BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00031326
         (431 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containi...    69   7e-10
ref|XP_006483487.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Popu...    57   2e-06
ref|XP_007011706.1| Pentatricopeptide repeat-containing protein,...    55   8e-06

>ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
           gi|296082142|emb|CBI21147.3| unnamed protein product
           [Vitis vinifera]
          Length = 1113

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
 Frame = -2

Query: 265 VMELCFSMICTTNVK--CSVPIDCKPTVLSNYGSTRRIKTGNLKVLTYGFLENWKKHGKK 92
           V+ L  S  C +  K  C+V    KP+VLS   S   IK GNLKVL  G   NWKKH KK
Sbjct: 3   VIILSSSSSCCSKFKYGCAVT-GTKPSVLSCNESLGGIKIGNLKVLPSGCRVNWKKHRKK 61

Query: 91  NVGFCGFVMKSSFE-RVAKGKTKNGLSSDEV 2
            VG CGFV++SSF+  V K K ++ +SS+EV
Sbjct: 62  QVGVCGFVIRSSFDVVVVKRKPESTMSSEEV 92


>ref|XP_006483487.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Citrus sinensis]
          Length = 1107

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 37/61 (60%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
 Frame = -2

Query: 181 NYGSTRRIKTGNLKVLTYGFLENWKKHGKKNVGFCGFVMKSSFE-RVAKGKTKNGLSSDE 5
           N GS   +K GNLKV       NWKKH KK VGFCG+VMKSS E  V KGK +NGL+S+E
Sbjct: 33  NNGSVGGLKVGNLKV-------NWKKHWKKQVGFCGYVMKSSNEVVVVKGKPRNGLTSEE 85

Query: 4   V 2
           V
Sbjct: 86  V 86


>ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Populus trichocarpa]
           gi|550337245|gb|EEE92232.2| hypothetical protein
           POPTR_0006s28060g [Populus trichocarpa]
          Length = 1115

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
 Frame = -2

Query: 265 VMELCFSMICTTNVKCSVPIDCKPTVLSNY----GSTRRIKTGNLKVLTYGFLENWKKHG 98
           V+ L  S +C + +  S+    +   LS++    GS    K G L+V  +G   NWKK+ 
Sbjct: 3   VLILSSSSMCCSCIDYSIAFS-EQNRLSDFRHKNGSLGGEKFGTLRVFPFGSNVNWKKNN 61

Query: 97  KKNVGFCGFVMKSSFER-VAKGKTKNGLSSDEV 2
           KK V FCGF +KS  E  V  GK + G SSDEV
Sbjct: 62  KKQVAFCGFALKSQNEELVVNGKPRKGSSSDEV 94


>ref|XP_007011706.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao] gi|508782069|gb|EOY29325.1| Pentatricopeptide
           repeat-containing protein, putative [Theobroma cacao]
          Length = 1112

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
 Frame = -2

Query: 265 VMELCFSMICTTNVKCS-VPIDCKPTVLSN-YGSTRRIKTGNLKVLTYGFLENWKKHGKK 92
           V+ LC    C  ++  S +  D K +  S+ Y S    K GNL+V  YG + +WKK  K+
Sbjct: 3   VLILCSMTACCNSLSYSCILADSKVSAFSHKYVSFGGRKNGNLEVWPYGCMVSWKKRRKQ 62

Query: 91  NVGFCGFVMKSSFER-VAKGKTKNGLSSDEV 2
            +GF  +VMK+S +  VA GK KN LSS+EV
Sbjct: 63  RLGF--YVMKNSCQMVVANGKCKNSLSSEEV 91