BLASTX nr result

ID: Akebia27_contig00031672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00031672
         (842 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    73   2e-10
gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus not...    67   1e-08
gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Tritic...    67   1e-08
gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]      64   7e-08
gb|EMS61456.1| Protein HASTY 1 [Triticum urartu]                       62   3e-07
emb|CCH50976.1| T4.15 [Malus x robusta]                                60   8e-07
gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc...    60   1e-06
emb|CCH50954.1| T1.2 [Malus x robusta]                                 59   3e-06

>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 63/181 (34%), Positives = 89/181 (49%), Gaps = 12/181 (6%)
 Frame = -2

Query: 841 EIVIERRLKKKMNISRNQFDLMPGRSTNKAIFLLRHDIKTRGNGEEYFH----DFDKAYD 674
           E VIE RL+++  +S NQF  MPGRST +AI+LLR  ++   +G++  H    D +KAYD
Sbjct: 255 ERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLHMVFIDLEKAYD 314

Query: 673 KVPGELNLWTLGRK*VPIGYIDI--------RTCTRVL*FLWEQ*RGGK*VPVTIDXXXX 518
           +V  ++    L +K V + YI          +T  R      E        P+T+     
Sbjct: 315 RVSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTES------FPITVGLHQG 368

Query: 517 XXXXXXXXTIVIDEVMFII*STFLSVCYLQMV*Y*TIIKETKEGVIAKLEL*REVLES*G 338
                    +V+DE+   I    +  C L       +I ET+EGV AKL L REVLES G
Sbjct: 369 SSLSPYLFALVMDELTGHI-QDDIPWCMLFAYDI-VLIDETQEGVNAKLNLWREVLESKG 426

Query: 337 L 335
           L
Sbjct: 427 L 427


>gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 588

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
 Frame = -2

Query: 841 EIVIERRLKKKMNISRNQFDLMPGRSTNKAIFLLRHDIK--TRGNGEEY--FHDFDKAYD 674
           E VIERRL+    IS NQF  MPG+ST +AIFLLR  ++     N + Y  F D +KAYD
Sbjct: 259 ERVIERRLRATATISGNQFGFMPGKSTTEAIFLLRMLMERYRETNTDLYIVFIDLEKAYD 318

Query: 673 KVPGELNLWTLGRK*VPIGYIDI 605
           +VP E+  W L +K V + YI +
Sbjct: 319 RVPREVLWWVLEKKGVHVRYIKV 341


>gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Triticum urartu]
          Length = 974

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
 Frame = -2

Query: 841 EIVIERRLKKKMNISRNQFDLMPGRSTNKAIFLLRHDIKTRGNGEEYFH----DFDKAYD 674
           E VIE RL++  ++++NQF  MPGRST +AIFL+R  +K     ++  H    D +KAYD
Sbjct: 40  ERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMKRYREQKKDLHMVFIDLEKAYD 99

Query: 673 KVPGELNLWTLGRK*VPIGYIDI 605
           K+P  +  W L +  VP  YI +
Sbjct: 100 KIPRNVMWWALEKHKVPTKYITL 122


>gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]
          Length = 605

 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
 Frame = -2

Query: 841 EIVIERRLKKKMNISRNQFDLMPGRSTNKAIFLLRHDIKTRGNGEEYFH----DFDKAYD 674
           E VIE RL++  ++++NQF  MPGRST +AIFL+R  ++     ++  H    D +K+YD
Sbjct: 74  ERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMERYREQKKDLHMVFIDLEKSYD 133

Query: 673 KVPGELNLWTLGRK*VPIGYIDI 605
           K+P  +  W L +  VP  YI +
Sbjct: 134 KIPRNVMWWALKKHKVPAKYITL 156


>gb|EMS61456.1| Protein HASTY 1 [Triticum urartu]
          Length = 955

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
 Frame = -2

Query: 841 EIVIERRLKKKMNISRNQFDLMPGRSTNKAIFLLRHDIKTRGNGEEYFH----DFDKAYD 674
           E VIE RL++  ++++NQF  MPGRST +AIFL+R  ++     ++  H    D +KAYD
Sbjct: 717 ERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMERYREQKKDLHMLFIDLEKAYD 776

Query: 673 KVPGELNLWTLGRK*VPIGYIDI------RTC 596
           K+P  +  W L +  V   YI +      RTC
Sbjct: 777 KIPRNVMWWALEKHKVLAKYITLIKDTSSRTC 808


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
 Frame = -2

Query: 841 EIVIERRLKKKMNISRNQFDLMPGRSTNKAIFLLRHDIKTRGNGEEYFH----DFDKAYD 674
           E VIE RL+++  +S NQF  MPGRST +AI+LLR  ++   +G++  H    D +KAYD
Sbjct: 651 ERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLHMVFIDLEKAYD 710

Query: 673 KVPGELNLWTLGRK 632
           +VP ++ LW +  K
Sbjct: 711 RVPRDI-LWRILEK 723


>gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii]
          Length = 1134

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
 Frame = -2

Query: 841 EIVIERRLKKKMNISRNQFDLMPGRSTNKAIFLLRH-DIKTRGNGEE---YFHDFDKAYD 674
           E VIE RL++  ++++NQF  MPGRST +AIFL+R   ++ R   ++    F D +KAY+
Sbjct: 404 ERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMVRYREQKKDLHMVFIDLEKAYN 463

Query: 673 KVPGELNLWTLGRK*VPIGYIDI 605
           K+P  L  W L +  VP  YI +
Sbjct: 464 KIPRNL-WWALDKHKVPAKYITL 485


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
 Frame = -2

Query: 835 VIERRLKKKMNISRNQFDLMPGRSTNKAIFLLRHDIKTRGNGEEYFH----DFDKAYDKV 668
           VIE RL++K  +S NQF  MPG ST +AI+LLR  ++   +G+   H    D +K YD+V
Sbjct: 276 VIEHRLRQKTRVSDNQFKFMPGCSTMEAIYLLRKLMEKYRDGKNDLHMVFIDLEKVYDRV 335

Query: 667 PGELNLWTLGRK*VPIGYI 611
           P ++    L +K V + YI
Sbjct: 336 PRDILWRILEKKGVRVAYI 354


Top