BLASTX nr result

ID: Akebia27_contig00030861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00030861
         (850 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS54598.1| Transposon Ty3-G Gag-Pol polyprotein [Triticum ur...    47   3e-07
ref|XP_004134253.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    45   1e-06

>gb|EMS54598.1| Transposon Ty3-G Gag-Pol polyprotein [Triticum urartu]
          Length = 1704

 Score = 47.0 bits (110), Expect(3) = 3e-07
 Identities = 25/54 (46%), Positives = 35/54 (64%)
 Frame = -1

Query: 736 VKIDVFNFNGRLHDQNFLD*LIKPERSFYYM*ILDDKKVKLVASKLKGGALALW 575
           VK ++ +FNG +  +  LD L + E  F  M +L+D++V LVA KLKGGA A W
Sbjct: 115 VKAEIPSFNGNVDIEGCLDWLYEVETFFEVMEVLEDRRVPLVAYKLKGGAGAWW 168



 Score = 32.7 bits (73), Expect(3) = 3e-07
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = -2

Query: 564 TWERMKQLLQVRFLLVNYD*VCFPQY 487
           TW +MK LL+VRFL  +YD + F Q+
Sbjct: 185 TWRQMKGLLKVRFLPADYDQILFIQF 210



 Score = 21.2 bits (43), Expect(3) = 3e-07
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 482 QGSRSLKDFEEEF 444
           QG+R++ D+ EEF
Sbjct: 215 QGNRTVSDYTEEF 227


>ref|XP_004134253.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101214124 [Cucumis sativus]
          Length = 586

 Score = 45.1 bits (105), Expect(3) = 1e-06
 Identities = 26/62 (41%), Positives = 36/62 (58%)
 Frame = -1

Query: 760 FR*DWK*YVKIDVFNFNGRLHDQNFLD*LIKPERSFYYM*ILDDKKVKLVASKLKGGALA 581
           F+ D +  +K+D+  FNGR+  + FLD +   E  F Y      KKV+LVA KL+GG  A
Sbjct: 84  FQEDQEIRMKVDLPTFNGRMDVEKFLDWIKNVEIFFNYANTPKHKKVRLVALKLQGGTSA 143

Query: 580 LW 575
            W
Sbjct: 144 WW 145



 Score = 27.3 bits (59), Expect(3) = 1e-06
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -2

Query: 564 TWERMKQLLQVRFLLVNYD*VCFPQY 487
           +W +M +L++ RFL +NY  + + QY
Sbjct: 162 SWPKMLRLMKKRFLPINYQQLLYNQY 187



 Score = 26.2 bits (56), Expect(3) = 1e-06
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -3

Query: 482 QGSRSLKDFEEEFY 441
           QGSRS+ D+ EEFY
Sbjct: 192 QGSRSIMDYTEEFY 205


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