BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00028973
         (863 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   330   4e-88
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   330   4e-88
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-...   329   1e-87
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...   321   3e-85
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   321   3e-85
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub...   318   1e-84
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub...   316   8e-84
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...   316   8e-84
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub...   309   8e-82
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub...   309   8e-82
ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV su...   304   3e-80
ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phas...   303   7e-80
ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phas...   303   7e-80
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me...   303   7e-80
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su...   301   2e-79
ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV su...   301   2e-79
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su...   301   2e-79
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su...   301   2e-79
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   301   2e-79
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   289   1e-75

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  330 bits (846), Expect = 4e-88
 Identities = 175/292 (59%), Positives = 219/292 (75%), Gaps = 5/292 (1%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQS++SRVEL ELV LN QL+N Q+GRNLLSL  DSL+A +L+ E GV LN FQMQQLEM
Sbjct: 493  PQSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEM 552

Query: 181  LCPRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLEST 360
             CP QL  PAI+KAP   + +WTGKQL SMLLPP F++ FP NGV I+DGE++SSS  S 
Sbjct: 553  FCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELISSSDGSA 612

Query: 361  WLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRKKM 540
            WL+D +GN+FS+LV+    KALD L++AQEVL EW+SMRG SVSL D YLSSDS SRK M
Sbjct: 613  WLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSDSISRKNM 672

Query: 541  MEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENENAEVLEV-----SLEKKAVLNKV 705
            ++ V  GL   E+T   KQL+VD   + L+  G+ N+N  V +V       +  A L + 
Sbjct: 673  IDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSLWYERQGSAALCQS 732

Query: 706  SIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQY 861
            S+ AF++ FRD+QNLVYQYA++DNSLLAM+KAGSKG+L +LVQQGLCLGLQ+
Sbjct: 733  SVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQH 784


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  330 bits (846), Expect = 4e-88
 Identities = 175/292 (59%), Positives = 219/292 (75%), Gaps = 5/292 (1%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQS++SRVEL ELV LN QL+N Q+GRNLLSL  DSL+A +L+ E GV LN FQMQQLEM
Sbjct: 463  PQSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEM 522

Query: 181  LCPRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLEST 360
             CP QL  PAI+KAP   + +WTGKQL SMLLPP F++ FP NGV I+DGE++SSS  S 
Sbjct: 523  FCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELISSSDGSA 582

Query: 361  WLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRKKM 540
            WL+D +GN+FS+LV+    KALD L++AQEVL EW+SMRG SVSL D YLSSDS SRK M
Sbjct: 583  WLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSDSISRKNM 642

Query: 541  MEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENENAEVLEV-----SLEKKAVLNKV 705
            ++ V  GL   E+T   KQL+VD   + L+  G+ N+N  V +V       +  A L + 
Sbjct: 643  IDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSLWYERQGSAALCQS 702

Query: 706  SIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQY 861
            S+ AF++ FRD+QNLVYQYA++DNSLLAM+KAGSKG+L +LVQQGLCLGLQ+
Sbjct: 703  SVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQH 754


>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
            cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
            polymerase II subunit RPB1-B, putative [Theobroma cacao]
          Length = 1484

 Score =  329 bits (843), Expect = 1e-87
 Identities = 169/292 (57%), Positives = 219/292 (75%), Gaps = 5/292 (1%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQSI++RVEL ELV LN QL+NGQ+GRNLLSL HDSLTA YL++E GV LN FQMQQLEM
Sbjct: 474  PQSIKARVELIELVSLNRQLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEM 533

Query: 181  LCPRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLEST 360
             CP     PAI+KAP  +S +WTGKQLLSML P  FD+ F  N V I +GE++SSS  ST
Sbjct: 534  FCPNHSPFPAIVKAPLLRSSVWTGKQLLSMLFPLEFDYDFTPNDVVIRNGELISSSEGST 593

Query: 361  WLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRKKM 540
            WL+D +GN+F +L++ Y  K LD L++AQEVL EW+SMRG SVSL D YLSSDS S+K M
Sbjct: 594  WLRDADGNLFQSLIKHYQGKVLDFLYAAQEVLCEWLSMRGLSVSLSDLYLSSDSNSQKNM 653

Query: 541  MEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENENAEVLEV-----SLEKKAVLNKV 705
            M+ +  GLQE+E+T   KQL+VD   D L+ + +E ++   L+V       ++ A L++ 
Sbjct: 654  MDEIFCGLQEIEQTCNFKQLMVDSNHDFLVGHDEEVDSFMALDVEQMCYEKQRSAALSQA 713

Query: 706  SIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQY 861
            S+ +F++VFRD+QNL+Y+YA++DNSLL M KAGSKG+L +LVQ  LCLGLQ+
Sbjct: 714  SVDSFKQVFRDIQNLLYKYANKDNSLLTMFKAGSKGNLLKLVQHSLCLGLQH 765


>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Solanum tuberosum]
          Length = 1233

 Score =  321 bits (822), Expect = 3e-85
 Identities = 166/291 (57%), Positives = 216/291 (74%), Gaps = 5/291 (1%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQSI+SR+EL ELV L  QL++GQNG+NLLSL HDSLTA +L+ E GVFL+RFQMQQL+M
Sbjct: 233  PQSIDSRIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQM 292

Query: 181  LCPRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLEST 360
             CPRQL   AI+KAPP     WTGKQL S+LLP   ++ FPSNGV I++GEI++SS  S+
Sbjct: 293  FCPRQLGMTAIVKAPPGNLCYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSS 352

Query: 361  WLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRKKM 540
            WL+D   N+F +LV+ +G   LD+L++AQ VL EW+SMRG SVSL D Y+SSDSYSR+ M
Sbjct: 353  WLRDVSDNLFYSLVKHHGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISSDSYSRENM 412

Query: 541  MEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENENA-----EVLEVSLEKKAVLNKV 705
            ++ V  GLQE ER   I+ L++    D L    +E++N+     E + +  +K A L++ 
Sbjct: 413  IDEVCSGLQEAERLSYIQLLMIKYNKDFLSGSLEESKNSMGFDFEFMSIMQQKSASLSQA 472

Query: 706  SIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQ 858
            S  AF++VFRD+QNLVY YAS DNSLLAM+KAGSKG+L +LVQ  +CLGLQ
Sbjct: 473  SASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHSMCLGLQ 523


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Solanum tuberosum]
          Length = 1446

 Score =  321 bits (822), Expect = 3e-85
 Identities = 166/291 (57%), Positives = 216/291 (74%), Gaps = 5/291 (1%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQSI+SR+EL ELV L  QL++GQNG+NLLSL HDSLTA +L+ E GVFL+RFQMQQL+M
Sbjct: 446  PQSIDSRIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQM 505

Query: 181  LCPRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLEST 360
             CPRQL   AI+KAPP     WTGKQL S+LLP   ++ FPSNGV I++GEI++SS  S+
Sbjct: 506  FCPRQLGMTAIVKAPPGNLCYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSS 565

Query: 361  WLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRKKM 540
            WL+D   N+F +LV+ +G   LD+L++AQ VL EW+SMRG SVSL D Y+SSDSYSR+ M
Sbjct: 566  WLRDVSDNLFYSLVKHHGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISSDSYSRENM 625

Query: 541  MEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENENA-----EVLEVSLEKKAVLNKV 705
            ++ V  GLQE ER   I+ L++    D L    +E++N+     E + +  +K A L++ 
Sbjct: 626  IDEVCSGLQEAERLSYIQLLMIKYNKDFLSGSLEESKNSMGFDFEFMSIMQQKSASLSQA 685

Query: 706  SIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQ 858
            S  AF++VFRD+QNLVY YAS DNSLLAM+KAGSKG+L +LVQ  +CLGLQ
Sbjct: 686  SASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHSMCLGLQ 736


>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1438

 Score =  318 bits (816), Expect = 1e-84
 Identities = 164/294 (55%), Positives = 212/294 (72%), Gaps = 7/294 (2%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQS+E+RVEL ELV L+ QLVNGQ+G NL+SL  DSLTAFYL+ E G  +N+FQMQQL M
Sbjct: 451  PQSVETRVELTELVALDKQLVNGQSGTNLMSLSQDSLTAFYLITEDGTLMNKFQMQQLNM 510

Query: 181  LCPRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLEST 360
            LCP +L  PA++K P   S  WT KQ++SM LP  FD++FPSNGVYI++GE+++SS  S+
Sbjct: 511  LCPHELPLPAVIKHPSGNSVSWTAKQIVSMFLPADFDYAFPSNGVYISNGELIASSEGSS 570

Query: 361  WLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRKKM 540
            WL+DT GN+F +L      + LDI FSAQ VL EW+SMRG SVSL D YL+SD+ SRK +
Sbjct: 571  WLRDTSGNLFQSLTEHCHGQVLDIFFSAQGVLCEWLSMRGLSVSLSDLYLASDTCSRKNL 630

Query: 541  MEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENENAEVLEVSLE-------KKAVLN 699
            ME + YGLQE E    I+QL++D   D L+ Y DEN++   L    E       K A L+
Sbjct: 631  MEEIFYGLQEAEEACTIRQLMLDSFQDFLMGY-DENKSQSPLTFGSEHFCYQKQKTAALS 689

Query: 700  KVSIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQY 861
            +V++ A +E FRD+QNL Y+YA  DNSLLAM KAGSKG++ +LVQ  +CLGLQ+
Sbjct: 690  QVTVDAIKEGFRDVQNLAYKYAGVDNSLLAMFKAGSKGNMLKLVQHCMCLGLQH 743


>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
            lycopersicum]
          Length = 1446

 Score =  316 bits (809), Expect = 8e-84
 Identities = 164/291 (56%), Positives = 214/291 (73%), Gaps = 5/291 (1%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQSI+S +EL ELV L  QL++GQNG+NLLSL HDSLTA +L+ E GVFL+RFQMQQL+M
Sbjct: 446  PQSIDSTIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQM 505

Query: 181  LCPRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLEST 360
             CPRQL   AI+KAPP     WTGKQL S+LLP   ++ FPSNGV I++GEI++SS  S+
Sbjct: 506  FCPRQLGMTAIVKAPPGNICYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSS 565

Query: 361  WLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRKKM 540
            WL+D   N+F +LV+  G   LD+L++AQ VL EW+SMRG SVSL D Y+S+DSYSR+ M
Sbjct: 566  WLRDASDNLFYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISADSYSRENM 625

Query: 541  MEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENENA-----EVLEVSLEKKAVLNKV 705
            ++ V  GLQE ER   I+ L++    D L    +E++N+     E + +  +K A L++ 
Sbjct: 626  IDEVCSGLQEAERLSYIQLLMIKYNKDFLSGNLEESKNSMGFDFEFMSIMQQKSASLSQA 685

Query: 706  SIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQ 858
            S  AF++VFRD+QNLVY YAS DNSLLAM+KAGSKG+L +LVQ  +CLGLQ
Sbjct: 686  SASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHNMCLGLQ 736


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score =  316 bits (809), Expect = 8e-84
 Identities = 164/291 (56%), Positives = 214/291 (73%), Gaps = 5/291 (1%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQSI+S +EL ELV L  QL++GQNG+NLLSL HDSLTA +L+ E GVFL+RFQMQQL+M
Sbjct: 138  PQSIDSTIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQM 197

Query: 181  LCPRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLEST 360
             CPRQL   AI+KAPP     WTGKQL S+LLP   ++ FPSNGV I++GEI++SS  S+
Sbjct: 198  FCPRQLGMTAIVKAPPGNICYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSS 257

Query: 361  WLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRKKM 540
            WL+D   N+F +LV+  G   LD+L++AQ VL EW+SMRG SVSL D Y+S+DSYSR+ M
Sbjct: 258  WLRDASDNLFYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISADSYSRENM 317

Query: 541  MEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENENA-----EVLEVSLEKKAVLNKV 705
            ++ V  GLQE ER   I+ L++    D L    +E++N+     E + +  +K A L++ 
Sbjct: 318  IDEVCSGLQEAERLSYIQLLMIKYNKDFLSGNLEESKNSMGFDFEFMSIMQQKSASLSQA 377

Query: 706  SIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQ 858
            S  AF++VFRD+QNLVY YAS DNSLLAM+KAGSKG+L +LVQ  +CLGLQ
Sbjct: 378  SASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHNMCLGLQ 428


>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
            [Cicer arietinum]
          Length = 1474

 Score =  309 bits (792), Expect = 8e-82
 Identities = 160/292 (54%), Positives = 210/292 (71%), Gaps = 5/292 (1%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQS+ +RVEL ELV L+ QL+NGQ+GRNLLSL  DSLTA YLL E GV LN +QMQQL+M
Sbjct: 467  PQSVGARVELNELVALDKQLINGQSGRNLLSLSQDSLTAAYLLLEDGVLLNVYQMQQLQM 526

Query: 181  LCPRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLEST 360
             C R+L+ PAI+KAP   +  W+GKQL SML+P  FD++FPS+GV++ DGE++S S  S 
Sbjct: 527  HCSRKLIPPAIVKAPSSNTSCWSGKQLFSMLMPSSFDYAFPSDGVFVCDGELISCSEASG 586

Query: 361  WLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRKKM 540
            WL+D++ N+F +LV  +  K LDIL  AQ+ L EW+SM GFSVSL D YLSSDSY+RK M
Sbjct: 587  WLRDSDNNVFQSLVEHFQGKTLDILHGAQKALCEWLSMTGFSVSLSDLYLSSDSYARKNM 646

Query: 541  MEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENENAEVLEVSL-----EKKAVLNKV 705
            +E +SYGLQE E+     QL+VD   D L     E EN   ++V       +  A L++ 
Sbjct: 647  IEEISYGLQEAEQACDFNQLLVDYCCDFLSGSLQEIENLVAVDVDCLNYERQISAALSQA 706

Query: 706  SIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQY 861
            S+ AFR+VFR++Q+L  +YA +DN+ LAM KAGSKG+L +LVQ  +CLGLQ+
Sbjct: 707  SVDAFRQVFRNIQSLADKYACKDNAFLAMFKAGSKGNLLKLVQHSMCLGLQH 758


>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
            [Cicer arietinum] gi|502160026|ref|XP_004511608.1|
            PREDICTED: DNA-directed RNA polymerase D subunit 1-like
            isoform X2 [Cicer arietinum]
            gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
            RNA polymerase D subunit 1-like isoform X3 [Cicer
            arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
            DNA-directed RNA polymerase D subunit 1-like isoform X4
            [Cicer arietinum]
          Length = 1475

 Score =  309 bits (792), Expect = 8e-82
 Identities = 160/292 (54%), Positives = 210/292 (71%), Gaps = 5/292 (1%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQS+ +RVEL ELV L+ QL+NGQ+GRNLLSL  DSLTA YLL E GV LN +QMQQL+M
Sbjct: 467  PQSVGARVELNELVALDKQLINGQSGRNLLSLSQDSLTAAYLLLEDGVLLNVYQMQQLQM 526

Query: 181  LCPRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLEST 360
             C R+L+ PAI+KAP   +  W+GKQL SML+P  FD++FPS+GV++ DGE++S S  S 
Sbjct: 527  HCSRKLIPPAIVKAPSSNTSCWSGKQLFSMLMPSSFDYAFPSDGVFVCDGELISCSEASG 586

Query: 361  WLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRKKM 540
            WL+D++ N+F +LV  +  K LDIL  AQ+ L EW+SM GFSVSL D YLSSDSY+RK M
Sbjct: 587  WLRDSDNNVFQSLVEHFQGKTLDILHGAQKALCEWLSMTGFSVSLSDLYLSSDSYARKNM 646

Query: 541  MEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENENAEVLEVSL-----EKKAVLNKV 705
            +E +SYGLQE E+     QL+VD   D L     E EN   ++V       +  A L++ 
Sbjct: 647  IEEISYGLQEAEQACDFNQLLVDYCCDFLSGSLQEIENLVAVDVDCLNYERQISAALSQA 706

Query: 706  SIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQY 861
            S+ AFR+VFR++Q+L  +YA +DN+ LAM KAGSKG+L +LVQ  +CLGLQ+
Sbjct: 707  SVDAFRQVFRNIQSLADKYACKDNAFLAMFKAGSKGNLLKLVQHSMCLGLQH 758


>ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Glycine
            max]
          Length = 1369

 Score =  304 bits (778), Expect = 3e-80
 Identities = 158/293 (53%), Positives = 214/293 (73%), Gaps = 7/293 (2%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQS+ +R+EL ELV L+ QL+NGQ+GRNLLSL  DSLTA YLL E GV LN +QMQQL+M
Sbjct: 370  PQSVTARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQM 429

Query: 181  LC--PRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLE 354
            L    ++L+ PA++KAP   S +W+GKQ+ SMLLP  FD+SFPS+GV ++DGE++SSS  
Sbjct: 430  LSISDKRLIPPAVVKAPSSNSSLWSGKQIFSMLLPYDFDYSFPSDGVVVSDGELVSSSEA 489

Query: 355  STWLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRK 534
            S WL+D++ N+F +LV  Y  K L+ L++AQ+VL EW+SM GFSVSL D YLSSDSY+RK
Sbjct: 490  SGWLRDSDYNVFQSLVEHYQGKTLNFLYTAQKVLCEWLSMTGFSVSLSDLYLSSDSYARK 549

Query: 535  KMMEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENEN-----AEVLEVSLEKKAVLN 699
             M+E + YGLQ+ E+    KQL++D   D L     E+EN     A+ L    +  A L+
Sbjct: 550  NMIEEIFYGLQDAEQACNFKQLLLDCYCDFLSGSIQESENAITVDADRLNYERQISAALS 609

Query: 700  KVSIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQ 858
            + S+ AFR+VFR++Q+L  +YA +DN+ LAM KAGSKG+L +LVQ  +CLG+Q
Sbjct: 610  QASVDAFRQVFRNIQSLADKYACKDNAFLAMFKAGSKGNLLKLVQHSMCLGMQ 662


>ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
            gi|561031869|gb|ESW30448.1| hypothetical protein
            PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1464

 Score =  303 bits (775), Expect = 7e-80
 Identities = 159/291 (54%), Positives = 206/291 (70%), Gaps = 5/291 (1%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQS+ +RVEL ELV L+ QL NGQ+GRNLLSL  DSLTA YLL E GV L+ +QMQQL+M
Sbjct: 454  PQSVSARVELSELVALDKQLFNGQSGRNLLSLSEDSLTAAYLLMEDGVLLDVYQMQQLQM 513

Query: 181  LCPRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLEST 360
            LC + L  PAI+K+P   S  W+GKQL SMLLP  FD+SFPS+GV ++DGE++SS   S 
Sbjct: 514  LCNKGLAPPAIVKSPSSNSSFWSGKQLFSMLLPSDFDYSFPSDGVVVSDGELVSSFEASG 573

Query: 361  WLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRKKM 540
            WL+D++ N+F  LV  +  K+L+ LF+AQ VL EW+SM GFSVSL D YLSSDSY+RK M
Sbjct: 574  WLRDSDCNVFQGLVEHFQGKSLNFLFAAQNVLCEWLSMTGFSVSLSDLYLSSDSYARKNM 633

Query: 541  MEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENEN-----AEVLEVSLEKKAVLNKV 705
            +E + YGLQ+ E+    KQL++D   D L    +E+EN     A+ L    +  A L++ 
Sbjct: 634  IEEICYGLQDAEKACNFKQLLLDCYCDFLSGNHEESENSMTVDADSLNYERQISAALSQA 693

Query: 706  SIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQ 858
            S+ AFR VFR++Q+L  +YA  DN+ LAM KAGSK SL RL Q  +CLG+Q
Sbjct: 694  SVDAFRHVFRNIQSLADKYACTDNTFLAMNKAGSKSSLVRLAQHSMCLGMQ 744


>ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
            gi|561031868|gb|ESW30447.1| hypothetical protein
            PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1463

 Score =  303 bits (775), Expect = 7e-80
 Identities = 159/291 (54%), Positives = 206/291 (70%), Gaps = 5/291 (1%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQS+ +RVEL ELV L+ QL NGQ+GRNLLSL  DSLTA YLL E GV L+ +QMQQL+M
Sbjct: 454  PQSVSARVELSELVALDKQLFNGQSGRNLLSLSEDSLTAAYLLMEDGVLLDVYQMQQLQM 513

Query: 181  LCPRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLEST 360
            LC + L  PAI+K+P   S  W+GKQL SMLLP  FD+SFPS+GV ++DGE++SS   S 
Sbjct: 514  LCNKGLAPPAIVKSPSSNSSFWSGKQLFSMLLPSDFDYSFPSDGVVVSDGELVSSFEASG 573

Query: 361  WLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRKKM 540
            WL+D++ N+F  LV  +  K+L+ LF+AQ VL EW+SM GFSVSL D YLSSDSY+RK M
Sbjct: 574  WLRDSDCNVFQGLVEHFQGKSLNFLFAAQNVLCEWLSMTGFSVSLSDLYLSSDSYARKNM 633

Query: 541  MEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENEN-----AEVLEVSLEKKAVLNKV 705
            +E + YGLQ+ E+    KQL++D   D L    +E+EN     A+ L    +  A L++ 
Sbjct: 634  IEEICYGLQDAEKACNFKQLLLDCYCDFLSGNHEESENSMTVDADSLNYERQISAALSQA 693

Query: 706  SIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQ 858
            S+ AFR VFR++Q+L  +YA  DN+ LAM KAGSK SL RL Q  +CLG+Q
Sbjct: 694  SVDAFRHVFRNIQSLADKYACTDNTFLAMNKAGSKSSLVRLAQHSMCLGMQ 744


>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1687

 Score =  303 bits (775), Expect = 7e-80
 Identities = 157/292 (53%), Positives = 205/292 (70%), Gaps = 5/292 (1%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQS+ +RVEL ELV L+ QL+NGQ+G NLLSL  DSLTA +LL E GV  N +Q+QQLEM
Sbjct: 624  PQSVGARVELNELVALDRQLINGQSGGNLLSLSQDSLTAAHLLLEDGVGFNIYQVQQLEM 683

Query: 181  LCPRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLEST 360
            LC ++L  PAI KAP   +P W+GKQL SMLLP  FD++FPSN V++ DGE++S S  S 
Sbjct: 684  LCNKELTSPAIFKAPSSNTPFWSGKQLFSMLLPSKFDYAFPSNDVFVKDGELISCSESSG 743

Query: 361  WLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRKKM 540
            WL+D+E N+F +LV  +  K LD+L  AQ+ L EW+SM GFSVSL D YLSSDSY+RK M
Sbjct: 744  WLRDSENNVFQSLVEHFQGKILDVLHGAQKALCEWLSMTGFSVSLSDLYLSSDSYARKNM 803

Query: 541  MEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENENAEVLEV-----SLEKKAVLNKV 705
            ME +SYGL+  E+     QL+VD   D L    +ENE    ++V       +  A  ++ 
Sbjct: 804  MEEISYGLRVAEQACDFNQLLVDHYSDFLSASPEENEKFVTVDVDRLNHERQISAAQSQA 863

Query: 706  SIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQY 861
            S+ AFR VFR++Q+L  ++A +DNS LAM KAGSKG+L +LVQ  +CLGLQ+
Sbjct: 864  SVDAFRHVFRNIQSLADKHACKDNSFLAMFKAGSKGNLLKLVQHSMCLGLQH 915


>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
            [Glycine max]
          Length = 1381

 Score =  301 bits (772), Expect = 2e-79
 Identities = 159/293 (54%), Positives = 212/293 (72%), Gaps = 7/293 (2%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQS+ +R+EL ELV L+ QL+NGQ+GRNLLSL  DSLTA YLL E GV LN +QMQQL+M
Sbjct: 379  PQSVTARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQM 438

Query: 181  LC--PRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLE 354
            L    ++L+ PA++KAP   S +W GKQL SMLLP  FD+SFPS+GV ++DGE++SSS  
Sbjct: 439  LSISNKRLIPPAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSSEA 498

Query: 355  STWLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRK 534
            S WL+D++ N+F +LV  Y  K L+ L++AQ+VL EW+SM GFSVSL D YLSSDSY+R+
Sbjct: 499  SGWLRDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLSMTGFSVSLSDLYLSSDSYARE 558

Query: 535  KMMEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENE-----NAEVLEVSLEKKAVLN 699
             M+E + YGLQ+ ER    KQL++D   D L     E+E     NA+ L    +  A L+
Sbjct: 559  NMIEEIFYGLQDAERACNFKQLLLDYYCDFLSGSLQESENAITVNADRLNYERQISASLS 618

Query: 700  KVSIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQ 858
            + S+ AFR+VFR++Q+L  +YA + NS LAM KAGSKG+L +LVQ  +CLG+Q
Sbjct: 619  QASVDAFRQVFRNIQSLADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQ 671


>ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
            [Glycine max]
          Length = 1455

 Score =  301 bits (772), Expect = 2e-79
 Identities = 159/293 (54%), Positives = 212/293 (72%), Gaps = 7/293 (2%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQS+ +R+EL ELV L+ QL+NGQ+GRNLLSL  DSLTA YLL E GV LN +QMQQL+M
Sbjct: 456  PQSVTARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQM 515

Query: 181  LC--PRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLE 354
            L    ++L+ PA++KAP   S +W GKQL SMLLP  FD+SFPS+GV ++DGE++SSS  
Sbjct: 516  LSISNKRLIPPAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSSEA 575

Query: 355  STWLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRK 534
            S WL+D++ N+F +LV  Y  K L+ L++AQ+VL EW+SM GFSVSL D YLSSDSY+R+
Sbjct: 576  SGWLRDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLSMTGFSVSLSDLYLSSDSYARE 635

Query: 535  KMMEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENE-----NAEVLEVSLEKKAVLN 699
             M+E + YGLQ+ ER    KQL++D   D L     E+E     NA+ L    +  A L+
Sbjct: 636  NMIEEIFYGLQDAERACNFKQLLLDYYCDFLSGSLQESENAITVNADRLNYERQISASLS 695

Query: 700  KVSIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQ 858
            + S+ AFR+VFR++Q+L  +YA + NS LAM KAGSKG+L +LVQ  +CLG+Q
Sbjct: 696  QASVDAFRQVFRNIQSLADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQ 748


>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Glycine max]
          Length = 1457

 Score =  301 bits (772), Expect = 2e-79
 Identities = 159/293 (54%), Positives = 212/293 (72%), Gaps = 7/293 (2%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQS+ +R+EL ELV L+ QL+NGQ+GRNLLSL  DSLTA YLL E GV LN +QMQQL+M
Sbjct: 456  PQSVTARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQM 515

Query: 181  LC--PRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLE 354
            L    ++L+ PA++KAP   S +W GKQL SMLLP  FD+SFPS+GV ++DGE++SSS  
Sbjct: 516  LSISNKRLIPPAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSSEA 575

Query: 355  STWLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRK 534
            S WL+D++ N+F +LV  Y  K L+ L++AQ+VL EW+SM GFSVSL D YLSSDSY+R+
Sbjct: 576  SGWLRDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLSMTGFSVSLSDLYLSSDSYARE 635

Query: 535  KMMEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENE-----NAEVLEVSLEKKAVLN 699
             M+E + YGLQ+ ER    KQL++D   D L     E+E     NA+ L    +  A L+
Sbjct: 636  NMIEEIFYGLQDAERACNFKQLLLDYYCDFLSGSLQESENAITVNADRLNYERQISASLS 695

Query: 700  KVSIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQ 858
            + S+ AFR+VFR++Q+L  +YA + NS LAM KAGSKG+L +LVQ  +CLG+Q
Sbjct: 696  QASVDAFRQVFRNIQSLADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQ 748


>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Glycine max]
          Length = 1458

 Score =  301 bits (772), Expect = 2e-79
 Identities = 159/293 (54%), Positives = 212/293 (72%), Gaps = 7/293 (2%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQS+ +R+EL ELV L+ QL+NGQ+GRNLLSL  DSLTA YLL E GV LN +QMQQL+M
Sbjct: 456  PQSVTARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQM 515

Query: 181  LC--PRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLE 354
            L    ++L+ PA++KAP   S +W GKQL SMLLP  FD+SFPS+GV ++DGE++SSS  
Sbjct: 516  LSISNKRLIPPAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSSEA 575

Query: 355  STWLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRK 534
            S WL+D++ N+F +LV  Y  K L+ L++AQ+VL EW+SM GFSVSL D YLSSDSY+R+
Sbjct: 576  SGWLRDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLSMTGFSVSLSDLYLSSDSYARE 635

Query: 535  KMMEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENE-----NAEVLEVSLEKKAVLN 699
             M+E + YGLQ+ ER    KQL++D   D L     E+E     NA+ L    +  A L+
Sbjct: 636  NMIEEIFYGLQDAERACNFKQLLLDYYCDFLSGSLQESENAITVNADRLNYERQISASLS 695

Query: 700  KVSIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQ 858
            + S+ AFR+VFR++Q+L  +YA + NS LAM KAGSKG+L +LVQ  +CLG+Q
Sbjct: 696  QASVDAFRQVFRNIQSLADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQ 748


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  301 bits (772), Expect = 2e-79
 Identities = 162/294 (55%), Positives = 211/294 (71%), Gaps = 7/294 (2%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQS+E+RVE+RELV L+ QL NGQ+GRNLLSL HDSLTA +L+ E GV LN FQMQQL+M
Sbjct: 472  PQSLEARVEVRELVSLDKQLTNGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQM 531

Query: 181  LCPRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLEST 360
            L   QLL PAI+K+P  ++  WTGKQL S+LLPP FD+S PS+ V+I  GE++SS   S 
Sbjct: 532  LTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELISSE-GSY 590

Query: 361  WLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRKKM 540
            WL+D+  N+F  L+     K LD L  AQ VL EW+S RG SVSL D YLS DSYS + M
Sbjct: 591  WLRDSGRNLFQALIEHCEGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYSHENM 650

Query: 541  MEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENENAEVLEVSLE-------KKAVLN 699
            M+ +  GLQE E T  +KQL+VD   + L+  G++ +N  +L +++E       K A LN
Sbjct: 651  MDDIFCGLQEAEETCNLKQLMVDSHKEILI--GNDEDNQHLLSIAVERLIYEKQKSAALN 708

Query: 700  KVSIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQY 861
            + S+ AF++VFRD+QNLVY+Y+ +DNSLL M KAGSKG+L +LVQ  +CLGLQ+
Sbjct: 709  QASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQH 762


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 1475

 Score =  289 bits (739), Expect = 1e-75
 Identities = 154/292 (52%), Positives = 206/292 (70%), Gaps = 5/292 (1%)
 Frame = +1

Query: 1    PQSIESRVELRELVGLNHQLVNGQNGRNLLSLCHDSLTAFYLLREKGVFLNRFQMQQLEM 180
            PQS+++RVELRELV L+ QL+N QNGRNLLS   DSL A +L+ E GV L+  QMQQL+M
Sbjct: 466  PQSVDTRVELRELVALDKQLINVQNGRNLLSFSQDSLVAAHLVMEDGVLLSLQQMQQLQM 525

Query: 181  LCPRQLLCPAILKAPPQQSPMWTGKQLLSMLLPPCFDFSFPSNGVYITDGEILSSSLEST 360
             CP QL  PA+ KAP      WTGKQL+SMLLP  FD   PS+ VYI DGE++SS   S 
Sbjct: 526  FCPHQLFSPAVRKAPSLNGCAWTGKQLISMLLPRGFDHECPSSDVYIRDGELISSE-GSF 584

Query: 361  WLQDTEGNIFSNLVRRYGSKALDILFSAQEVLLEWISMRGFSVSLHDFYLSSDSYSRKKM 540
            WL+DT+GN+F +L+++   + LD L+ AQEVL EW+SMRG SVSL D YL  DS SR+ M
Sbjct: 585  WLRDTDGNLFQSLIKQCQDQVLDFLYIAQEVLCEWLSMRGLSVSLSDLYLCPDSDSRENM 644

Query: 541  MEVVSYGLQEVERTGLIKQLIVDPRMDDLLRYGDENE---NAEVLEVSLEKK--AVLNKV 705
            M+ V +GLQ+ + T  +KQ +VD   D L    ++ +   N +V  +  EK+  A L++ 
Sbjct: 645  MDEVLFGLQDAKGTCNMKQFMVDSCRDFLASIDEDEQYSVNFDVEHLCHEKQRSAALSQA 704

Query: 706  SIGAFREVFRDLQNLVYQYASEDNSLLAMVKAGSKGSLPRLVQQGLCLGLQY 861
            S+ AF+ VFRD+Q L Y+YAS+DN+L+AM K+GSKG+L ++VQ  +CLGLQ+
Sbjct: 705  SVDAFKHVFRDIQTLGYKYASKDNALMAMFKSGSKGNLLKVVQHSMCLGLQH 756