BLASTX nr result

ID: Akebia27_contig00029493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00029493
         (924 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                                52   4e-06

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 52.0 bits (123), Expect(2) = 4e-06
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 8/71 (11%)
 Frame = -3

Query: 637  WMCFRSAM*PI----HPNQLKSKFYKMVGRPIMLYGAEC*EIK-KHVHIVRIGDMRRLRW 473
            WM ++SA   +     P +LK KFY+   RP MLYG EC  +K +HVH + + +MR LRW
Sbjct: 822  WMKWKSASGVLCDRRMPLKLKGKFYRTAIRPAMLYGTECWAVKHQHVHKMGVAEMRMLRW 881

Query: 472  ---RSKKDEQR 449
                ++KD+ R
Sbjct: 882  MCGHTRKDKIR 892



 Score = 26.2 bits (56), Expect(2) = 4e-06
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = -2

Query: 347 VKKSVGIISVCDKLRQSQLKCLGYVKR 267
           ++  VG+  +  K+R++QL+  G+V+R
Sbjct: 896 IRGKVGVAEIQGKMRENQLRWFGHVQR 922


Top