BLASTX nr result

ID: Akebia27_contig00031700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00031700
         (540 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007052232.1| Integrase-type DNA-binding superfamily prote...    76   5e-12
ref|XP_002301249.2| hypothetical protein POPTR_0002s14210g [Popu...    56   5e-06

>ref|XP_007052232.1| Integrase-type DNA-binding superfamily protein, putative [Theobroma
           cacao] gi|508704493|gb|EOX96389.1| Integrase-type
           DNA-binding superfamily protein, putative [Theobroma
           cacao]
          Length = 310

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 54/119 (45%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
 Frame = +3

Query: 3   ASTSPKDIQEXXXXXXXXTFDQWRG--------HEDEVEPSQAELPISP-TPTTGSNDTQ 155
           A TSPKDIQ         TF + R          E EV PSQ ELP+S  + T+ S++ Q
Sbjct: 193 AGTSPKDIQAAASQAAASTFLKTRRCNIEAEAEAEAEVGPSQEELPVSHLSQTSASDNVQ 252

Query: 156 ESSISTSIDDNYDTXXXXXXXXXXXXXXIDGFC-YSSLSLCTGSDIGFRLEEPFSWEHY 329
           ESS S SIDD+ DT               DGFC YSS       D GFRLEEPFSWE+Y
Sbjct: 253 ESSSSPSIDDD-DTLFDLPDLMIDATDRSDGFCSYSSTWQICAVDAGFRLEEPFSWEYY 310


>ref|XP_002301249.2| hypothetical protein POPTR_0002s14210g [Populus trichocarpa]
           gi|550344999|gb|EEE80522.2| hypothetical protein
           POPTR_0002s14210g [Populus trichocarpa]
          Length = 272

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 44/110 (40%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
 Frame = +3

Query: 6   STSPKDIQEXXXXXXXXTFDQWRGHEDEVEPSQAELPISP-TPTTGSNDTQESSISTSID 182
           S SPKDIQ         +F + R  E E    +AEL +S  + +   ++TQESS S S D
Sbjct: 166 SKSPKDIQAAAAKAAAASFTETRYCEGE-GGGEAELNVSNLSDSLAMDNTQESSSSPSTD 224

Query: 183 DNYDTXXXXXXXXXXXXXXIDGFCY--SSLSLCTGSDIGFRLEEPFSWEH 326
            + DT               DGFCY  SS  LC  +D GFRL EPF WE+
Sbjct: 225 SD-DTLFDLPDLFIDGVHHSDGFCYYSSSWQLCA-ADTGFRLGEPFLWEY 272


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