BLASTX nr result

ID: Akebia27_contig00029082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00029082
         (515 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006409689.1| hypothetical protein EUTSA_v10022519mg [Eutr...    56   6e-06
ref|XP_006296589.1| hypothetical protein CARUB_v10012803mg [Caps...    56   6e-06
ref|XP_002885872.1| hypothetical protein ARALYDRAFT_480306 [Arab...    56   6e-06
ref|NP_178970.3| chromatin remodeling 5 [Arabidopsis thaliana] g...    56   6e-06
gb|AAD28668.1| putative chromodomain-helicase-DNA-binding protei...    56   6e-06

>ref|XP_006409689.1| hypothetical protein EUTSA_v10022519mg [Eutrema salsugineum]
            gi|557110851|gb|ESQ51142.1| hypothetical protein
            EUTSA_v10022519mg [Eutrema salsugineum]
          Length = 1730

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +1

Query: 433  MSMRLWNYVSTFSNLSGERLNQIYSKL 513
            M+MRLWNYVSTFSNLSG+RLNQIYSKL
Sbjct: 1604 MTMRLWNYVSTFSNLSGDRLNQIYSKL 1630


>ref|XP_006296589.1| hypothetical protein CARUB_v10012803mg [Capsella rubella]
            gi|482565298|gb|EOA29487.1| hypothetical protein
            CARUB_v10012803mg [Capsella rubella]
          Length = 1725

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +1

Query: 433  MSMRLWNYVSTFSNLSGERLNQIYSKL 513
            M+MRLWNYVSTFSNLSG+RLNQIYSKL
Sbjct: 1597 MTMRLWNYVSTFSNLSGDRLNQIYSKL 1623


>ref|XP_002885872.1| hypothetical protein ARALYDRAFT_480306 [Arabidopsis lyrata subsp.
            lyrata] gi|297331712|gb|EFH62131.1| hypothetical protein
            ARALYDRAFT_480306 [Arabidopsis lyrata subsp. lyrata]
          Length = 1721

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +1

Query: 433  MSMRLWNYVSTFSNLSGERLNQIYSKL 513
            M+MRLWNYVSTFSNLSG+RLNQIYSKL
Sbjct: 1599 MTMRLWNYVSTFSNLSGDRLNQIYSKL 1625


>ref|NP_178970.3| chromatin remodeling 5 [Arabidopsis thaliana]
            gi|330251136|gb|AEC06230.1| chromatin remodeling 5
            [Arabidopsis thaliana]
          Length = 1724

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +1

Query: 433  MSMRLWNYVSTFSNLSGERLNQIYSKL 513
            M+MRLWNYVSTFSNLSG+RLNQIYSKL
Sbjct: 1602 MTMRLWNYVSTFSNLSGDRLNQIYSKL 1628


>gb|AAD28668.1| putative chromodomain-helicase-DNA-binding protein [Arabidopsis
            thaliana]
          Length = 1738

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +1

Query: 433  MSMRLWNYVSTFSNLSGERLNQIYSKL 513
            M+MRLWNYVSTFSNLSG+RLNQIYSKL
Sbjct: 1616 MTMRLWNYVSTFSNLSGDRLNQIYSKL 1642


Top