BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00028820
         (1323 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containi...   484   e-134
ref|XP_007034318.1| Tetratricopeptide repeat-like superfamily pr...   451   e-124
ref|XP_006489829.1| PREDICTED: pentatricopeptide repeat-containi...   412   e-112
ref|XP_006489828.1| PREDICTED: pentatricopeptide repeat-containi...   412   e-112
ref|XP_006489827.1| PREDICTED: pentatricopeptide repeat-containi...   412   e-112
ref|XP_006489825.1| PREDICTED: pentatricopeptide repeat-containi...   412   e-112
ref|XP_002300166.1| pentatricopeptide repeat-containing family p...   412   e-112
ref|XP_002518071.1| pentatricopeptide repeat-containing protein,...   412   e-112
ref|XP_006420980.1| hypothetical protein CICLE_v10004495mg [Citr...   407   e-111
ref|XP_006420979.1| hypothetical protein CICLE_v10004495mg [Citr...   407   e-111
ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containi...   406   e-111
ref|XP_006360955.1| PREDICTED: pentatricopeptide repeat-containi...   393   e-107
ref|XP_002892245.1| pentatricopeptide repeat-containing protein ...   369   2e-99
ref|NP_171976.1| pentatricopeptide repeat-containing protein [Ar...   363   7e-98
ref|XP_006306938.1| hypothetical protein CARUB_v10008505mg, part...   362   2e-97
ref|XP_006418090.1| hypothetical protein EUTSA_v10007007mg [Eutr...   361   3e-97
ref|XP_004247960.1| PREDICTED: pentatricopeptide repeat-containi...   334   6e-89
ref|XP_004295870.1| PREDICTED: pentatricopeptide repeat-containi...   251   7e-64
ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containi...   249   2e-63
ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containi...   249   2e-63

>ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein At1g04840-like
            [Vitis vinifera]
          Length = 677

 Score =  484 bits (1245), Expect = e-134
 Identities = 244/363 (67%), Positives = 279/363 (76%)
 Frame = +3

Query: 69   ENHFISLIHTSKTTQQLKQIHAQLFLHNLSQXXXXXXXXXXXXXXXXXXDYTILIFQHFY 248
            E HFI LIH S T  QL QIHAQ+FLHNL                    DY + IF+ F 
Sbjct: 40   ETHFIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFD 99

Query: 249  SPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRLSVQPDRLTFPFVLKSAASLLAPRLGGT 428
             PN F+FNA IR L+ENS+F+ S+ HFVL LRLS++PDRLT PFVLKS A+L+   LG  
Sbjct: 100  HPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRC 159

Query: 429  LHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNILINGCC 608
            LHG ++KLGL+FDSFV VSLVDMYVK G LGF LQLFDE+ +RNK  SILL N+LINGCC
Sbjct: 160  LHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCC 219

Query: 609  KAGDLKKAMELFEAMPERNVGSWNCLINGFFKNKDLEKAQLLFDQMPEKNVVSWTTMIAG 788
            K GDL KA  LFEAMPERN GSWN LINGF +N DL++A+ LF QMPEKNVVSWTTMI G
Sbjct: 220  KVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMING 279

Query: 789  LSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACARIGALESGVQIHDYVSRNGFPLN 968
             SQN DHE+ALSMF+RML+EGVR NDLT+VSAL AC +IGAL+ G +IH+Y+S NGF LN
Sbjct: 280  FSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLN 339

Query: 969  RAIGTSLVDMYAKCGKIECASRLFGEIKEKDLLTWSVMISGWAIHGCSEQALQCFEKMKI 1148
            R IGT+LVDMYAKCG I+ ASR+F E K KDLLTWSVMI GWAIHGC +QALQCF KMK 
Sbjct: 340  RGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKS 399

Query: 1149 AGI 1157
            AGI
Sbjct: 400  AGI 402


>ref|XP_007034318.1| Tetratricopeptide repeat-like superfamily protein isoform 1
            [Theobroma cacao] gi|590656608|ref|XP_007034319.1|
            Tetratricopeptide repeat-like superfamily protein isoform
            1 [Theobroma cacao] gi|590656611|ref|XP_007034320.1|
            Tetratricopeptide repeat-like superfamily protein isoform
            1 [Theobroma cacao] gi|590656614|ref|XP_007034321.1|
            Tetratricopeptide repeat-like superfamily protein isoform
            1 [Theobroma cacao] gi|508713347|gb|EOY05244.1|
            Tetratricopeptide repeat-like superfamily protein isoform
            1 [Theobroma cacao] gi|508713348|gb|EOY05245.1|
            Tetratricopeptide repeat-like superfamily protein isoform
            1 [Theobroma cacao] gi|508713349|gb|EOY05246.1|
            Tetratricopeptide repeat-like superfamily protein isoform
            1 [Theobroma cacao] gi|508713350|gb|EOY05247.1|
            Tetratricopeptide repeat-like superfamily protein isoform
            1 [Theobroma cacao]
          Length = 682

 Score =  451 bits (1161), Expect = e-124
 Identities = 227/365 (62%), Positives = 277/365 (75%)
 Frame = +3

Query: 63   PLENHFISLIHTSKTTQQLKQIHAQLFLHNLSQXXXXXXXXXXXXXXXXXXDYTILIFQH 242
            PL+ HF SLI +SKTT QL+QIHAQ+F  NLS                    Y I +F H
Sbjct: 43   PLKTHFASLIQSSKTTLQLRQIHAQIFRRNLSSSSNLTTLLISASSSLKSIPYAISLFNH 102

Query: 243  FYSPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRLSVQPDRLTFPFVLKSAASLLAPRLG 422
            F+  + F+FNA IR L++NS  +SSI HF+L L L V+PD+LT+PFVLKS A L    LG
Sbjct: 103  FHHKSIFLFNALIRGLTDNSLLESSISHFLLMLSLGVRPDKLTYPFVLKSIAGLGLRCLG 162

Query: 423  GTLHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNILING 602
              LHG+I+K G++FDSFV V+LV+MYVK   LGFALQ+FDE+ ERNK  SILL N+LING
Sbjct: 163  LILHGRIIKSGVEFDSFVRVALVEMYVKLKELGFALQVFDESPERNKSGSILLWNVLING 222

Query: 603  CCKAGDLKKAMELFEAMPERNVGSWNCLINGFFKNKDLEKAQLLFDQMPEKNVVSWTTMI 782
             CK G+L KAMELFEA PERN+GSWN LINGF +N DL+KA  LFD+M EK+VVSWTTM+
Sbjct: 223  YCKDGNLGKAMELFEATPERNIGSWNSLINGFMRNGDLDKAVELFDEMKEKDVVSWTTMV 282

Query: 783  AGLSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACARIGALESGVQIHDYVSRNGFP 962
             G SQN DHE+ALSMF++ML+  +R NDLT+V ALSACA+IGALE+G +IHDYV  NGF 
Sbjct: 283  NGFSQNGDHEKALSMFFKMLEAALRPNDLTLVPALSACAKIGALEAGARIHDYVLENGFR 342

Query: 963  LNRAIGTSLVDMYAKCGKIECASRLFGEIKEKDLLTWSVMISGWAIHGCSEQALQCFEKM 1142
            LN+AIG +LVDMYAKCG I+ AS++F E KE+D+LTWSVMI GWAIHG  EQA+QCF+KM
Sbjct: 343  LNKAIGAALVDMYAKCGDIQSASKVFDETKERDILTWSVMIWGWAIHGYYEQAIQCFKKM 402

Query: 1143 KIAGI 1157
              +GI
Sbjct: 403  MFSGI 407


>ref|XP_006489829.1| PREDICTED: pentatricopeptide repeat-containing protein At1g04840-like
            isoform X5 [Citrus sinensis]
          Length = 457

 Score =  412 bits (1060), Expect = e-112
 Identities = 214/363 (58%), Positives = 258/363 (71%)
 Frame = +3

Query: 69   ENHFISLIHTSKTTQQLKQIHAQLFLHNLSQXXXXXXXXXXXXXXXXXXDYTILIFQHFY 248
            E H ISLIH+S +T+QL+QIHAQ+ LHNL                    DY + IF HF 
Sbjct: 31   ETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFT 90

Query: 249  SPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRLSVQPDRLTFPFVLKSAASLLAPRLGGT 428
              N  IFN  IR L+ENS FQS I HFV  LRLSV+P+RLT+PFV KS ASL    LG  
Sbjct: 91   PKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRG 150

Query: 429  LHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNILINGCC 608
            LH  IVK G+++D+FV V L DMYVK G    A ++FDET ERNK  S+LL N+LINGC 
Sbjct: 151  LHCLIVKSGVEYDAFVRVHLADMYVKLGKTRGAFKMFDETPERNKSESVLLWNVLINGCS 210

Query: 609  KAGDLKKAMELFEAMPERNVGSWNCLINGFFKNKDLEKAQLLFDQMPEKNVVSWTTMIAG 788
            K G L+KA+ELF  MP++N  SW  LI+GF +  DL+KA  LF+QMPEK VVSWT MI G
Sbjct: 211  KIGYLRKAVELFGVMPKKNAASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMING 270

Query: 789  LSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACARIGALESGVQIHDYVSRNGFPLN 968
             SQN + E AL+MF++ML  GVRAND T+VSALSACA++GALE+GV++H+Y+S N F L 
Sbjct: 271  FSQNGEAETALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLK 330

Query: 969  RAIGTSLVDMYAKCGKIECASRLFGEIKEKDLLTWSVMISGWAIHGCSEQALQCFEKMKI 1148
             AIGT+LV MYAKCG IE AS +FGE KEKDLLTW+ MI G AIHG  EQA+QCF+KM  
Sbjct: 331  GAIGTALVHMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQCFKKMMY 390

Query: 1149 AGI 1157
            +GI
Sbjct: 391  SGI 393



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 39/199 (19%)
 Frame = +3

Query: 480 VSLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNILINGCCKAGDLKKAMELFEAMPE 659
           VSL+D +++ G L  A +LF++  E+  VS       +ING  + G+ + A+ +F  M +
Sbjct: 234 VSLIDGFMRKGDLKKAGELFEQMPEKGVVSW----TAMINGFSQNGEAETALAMFFQMLD 289

Query: 660 RNVGS---------------------------------------WNCLINGFFKNKDLEK 722
             V +                                          L++ + K  ++E 
Sbjct: 290 AGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVHMYAKCGNIEA 349

Query: 723 AQLLFDQMPEKNVVSWTTMIAGLSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACAR 902
           A L+F +  EK++++WT MI GL+ +  +EQA+  F +M+  G+  +    ++ L+AC  
Sbjct: 350 ASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQCFKKMMYSGIEPDGTVFLAILTACWY 409

Query: 903 IGALESGVQIHDYVSRNGF 959
            G ++  +   D +S + F
Sbjct: 410 SGQVKLALNFFDSMSFDYF 428


>ref|XP_006489828.1| PREDICTED: pentatricopeptide repeat-containing protein At1g04840-like
            isoform X4 [Citrus sinensis]
          Length = 458

 Score =  412 bits (1060), Expect = e-112
 Identities = 214/363 (58%), Positives = 258/363 (71%)
 Frame = +3

Query: 69   ENHFISLIHTSKTTQQLKQIHAQLFLHNLSQXXXXXXXXXXXXXXXXXXDYTILIFQHFY 248
            E H ISLIH+S +T+QL+QIHAQ+ LHNL                    DY + IF HF 
Sbjct: 31   ETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFT 90

Query: 249  SPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRLSVQPDRLTFPFVLKSAASLLAPRLGGT 428
              N  IFN  IR L+ENS FQS I HFV  LRLSV+P+RLT+PFV KS ASL    LG  
Sbjct: 91   PKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRG 150

Query: 429  LHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNILINGCC 608
            LH  IVK G+++D+FV V L DMYVK G    A ++FDET ERNK  S+LL N+LINGC 
Sbjct: 151  LHCLIVKSGVEYDAFVRVHLADMYVKLGKTRGAFKMFDETPERNKSESVLLWNVLINGCS 210

Query: 609  KAGDLKKAMELFEAMPERNVGSWNCLINGFFKNKDLEKAQLLFDQMPEKNVVSWTTMIAG 788
            K G L+KA+ELF  MP++N  SW  LI+GF +  DL+KA  LF+QMPEK VVSWT MI G
Sbjct: 211  KIGYLRKAVELFGVMPKKNAASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMING 270

Query: 789  LSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACARIGALESGVQIHDYVSRNGFPLN 968
             SQN + E AL+MF++ML  GVRAND T+VSALSACA++GALE+GV++H+Y+S N F L 
Sbjct: 271  FSQNGEAETALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLK 330

Query: 969  RAIGTSLVDMYAKCGKIECASRLFGEIKEKDLLTWSVMISGWAIHGCSEQALQCFEKMKI 1148
             AIGT+LV MYAKCG IE AS +FGE KEKDLLTW+ MI G AIHG  EQA+QCF+KM  
Sbjct: 331  GAIGTALVHMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQCFKKMMY 390

Query: 1149 AGI 1157
            +GI
Sbjct: 391  SGI 393



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 39/199 (19%)
 Frame = +3

Query: 480 VSLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNILINGCCKAGDLKKAMELFEAMPE 659
           VSL+D +++ G L  A +LF++  E+  VS       +ING  + G+ + A+ +F  M +
Sbjct: 234 VSLIDGFMRKGDLKKAGELFEQMPEKGVVSW----TAMINGFSQNGEAETALAMFFQMLD 289

Query: 660 RNVGS---------------------------------------WNCLINGFFKNKDLEK 722
             V +                                          L++ + K  ++E 
Sbjct: 290 AGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVHMYAKCGNIEA 349

Query: 723 AQLLFDQMPEKNVVSWTTMIAGLSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACAR 902
           A L+F +  EK++++WT MI GL+ +  +EQA+  F +M+  G+  +    ++ L+AC  
Sbjct: 350 ASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQCFKKMMYSGIEPDGTVFLAILTACWY 409

Query: 903 IGALESGVQIHDYVSRNGF 959
            G ++  +   D +S + F
Sbjct: 410 SGQVKLALNFFDSMSFDYF 428


>ref|XP_006489827.1| PREDICTED: pentatricopeptide repeat-containing protein At1g04840-like
            isoform X3 [Citrus sinensis]
          Length = 466

 Score =  412 bits (1060), Expect = e-112
 Identities = 214/363 (58%), Positives = 258/363 (71%)
 Frame = +3

Query: 69   ENHFISLIHTSKTTQQLKQIHAQLFLHNLSQXXXXXXXXXXXXXXXXXXDYTILIFQHFY 248
            E H ISLIH+S +T+QL+QIHAQ+ LHNL                    DY + IF HF 
Sbjct: 31   ETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFT 90

Query: 249  SPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRLSVQPDRLTFPFVLKSAASLLAPRLGGT 428
              N  IFN  IR L+ENS FQS I HFV  LRLSV+P+RLT+PFV KS ASL    LG  
Sbjct: 91   PKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRG 150

Query: 429  LHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNILINGCC 608
            LH  IVK G+++D+FV V L DMYVK G    A ++FDET ERNK  S+LL N+LINGC 
Sbjct: 151  LHCLIVKSGVEYDAFVRVHLADMYVKLGKTRGAFKMFDETPERNKSESVLLWNVLINGCS 210

Query: 609  KAGDLKKAMELFEAMPERNVGSWNCLINGFFKNKDLEKAQLLFDQMPEKNVVSWTTMIAG 788
            K G L+KA+ELF  MP++N  SW  LI+GF +  DL+KA  LF+QMPEK VVSWT MI G
Sbjct: 211  KIGYLRKAVELFGVMPKKNAASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMING 270

Query: 789  LSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACARIGALESGVQIHDYVSRNGFPLN 968
             SQN + E AL+MF++ML  GVRAND T+VSALSACA++GALE+GV++H+Y+S N F L 
Sbjct: 271  FSQNGEAETALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLK 330

Query: 969  RAIGTSLVDMYAKCGKIECASRLFGEIKEKDLLTWSVMISGWAIHGCSEQALQCFEKMKI 1148
             AIGT+LV MYAKCG IE AS +FGE KEKDLLTW+ MI G AIHG  EQA+QCF+KM  
Sbjct: 331  GAIGTALVHMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQCFKKMMY 390

Query: 1149 AGI 1157
            +GI
Sbjct: 391  SGI 393



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 39/199 (19%)
 Frame = +3

Query: 480 VSLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNILINGCCKAGDLKKAMELFEAMPE 659
           VSL+D +++ G L  A +LF++  E+  VS       +ING  + G+ + A+ +F  M +
Sbjct: 234 VSLIDGFMRKGDLKKAGELFEQMPEKGVVSW----TAMINGFSQNGEAETALAMFFQMLD 289

Query: 660 RNVGS---------------------------------------WNCLINGFFKNKDLEK 722
             V +                                          L++ + K  ++E 
Sbjct: 290 AGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVHMYAKCGNIEA 349

Query: 723 AQLLFDQMPEKNVVSWTTMIAGLSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACAR 902
           A L+F +  EK++++WT MI GL+ +  +EQA+  F +M+  G+  +    ++ L+AC  
Sbjct: 350 ASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQCFKKMMYSGIEPDGTVFLAILTACWY 409

Query: 903 IGALESGVQIHDYVSRNGF 959
            G ++  +   D +S + F
Sbjct: 410 SGQVKLALNFFDSMSFDYF 428


>ref|XP_006489825.1| PREDICTED: pentatricopeptide repeat-containing protein At1g04840-like
            isoform X1 [Citrus sinensis]
            gi|568873396|ref|XP_006489826.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At1g04840-like isoform X2 [Citrus sinensis]
          Length = 664

 Score =  412 bits (1060), Expect = e-112
 Identities = 214/363 (58%), Positives = 258/363 (71%)
 Frame = +3

Query: 69   ENHFISLIHTSKTTQQLKQIHAQLFLHNLSQXXXXXXXXXXXXXXXXXXDYTILIFQHFY 248
            E H ISLIH+S +T+QL+QIHAQ+ LHNL                    DY + IF HF 
Sbjct: 31   ETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFT 90

Query: 249  SPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRLSVQPDRLTFPFVLKSAASLLAPRLGGT 428
              N  IFN  IR L+ENS FQS I HFV  LRLSV+P+RLT+PFV KS ASL    LG  
Sbjct: 91   PKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRG 150

Query: 429  LHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNILINGCC 608
            LH  IVK G+++D+FV V L DMYVK G    A ++FDET ERNK  S+LL N+LINGC 
Sbjct: 151  LHCLIVKSGVEYDAFVRVHLADMYVKLGKTRGAFKMFDETPERNKSESVLLWNVLINGCS 210

Query: 609  KAGDLKKAMELFEAMPERNVGSWNCLINGFFKNKDLEKAQLLFDQMPEKNVVSWTTMIAG 788
            K G L+KA+ELF  MP++N  SW  LI+GF +  DL+KA  LF+QMPEK VVSWT MI G
Sbjct: 211  KIGYLRKAVELFGVMPKKNAASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMING 270

Query: 789  LSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACARIGALESGVQIHDYVSRNGFPLN 968
             SQN + E AL+MF++ML  GVRAND T+VSALSACA++GALE+GV++H+Y+S N F L 
Sbjct: 271  FSQNGEAETALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLK 330

Query: 969  RAIGTSLVDMYAKCGKIECASRLFGEIKEKDLLTWSVMISGWAIHGCSEQALQCFEKMKI 1148
             AIGT+LV MYAKCG IE AS +FGE KEKDLLTW+ MI G AIHG  EQA+QCF+KM  
Sbjct: 331  GAIGTALVHMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQCFKKMMY 390

Query: 1149 AGI 1157
            +GI
Sbjct: 391  SGI 393



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 55/250 (22%), Positives = 113/250 (45%), Gaps = 42/250 (16%)
 Frame = +3

Query: 480  VSLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNILINGCCKAGDLKKAMELFEAMPE 659
            VSL+D +++ G L  A +LF++  E+  VS       +ING  + G+ + A+ +F  M +
Sbjct: 234  VSLIDGFMRKGDLKKAGELFEQMPEKGVVSW----TAMINGFSQNGEAETALAMFFQMLD 289

Query: 660  RNVGS---------------------------------------WNCLINGFFKNKDLEK 722
              V +                                          L++ + K  ++E 
Sbjct: 290  AGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVHMYAKCGNIEA 349

Query: 723  AQLLFDQMPEKNVVSWTTMIAGLSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACAR 902
            A L+F +  EK++++WT MI GL+ +  +EQA+  F +M+  G+  +    ++ L+AC  
Sbjct: 350  ASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQCFKKMMYSGIEPDGTVFLAILTACWY 409

Query: 903  IGALESGVQIHDYVSRNGFPLNRAIG--TSLVDMYAKCGKIECASRLFGEIKE-KDLLTW 1073
             G ++  +   D +S + F +  ++   T +V++ ++ G+++ A     ++ E  D + W
Sbjct: 410  SGQVKLALNFFDSMSFDYF-IEPSVKHYTVVVNLLSRVGQVDKALNFINKMPETPDFMIW 468

Query: 1074 SVMISGWAIH 1103
              +      H
Sbjct: 469  GALFCACRTH 478


>ref|XP_002300166.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|222847424|gb|EEE84971.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 719

 Score =  412 bits (1059), Expect = e-112
 Identities = 209/367 (56%), Positives = 264/367 (71%), Gaps = 1/367 (0%)
 Frame = +3

Query: 60   TPLENHFISLIHTSKTTQQLKQIHAQLFLHNLSQXXXXXXXXXXXXXXXXXXDYTILIFQ 239
            TP E HFISLIH SKT  QL QIHAQ+ +HNLS                   ++++ +F 
Sbjct: 78   TPTEAHFISLIHGSKTILQLHQIHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFN 137

Query: 240  HFYSPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRLSVQPDRLTFPFVLKSAASLLAPRL 419
            H    N F FNA IR L+ NS F ++IFHF L LR  ++PDRLT+PFVLKS A L +  L
Sbjct: 138  HHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTEL 197

Query: 420  GGTLHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLER-NKVSSILLRNILI 596
            G  +H  I++ G++ DSFV VSLVDMYVK   LG A ++FDE+ ER +  SS LL N+LI
Sbjct: 198  GMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLI 257

Query: 597  NGCCKAGDLKKAMELFEAMPERNVGSWNCLINGFFKNKDLEKAQLLFDQMPEKNVVSWTT 776
             GCCKAG +KKA++LF+AMP++   SW+ LI+GF KN D+++A  LFDQMPEKNVVSWTT
Sbjct: 258  KGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTT 317

Query: 777  MIAGLSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACARIGALESGVQIHDYVSRNG 956
            M+ G S+N D E+ALSMF +ML+EGVR N  TIVSALSACA+IG LE+G++IH Y+  NG
Sbjct: 318  MVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNG 377

Query: 957  FPLNRAIGTSLVDMYAKCGKIECASRLFGEIKEKDLLTWSVMISGWAIHGCSEQALQCFE 1136
              L  A+GT+LVDMYAKCG IE AS +FGE ++K + TW+VMI GWAIHG SEQA+ CF+
Sbjct: 378  LHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFK 437

Query: 1137 KMKIAGI 1157
            +M  AGI
Sbjct: 438  QMMFAGI 444



 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 57/262 (21%), Positives = 116/262 (44%), Gaps = 42/262 (16%)
 Frame = +3

Query: 483  SLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNILINGCCKAGDLKKAMELFEAMPER 662
            +L+D + K G +  A++LFD+  E+N VS       +++G  + GD +KA+ +F  M E 
Sbjct: 286  TLIDGFAKNGDMDRAMELFDQMPEKNVVSW----TTMVDGFSRNGDSEKALSMFSKMLEE 341

Query: 663  NV---------------------------------------GSWNCLINGFFKNKDLEKA 725
             V                                            L++ + K  ++E A
Sbjct: 342  GVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESA 401

Query: 726  QLLFDQMPEKNVVSWTTMIAGLSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACARI 905
              +F +  +K++ +WT MI G + +   EQA++ F +M+  G++ +++  ++ L+AC   
Sbjct: 402  SEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHS 461

Query: 906  GALESGVQIHDYVSRNGFPLNRAIG--TSLVDMYAKCGKIECASRLFGEI-KEKDLLTWS 1076
            G ++ G+   D + R  + +  ++   T +VDM  + G+++ A R    +    D + W 
Sbjct: 462  GQVDIGLNFFDSM-RLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWG 520

Query: 1077 VMISGWAIHGCSEQALQCFEKM 1142
             +      H  ++ A     K+
Sbjct: 521  ALFCACRAHKKTKMAKFALNKL 542


>ref|XP_002518071.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223542667|gb|EEF44204.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 404

 Score =  412 bits (1058), Expect = e-112
 Identities = 207/364 (56%), Positives = 261/364 (71%)
 Frame = +3

Query: 66   LENHFISLIHTSKTTQQLKQIHAQLFLHNLSQXXXXXXXXXXXXXXXXXXDYTILIFQHF 245
            +E H I LIH+SKT  QL QIH Q+ LHNLS                    Y++ IF  +
Sbjct: 34   IETHIIPLIHSSKTALQLHQIHTQILLHNLSSSSHITAQLISSSSLRKSIAYSLSIFNSY 93

Query: 246  YSPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRLSVQPDRLTFPFVLKSAASLLAPRLGG 425
            +  N ++FNA IR L++N ++  SI HF+L LR  ++PD LTF FVLKS ASL    L  
Sbjct: 94   HPKNLYLFNALIRGLTDNYRYLDSIDHFILLLRSDIKPDHLTFSFVLKSIASLSLKGLAR 153

Query: 426  TLHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNILINGC 605
             LHG I++ GL+FDSFV +S+VD+YVK   +  AL++FDE+ +R    S LL N+LINGC
Sbjct: 154  ALHGMILRCGLEFDSFVRISMVDVYVKLEEVKLALKVFDESPQRFHEGSTLLWNVLINGC 213

Query: 606  CKAGDLKKAMELFEAMPERNVGSWNCLINGFFKNKDLEKAQLLFDQMPEKNVVSWTTMIA 785
            CK GD++KA+ELFE MP RN  SWN LINGFFK  DLE+A   FD+MP K+VVSWTTM+ 
Sbjct: 214  CKVGDMRKALELFEDMPLRNTASWNSLINGFFKIGDLEQAIEHFDRMPVKDVVSWTTMVN 273

Query: 786  GLSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACARIGALESGVQIHDYVSRNGFPL 965
            G SQN DHE+ALS+F RML E V+ ND TIVSALSACA+IGALE+G++IH Y+  NGF L
Sbjct: 274  GFSQNGDHEKALSVFSRMLDEDVKPNDFTIVSALSACAKIGALEAGLRIHKYLKDNGFRL 333

Query: 966  NRAIGTSLVDMYAKCGKIECASRLFGEIKEKDLLTWSVMISGWAIHGCSEQALQCFEKMK 1145
            NRA+G +LVDM+AKCG I  AS++F E KEKD++TWSVMI GWAIHG  E+A+QCF++M 
Sbjct: 334  NRAVGNALVDMHAKCGNINSASQVFKEAKEKDIITWSVMIWGWAIHGHFEEAIQCFKQMM 393

Query: 1146 IAGI 1157
             AGI
Sbjct: 394  YAGI 397


>ref|XP_006420980.1| hypothetical protein CICLE_v10004495mg [Citrus clementina]
            gi|557522853|gb|ESR34220.1| hypothetical protein
            CICLE_v10004495mg [Citrus clementina]
          Length = 664

 Score =  407 bits (1047), Expect = e-111
 Identities = 212/362 (58%), Positives = 259/362 (71%)
 Frame = +3

Query: 69   ENHFISLIHTSKTTQQLKQIHAQLFLHNLSQXXXXXXXXXXXXXXXXXXDYTILIFQHFY 248
            E H ISLIH+S +T+QL+QIHAQ+ LHNL                    DY + IF HF 
Sbjct: 31   ETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSTDYALSIFGHFT 90

Query: 249  SPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRLSVQPDRLTFPFVLKSAASLLAPRLGGT 428
              N  IFN  IR L+ENS FQS I HFV  LRLSV+P+RLT+PFV KS ASL    LG  
Sbjct: 91   PKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRG 150

Query: 429  LHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNILINGCC 608
            LH  IVK G+++D+FV V L DMYV+ G    A ++FDET E+NK  S+LL N+LINGC 
Sbjct: 151  LHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCS 210

Query: 609  KAGDLKKAMELFEAMPERNVGSWNCLINGFFKNKDLEKAQLLFDQMPEKNVVSWTTMIAG 788
            K G L+KA+ELF  MP++NV SW  LI+GF +  DL+KA  LF+QMPEK VVSWT MI G
Sbjct: 211  KIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMING 270

Query: 789  LSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACARIGALESGVQIHDYVSRNGFPLN 968
             SQN + E+AL+MF++ML  GVRAND T+VSALSACA++GALE+GV++H+Y+S N F L 
Sbjct: 271  FSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLK 330

Query: 969  RAIGTSLVDMYAKCGKIECASRLFGEIKEKDLLTWSVMISGWAIHGCSEQALQCFEKMKI 1148
             AIGT+LVDMYAKCG IE AS +FGE KEKDLLTW+ MI G AIHG  EQA+Q F+KM  
Sbjct: 331  GAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMY 390

Query: 1149 AG 1154
            +G
Sbjct: 391  SG 392



 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 55/250 (22%), Positives = 112/250 (44%), Gaps = 42/250 (16%)
 Frame = +3

Query: 480  VSLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNILINGCCKAGDLKKAMELFEAMPE 659
            VSL+D +++ G L  A +LF++  E+  VS       +ING  + G+ +KA+ +F  M +
Sbjct: 234  VSLIDGFMRKGDLKKAGELFEQMPEKGVVSW----TAMINGFSQNGEAEKALAMFFQMLD 289

Query: 660  RNVGS---------------------------------------WNCLINGFFKNKDLEK 722
              V +                                          L++ + K  ++E 
Sbjct: 290  AGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEA 349

Query: 723  AQLLFDQMPEKNVVSWTTMIAGLSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACAR 902
            A L+F +  EK++++WT MI GL+ +  +EQA+  F +M+  G   +    ++ L+AC  
Sbjct: 350  ASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWY 409

Query: 903  IGALESGVQIHDYVSRNGFPLNRAI--GTSLVDMYAKCGKIECASRLFGEIKE-KDLLTW 1073
             G ++  +   D + R  + +  ++   T +V++ ++ G+++ A     ++ E  D + W
Sbjct: 410  SGQVKLALNFFDSM-RFDYFIEPSVKHHTVVVNLLSRVGQVDKALNFINKMPETPDFVIW 468

Query: 1074 SVMISGWAIH 1103
              +      H
Sbjct: 469  GALFCACRTH 478


>ref|XP_006420979.1| hypothetical protein CICLE_v10004495mg [Citrus clementina]
            gi|557522852|gb|ESR34219.1| hypothetical protein
            CICLE_v10004495mg [Citrus clementina]
          Length = 466

 Score =  407 bits (1047), Expect = e-111
 Identities = 212/362 (58%), Positives = 259/362 (71%)
 Frame = +3

Query: 69   ENHFISLIHTSKTTQQLKQIHAQLFLHNLSQXXXXXXXXXXXXXXXXXXDYTILIFQHFY 248
            E H ISLIH+S +T+QL+QIHAQ+ LHNL                    DY + IF HF 
Sbjct: 31   ETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSTDYALSIFGHFT 90

Query: 249  SPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRLSVQPDRLTFPFVLKSAASLLAPRLGGT 428
              N  IFN  IR L+ENS FQS I HFV  LRLSV+P+RLT+PFV KS ASL    LG  
Sbjct: 91   PKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRG 150

Query: 429  LHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNILINGCC 608
            LH  IVK G+++D+FV V L DMYV+ G    A ++FDET E+NK  S+LL N+LINGC 
Sbjct: 151  LHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCS 210

Query: 609  KAGDLKKAMELFEAMPERNVGSWNCLINGFFKNKDLEKAQLLFDQMPEKNVVSWTTMIAG 788
            K G L+KA+ELF  MP++NV SW  LI+GF +  DL+KA  LF+QMPEK VVSWT MI G
Sbjct: 211  KIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMING 270

Query: 789  LSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACARIGALESGVQIHDYVSRNGFPLN 968
             SQN + E+AL+MF++ML  GVRAND T+VSALSACA++GALE+GV++H+Y+S N F L 
Sbjct: 271  FSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLK 330

Query: 969  RAIGTSLVDMYAKCGKIECASRLFGEIKEKDLLTWSVMISGWAIHGCSEQALQCFEKMKI 1148
             AIGT+LVDMYAKCG IE AS +FGE KEKDLLTW+ MI G AIHG  EQA+Q F+KM  
Sbjct: 331  GAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMY 390

Query: 1149 AG 1154
            +G
Sbjct: 391  SG 392


>ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein At1g04840-like
            [Cucumis sativus] gi|449505311|ref|XP_004162432.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g04840-like [Cucumis sativus]
          Length = 679

 Score =  406 bits (1044), Expect = e-111
 Identities = 212/363 (58%), Positives = 260/363 (71%)
 Frame = +3

Query: 66   LENHFISLIHTSKTTQQLKQIHAQLFLHNLSQXXXXXXXXXXXXXXXXXXDYTILIFQHF 245
            LE HFI LIH S +T +L+QIH QL+  N+                    DY I IFQ F
Sbjct: 41   LETHFIDLIHASNSTHKLRQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRF 100

Query: 246  YSPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRLSVQPDRLTFPFVLKSAASLLAPRLGG 425
               NS++FNA IR L+ENS+F+SSI  FVL L+  + PDRLTFPFVLKSAA+L    +G 
Sbjct: 101  ELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGR 160

Query: 426  TLHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNILINGC 605
             LH  I+K GL+FDSFV VSLVDMYVK   LG AL++FDE+ E  K  S+L+ N+LI+G 
Sbjct: 161  ALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGY 220

Query: 606  CKAGDLKKAMELFEAMPERNVGSWNCLINGFFKNKDLEKAQLLFDQMPEKNVVSWTTMIA 785
            C+ GDL KA ELF++MP+++ GSWN LINGF K  D+ +A+ LF +MPEKNVVSWTTM+ 
Sbjct: 221  CRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVN 280

Query: 786  GLSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACARIGALESGVQIHDYVSRNGFPL 965
            G SQN D E+AL  F+ ML+EG R ND TIVSALSACA+IGAL++G++IH+Y+S NGF L
Sbjct: 281  GFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKL 340

Query: 966  NRAIGTSLVDMYAKCGKIECASRLFGEIKEKDLLTWSVMISGWAIHGCSEQALQCFEKMK 1145
            N  IGT+LVDMYAKCG IE A ++F E KEK LL WSVMI GWAIHG   +ALQ FE MK
Sbjct: 341  NLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMK 400

Query: 1146 IAG 1154
              G
Sbjct: 401  FTG 403


>ref|XP_006360955.1| PREDICTED: pentatricopeptide repeat-containing protein At1g04840-like
            isoform X1 [Solanum tuberosum]
            gi|565390461|ref|XP_006360956.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At1g04840-like isoform X2 [Solanum tuberosum]
          Length = 666

 Score =  393 bits (1010), Expect = e-107
 Identities = 195/364 (53%), Positives = 260/364 (71%), Gaps = 1/364 (0%)
 Frame = +3

Query: 69   ENHFISLIHTSKTTQQLKQIHAQLFLHNLSQXXXXXXXXXXXXXXXXXXDYTILIFQHFY 248
            E HFISLIH+SK T QL+QIH Q+   NLS                   +Y + IF  F 
Sbjct: 28   EPHFISLIHSSKNTLQLQQIHGQIIRKNLSSNSRIVTQLISSASLHKSINYGLSIFNCFL 87

Query: 249  SPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRLSVQPDRLTFPFVLKSAASLLAPRLGGT 428
              N F+FN  IR L ENS F+ SI +F   +++ V+PD+LT+PFVLKS  +L    +GG 
Sbjct: 88   DKNVFLFNVLIRGLKENSLFEKSILYFRKMVKMGVRPDKLTYPFVLKSVTALGEKGVGGG 147

Query: 429  LHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNILINGCC 608
            +H  ++K+GL++D+FV V LV++YVK   + FALQLFDE+ ERNKV S++L N++INGCC
Sbjct: 148  VHCGVLKVGLEYDTFVRVCLVELYVKVELVDFALQLFDESPERNKVESVILWNVVINGCC 207

Query: 609  KAGDLKKAMELFEAMPERNVGSWNCLINGFFKNKDLEKAQLLFDQMP-EKNVVSWTTMIA 785
            K G +  A+ LFE MPERNVGSWN LI+G  +N +++KA  LFD+MP EKNVVSWT MI 
Sbjct: 208  KIGRMSNALALFEEMPERNVGSWNTLISGLLRNGEVDKAMELFDEMPNEKNVVSWTCMIH 267

Query: 786  GLSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACARIGALESGVQIHDYVSRNGFPL 965
            GL  N  H++AL +F++M++EGV+ N LT+VSALSACA+ GALE+G +IHD +  NG  L
Sbjct: 268  GLMLNGLHQKALDLFFKMVEEGVKPNGLTVVSALSACAKTGALEAGKKIHDNIMNNGLHL 327

Query: 966  NRAIGTSLVDMYAKCGKIECASRLFGEIKEKDLLTWSVMISGWAIHGCSEQALQCFEKMK 1145
            N A+G +L+DMYAKCG IE AS +F  +KEKD+ TWS+MI GWAIHG  ++AL+CFE+M+
Sbjct: 328  NAAVGNALLDMYAKCGYIESASLVFSGLKEKDIRTWSIMIWGWAIHGDVDKALRCFEQMR 387

Query: 1146 IAGI 1157
            + GI
Sbjct: 388  LTGI 391


>ref|XP_002892245.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297338087|gb|EFH68504.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 664

 Score =  369 bits (946), Expect = 2e-99
 Identities = 183/373 (49%), Positives = 252/373 (67%)
 Frame = +3

Query: 36   YYINMNRCTPLENHFISLIHTSKTTQQLKQIHAQLFLHNLSQXXXXXXXXXXXXXXXXXX 215
            Y+    R +P E+HFISLIHT K T  L+ +HA +    +                    
Sbjct: 18   YFPADRRASPDESHFISLIHTCKDTVSLRLVHAHILRRGVLSSRVAAQLVSCSSLLKSP- 76

Query: 216  DYTILIFQHFYSPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRLSVQPDRLTFPFVLKSA 395
            DY++ IF++    N F+FNA IR L+EN++F+ S+ HF+L L L V+PDRLTFPFVLKS 
Sbjct: 77   DYSLSIFRNSEERNPFVFNALIRGLTENARFECSVRHFILMLTLGVKPDRLTFPFVLKSN 136

Query: 396  ASLLAPRLGGTLHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLERNKVSSI 575
            + L    LG  LH   +K  +D DSFV VSLVDMY K G L  A Q+F+ET +R K  SI
Sbjct: 137  SKLGFRWLGRALHAATLKNFVDCDSFVRVSLVDMYAKTGQLNHAFQVFEETPDRIKKESI 196

Query: 576  LLRNILINGCCKAGDLKKAMELFEAMPERNVGSWNCLINGFFKNKDLEKAQLLFDQMPEK 755
            LL N+L+NG C+A D++ A  LF +MPERN GSW+ LI G+  N +L +A+ LF+ MPEK
Sbjct: 197  LLWNVLVNGYCRAKDMQMATTLFRSMPERNSGSWSTLIKGYVDNGELNRAKQLFELMPEK 256

Query: 756  NVVSWTTMIAGLSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACARIGALESGVQIH 935
            NVVSWTT+I G SQ  D+E A+S ++ ML++G++ N+ T+ + LSAC++ GAL SG++IH
Sbjct: 257  NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTVAAVLSACSKSGALGSGIRIH 316

Query: 936  DYVSRNGFPLNRAIGTSLVDMYAKCGKIECASRLFGEIKEKDLLTWSVMISGWAIHGCSE 1115
             Y+  NG  L+RAIGTSL+DMYAKCG+++CA+ +F  +  KD+L+W+ MI GWA+HG   
Sbjct: 317  GYILDNGIKLDRAIGTSLLDMYAKCGEVDCAATVFSNMNHKDILSWTAMIQGWAVHGRFH 376

Query: 1116 QALQCFEKMKIAG 1154
            QA+QCF +M  +G
Sbjct: 377  QAIQCFRQMMYSG 389


>ref|NP_171976.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75192500|sp|Q9MAT2.1|PPR10_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g04840 gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17
            [Arabidopsis thaliana] gi|332189629|gb|AEE27750.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 665

 Score =  363 bits (933), Expect = 7e-98
 Identities = 181/373 (48%), Positives = 252/373 (67%)
 Frame = +3

Query: 36   YYINMNRCTPLENHFISLIHTSKTTQQLKQIHAQLFLHNLSQXXXXXXXXXXXXXXXXXX 215
            Y+    + +P E+HFISLIH  K T  L+ +HAQ+    +                    
Sbjct: 18   YFPADRQASPDESHFISLIHACKDTASLRHVHAQILRRGVLSSRVAAQLVSCSSLLKSP- 76

Query: 216  DYTILIFQHFYSPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRLSVQPDRLTFPFVLKSA 395
            DY++ IF++    N F+ NA IR L+EN++F+SS+ HF+L LRL V+PDRLTFPFVLKS 
Sbjct: 77   DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSN 136

Query: 396  ASLLAPRLGGTLHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLERNKVSSI 575
            + L    LG  LH   +K  +D DSFV +SLVDMY K G L  A Q+F+E+ +R K  SI
Sbjct: 137  SKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESI 196

Query: 576  LLRNILINGCCKAGDLKKAMELFEAMPERNVGSWNCLINGFFKNKDLEKAQLLFDQMPEK 755
            L+ N+LING C+A D+  A  LF +MPERN GSW+ LI G+  + +L +A+ LF+ MPEK
Sbjct: 197  LIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEK 256

Query: 756  NVVSWTTMIAGLSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACARIGALESGVQIH 935
            NVVSWTT+I G SQ  D+E A+S ++ ML++G++ N+ TI + LSAC++ GAL SG++IH
Sbjct: 257  NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIH 316

Query: 936  DYVSRNGFPLNRAIGTSLVDMYAKCGKIECASRLFGEIKEKDLLTWSVMISGWAIHGCSE 1115
             Y+  NG  L+RAIGT+LVDMYAKCG+++CA+ +F  +  KD+L+W+ MI GWA+HG   
Sbjct: 317  GYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFH 376

Query: 1116 QALQCFEKMKIAG 1154
            QA+QCF +M  +G
Sbjct: 377  QAIQCFRQMMYSG 389


>ref|XP_006306938.1| hypothetical protein CARUB_v10008505mg, partial [Capsella rubella]
            gi|482575649|gb|EOA39836.1| hypothetical protein
            CARUB_v10008505mg, partial [Capsella rubella]
          Length = 672

 Score =  362 bits (930), Expect = 2e-97
 Identities = 179/367 (48%), Positives = 248/367 (67%)
 Frame = +3

Query: 54   RCTPLENHFISLIHTSKTTQQLKQIHAQLFLHNLSQXXXXXXXXXXXXXXXXXXDYTILI 233
            R +P E+HFISLIH  K T  L+++HAQ+    +                    DY + I
Sbjct: 31   RASPDESHFISLIHACKDTVSLRRVHAQILRRGVLSSRVAAQLVSCSGLLQSP-DYCLSI 89

Query: 234  FQHFYSPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRLSVQPDRLTFPFVLKSAASLLAP 413
            F++F   N F+FN  IR L+EN++  SS+ HF+L LRL V+PDRLTFPFVLKS + L   
Sbjct: 90   FRNFEEKNLFVFNVLIRGLTENARSASSVRHFILMLRLGVRPDRLTFPFVLKSNSKLGFR 149

Query: 414  RLGGTLHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNIL 593
             LG  LH   +K  +D DSFV VSLVDMY K   L +A Q+FDE+ +R K  S LL N+L
Sbjct: 150  WLGRALHAATLKNFVDCDSFVRVSLVDMYAKTRQLNYAFQVFDESPDRIKKESTLLSNVL 209

Query: 594  INGCCKAGDLKKAMELFEAMPERNVGSWNCLINGFFKNKDLEKAQLLFDQMPEKNVVSWT 773
            I G C+A D++ A +LF +MPERN GSW+ LI G+     L +A+ LF+ MPEK+VV+WT
Sbjct: 210  IKGYCRAKDMQMATKLFRSMPERNSGSWSTLIKGYADCSQLNRAKQLFELMPEKHVVTWT 269

Query: 774  TMIAGLSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACARIGALESGVQIHDYVSRN 953
            T+I G SQN  +E A+S ++ ML++G++ N+ T+ +ALSAC++ GAL SG++IH Y+  N
Sbjct: 270  TLINGFSQNGYYETAISTYFEMLEKGLKPNEYTVAAALSACSKSGALGSGIRIHAYILDN 329

Query: 954  GFPLNRAIGTSLVDMYAKCGKIECASRLFGEIKEKDLLTWSVMISGWAIHGCSEQALQCF 1133
            G  L+RAIGT+L+DMYAKCG+++CA  +F  +  KD+L+W+ MI GWA+HGC  QA+QCF
Sbjct: 330  GIRLDRAIGTALIDMYAKCGEVDCAGTVFSNMNHKDILSWTAMIQGWAVHGCFHQAIQCF 389

Query: 1134 EKMKIAG 1154
             +M  +G
Sbjct: 390  RQMMYSG 396


>ref|XP_006418090.1| hypothetical protein EUTSA_v10007007mg [Eutrema salsugineum]
            gi|557095861|gb|ESQ36443.1| hypothetical protein
            EUTSA_v10007007mg [Eutrema salsugineum]
          Length = 665

 Score =  361 bits (927), Expect = 3e-97
 Identities = 177/368 (48%), Positives = 253/368 (68%)
 Frame = +3

Query: 51   NRCTPLENHFISLIHTSKTTQQLKQIHAQLFLHNLSQXXXXXXXXXXXXXXXXXXDYTIL 230
            +R +P E+H ISLIH  K T  L+++HA +    +                    DY++ 
Sbjct: 23   HRASPDESHIISLIHACKDTVCLRRVHAYILRRGVLSSRVAAQLVSSSSLLKSP-DYSLS 81

Query: 231  IFQHFYSPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRLSVQPDRLTFPFVLKSAASLLA 410
            IF++    N F+FNA IR L+E+++F+ S+ HF+L LRL V+PDRLTFPFVLKS + L  
Sbjct: 82   IFRYLKEKNLFVFNALIRGLAESARFKCSVRHFILMLRLGVRPDRLTFPFVLKSNSKLGF 141

Query: 411  PRLGGTLHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLERNKVSSILLRNI 590
              LG  LH   +K  +D DSFV VSLVDMY K G L +A Q+FDE+ +  K+  ILL N+
Sbjct: 142  RWLGRALHAAALKDSVDCDSFVRVSLVDMYAKTGGLKYAFQVFDESPDWIKMERILLWNV 201

Query: 591  LINGCCKAGDLKKAMELFEAMPERNVGSWNCLINGFFKNKDLEKAQLLFDQMPEKNVVSW 770
            LING C+A D++ A  LF +MPERN GSW+ LI G+  N DL +A+ LF+ MPEK+VVSW
Sbjct: 202  LINGYCRAKDMQMATTLFGSMPERNSGSWSTLIKGYVDNGDLNRARQLFEVMPEKSVVSW 261

Query: 771  TTMIAGLSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACARIGALESGVQIHDYVSR 950
            TT+I G SQN D+E A+S ++ ML+EG++ N+ T+ + LSAC++ GAL SG++IH Y+  
Sbjct: 262  TTLINGFSQNGDYESAISTYFEMLEEGMKPNEYTVAAVLSACSKSGALGSGIRIHGYILD 321

Query: 951  NGFPLNRAIGTSLVDMYAKCGKIECASRLFGEIKEKDLLTWSVMISGWAIHGCSEQALQC 1130
            NG  L+RAIGT+L+DMYAKCG+++CA+ +F  ++ KD+L+W+ MI GWA+HG  ++++ C
Sbjct: 322  NGINLDRAIGTALIDMYAKCGEVDCAATVFSNMRHKDILSWTAMIQGWALHGRFQESILC 381

Query: 1131 FEKMKIAG 1154
            F +M  +G
Sbjct: 382  FRQMLFSG 389


>ref|XP_004247960.1| PREDICTED: pentatricopeptide repeat-containing protein At1g04840-like
            [Solanum lycopersicum]
          Length = 547

 Score =  334 bits (856), Expect = 6e-89
 Identities = 161/272 (59%), Positives = 214/272 (78%), Gaps = 1/272 (0%)
 Frame = +3

Query: 345  LSVQPDRLTFPFVLKSAASLLAPRLGGTLHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGF 524
            + V+PD+LT+PFVLKS  +L   R+GG +H  I+K+GL++D+FV V LV+MYVK   + F
Sbjct: 1    MGVRPDKLTYPFVLKSVTALGDKRVGGVVHCGILKMGLEYDTFVRVCLVEMYVKAELVDF 60

Query: 525  ALQLFDETLERNKVSSILLRNILINGCCKAGDLKKAMELFEAMPERNVGSWNCLINGFFK 704
            ALQLFDE+ ERNKV S++L N++INGCCK G + KA+ LFE MPERNVGSWN LI+G  +
Sbjct: 61   ALQLFDESSERNKVESVILWNVVINGCCKIGRVSKALALFEEMPERNVGSWNTLISGLLR 120

Query: 705  NKDLEKAQLLFDQMP-EKNVVSWTTMIAGLSQNEDHEQALSMFYRMLKEGVRANDLTIVS 881
            N +++KA  LFD+M  EKNVVSWT MI GL  NE H++AL +F++M++EGV+ N LT+VS
Sbjct: 121  NGEVDKAMELFDEMTNEKNVVSWTCMIHGLMLNELHQKALDLFFKMVEEGVKPNGLTVVS 180

Query: 882  ALSACARIGALESGVQIHDYVSRNGFPLNRAIGTSLVDMYAKCGKIECASRLFGEIKEKD 1061
            ALSACA+ GALE+G +IHD +  NG  LN A+G +L+DMYAKCG IE AS +F  +KEKD
Sbjct: 181  ALSACAKTGALEAGKKIHDNIVNNGLHLNAAVGNALLDMYAKCGYIESASLVFSGLKEKD 240

Query: 1062 LLTWSVMISGWAIHGCSEQALQCFEKMKIAGI 1157
            + TWS+MI GWAIHG  ++AL+CFE+M++ GI
Sbjct: 241  IRTWSIMIWGWAIHGHVDKALRCFEQMRLTGI 272


>ref|XP_004295870.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
            [Fragaria vesca subsp. vesca]
          Length = 729

 Score =  251 bits (640), Expect = 7e-64
 Identities = 130/308 (42%), Positives = 203/308 (65%), Gaps = 3/308 (0%)
 Frame = +3

Query: 228  LIFQHFY-SPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRL--SVQPDRLTFPFVLKSAA 398
            LIF+HF  +PN F +NA +++ ++N+ +  +I +F  +L    +  PD  TF  VLK+ A
Sbjct: 146  LIFRHFLETPNIFAYNALLKAFAQNNDWHHTILYFNSQLLSPNAPTPDEYTFTSVLKACA 205

Query: 399  SLLAPRLGGTLHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLERNKVSSIL 578
             LL    GG +H  + K G + + FV  SL DMY KFG +G A +LFDE   R+ VS   
Sbjct: 206  GLLRVTEGGKVHCLVTKFGCEENLFVRNSLTDMYFKFGKVGVAQKLFDEMRVRDVVSW-- 263

Query: 579  LRNILINGCCKAGDLKKAMELFEAMPERNVGSWNCLINGFFKNKDLEKAQLLFDQMPEKN 758
              N L+ G C +G++ +A  +F+ M E++  SW+ +I+ + K  +LE+AQ LFD +P++N
Sbjct: 264  --NTLVAGYCVSGEVGEARRVFDGMVEKSSFSWSTMISAYAKLGELEEAQRLFDAVPQRN 321

Query: 759  VVSWTTMIAGLSQNEDHEQALSMFYRMLKEGVRANDLTIVSALSACARIGALESGVQIHD 938
            VVSW  MIAG +QNE +++A+ +F  M + G+  ND+T+VS LSACA +GAL+ G  I  
Sbjct: 322  VVSWNAMIAGYAQNEKYDEAVGLFREMQECGLAPNDVTLVSVLSACAHLGALDLGKWIDR 381

Query: 939  YVSRNGFPLNRAIGTSLVDMYAKCGKIECASRLFGEIKEKDLLTWSVMISGWAIHGCSEQ 1118
            ++ R+G  L   +G +L DMYAKCG I  A R+F  ++E+D+++WS++I+G A++G ++Q
Sbjct: 382  FIKRSGMDLGLFLGNALADMYAKCGCITEARRVFNNMQERDVISWSIIITGLAMNGHADQ 441

Query: 1119 ALQCFEKM 1142
            A +CF+KM
Sbjct: 442  AFECFDKM 449


>ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
            At3g29230-like, partial [Cucumis sativus]
          Length = 610

 Score =  249 bits (635), Expect = 2e-63
 Identities = 142/391 (36%), Positives = 211/391 (53%), Gaps = 28/391 (7%)
 Frame = +3

Query: 66   LENHFISLIHTSKTTQQLKQIHAQLFLHNLSQXXXXXXXXXXXXXXXXXXDYTILIFQHF 245
            LE HFISL+ + KT   L+++ AQ+  H                       +   +F HF
Sbjct: 24   LEEHFISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHF 83

Query: 246  YSPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRLSVQPDRLTFPFVLKSAASLLAPRLGG 425
              P   ++NA  R    N+ ++  +F F     + V+P+  TFP VLKS A + A   G 
Sbjct: 84   PDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGE 143

Query: 426  TLHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLERNKVS------------ 569
             +H +++K GL+ + FV  +L+D+Y    ++G A +LF   LERN V+            
Sbjct: 144  EIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCN 203

Query: 570  ---------------SILLRNILINGCCKAGDLKKAMELFEAMPERNVGSWNCLINGFFK 704
                            ++L NI+++G  + GD+K A +LF+ MP R+  SWN ++NG+  
Sbjct: 204  RVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYAN 263

Query: 705  NKDLEKAQLLFDQMPEKNVVSWTTMIAGLSQNEDHEQALSMFYRMLKEG-VRANDLTIVS 881
            N D+E  + LF++MPE+NV SW  +I G + N    + L  F RML +G V  ND T+V+
Sbjct: 264  NGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVT 323

Query: 882  ALSACARIGALESGVQIHDYVSRNGFPLNRAIGTSLVDMYAKCGKIECASRLFGEIKEKD 1061
             LSACAR+GAL+ G  +H Y +  GF  +  +G +L+DMY+KCG IE A  +F  +  KD
Sbjct: 324  VLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKD 383

Query: 1062 LLTWSVMISGWAIHGCSEQALQCFEKMKIAG 1154
            L+TW+ MI G A HGC   AL  F +MKI G
Sbjct: 384  LITWNSMICGLATHGCGADALTLFHQMKING 414


>ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Cucumis sativus]
          Length = 652

 Score =  249 bits (635), Expect = 2e-63
 Identities = 142/391 (36%), Positives = 211/391 (53%), Gaps = 28/391 (7%)
 Frame = +3

Query: 66   LENHFISLIHTSKTTQQLKQIHAQLFLHNLSQXXXXXXXXXXXXXXXXXXDYTILIFQHF 245
            LE HFISL+ + KT   L+++ AQ+  H                       +   +F HF
Sbjct: 66   LEEHFISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHF 125

Query: 246  YSPNSFIFNAFIRSLSENSQFQSSIFHFVLRLRLSVQPDRLTFPFVLKSAASLLAPRLGG 425
              P   ++NA  R    N+ ++  +F F     + V+P+  TFP VLKS A + A   G 
Sbjct: 126  PDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGE 185

Query: 426  TLHGQIVKLGLDFDSFVLVSLVDMYVKFGSLGFALQLFDETLERNKVS------------ 569
             +H +++K GL+ + FV  +L+D+Y    ++G A +LF   LERN V+            
Sbjct: 186  EIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCN 245

Query: 570  ---------------SILLRNILINGCCKAGDLKKAMELFEAMPERNVGSWNCLINGFFK 704
                            ++L NI+++G  + GD+K A +LF+ MP R+  SWN ++NG+  
Sbjct: 246  RVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYAN 305

Query: 705  NKDLEKAQLLFDQMPEKNVVSWTTMIAGLSQNEDHEQALSMFYRMLKEG-VRANDLTIVS 881
            N D+E  + LF++MPE+NV SW  +I G + N    + L  F RML +G V  ND T+V+
Sbjct: 306  NGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVT 365

Query: 882  ALSACARIGALESGVQIHDYVSRNGFPLNRAIGTSLVDMYAKCGKIECASRLFGEIKEKD 1061
             LSACAR+GAL+ G  +H Y +  GF  +  +G +L+DMY+KCG IE A  +F  +  KD
Sbjct: 366  VLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKD 425

Query: 1062 LLTWSVMISGWAIHGCSEQALQCFEKMKIAG 1154
            L+TW+ MI G A HGC   AL  F +MKI G
Sbjct: 426  LITWNSMICGLATHGCGADALTLFHQMKING 456