BLASTX nr result
ID: Akebia27_contig00031700
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia27_contig00031700 (540 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_007052232.1| Integrase-type DNA-binding superfamily prote... 76 5e-12 ref|XP_002301249.2| hypothetical protein POPTR_0002s14210g [Popu... 56 5e-06 >ref|XP_007052232.1| Integrase-type DNA-binding superfamily protein, putative [Theobroma cacao] gi|508704493|gb|EOX96389.1| Integrase-type DNA-binding superfamily protein, putative [Theobroma cacao] Length = 310 Score = 76.3 bits (186), Expect = 5e-12 Identities = 54/119 (45%), Positives = 62/119 (52%), Gaps = 10/119 (8%) Frame = +3 Query: 3 ASTSPKDIQEXXXXXXXXTFDQWRG--------HEDEVEPSQAELPISP-TPTTGSNDTQ 155 A TSPKDIQ TF + R E EV PSQ ELP+S + T+ S++ Q Sbjct: 193 AGTSPKDIQAAASQAAASTFLKTRRCNIEAEAEAEAEVGPSQEELPVSHLSQTSASDNVQ 252 Query: 156 ESSISTSIDDNYDTXXXXXXXXXXXXXXIDGFC-YSSLSLCTGSDIGFRLEEPFSWEHY 329 ESS S SIDD+ DT DGFC YSS D GFRLEEPFSWE+Y Sbjct: 253 ESSSSPSIDDD-DTLFDLPDLMIDATDRSDGFCSYSSTWQICAVDAGFRLEEPFSWEYY 310 >ref|XP_002301249.2| hypothetical protein POPTR_0002s14210g [Populus trichocarpa] gi|550344999|gb|EEE80522.2| hypothetical protein POPTR_0002s14210g [Populus trichocarpa] Length = 272 Score = 56.2 bits (134), Expect = 5e-06 Identities = 44/110 (40%), Positives = 55/110 (50%), Gaps = 3/110 (2%) Frame = +3 Query: 6 STSPKDIQEXXXXXXXXTFDQWRGHEDEVEPSQAELPISP-TPTTGSNDTQESSISTSID 182 S SPKDIQ +F + R E E +AEL +S + + ++TQESS S S D Sbjct: 166 SKSPKDIQAAAAKAAAASFTETRYCEGE-GGGEAELNVSNLSDSLAMDNTQESSSSPSTD 224 Query: 183 DNYDTXXXXXXXXXXXXXXIDGFCY--SSLSLCTGSDIGFRLEEPFSWEH 326 + DT DGFCY SS LC +D GFRL EPF WE+ Sbjct: 225 SD-DTLFDLPDLFIDGVHHSDGFCYYSSSWQLCA-ADTGFRLGEPFLWEY 272