BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00028493
         (953 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...    89   2e-30
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    97   1e-28
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ...    93   3e-28
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    82   3e-27
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    84   5e-26
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]            86   5e-26
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 83   2e-25
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    88   9e-25
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                88   1e-24
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...    86   2e-24
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    90   2e-24
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    85   2e-24
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    86   3e-24
emb|CAB72467.1| putative protein [Arabidopsis thaliana]                86   3e-24
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...    83   5e-24
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali...    84   3e-23
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        80   4e-23
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   4e-22
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    75   2e-20
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            75   2e-20

>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score = 88.6 bits (218), Expect(2) = 2e-30
 Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
 Frame = -1

Query: 638  KRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVWDINS 459
            K +E     FLW G         ++W  I   + +GGLG  +L   NKA +   +W++ S
Sbjct: 659  KDIEKRLRCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNKALMISHIWNLVS 718

Query: 458  NKSSIWVDWIK-NMIKW*HFWTMPITNNASWMWRKILQLRETIQDLIVHRIGNGADTFI* 282
            + S+ W DW+K  ++K   FW  P+ +  SW WRK+L++RE      V+ IG+G  T + 
Sbjct: 719  SSSNFWTDWVKVYLLKGNSFWNAPLPSICSWNWRKLLKIRELCCSFFVNIIGDGRATSLW 778

Query: 281  QDPW 270
             D W
Sbjct: 779  FDNW 782



 Score = 71.6 bits (174), Expect(2) = 2e-30
 Identities = 39/106 (36%), Positives = 64/106 (60%)
 Frame = -2

Query: 946 LKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHTKI 767
           LK N+ ++ I+ AG+  N    +         +  V+YLG+P      ++   S    +I
Sbjct: 556 LKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRI 615

Query: 766 TSKIKTWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVLKGL 629
            ++IK+W+ + L  AGR++LI+ V+SS+QVYW+S L+LPKKVLK +
Sbjct: 616 ETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLILPKKVLKDI 661


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 96.7 bits (239), Expect(2) = 1e-28
 Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 2/154 (1%)
 Frame = -1

Query: 638 KRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVWDINS 459
           K + S  + FLW+GP +  +   +SW  I + +++GGLG   L   N   + + +W + S
Sbjct: 242 KEINSICSAFLWSGPELHRRKAKVSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTS 301

Query: 458 NKSSIWVDWIK-NMIKW*HFWTM-PITNNASWMWRKILQLRETIQDLIVHRIGNGADTFI 285
           N  S+WV W K N++K   FW++ P ++  SWMW+K+L+ RET +      + NGA T  
Sbjct: 302 NDDSLWVKWSKMNLLKQESFWSLTPNSSLGSWMWKKMLKYRETAKPFSRVEVNNGARTSF 361

Query: 284 *QDPWTAREGGWILNNNQQADSCDSRLHREAKIS 183
             D W+    G +++   Q    D  + R   ++
Sbjct: 362 WFDNWSGM--GHLMDVTGQRGQIDLGISRNKTVA 393



 Score = 57.8 bits (138), Expect(2) = 1e-28
 Identities = 34/105 (32%), Positives = 53/105 (50%)
 Frame = -2

Query: 949 GLKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHTK 770
           GL++N+ K  +Y AG+ ++++  +          L V+YLGLP           S    +
Sbjct: 138 GLQINMEKTTLYTAGVSDHNRYMMISRYPFGLGQLPVRYLGLPLVTKRLTKEDLSPLFEQ 197

Query: 769 ITSKIKTWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVLK 635
           I ++I TW +R+L  AGR+ LI  V+ S   +W S   LP   LK
Sbjct: 198 IRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAFRLPSACLK 242


>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1115

 Score = 92.8 bits (229), Expect(2) = 3e-28
 Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 2/154 (1%)
 Frame = -1

Query: 638  KRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVWDINS 459
            K + S  + FLW+GP ++ +   +SW  I +  K GGLG   L   N   + + +W + S
Sbjct: 754  KEINSICSAFLWSGPELNRRKAKVSWDDICKP-KQGGLGLRSLTEANVVSVLKLIWRVTS 812

Query: 458  NKSSIWVDWIK-NMIKW*HFWTM-PITNNASWMWRKILQLRETIQDLIVHRIGNGADTFI 285
            N  S+WV W K N++K   FW++ P ++  SWMW+K+L+ RET +      + NGA T  
Sbjct: 813  NDDSLWVKWSKMNLLKQESFWSLKPNSSLGSWMWKKMLKYRETAKPFSRVEVNNGARTSF 872

Query: 284  *QDPWTAREGGWILNNNQQADSCDSRLHREAKIS 183
              D W+    G +++   Q    D  + R   ++
Sbjct: 873  WFDNWSGM--GHLMDVTGQRGQIDLGISRNKTVA 904



 Score = 60.1 bits (144), Expect(2) = 3e-28
 Identities = 36/105 (34%), Positives = 54/105 (51%)
 Frame = -2

Query: 949 GLKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHTK 770
           GLK+N+ K  +Y AG+ ++++  +        A L V+YLGLP           S    +
Sbjct: 650 GLKINMEKTTLYTAGVSDHNRHMMISRYPFGLAQLPVRYLGLPLVTKRLTKEDLSPLFEQ 709

Query: 769 ITSKIKTWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVLK 635
           I ++I TW +R+L  AGR+ LI  V+ S   +W S   LP   LK
Sbjct: 710 IRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAFRLPSACLK 754


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 82.0 bits (201), Expect(2) = 3e-27
 Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 2/125 (1%)
 Frame = -1

Query: 638  KRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVWDINS 459
            + +E   + FLW+GP ++ K   I+W  + + +++GGLG   L+  N+  + + +W I S
Sbjct: 984  QEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILS 1043

Query: 458  NKSSIWVDWI-KNMIKW*HFWTM-PITNNASWMWRKILQLRETIQDLIVHRIGNGADTFI 285
             + S+WV W+ K++I+   FW++   T   SW+WRKIL+ R+  +      + +G  T  
Sbjct: 1044 ARDSLWVKWVNKHLIRKETFWSVKENTGLGSWLWRKILKQRDKARLFHRMEVRSGTFTSF 1103

Query: 284  *QDPW 270
              D W
Sbjct: 1104 WHDHW 1108



 Score = 67.4 bits (163), Expect(2) = 3e-27
 Identities = 43/104 (41%), Positives = 57/104 (54%)
 Frame = -2

Query: 946  LKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHTKI 767
            LK++L K+ I+ AGI  N K  I         +L VKYLGLP        S       KI
Sbjct: 881  LKISLEKSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKI 940

Query: 766  TSKIKTWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVLK 635
             ++I +W  RFL  AGR++LIK V+SS+  +W SV  LPK  L+
Sbjct: 941  RARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQ 984


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 84.3 bits (207), Expect(2) = 5e-26
 Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
 Frame = -1

Query: 638  KRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVWDINS 459
            + +E   + FLW+GP ++ K   I+W  I + +K+GGLG   L   NK    + +W + S
Sbjct: 1134 REIEKLCSAFLWSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLS 1193

Query: 458  NKSSIWVDWIKN-MIKW*HFWTMPITNN-ASWMWRKILQLRETIQDLIVHRIGNGADTFI 285
             + S+WV WI   +I+   FW+    ++  SWMW+K+L+ RE  + +    + NG+ T  
Sbjct: 1194 TQPSLWVTWIWTFIIRKGTFWSANERSSLGSWMWKKLLKYRELAKSMHKVEVRNGSSTSF 1253

Query: 284  *QDPWT 267
              D W+
Sbjct: 1254 WYDHWS 1259



 Score = 61.2 bits (147), Expect(2) = 5e-26
 Identities = 37/110 (33%), Positives = 57/110 (51%)
 Frame = -2

Query: 949  GLKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHTK 770
            GL+++L K+ IY AG+  +D+V+   S       L V+YLGLP        +  S     
Sbjct: 1030 GLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEA 1089

Query: 769  ITSKIKTWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVLKGLRVL 620
            + +KI +W AR L  AGR+ L+  VI S+  +W S   LP   ++ +  L
Sbjct: 1090 VKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKL 1139


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score = 85.5 bits (210), Expect(2) = 5e-26
 Identities = 40/126 (31%), Positives = 72/126 (57%), Gaps = 2/126 (1%)
 Frame = -1

Query: 638 KRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVWDINS 459
           K ++S  + FLW+GP ++ K   ++W  +   + +GGLG   L+  NK  + + +W + S
Sbjct: 93  KEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEANKVSLLKLIWRMLS 152

Query: 458 NKSSIWVDWIK-NMIKW*HFWTMP-ITNNASWMWRKILQLRETIQDLIVHRIGNGADTFI 285
           + +S+WV W++  +++   FW++   T   SWMW+KIL+ R      + H I NG++T  
Sbjct: 153 S-TSLWVQWLRLYLLRKGSFWSISGNTTLGSWMWKKILKHRALASGFVKHDIHNGSNTSF 211

Query: 284 *QDPWT 267
             D W+
Sbjct: 212 WFDNWS 217



 Score = 60.1 bits (144), Expect(2) = 5e-26
 Identities = 36/92 (39%), Positives = 47/92 (51%)
 Frame = -2

Query: 910 AGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHTKITSKIKTWKARFL 731
           AG+++NDK  I HS      +L V+YLGLP        S       KI  +I  W AR L
Sbjct: 2   AGVKDNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHL 61

Query: 730 LLAGRMELIK*VISSMQVYWSSVLMLPKKVLK 635
             AGR++LI  VI S+  +W S   LP   +K
Sbjct: 62  SFAGRLQLISSVIHSLTNFWMSAFRLPSACIK 93


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 83.2 bits (204), Expect(2) = 2e-25
 Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
 Frame = -1

Query: 638 KRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVWDINS 459
           K +E   + FLW+GP ++ K   I+W  + + +++GGLG   L   NK    + +W + S
Sbjct: 410 KEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVS 469

Query: 458 NKSSIWVDWI-KNMIKW*HFWTMPITNN-ASWMWRKILQLRETIQDLIVHRIGNGADTFI 285
            +SS+WV+W+   +I+   FW+    ++  SWMW+K+L+ R+  + +    I +G+ T  
Sbjct: 470 RQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWKKLLKYRDVAKSMCKVEIKSGSSTSF 529

Query: 284 *QDPWT 267
             D W+
Sbjct: 530 WYDNWS 535



 Score = 60.5 bits (145), Expect(2) = 2e-25
 Identities = 38/110 (34%), Positives = 55/110 (50%)
 Frame = -2

Query: 949 GLKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHTK 770
           GL ++L K+ +Y AG+   ++  I  +       L V+YLGLP        +  S    K
Sbjct: 306 GLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDK 365

Query: 769 ITSKIKTWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVLKGLRVL 620
           + SKI +W AR L  AGR+ LI  VI S+  +W S   LP   +K +  L
Sbjct: 366 VRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKL 415


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score = 87.8 bits (216), Expect(2) = 9e-25
 Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
 Frame = -1

Query: 650  QESAKRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVW 471
            +E    +   S+  LW+GP ++ K   +SW  I + +K+GGLG   L   NK    + +W
Sbjct: 554  RECINEINRISSALLWSGPELNPKKAKVSWDEICKPKKEGGLGLQSLREANKVSSLKLIW 613

Query: 470  DINSNKSSIWVDWIK-NMIKW*HFWTMPITNN-ASWMWRKILQLRETIQDLIVHRIGNGA 297
             + S + S+WV W + N++K   FW++   +   SW+WR++L+ RE  +      + NG 
Sbjct: 614  RLLSCQDSLWVKWTRMNLLKKESFWSIGTHSTLGSWIWRRLLKHREVAKSFCKIEVNNGV 673

Query: 296  DTFI*QDPWTAREGGWILNNNQQADSCDSRLHREAKIS 183
            +T    D W+  E G ++N      + D  + R   ++
Sbjct: 674  NTSFWFDNWS--EKGPLINLTGARGAIDMGISRHMTLA 709



 Score = 53.5 bits (127), Expect(2) = 9e-25
 Identities = 31/105 (29%), Positives = 54/105 (51%)
 Frame = -2

Query: 952 IGLKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHT 773
           +GLK+ + K  +Y AG+ ++ +  ++         L V+YLGLP        S  S    
Sbjct: 453 LGLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLID 512

Query: 772 KITSKIKTWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVL 638
           +I  +I  W +R+L  AGR+ LI  V+ S+  +W +   LP++ +
Sbjct: 513 QIRRRIGMWTSRYLSFAGRLSLINSVLWSITNFWMNAFRLPRECI 557


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 88.2 bits (217), Expect(2) = 1e-24
 Identities = 45/158 (28%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
 Frame = -1

Query: 650 QESAKRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVW 471
           ++  + ++   + FLW+G  MS+    ISW  + + + +GGLG   L+  N     + VW
Sbjct: 480 RQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVW 539

Query: 470 DINSNKSSIWVDWI-KNMIKW*HFWTM-PITNNASWMWRKILQLRETIQDLIVHRIGNGA 297
            I SN +S+W  W+ + +I+    W++   T+  SW+WRKIL++R+  +      +GNG 
Sbjct: 540 RIISNSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGNGE 599

Query: 296 DTFI*QDPWTAREGGWILNNNQQADSCDSRLHREAKIS 183
                 D W+A   G +++      + D  + REA ++
Sbjct: 600 SASFWYDHWSAH--GRLIDTVGDKGTIDLGIPREASVA 635



 Score = 52.4 bits (124), Expect(2) = 1e-24
 Identities = 34/105 (32%), Positives = 52/105 (49%)
 Frame = -2

Query: 949 GLKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHTK 770
           GL+++L K+ +Y AG+    K  I          L V+YLGLP        +  S    +
Sbjct: 380 GLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQ 439

Query: 769 ITSKIKTWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVLK 635
           I  +I TW  RF   AGR  LIK V+ S+  +W +   LP++ ++
Sbjct: 440 IKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIR 484


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score = 85.9 bits (211), Expect(2) = 2e-24
 Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 2/163 (1%)
 Frame = -1

Query: 638  KRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVWDINS 459
            K++ES  +RFLW+       +  ++W ++   + +GG+G     + N+    R +W + S
Sbjct: 727  KKIESLCSRFLWSSRIDKKGIAKVAWSQVCLPKAEGGIGLRRFAVSNRTLYLRMIWLLFS 786

Query: 458  NKSSIWVDWIK--NMIKW*HFWTMPITNNASWMWRKILQLRETIQDLIVHRIGNGADTFI 285
            N  S+WV W K  ++ K   FW  P   + SW W+ +L+LR   +  I   +GNG D   
Sbjct: 787  NSGSLWVAWHKQHSLGKSTSFWNQPEKPHDSWNWKCLLRLRVVAERFIRCNVGNGRDASF 846

Query: 284  *QDPWTAREGGWILNNNQQADSCDSRLHREAKISSLSNDTCLS 156
              D WT    G ++         D R+H  AKIS    D C S
Sbjct: 847  WFDNWT--PFGPLIKFLGNEGPRDLRVHLNAKIS----DVCTS 883



 Score = 54.3 bits (129), Expect(2) = 2e-24
 Identities = 36/110 (32%), Positives = 57/110 (51%)
 Frame = -2

Query: 949 GLKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHTK 770
           GL MN +K  +Y AG+  ++   +  S      SL V+YLGLP       ++  +    K
Sbjct: 624 GLLMNTNKTQLYHAGLSQSESDSMA-SYGFKLGSLPVRYLGLPLMSRKLTIAEYAPLIEK 682

Query: 769 ITSKIKTWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVLKGLRVL 620
           IT++  +W  R L  AGR++L+  VIS +  +W S  +LP   +K +  L
Sbjct: 683 ITARFNSWVVRLLSFAGRVQLLASVISGIVNFWISSFILPLGCIKKIESL 732


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 89.7 bits (221), Expect(2) = 2e-24
 Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 1/131 (0%)
 Frame = -1

Query: 650 QESAKRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVW 471
           +E  + ++   + FLW+GP +S     I+W+ + R +++GGLG   ++  N     + +W
Sbjct: 351 RECVREIDKLCSAFLWSGPELSTNKAKIAWETVCRPKREGGLGLQSIKEANDVCCLKLIW 410

Query: 470 DINSNKSSIWVDWIKN-MIKW*HFWTMPITNNASWMWRKILQLRETIQDLIVHRIGNGAD 294
            I S   S+WV WI+  ++K   FW+    +  SWMW+K+L+ R+T +      I NG  
Sbjct: 411 RIVSQGDSLWVQWIRTYLLKRNTFWSFRSASQGSWMWKKLLKYRDTAKAFSKVDIRNGET 470

Query: 293 TFI*QDPWTAR 261
                D W+++
Sbjct: 471 ASFWYDDWSSK 481



 Score = 50.4 bits (119), Expect(2) = 2e-24
 Identities = 34/105 (32%), Positives = 50/105 (47%)
 Frame = -2

Query: 949 GLKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHTK 770
           GLK+++ K  IY AGI  +               L V+YL LP           S    +
Sbjct: 251 GLKISMAKTTIYFAGISKSVCKEFEDQFHFAVGRLPVRYLCLPLVTKRFTSQDYSPLLEQ 310

Query: 769 ITSKIKTWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVLK 635
           I  +I TW ARFL  AGR+ L+  V+ S+  +W S   LP++ ++
Sbjct: 311 IKRRIGTWTARFLSYAGRLNLVSSVLWSICNFWLSAFRLPRECVR 355


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 85.1 bits (209), Expect(2) = 2e-24
 Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 2/130 (1%)
 Frame = -1

Query: 650 QESAKRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVW 471
           +E  + ++   + +LW+G  ++     I+W  + + + +GGLG   L+  N     + +W
Sbjct: 215 RECIREIDKMCSAYLWSGGDLNTSKAKIAWTDVCKPKDEGGLGLRSLKEANDVSCLKLIW 274

Query: 470 DINSNKSSIWVDWI-KNMIKW*HFWTM-PITNNASWMWRKILQLRETIQDLIVHRIGNGA 297
            I S+  S+WV WI   ++K   FW +   T+  SWMW+K+L+ R+    L    + NGA
Sbjct: 275 RIISHADSLWVKWIHATLLKQVSFWAVRENTSLGSWMWKKVLKFRDAAIQLCKAEVNNGA 334

Query: 296 DTFI*QDPWT 267
            TF   D W+
Sbjct: 335 HTFFWYDNWS 344



 Score = 55.1 bits (131), Expect(2) = 2e-24
 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
 Frame = -2

Query: 949 GLKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHTK 770
           GL++++ K+ +Y AG+ +     +         +L V+YLGLP          SST +  
Sbjct: 115 GLRISMEKSTVYFAGLSHTSPQEVMAHFPFAVGTLPVRYLGLPL----VTKQLSSTDYLP 170

Query: 769 ----ITSKIKTWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVLK 635
               I  KI +W ARFL  AGR+ LI  V+ S+  +W     LP++ ++
Sbjct: 171 LIEHIKKKIGSWSARFLSYAGRLNLISSVLWSICNFWMGAFRLPRECIR 219


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 85.5 bits (210), Expect(2) = 3e-24
 Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
 Frame = -1

Query: 638  KRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVWDINS 459
            + +E   + FLW+G  M++    ISW  + + + +GGLG   L+  N     + VW I S
Sbjct: 837  RELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVS 896

Query: 458  NKSSIWVDWI-KNMIKW*HFWTMPIT-NNASWMWRKILQLRETIQDLIVHRIGNGADTFI 285
            + +S+WV W+ +++++   FW +  T +  SW+W+K+L+ RE  + L    +GNG  T  
Sbjct: 897  HSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGNGKQTSF 956

Query: 284  *QDPWT 267
              D W+
Sbjct: 957  WYDNWS 962



 Score = 53.9 bits (128), Expect(2) = 3e-24
 Identities = 31/107 (28%), Positives = 54/107 (50%)
 Frame = -2

Query: 949  GLKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHTK 770
            GL+++L K+ +Y AG+    +  +          L V+YLGLP        +       +
Sbjct: 733  GLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQ 792

Query: 769  ITSKIKTWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVLKGL 629
            +  +I +W +RFL  AGR+ LI  V+ S+  +W +   LP+K ++ L
Sbjct: 793  VRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIREL 839


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 85.5 bits (210), Expect(2) = 3e-24
 Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
 Frame = -1

Query: 638 KRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVWDINS 459
           + +E   + FLW+G ++++K   ISW ++ + + +GGLG   L+  N     + VW I S
Sbjct: 390 QEIEKLCSSFLWSGTNLNSKKAKISWNQVCKPKSEGGLGLRSLKEANDVCCLKLVWRIIS 449

Query: 458 NKSSIWVDWIK-NMIKW*HFWTMPITNN-ASWMWRKILQLRETIQDLIVHRIGNGADTFI 285
           +  S+WV W++ N++K   FW +    N  SW+W+KIL+ R   +      +GNG  T  
Sbjct: 450 HGDSLWVKWVEHNLLKREIFWIVKENANLGSWIWKKILKYRGVAKRFCKAEVGNGESTSF 509

Query: 284 *QDPWT 267
             D W+
Sbjct: 510 WFDDWS 515



 Score = 53.9 bits (128), Expect(2) = 3e-24
 Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
 Frame = -2

Query: 949 GLKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHT- 773
           GLK+++ K+ I+ AG+ +  + +++         L ++YLGLP          SS  +  
Sbjct: 286 GLKISMEKSTIFSAGLSSTSRAQLHTHFPFEVGELPIRYLGLPL----VTKRLSSVDYAP 341

Query: 772 ---KITSKIKTWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVLKGLRVL 620
              +I  +I +W +RFL  AGR  LI  +I S   +W S   LP+  ++ +  L
Sbjct: 342 LIEQIRKRIGSWSSRFLSFAGRFNLISSIIWSSCNFWLSAFQLPRACIQEIEKL 395


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score = 82.8 bits (203), Expect(2) = 5e-24
 Identities = 39/126 (30%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
 Frame = -1

Query: 638  KRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVWDINS 459
            K +E   + FLW+GP ++ K   I+W  + + +++GGLG   L   NK    + +W + S
Sbjct: 979  KEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVS 1038

Query: 458  NKSSIWVDWI-KNMIKW*HFWTMPITNN-ASWMWRKILQLRETIQDLIVHRIGNGADTFI 285
             +SS+WV+W+   +I+   FW+    ++  SWMW+K+L  R+  + +    I +G+ T  
Sbjct: 1039 RQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWKKLLNYRDVAKSMCKVEIKSGSSTSF 1098

Query: 284  *QDPWT 267
              D W+
Sbjct: 1099 WYDNWS 1104



 Score = 55.8 bits (133), Expect(2) = 5e-24
 Identities = 36/110 (32%), Positives = 53/110 (48%)
 Frame = -2

Query: 949  GLKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHTK 770
            GL ++L K+ +Y A +   ++  I  +       L V+YLG P        +  S    K
Sbjct: 875  GLHISLEKSTLYLAEVSELNRNNILSAFPFASGQLPVRYLGFPLLTKQMTTADYSPLLDK 934

Query: 769  ITSKIKTWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVLKGLRVL 620
            + SKI +W AR L  AGR+ LI  VI S+  +W S   LP   +K +  L
Sbjct: 935  VRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKL 984


>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
          Length = 504

 Score = 84.0 bits (206), Expect(2) = 3e-23
 Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 2/130 (1%)
 Frame = -1

Query: 650 QESAKRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVW 471
           ++  + ++   + +LW+G  ++     I+W  + + +++GGLG   L+  N     + +W
Sbjct: 163 RDCIREIDKMCSAYLWSGGELNTSKAKIAWAFVCKPKEEGGLGLRSLKEANDVCCLKLIW 222

Query: 470 DINSNKSSIWVDWIK-NMIKW*HFWTM-PITNNASWMWRKILQLRETIQDLIVHRIGNGA 297
            I S+  S+WV WI+ +++K   FW +   T+  SWMWRKIL+ R+  + L    I NGA
Sbjct: 223 RIISHADSLWVKWIQSSLLKKVFFWAVRENTSLGSWMWRKILKFRDIARTLCKVEINNGA 282

Query: 296 DTFI*QDPWT 267
            T    D W+
Sbjct: 283 QTSFWYDDWS 292



 Score = 52.4 bits (124), Expect(2) = 3e-23
 Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
 Frame = -2

Query: 946 LKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHTKI 767
           LK+++ K+ +Y AG+ +  +  +         +L V+YLGLP          SST +  +
Sbjct: 64  LKISMEKSTVYLAGLSHTTRQEVIDRFSFAVGTLPVRYLGLPL----VTKQFSSTDYLPL 119

Query: 766 TSKIK----TWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVLK 635
              IK    +W ARFL   GR+ LI  ++ S+  +W     LP+  ++
Sbjct: 120 IDHIKQKICSWSARFLSYTGRLNLISSILWSICNFWMGAFRLPRDCIR 167


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 80.1 bits (196), Expect(2) = 4e-23
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
 Frame = -1

Query: 638  KRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVWDINS 459
            KR+ES  +RFLW+G     K   +SW  +   + +GGLG   L   NK    R +W +  
Sbjct: 830  KRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFV 889

Query: 458  NKSSIWVDWIK-NMIKW*HFWTMPITNNASWMWRKILQLRETIQDLIVHRIGNGADTFI* 282
             K S+W DW   + +    FW +    + SW W+++L LR      +V ++GNG      
Sbjct: 890  AKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNGLKADYW 949

Query: 281  QDPWTA 264
             D WT+
Sbjct: 950  YDNWTS 955



 Score = 55.5 bits (132), Expect(2) = 4e-23
 Identities = 35/110 (31%), Positives = 59/110 (53%)
 Frame = -2

Query: 949  GLKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHTK 770
            GLK+N  K+++Y AG+ N  +   N +      +L ++YLGLP      +++       K
Sbjct: 727  GLKVNKDKSHLYLAGL-NQLESNANAAYGFPIGTLPIRYLGLPLMNRKLRIAEYEPLLEK 785

Query: 769  ITSKIKTWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVLKGLRVL 620
            IT++ ++W  + L  AGR++LI  VI     +W S  +LPK  +K +  L
Sbjct: 786  ITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESL 835


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 67.0 bits (162), Expect(2) = 4e-22
 Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
 Frame = -1

Query: 638  KRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVWDINS 459
            K VE+T  +FLWTG   ++    ++W  + + +  GGL    + L NKA I + +W I  
Sbjct: 825  KAVETTCRKFLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAITF 884

Query: 458  NKSSIWVDWIK-NMIKW*HFWTMPITNNASWMWRKILQLRETI 333
             +  +WV W+    IK  +   + +++N SW+ RKI + RE +
Sbjct: 885  KQDKLWVRWVNAYYIKRQNIENVTVSSNTSWILRKIFESRELL 927



 Score = 65.5 bits (158), Expect(2) = 4e-22
 Identities = 35/107 (32%), Positives = 60/107 (56%)
 Frame = -2

Query: 949  GLKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHTK 770
            GL+ ++ K+ IY  G+ + +  ++   +Q+   SL  +YLG+P        S       K
Sbjct: 721  GLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLIDK 780

Query: 769  ITSKIKTWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVLKGL 629
            IT++ + W A  L  AGR++L+K ++ SMQ YW  +  LPKK++K +
Sbjct: 781  ITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAV 827


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score = 75.1 bits (183), Expect(2) = 2e-20
 Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
 Frame = -1

Query: 638  KRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVWDINS 459
            K++ES  ++FLW G     K   +SW      + +GGLGF      NK  + R +W +  
Sbjct: 690  KKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFD 749

Query: 458  NKSSIWVDWIK-NMIKW*HFWTMPITNNASWMWRKILQLRETIQDLIVHRIGNGADTFI* 282
              +S+W  W + + +    FW +       W W+ +L LR   +  I  ++GNG      
Sbjct: 750  RDTSLWAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFW 809

Query: 281  QDPWTA 264
             D WT+
Sbjct: 810  FDCWTS 815



 Score = 51.2 bits (121), Expect(2) = 2e-20
 Identities = 29/110 (26%), Positives = 61/110 (55%)
 Frame = -2

Query: 949 GLKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHTK 770
           GLK+N  K+ ++ AG+  ++++  + +      +  ++YLGLP      +++       K
Sbjct: 587 GLKVNKDKSQLFQAGLDLSERIT-SAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEK 645

Query: 769 ITSKIKTWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVLKGLRVL 620
           +++++++W ++ L  AGR +LI  VI  +  +W S  +LPK  +K +  L
Sbjct: 646 LSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESL 695


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 75.1 bits (183), Expect(2) = 2e-20
 Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
 Frame = -1

Query: 638  KRVESTSARFLWTGPSMSNKMHCISWKRIARDRKDGGLGFHELELQNKAGIARQVWDINS 459
            K++ES  ++FLW G     K   +SW      + +GGLGF      NK  + R +W +  
Sbjct: 690  KKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFD 749

Query: 458  NKSSIWVDWIK-NMIKW*HFWTMPITNNASWMWRKILQLRETIQDLIVHRIGNGADTFI* 282
              +S+W  W + + +    FW +       W W+ +L LR   +  I  ++GNG      
Sbjct: 750  RDTSLWAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFW 809

Query: 281  QDPWTA 264
             D WT+
Sbjct: 810  FDCWTS 815



 Score = 51.2 bits (121), Expect(2) = 2e-20
 Identities = 29/110 (26%), Positives = 61/110 (55%)
 Frame = -2

Query: 949 GLKMNLHKNNIYCAGIRNNDKVRINHSLQIVRASLLVKYLGLPPHFF*TQVS*SSTPHTK 770
           GLK+N  K+ ++ AG+  ++++  + +      +  ++YLGLP      +++       K
Sbjct: 587 GLKVNKDKSQLFQAGLDLSERIT-SAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEK 645

Query: 769 ITSKIKTWKARFLLLAGRMELIK*VISSMQVYWSSVLMLPKKVLKGLRVL 620
           +++++++W ++ L  AGR +LI  VI  +  +W S  +LPK  +K +  L
Sbjct: 646 LSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESL 695