BLASTX nr result

ID: Akebia27_contig00031763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00031763
         (351 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                 61   1e-07
gb|AAT39281.2| Integrase core domain containing protein [Solanum...    56   4e-06

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
 Frame = -2

Query: 329  IRGKSTMQMLFHGCSERGGLYPFHXXXXXXXXXXXXXXXXXX*--------HN*FGHPNS 174
            ++  ST +MLF G SE GGLYPF+                           H   GHP+ 
Sbjct: 683  VKDLSTGKMLFQGPSE-GGLYPFYWNASNGVSGIAISPTALMIAKADIHTWHRRLGHPSG 741

Query: 173  RIFHYLLHTLNVSSSGL--NQFLCTECSMSKSHRLSFNESKNSVQFPLQIVHMDVRGPS 3
               H ++H  ++   G   N  +CT C + KS+RLSF+    +   PLQ++H DV GPS
Sbjct: 742  GTLHSVVHKNHLPVIGYVNNMSVCTACQLGKSYRLSFSTLPCTSSRPLQLLHTDVWGPS 800


>gb|AAT39281.2| Integrase core domain containing protein [Solanum demissum]
          Length = 1760

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
 Frame = -2

Query: 347 FQSTILIRGKSTMQMLFHGCSERGGLYPFHXXXXXXXXXXXXXXXXXX*HN*FGHPNSRI 168
           F  +  ++  ST   LF G   R GLY +                    H   GHPN R 
Sbjct: 395 FPFSYCVKDLSTGAPLFRG-QNRDGLYEWPLGSAHHTPQCNVVVPLHLWHRRLGHPNHRT 453

Query: 167 FHYLLHTLNVS-SSGLNQFLCTECSMSKSHRLSFNESKNSVQFPLQIVHMDVRGPS 3
            + + H  ++  S      +C  C  +K HRL F+E+    Q PLQI++ D+ GPS
Sbjct: 454 LNMIFHQFSLPVSHSRTASICNSCYSNKMHRLPFSENSLQSQRPLQIIYTDLWGPS 509


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