BLASTX nr result
ID: Akebia27_contig00029873
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00029873
(324 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chlorop... 75 7e-12
gb|EXC01483.1| 50S ribosomal protein L4 [Morus notabilis] 71 1e-10
ref|XP_007016161.1| 50S ribosomal protein L4 isoform 3, partial ... 70 2e-10
ref|XP_007016160.1| 50S ribosomal protein L4 isoform 2, partial ... 70 2e-10
ref|XP_007016159.1| 50S ribosomal protein L4 isoform 1 [Theobrom... 70 2e-10
ref|XP_002525600.1| 50S ribosomal protein L4, putative [Ricinus ... 70 3e-10
ref|XP_002309469.2| hypothetical protein POPTR_0006s23770g [Popu... 68 1e-09
ref|NP_001030985.1| 50S ribosomal protein L4 [Arabidopsis thalia... 67 3e-09
ref|NP_849604.1| 50S ribosomal protein L4 [Arabidopsis thaliana]... 67 3e-09
gb|AAM61637.1| ribosomal protein L4 [Arabidopsis thaliana] 67 3e-09
emb|CAA74895.1| ribosomal protein L4 [Arabidopsis thaliana] gi|2... 67 3e-09
ref|NP_563786.1| 50S ribosomal protein L4 [Arabidopsis thaliana]... 67 3e-09
ref|XP_006417815.1| hypothetical protein EUTSA_v10008395mg [Eutr... 66 4e-09
ref|XP_006417814.1| hypothetical protein EUTSA_v10008395mg [Eutr... 66 4e-09
ref|XP_006305486.1| hypothetical protein CARUB_v10009944mg [Caps... 66 6e-09
ref|XP_002889640.1| hypothetical protein ARALYDRAFT_470751 [Arab... 66 6e-09
emb|CAA63651.1| ribosomal protein L4 [Spinacia oleracea] 65 8e-09
sp|O49937.1|RK4_SPIOL RecName: Full=50S ribosomal protein L4, ch... 65 8e-09
gb|AFN53661.1| 50S ribosomal protein [Linum usitatissimum] 65 1e-08
gb|EMT00761.1| 50S ribosomal protein L4, chloroplastic [Aegilops... 64 3e-08
>ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Cucumis
sativus] gi|449496602|ref|XP_004160176.1| PREDICTED: 50S
ribosomal protein L4, chloroplastic-like [Cucumis
sativus]
Length = 288
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = +1
Query: 169 SHSQTLNPNSPRIFIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
S +L P + + I SELATLP+LSF G+K+GETYLDLKSAPPETARAVVH
Sbjct: 33 SKPNSLKPQTKTLSISSELATLPVLSFTGQKVGETYLDLKSAPPETARAVVH 84
>gb|EXC01483.1| 50S ribosomal protein L4 [Morus notabilis]
Length = 293
Score = 71.2 bits (173), Expect = 1e-10
Identities = 38/58 (65%), Positives = 43/58 (74%), Gaps = 4/58 (6%)
Frame = +1
Query: 163 PFSHSQTLN----PNSPRIFIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
PF +T N P + I SELATLP+LSF GEK+GET+LDLKSAPPETARAVVH
Sbjct: 32 PFLSFKTPNSLKSPTPKPLSIISELATLPVLSFTGEKVGETFLDLKSAPPETARAVVH 89
>ref|XP_007016161.1| 50S ribosomal protein L4 isoform 3, partial [Theobroma cacao]
gi|508786524|gb|EOY33780.1| 50S ribosomal protein L4
isoform 3, partial [Theobroma cacao]
Length = 269
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +1
Query: 193 NSPRIFIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
++P + I S+L+TL ILSF GEKIGETYLDLKSAPPETARAVVH
Sbjct: 21 SNPNLCIASQLSTLSILSFTGEKIGETYLDLKSAPPETARAVVH 64
>ref|XP_007016160.1| 50S ribosomal protein L4 isoform 2, partial [Theobroma cacao]
gi|508786523|gb|EOY33779.1| 50S ribosomal protein L4
isoform 2, partial [Theobroma cacao]
Length = 271
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +1
Query: 193 NSPRIFIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
++P + I S+L+TL ILSF GEKIGETYLDLKSAPPETARAVVH
Sbjct: 21 SNPNLCIASQLSTLSILSFTGEKIGETYLDLKSAPPETARAVVH 64
>ref|XP_007016159.1| 50S ribosomal protein L4 isoform 1 [Theobroma cacao]
gi|508786522|gb|EOY33778.1| 50S ribosomal protein L4
isoform 1 [Theobroma cacao]
Length = 303
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +1
Query: 193 NSPRIFIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
++P + I S+L+TL ILSF GEKIGETYLDLKSAPPETARAVVH
Sbjct: 38 SNPNLCIASQLSTLSILSFTGEKIGETYLDLKSAPPETARAVVH 81
>ref|XP_002525600.1| 50S ribosomal protein L4, putative [Ricinus communis]
gi|223535036|gb|EEF36718.1| 50S ribosomal protein L4,
putative [Ricinus communis]
Length = 283
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/55 (65%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Frame = +1
Query: 166 FSHSQTLNP--NSPRIFIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
FS +LNP +S + I +++TLPILSF GEKIGETYLDLK+APP+TARAVVH
Sbjct: 30 FSKPNSLNPPNSSLSLSISCQVSTLPILSFTGEKIGETYLDLKTAPPDTARAVVH 84
>ref|XP_002309469.2| hypothetical protein POPTR_0006s23770g [Populus trichocarpa]
gi|550336953|gb|EEE92992.2| hypothetical protein
POPTR_0006s23770g [Populus trichocarpa]
Length = 290
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +1
Query: 211 IRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
I ++ATLPILSF GEKIGETYLDLKSAPPETARAVVH
Sbjct: 43 ISCQVATLPILSFTGEKIGETYLDLKSAPPETARAVVH 80
>ref|NP_001030985.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
gi|79317147|ref|NP_001030986.1| 50S ribosomal protein L4
[Arabidopsis thaliana]
gi|8778555|gb|AAF79563.1|AC022464_21 F22G5.34
[Arabidopsis thaliana] gi|222423413|dbj|BAH19678.1|
AT1G07320 [Arabidopsis thaliana]
gi|332189987|gb|AEE28108.1| 50S ribosomal protein L4
[Arabidopsis thaliana] gi|332189988|gb|AEE28109.1| 50S
ribosomal protein L4 [Arabidopsis thaliana]
Length = 278
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/43 (72%), Positives = 38/43 (88%)
Frame = +1
Query: 196 SPRIFIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
S + + S+LATLPILSF+GEK+GETYLDLK+AP +TARAVVH
Sbjct: 42 SKPLSVSSQLATLPILSFEGEKVGETYLDLKAAPEDTARAVVH 84
>ref|NP_849604.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
gi|332189986|gb|AEE28107.1| 50S ribosomal protein L4
[Arabidopsis thaliana]
Length = 280
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/43 (72%), Positives = 38/43 (88%)
Frame = +1
Query: 196 SPRIFIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
S + + S+LATLPILSF+GEK+GETYLDLK+AP +TARAVVH
Sbjct: 42 SKPLSVSSQLATLPILSFEGEKVGETYLDLKAAPEDTARAVVH 84
>gb|AAM61637.1| ribosomal protein L4 [Arabidopsis thaliana]
Length = 282
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/43 (72%), Positives = 38/43 (88%)
Frame = +1
Query: 196 SPRIFIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
S + + S+LATLPILSF+GEK+GETYLDLK+AP +TARAVVH
Sbjct: 42 SKPLSVSSQLATLPILSFEGEKVGETYLDLKAAPEDTARAVVH 84
>emb|CAA74895.1| ribosomal protein L4 [Arabidopsis thaliana]
gi|2792000|emb|CAA74894.1| ribosomal protein L4
[Arabidopsis thaliana]
Length = 282
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/43 (72%), Positives = 38/43 (88%)
Frame = +1
Query: 196 SPRIFIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
S + + S+LATLPILSF+GEK+GETYLDLK+AP +TARAVVH
Sbjct: 42 SKPLSVSSQLATLPILSFEGEKVGETYLDLKAAPEDTARAVVH 84
>ref|NP_563786.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
gi|21542429|sp|O50061.2|RK4_ARATH RecName: Full=50S
ribosomal protein L4, chloroplastic; AltName: Full=CL4;
AltName: Full=R-protein L4; Flags: Precursor
gi|17380866|gb|AAL36245.1| unknown protein [Arabidopsis
thaliana] gi|21436209|gb|AAM51392.1| unknown protein
[Arabidopsis thaliana] gi|110741117|dbj|BAE98652.1|
hypothetical protein [Arabidopsis thaliana]
gi|332189985|gb|AEE28106.1| 50S ribosomal protein L4
[Arabidopsis thaliana]
Length = 282
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/43 (72%), Positives = 38/43 (88%)
Frame = +1
Query: 196 SPRIFIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
S + + S+LATLPILSF+GEK+GETYLDLK+AP +TARAVVH
Sbjct: 42 SKPLSVSSQLATLPILSFEGEKVGETYLDLKAAPEDTARAVVH 84
>ref|XP_006417815.1| hypothetical protein EUTSA_v10008395mg [Eutrema salsugineum]
gi|557095586|gb|ESQ36168.1| hypothetical protein
EUTSA_v10008395mg [Eutrema salsugineum]
Length = 286
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/43 (72%), Positives = 38/43 (88%)
Frame = +1
Query: 196 SPRIFIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
S + + S+LATLPI+SF+GEKIGETYLDLK+AP +TARAVVH
Sbjct: 42 SKPLSVASQLATLPIISFEGEKIGETYLDLKTAPEDTARAVVH 84
>ref|XP_006417814.1| hypothetical protein EUTSA_v10008395mg [Eutrema salsugineum]
gi|557095585|gb|ESQ36167.1| hypothetical protein
EUTSA_v10008395mg [Eutrema salsugineum]
Length = 284
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/43 (72%), Positives = 38/43 (88%)
Frame = +1
Query: 196 SPRIFIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
S + + S+LATLPI+SF+GEKIGETYLDLK+AP +TARAVVH
Sbjct: 42 SKPLSVASQLATLPIISFEGEKIGETYLDLKTAPEDTARAVVH 84
>ref|XP_006305486.1| hypothetical protein CARUB_v10009944mg [Capsella rubella]
gi|482574197|gb|EOA38384.1| hypothetical protein
CARUB_v10009944mg [Capsella rubella]
Length = 283
Score = 65.9 bits (159), Expect = 6e-09
Identities = 30/43 (69%), Positives = 38/43 (88%)
Frame = +1
Query: 196 SPRIFIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
S + + S+LATLPI+SF+GEK+GETYLDLK+AP +TARAVVH
Sbjct: 42 SKPLSVASQLATLPIISFEGEKVGETYLDLKTAPEDTARAVVH 84
>ref|XP_002889640.1| hypothetical protein ARALYDRAFT_470751 [Arabidopsis lyrata subsp.
lyrata] gi|297335482|gb|EFH65899.1| hypothetical protein
ARALYDRAFT_470751 [Arabidopsis lyrata subsp. lyrata]
Length = 280
Score = 65.9 bits (159), Expect = 6e-09
Identities = 30/43 (69%), Positives = 38/43 (88%)
Frame = +1
Query: 196 SPRIFIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
S + + S+LATLPI+SF+GEK+GETYLDLK+AP +TARAVVH
Sbjct: 42 SKPLSVASQLATLPIISFEGEKVGETYLDLKTAPEDTARAVVH 84
>emb|CAA63651.1| ribosomal protein L4 [Spinacia oleracea]
Length = 293
Score = 65.5 bits (158), Expect = 8e-09
Identities = 34/52 (65%), Positives = 41/52 (78%)
Frame = +1
Query: 169 SHSQTLNPNSPRIFIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
SHSQT S + I+SEL LPIL+F GEK+GET+L+LK+APPE ARAVVH
Sbjct: 38 SHSQT----SLSLSIKSELIPLPILNFSGEKVGETFLNLKTAPPEKARAVVH 85
>sp|O49937.1|RK4_SPIOL RecName: Full=50S ribosomal protein L4, chloroplastic;
Short=R-protein L4; Flags: Precursor
gi|189096129|pdb|3BBO|G Chain G, Homology Model For The
Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em
Map Of The 70s Chlororibosome gi|2792007|emb|CAA75149.1|
chloroplast ribosomal protein L4 [Spinacia oleracea]
Length = 293
Score = 65.5 bits (158), Expect = 8e-09
Identities = 34/52 (65%), Positives = 41/52 (78%)
Frame = +1
Query: 169 SHSQTLNPNSPRIFIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
SHSQT S + I+SEL LPIL+F GEK+GET+L+LK+APPE ARAVVH
Sbjct: 38 SHSQT----SLSLSIKSELIPLPILNFSGEKVGETFLNLKTAPPEKARAVVH 85
>gb|AFN53661.1| 50S ribosomal protein [Linum usitatissimum]
Length = 294
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +1
Query: 193 NSPRIFIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
NS + I E+ATLPI +F GEK+GET LD+KSAPPETA+AVVH
Sbjct: 41 NSTKFTISCEVATLPIFNFTGEKVGETVLDIKSAPPETAKAVVH 84
>gb|EMT00761.1| 50S ribosomal protein L4, chloroplastic [Aegilops tauschii]
Length = 283
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +1
Query: 163 PFSHSQTLNPNSPRI-FIRSELATLPILSFDGEKIGETYLDLKSAPPETARAVVH 324
PF H L P++ + +R+E TLP+++F GEK+GE LD+K+APP TARAVVH
Sbjct: 5 PFPHQAALRPSASILRALRAEATTLPVINFTGEKVGEVALDIKAAPPSTARAVVH 59