V + I+ QSAFI+ R + +N+LL+ E++++YH++ R A+K+D+ KAFDS
Sbjct: 65 ANRLKRVLPQFIAGNQSAFIKDRLLIENLLLATELVKDYHKDSVSERCAIKIDISKAFDS 124
Query: 511 LNWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYL 332
+ W L++ L + FP+ FV WI++C++T FSV +N L GYF RGLRQG L+PYL
Sbjct: 125 VQWSFLRNVLLTLDFPQEFVHWIMLCVTTASFSVQVNRELAGYFNSLRGLRQGCSLTPYL 184
Query: 331 FVLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLE 152
FV++M+VLS L +K HP C +THL FADD+M+ G ++S + I E +
Sbjct: 185 FVIVMDVLSKKLDRAAGLRKFGYHPKCKNLGLTHLSFADDIMVLTDGKLRSLEGIVEVFD 244
Query: 151 EFKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
F SGL+++ K+T++FA + + + + G LPV+YL LPL
Sbjct: 245 SFAKQSGLKISMAKTTIYFAGISKSVCKEFEDQFHFAVGRLPVRYLCLPL 294
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 199 bits (506), Expect = 7e-49
Identities = 102/230 (44%), Positives = 144/230 (62%)
Frame = -1
Query: 691 ANRIRKVAHKMISPCQSAFIQGRRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDS 512
ANR++ + + I+P QSAFI R + +N+LL+ E++++YH++ PR AMK+DL KAFDS
Sbjct: 813 ANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDYHKDGLSPRCAMKIDLSKAFDS 872
Query: 511 LNWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYL 332
+ W L + L+ + PE F+ WI +CIST FSV +NG LRQG LSPYL
Sbjct: 873 VQWPFLLNTLAALDIPEKFIHWINLCISTASFSVQVNG-----------LRQGCSLSPYL 921
Query: 331 FVLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLE 152
FV+ M VLS +L K+ HP C +THL FADD+M+F+ G+ S + + +
Sbjct: 922 FVICMNVLSAMLDKGAVEKRFGYHPRCRNMGLTHLCFADDIMVFSAGSAHSLEGVLAIFK 981
Query: 151 EFKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPL 2
+F +SGL ++ KSTLF A++ + ASI A GSLPV+YLGLPL
Sbjct: 982 DFAAFSGLNISLEKSTLFMASISSETCASILARFPFDSGSLPVRYLGLPL 1031