BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00031502
         (849 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAO53421.1| reverse transcriptase [Cauliflower mosaic virus]       64   2e-17
dbj|BAO53407.1| reverse transcriptase [Cauliflower mosaic virus]       64   2e-17
dbj|BAO53379.1| reverse transcriptase [Cauliflower mosaic virus]...    64   2e-17
dbj|BAO53372.1| reverse transcriptase [Cauliflower mosaic virus]       64   2e-17
dbj|BAO53365.1| reverse transcriptase [Cauliflower mosaic virus]       64   2e-17
sp|Q02964.1|POL_CAMVE RecName: Full=Enzymatic polyprotein; Inclu...    64   2e-17
sp|P03555.1|POL_CAMVC RecName: Full=Enzymatic polyprotein; Inclu...    64   2e-17
dbj|BAO53386.1| reverse transcriptase [Cauliflower mosaic virus]       64   2e-17
gb|AAA21736.1| reverse transcriptase [Cauliflower mosaic virus]        64   3e-17
gb|AGT42175.1| reverse transcriptase [Cauliflower mosaic virus]        64   3e-16
dbj|BAO53351.1| reverse transcriptase [Cauliflower mosaic virus]       64   3e-16
dbj|BAO53659.1| reverse transcriptase [Cauliflower mosaic virus]       64   7e-16
dbj|BAO53680.1| reverse transcriptase [Cauliflower mosaic virus]       64   1e-15
gb|AGT42077.1| reverse transcriptase [Cauliflower mosaic virus]        64   1e-15
gb|AAA46350.1| ORF5; putative [Cauliflower mosaic virus]               64   1e-15
dbj|BAO53568.1| reverse transcriptase [Cauliflower mosaic virus]       64   1e-15
dbj|BAO53260.1| reverse transcriptase [Cauliflower mosaic virus]       64   1e-15
emb|CAA55974.1| unnamed protein product [Cauliflower mosaic virus]     64   2e-15
ref|NP_056728.1| reverse transcriptase [Cauliflower mosaic virus...    64   2e-15
gb|AFI61742.1| reverse transcriptase [Cauliflower mosaic virus]        64   2e-15

>dbj|BAO53421.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 63.5 bits (153), Expect(3) = 2e-17
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 429 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 488

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 489 YASDYIPKLAQ 499



 Score = 46.2 bits (108), Expect(3) = 2e-17
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554

Query: 591 ETW---VIALLKKDGKD-ERICDYTSRQFK 668
           + W   + A+   +G + E IC Y S  FK
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFK 584



 Score = 26.6 bits (57), Expect(3) = 2e-17
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 17/70 (24%)
 Frame = +2

Query: 689 CRKGNSSYRSRTRNFNKN-----------------LIGETFILRIDSSTLATFMKRKIMS 817
           CR  + S+++  RN++ N                 L    F++R D++   +F+      
Sbjct: 576 CRYASGSFKAAERNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKG 635

Query: 818 NTKLQRYVWW 847
           ++KL R + W
Sbjct: 636 DSKLGRNIRW 645


>dbj|BAO53407.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 63.5 bits (153), Expect(3) = 2e-17
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 429 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 488

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 489 YASDYIPKLAQ 499



 Score = 46.2 bits (108), Expect(3) = 2e-17
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554

Query: 591 ETW---VIALLKKDGKD-ERICDYTSRQFK 668
           + W   + A+   +G + E IC Y S  FK
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFK 584



 Score = 26.6 bits (57), Expect(3) = 2e-17
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 17/70 (24%)
 Frame = +2

Query: 689 CRKGNSSYRSRTRNFNKN-----------------LIGETFILRIDSSTLATFMKRKIMS 817
           CR  + S+++  RN++ N                 L    F++R D++   +F+      
Sbjct: 576 CRYASGSFKAAERNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKG 635

Query: 818 NTKLQRYVWW 847
           ++KL R + W
Sbjct: 636 DSKLGRNIRW 645


>dbj|BAO53379.1| reverse transcriptase [Cauliflower mosaic virus]
           gi|591288602|dbj|BAO53414.1| reverse transcriptase
           [Cauliflower mosaic virus]
          Length = 679

 Score = 63.5 bits (153), Expect(3) = 2e-17
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 429 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 488

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 489 YASDYIPKLAQ 499



 Score = 46.2 bits (108), Expect(3) = 2e-17
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554

Query: 591 ETW---VIALLKKDGKD-ERICDYTSRQFK 668
           + W   + A+   +G + E IC Y S  FK
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFK 584



 Score = 26.6 bits (57), Expect(3) = 2e-17
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 17/70 (24%)
 Frame = +2

Query: 689 CRKGNSSYRSRTRNFNKN-----------------LIGETFILRIDSSTLATFMKRKIMS 817
           CR  + S+++  RN++ N                 L    F++R D++   +F+      
Sbjct: 576 CRYASGSFKAAERNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKG 635

Query: 818 NTKLQRYVWW 847
           ++KL R + W
Sbjct: 636 DSKLGRNIRW 645


>dbj|BAO53372.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 63.5 bits (153), Expect(3) = 2e-17
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 429 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 488

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 489 YASDYIPKLAQ 499



 Score = 46.2 bits (108), Expect(3) = 2e-17
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554

Query: 591 ETW---VIALLKKDGKD-ERICDYTSRQFK 668
           + W   + A+   +G + E IC Y S  FK
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFK 584



 Score = 26.6 bits (57), Expect(3) = 2e-17
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 17/70 (24%)
 Frame = +2

Query: 689 CRKGNSSYRSRTRNFNKN-----------------LIGETFILRIDSSTLATFMKRKIMS 817
           CR  + S+++  RN++ N                 L    F++R D++   +F+      
Sbjct: 576 CRYASGSFKAAERNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKG 635

Query: 818 NTKLQRYVWW 847
           ++KL R + W
Sbjct: 636 DSKLGRNIRW 645


>dbj|BAO53365.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 63.5 bits (153), Expect(3) = 2e-17
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 429 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 488

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 489 YASDYIPKLAQ 499



 Score = 46.2 bits (108), Expect(3) = 2e-17
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554

Query: 591 ETW---VIALLKKDGKD-ERICDYTSRQFK 668
           + W   + A+   +G + E IC Y S  FK
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFK 584



 Score = 26.6 bits (57), Expect(3) = 2e-17
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 17/70 (24%)
 Frame = +2

Query: 689 CRKGNSSYRSRTRNFNKN-----------------LIGETFILRIDSSTLATFMKRKIMS 817
           CR  + S+++  RN++ N                 L    F++R D++   +F+      
Sbjct: 576 CRYASGSFKAAERNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKG 635

Query: 818 NTKLQRYVWW 847
           ++KL R + W
Sbjct: 636 DSKLGRNIRW 645


>sp|Q02964.1|POL_CAMVE RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase gi|293185|gb|AAA62375.1| reverse
           transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 63.5 bits (153), Expect(3) = 2e-17
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 429 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 488

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 489 YASDYIPKLAQ 499



 Score = 46.2 bits (108), Expect(3) = 2e-17
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554

Query: 591 ETW---VIALLKKDGKD-ERICDYTSRQFK 668
           + W   + A+   +G + E IC Y S  FK
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFK 584



 Score = 26.6 bits (57), Expect(3) = 2e-17
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 17/70 (24%)
 Frame = +2

Query: 689 CRKGNSSYRSRTRNFNKN-----------------LIGETFILRIDSSTLATFMKRKIMS 817
           CR  + S+++  RN++ N                 L    F++R D++   +F+      
Sbjct: 576 CRYASGSFKAAERNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKG 635

Query: 818 NTKLQRYVWW 847
           ++KL R + W
Sbjct: 636 DSKLGRNIRW 645


>sp|P03555.1|POL_CAMVC RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase
          Length = 679

 Score = 63.5 bits (153), Expect(3) = 2e-17
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 429 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 488

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 489 YASDYIPKLAQ 499



 Score = 46.2 bits (108), Expect(3) = 2e-17
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554

Query: 591 ETW---VIALLKKDGKD-ERICDYTSRQFK 668
           + W   + A+   +G + E IC Y S  FK
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFK 584



 Score = 26.6 bits (57), Expect(3) = 2e-17
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 17/70 (24%)
 Frame = +2

Query: 689 CRKGNSSYRSRTRNFNKN-----------------LIGETFILRIDSSTLATFMKRKIMS 817
           CR  + S+++  RN++ N                 L    F++R D++   +F+      
Sbjct: 576 CRYASGSFKAAERNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKG 635

Query: 818 NTKLQRYVWW 847
           ++KL R + W
Sbjct: 636 DSKLGRNIRW 645


>dbj|BAO53386.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 678

 Score = 63.5 bits (153), Expect(3) = 2e-17
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 428 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 487

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 488 YASDYIPKLAQ 498



 Score = 46.2 bits (108), Expect(3) = 2e-17
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 494 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 553

Query: 591 ETW---VIALLKKDGKD-ERICDYTSRQFK 668
           + W   + A+   +G + E IC Y S  FK
Sbjct: 554 DYWGGMLKAIKINEGTNTELICRYASGSFK 583



 Score = 26.6 bits (57), Expect(3) = 2e-17
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 17/70 (24%)
 Frame = +2

Query: 689 CRKGNSSYRSRTRNFNKN-----------------LIGETFILRIDSSTLATFMKRKIMS 817
           CR  + S+++  RN++ N                 L    F++R D++   +F+      
Sbjct: 575 CRYASGSFKAAERNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKG 634

Query: 818 NTKLQRYVWW 847
           ++KL R + W
Sbjct: 635 DSKLGRNIRW 644


>gb|AAA21736.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 680

 Score = 63.5 bits (153), Expect(3) = 3e-17
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 430 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 489

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 490 YASDYIPKLAQ 500



 Score = 45.8 bits (107), Expect(3) = 3e-17
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 496 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 555

Query: 591 ETW---VIALLKKDG-KDERICDYTSRQFK 668
           + W   + A+   +G   E IC Y S  FK
Sbjct: 556 DYWGGMLKAIKINEGINTELICRYASGSFK 585



 Score = 25.8 bits (55), Expect(3) = 3e-17
 Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 17/70 (24%)
 Frame = +2

Query: 689 CRKGNSSYRSRTRNFNKN-----------------LIGETFILRIDSSTLATFMKRKIMS 817
           CR  + S+++  RN++ N                 L    F+ R D++   +F+      
Sbjct: 577 CRYASGSFKAAERNYHSNDKETLAVINTIKKFSIYLTPAHFLTRTDNTHFKSFVNLNYKG 636

Query: 818 NTKLQRYVWW 847
           ++KL R + W
Sbjct: 637 DSKLGRNIRW 646


>gb|AGT42175.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 63.5 bits (153), Expect(2) = 3e-16
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 425 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 484

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 485 YASDYIPKLAQ 495



 Score = 48.5 bits (114), Expect(2) = 3e-16
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 491 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 550

Query: 591 ETWVIAL----LKKDGKDERICDYTSRQFK 668
           + W   L    + +D   E IC Y S  FK
Sbjct: 551 DYWGGMLKAIKINEDTNTELICRYASGSFK 580


>dbj|BAO53351.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 63.5 bits (153), Expect(2) = 3e-16
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 424 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 483

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 484 YASDYIPKLAQ 494



 Score = 48.5 bits (114), Expect(2) = 3e-16
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 490 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 549

Query: 591 ETWVIAL----LKKDGKDERICDYTSRQFK 668
           + W   L    + +D   E IC Y S  FK
Sbjct: 550 DYWGGMLKAIKINEDTNTELICRYASGSFK 579


>dbj|BAO53659.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 63.5 bits (153), Expect(2) = 7e-16
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 424 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 483

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 484 YASDYIPKLAQ 494



 Score = 47.4 bits (111), Expect(2) = 7e-16
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 490 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 549

Query: 591 ETWVIAL----LKKDGKDERICDYTSRQFK 668
           + W   L    + K    E IC Y S  FK
Sbjct: 550 DYWGGMLKAIKINKGTNTELICRYASGSFK 579


>dbj|BAO53680.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 63.5 bits (153), Expect(2) = 1e-15
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 424 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 483

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 484 YASDYIPKLAQ 494



 Score = 47.0 bits (110), Expect(2) = 1e-15
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 490 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 549

Query: 591 ETWVIAL----LKKDGKDERICDYTSRQFK 668
           + W   L    + +    E IC Y S  FK
Sbjct: 550 DYWGGMLKAIQINESANTELICRYASGSFK 579


>gb|AGT42077.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 63.5 bits (153), Expect(2) = 1e-15
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 425 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 484

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 485 YASDYIPKLAQ 495



 Score = 46.6 bits (109), Expect(2) = 1e-15
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 491 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 550

Query: 591 ETWVIAL----LKKDGKDERICDYTSRQFK 668
           + W   L    + +    E IC Y S  FK
Sbjct: 551 DYWGGMLKAIKINEGANTELICRYASGSFK 580


>gb|AAA46350.1| ORF5; putative [Cauliflower mosaic virus]
          Length = 675

 Score = 63.5 bits (153), Expect(2) = 1e-15
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 425 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 484

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 485 YASDYIPKLAQ 495



 Score = 46.6 bits (109), Expect(2) = 1e-15
 Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q+ PP   P  E   I+  D ++
Sbjct: 491 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQAFPPLHHPLPEEKLIIETDASD 550

Query: 591 ETW---VIALLKKDGKD-ERICDYTSRQFK 668
           + W   + A+   +G + E IC Y S  FK
Sbjct: 551 DYWGGMLKAIKINEGTNTELICRYASGSFK 580


>dbj|BAO53568.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 63.5 bits (153), Expect(2) = 1e-15
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 424 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 483

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 484 YASDYIPKLAQ 494



 Score = 46.6 bits (109), Expect(2) = 1e-15
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 490 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 549

Query: 591 ETWVIAL----LKKDGKDERICDYTSRQFK 668
           + W   L    + +    E IC Y S  FK
Sbjct: 550 DYWGGMLKAIKINEGSNTELICRYASGSFK 579


>dbj|BAO53260.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 63.5 bits (153), Expect(2) = 1e-15
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 424 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 483

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 484 YASDYIPKLAQ 494



 Score = 46.6 bits (109), Expect(2) = 1e-15
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 490 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 549

Query: 591 ETWVIAL----LKKDGKDERICDYTSRQFK 668
           + W   L    + +    E IC Y S  FK
Sbjct: 550 DYWGGMLKAIKINEGANTELICRYASGSFK 579


>emb|CAA55974.1| unnamed protein product [Cauliflower mosaic virus]
          Length = 680

 Score = 63.5 bits (153), Expect(2) = 2e-15
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 430 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 489

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 490 YASDYIPKLAQ 500



 Score = 46.2 bits (108), Expect(2) = 2e-15
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 496 PKLAQIRKPLQAKLKENVPWRWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 555

Query: 591 ETW---VIALLKKDGKD-ERICDYTSRQFK 668
           + W   + A+   +G + E IC Y S  FK
Sbjct: 556 DYWGGMLKAIKINEGTNTELICRYASGSFK 585


>ref|NP_056728.1| reverse transcriptase [Cauliflower mosaic virus]
           gi|130592|sp|P03554.1|POL_CAMVS RecName: Full=Enzymatic
           polyprotein; Includes: RecName: Full=Aspartic protease;
           Includes: RecName: Full=Endonuclease; Includes: RecName:
           Full=Reverse transcriptase gi|58826|emb|CAA23460.1|
           unnamed protein product [Cauliflower mosaic virus]
          Length = 679

 Score = 63.5 bits (153), Expect(2) = 2e-15
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 429 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 488

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 489 YASDYIPKLAQ 499



 Score = 46.2 bits (108), Expect(2) = 2e-15
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWRWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554

Query: 591 ETW---VIALLKKDGKD-ERICDYTSRQFK 668
           + W   + A+   +G + E IC Y S  FK
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFK 584


>gb|AFI61742.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 63.5 bits (153), Expect(2) = 2e-15
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +1

Query: 223 HGLSPSKDKFQVAVNQVDFLEVHLVEGKINMQPHVL*KNNNFPDQLEGKLQCQRFLGCVN 402
           HG+  SK K Q+   +++FL + + EG    Q H+L   N FPD LE K Q QRFLG + 
Sbjct: 429 HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 488

Query: 403 HAREFIPKLSQ 435
           +A ++IPKL+Q
Sbjct: 489 YASDYIPKLAQ 499



 Score = 46.2 bits (108), Expect(2) = 2e-15
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
 Frame = +3

Query: 420 PKI--ISKHISRKVMKNTPYNWTQKATIDVQLLKKIWQSLPP-SEPTYEGPFILAIDTTN 590
           PK+  I K +  K+ +N P+ WT++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554

Query: 591 ETW---VIALLKKDGKD-ERICDYTSRQFK 668
           + W   + A+   +G + E IC Y S  FK
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFK 584