BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00028459
         (892 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi...   396   e-108
ref|XP_002306741.1| pentatricopeptide repeat-containing family p...   383   e-104
ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containi...   378   e-102
ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citr...   377   e-102
ref|XP_007048864.1| Pentatricopeptide repeat (PPR-like) superfam...   374   e-101
ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containi...   370   e-100
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,...   368   2e-99
ref|XP_007141857.1| hypothetical protein PHAVU_008G231600g [Phas...   365   1e-98
gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis...   363   6e-98
ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containi...   358   2e-96
ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containi...   358   2e-96
ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containi...   358   2e-96
ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containi...   355   1e-95
gb|EYU29595.1| hypothetical protein MIMGU_mgv1a025435mg [Mimulus...   347   4e-93
ref|XP_007216544.1| hypothetical protein PRUPE_ppb007734mg [Prun...   336   6e-90
ref|XP_002880012.1| pentatricopeptide repeat-containing protein ...   333   7e-89
ref|NP_181820.1| pentatricopeptide repeat-containing protein [Ar...   328   2e-87
ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ...   326   9e-87
ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Caps...   325   2e-86
ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutr...   322   1e-85

>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Vitis vinifera]
           gi|302143555|emb|CBI22116.3| unnamed protein product
           [Vitis vinifera]
          Length = 533

 Score =  396 bits (1018), Expect = e-108
 Identities = 194/263 (73%), Positives = 223/263 (84%)
 Frame = +2

Query: 104 NHPSLSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFS 283
           +HP LS+LEK CTTMKDL K+HA+L+KTGL K  +A S VL+F ATS  GDINYAYLVF+
Sbjct: 23  DHPHLSILEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLVFT 82

Query: 284 QIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSLFKAYAQLGLAH 463
           QI  PNLF+WNTIIRGFSQSSTPH AISLFIDML  S +QPHRLTYPS+FKAYAQLGLAH
Sbjct: 83  QIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQLGLAH 142

Query: 464 DGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDVVAWNSMIIGHA 643
            G+QLHGR+IKLGL+ DPFIRNTII+MY NCG+L E  + F +  DFD+VAWNSMI+G A
Sbjct: 143 YGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLA 202

Query: 644 KNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSVS 823
           K G++DESR+LFD MP R+T+SWNSMISGYVRNGRL++A DLF +MQ E IKPSEFT VS
Sbjct: 203 KCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEERIKPSEFTMVS 262

Query: 824 LLTACAHLGALKQGEWIHAYIKK 892
           LL A A LGALKQGEWIH YI+K
Sbjct: 263 LLNASARLGALKQGEWIHDYIRK 285



 Score = 87.4 bits (215), Expect = 7e-15
 Identities = 57/214 (26%), Positives = 96/214 (44%)
 Frame = +2

Query: 251 GDINYAYLVFSQIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSL 430
           G+++ +  +F ++   N  +WN++I G+ ++     A+ LF  M     I+P   T  SL
Sbjct: 205 GEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQM-QEERIKPSEFTMVSL 263

Query: 431 FKAYAQLGLAHDGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDV 610
             A A+LG    G  +H  I K   E +  +  +II MY  C                  
Sbjct: 264 LNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKC------------------ 305

Query: 611 VAWNSMIIGHAKNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNE 790
                        G I E+ ++F+M P +   SWN+MI G   NG   +A  LF R++  
Sbjct: 306 -------------GSIGEAFQVFEMAPLKGLSSWNTMILGLAMNGCENEAIQLFSRLECS 352

Query: 791 GIKPSEFTSVSLLTACAHLGALKQGEWIHAYIKK 892
            ++P + T V +LTAC + G + + +   + + K
Sbjct: 353 NLRPDDVTFVGVLTACNYSGLVDKAKEYFSLMSK 386


>ref|XP_002306741.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222856190|gb|EEE93737.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 509

 Score =  383 bits (983), Expect = e-104
 Identities = 192/258 (74%), Positives = 221/258 (85%), Gaps = 1/258 (0%)
 Frame = +2

Query: 122 MLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFSQIQHPN 301
           ML+K+CT+MKDL K+HA LIKTGL KDTIAASRVL+F  TS  GDINYAYLVF+QI++PN
Sbjct: 1   MLDKNCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAF-CTSPAGDINYAYLVFTQIRNPN 59

Query: 302 LFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPI-QPHRLTYPSLFKAYAQLGLAHDGSQL 478
           LF WNTIIRGFSQSSTPH AISLFIDM+++SP  QP RLTYPS+FKAYAQLGLAH+G+QL
Sbjct: 60  LFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQL 119

Query: 479 HGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDVVAWNSMIIGHAKNGQI 658
           HGR+IKLGLE+D FI+NTI+ MY NCG+L EA R+FD  + FDVV WN+MIIG AK G+I
Sbjct: 120 HGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEI 179

Query: 659 DESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSVSLLTAC 838
           D+SRRLFD M  R+T+SWNSMISGYVR GR  +A +LF RMQ EGIKPSEFT VSLL AC
Sbjct: 180 DKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNAC 239

Query: 839 AHLGALKQGEWIHAYIKK 892
           A LGAL+QGEWIH YI K
Sbjct: 240 ACLGALRQGEWIHDYIVK 257



 Score = 77.0 bits (188), Expect = 9e-12
 Identities = 52/206 (25%), Positives = 92/206 (44%)
 Frame = +2

Query: 251 GDINYAYLVFSQIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSL 430
           G+I+ +  +F ++   N  +WN++I G+ +      A+ LF  M     I+P   T  SL
Sbjct: 177 GEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRM-QEEGIKPSEFTMVSL 235

Query: 431 FKAYAQLGLAHDGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDV 610
             A A LG    G  +H  I+K     +  +   II MY+ CG + +A ++F       +
Sbjct: 236 LNACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGL 295

Query: 611 VAWNSMIIGHAKNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNE 790
             WNS+I+G A +G+ +E+ RLF                                ++++ 
Sbjct: 296 SCWNSLILGLAMSGRGNEAVRLFS-------------------------------KLESS 324

Query: 791 GIKPSEFTSVSLLTACAHLGALKQGE 868
            +KP   + + +LTAC H G + + +
Sbjct: 325 NLKPDHVSFIGVLTACNHAGMVDRAK 350


>ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Citrus sinensis]
          Length = 534

 Score =  378 bits (970), Expect = e-102
 Identities = 188/262 (71%), Positives = 220/262 (83%), Gaps = 1/262 (0%)
 Frame = +2

Query: 104 NHPSLSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFS 283
           + P LS+L+K CT+MKDL K+HA+LIKTGL KD IAASR+L+F  TS  GDINYAYLVF+
Sbjct: 19  DQPLLSLLDKQCTSMKDLKKIHAHLIKTGLAKDPIAASRILTF-CTSPAGDINYAYLVFT 77

Query: 284 QIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSLFKAYAQLGLAH 463
           QI+ PNLF WNTIIRGFSQSSTP  AI LFIDML +SPIQP RLTYPSLFKAYAQLGLA 
Sbjct: 78  QIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLAR 137

Query: 464 DGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDK-NSDFDVVAWNSMIIGH 640
           DG+QLHGR++K GLE D FI NTII+MY NCG+L EA  +FD+ +++FDVVAWNSMIIG 
Sbjct: 138 DGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGL 197

Query: 641 AKNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSV 820
           AK G+IDESRRLFD M SR+T+SWNSMISGYVRN + K+A +LF  MQ + IKPSEFT V
Sbjct: 198 AKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMV 257

Query: 821 SLLTACAHLGALKQGEWIHAYI 886
           SLL ACA LGA++QGEWIH ++
Sbjct: 258 SLLNACAKLGAIRQGEWIHNFL 279



 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 5/211 (2%)
 Frame = +2

Query: 251 GDINYAYLVFSQIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSL 430
           G+I+ +  +F ++   N  +WN++I G+ ++     A+ LF +M   + I+P   T  SL
Sbjct: 201 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN-IKPSEFTMVSL 259

Query: 431 FKAYAQLGLAHDGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDV 610
             A A+LG    G  +H  ++    E +  +   II MY  CG    A ++F+      +
Sbjct: 260 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 319

Query: 611 VAWNSMIIGHAKNGQIDESRRLFDMMPSRST----ISWNSMISGYVRNGRLKDAFDLFHR 778
             WNSM+ G A NG  +E+ +LF  + S +      S+ ++++    +G++  A D F  
Sbjct: 320 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLTPDYTSFIAVLTACNHSGKVNQAKDYFTL 379

Query: 779 M-QNEGIKPSEFTSVSLLTACAHLGALKQGE 868
           M +   IKPS      ++ A    G L++ E
Sbjct: 380 MTETYKIKPSIKHYSCMVDALGRAGLLEEAE 410


>ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citrus clementina]
           gi|557539373|gb|ESR50417.1| hypothetical protein
           CICLE_v10031197mg [Citrus clementina]
          Length = 534

 Score =  377 bits (968), Expect = e-102
 Identities = 188/262 (71%), Positives = 220/262 (83%), Gaps = 1/262 (0%)
 Frame = +2

Query: 104 NHPSLSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFS 283
           + P LS+L+K CT+MKDL K+HA+LIKTGL KD IAASR+L+F  TS  GDINYAYLVF+
Sbjct: 19  DQPLLSLLDKQCTSMKDLKKIHAHLIKTGLPKDPIAASRILAF-CTSPAGDINYAYLVFT 77

Query: 284 QIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSLFKAYAQLGLAH 463
           QI+ PNLF WNTIIRGFSQSSTP  AI LFIDML +SPIQP RLTYPSLFKAYAQLGLA 
Sbjct: 78  QIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLAR 137

Query: 464 DGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDK-NSDFDVVAWNSMIIGH 640
           DG+QLHGR++K GLE D FI NTII+MY NCG+L EA  +FD+ +++FDVVAWNSMIIG 
Sbjct: 138 DGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLIFDEVDTEFDVVAWNSMIIGL 197

Query: 641 AKNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSV 820
           AK G+IDESRRLFD M SR+T+SWNSMISGYVRN + K+A +LF  MQ + IKPSEFT V
Sbjct: 198 AKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMV 257

Query: 821 SLLTACAHLGALKQGEWIHAYI 886
           SLL ACA LGA++QGEWIH ++
Sbjct: 258 SLLNACAKLGAIRQGEWIHNFL 279



 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 52/206 (25%), Positives = 92/206 (44%)
 Frame = +2

Query: 251 GDINYAYLVFSQIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSL 430
           G+I+ +  +F ++   N  +WN++I G+ ++     A+ LF +M   + I+P   T  SL
Sbjct: 201 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN-IKPSEFTMVSL 259

Query: 431 FKAYAQLGLAHDGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDV 610
             A A+LG    G  +H  ++    E +  +   II MY  CG                 
Sbjct: 260 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP--------------- 304

Query: 611 VAWNSMIIGHAKNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNE 790
                           + + ++F+ +P +    WNSM+ G   NG   +A  LF  +Q+ 
Sbjct: 305 ----------------ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSS 348

Query: 791 GIKPSEFTSVSLLTACAHLGALKQGE 868
            +KP   + +++LTAC H G + Q +
Sbjct: 349 NLKPDYISFIAVLTACNHSGKVNQAK 374


>ref|XP_007048864.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao] gi|508701125|gb|EOX93021.1| Pentatricopeptide
           repeat (PPR-like) superfamily protein [Theobroma cacao]
          Length = 538

 Score =  374 bits (961), Expect = e-101
 Identities = 189/264 (71%), Positives = 218/264 (82%), Gaps = 1/264 (0%)
 Frame = +2

Query: 104 NHPSLSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFS 283
           + P LS+LE +CT+MKDL KLHA LIKTGL+ D IAASRVL+F   S  GD+NYAYLVF+
Sbjct: 21  DQPYLSLLENNCTSMKDLKKLHAQLIKTGLVNDIIAASRVLAF-CVSPAGDMNYAYLVFT 79

Query: 284 QIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSLFKAYAQLGLAH 463
           QI++PNLFTWNTIIRGFSQSS P IAISLFIDML  S IQP RLTYPS+FKAYAQLGLA 
Sbjct: 80  QIKNPNLFTWNTIIRGFSQSSNPQIAISLFIDMLVGSSIQPERLTYPSVFKAYAQLGLAC 139

Query: 464 DGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFD-KNSDFDVVAWNSMIIGH 640
           DG QLHGR+IKLGL+ D FIRNTII+MY NCG L EA R+FD ++ + D+VAWNSMIIG 
Sbjct: 140 DGRQLHGRVIKLGLDYDQFIRNTIIYMYANCGLLSEAWRMFDEEHMELDIVAWNSMIIGL 199

Query: 641 AKNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSV 820
           AK G++DESRRLF+ M SR+T+SWNSMISGYVRNGR  +A +LF  MQ E I+PSEFT V
Sbjct: 200 AKCGEVDESRRLFNKMVSRNTVSWNSMISGYVRNGRFLEALELFQEMQEEHIRPSEFTMV 259

Query: 821 SLLTACAHLGALKQGEWIHAYIKK 892
           SLL ACA LGA+ QG+WIH YI K
Sbjct: 260 SLLNACACLGAITQGKWIHDYILK 283



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 48/150 (32%), Positives = 79/150 (52%)
 Frame = +2

Query: 251 GDINYAYLVFSQIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSL 430
           G+++ +  +F+++   N  +WN++I G+ ++     A+ LF +M     I+P   T  SL
Sbjct: 203 GEVDESRRLFNKMVSRNTVSWNSMISGYVRNGRFLEALELFQEM-QEEHIRPSEFTMVSL 261

Query: 431 FKAYAQLGLAHDGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDV 610
             A A LG    G  +H  I+K   E +  +   II MY  CG   +A ++F  +    +
Sbjct: 262 LNACACLGAITQGKWIHDYILKQNFELNGIVVTAIIDMYCKCGNAEKALQVFTTSPKEGL 321

Query: 611 VAWNSMIIGHAKNGQIDESRRLFDMMPSRS 700
             WNSMI+G A NG  +E+R+LF  + S S
Sbjct: 322 SCWNSMILGLATNGCENEARQLFSKLESLS 351


>ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 550

 Score =  370 bits (950), Expect = e-100
 Identities = 182/261 (69%), Positives = 212/261 (81%)
 Frame = +2

Query: 110 PSLSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFSQI 289
           P L MLE  CT MKDL K+HA+LIKTGL  DT+AASRVL+F A S  GDINYAY+VF  I
Sbjct: 22  PHLFMLENQCTNMKDLQKIHAHLIKTGLANDTVAASRVLAFCA-SPAGDINYAYMVFRHI 80

Query: 290 QHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSLFKAYAQLGLAHDG 469
            +PNLF WNTIIRGFS SS P  AISLFIDML +S +QP RLTYPS+FKAYAQLGLAHDG
Sbjct: 81  HNPNLFIWNTIIRGFSNSSNPEAAISLFIDMLVTSTVQPQRLTYPSVFKAYAQLGLAHDG 140

Query: 470 SQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDVVAWNSMIIGHAKN 649
           +QLHGR++KLGLESD F+RNTII MY+NCG L EA R+FD++ +FD+VAWNSMI+G +K 
Sbjct: 141 AQLHGRVVKLGLESDQFVRNTIIHMYSNCGLLSEARRVFDEDLEFDIVAWNSMIMGLSKC 200

Query: 650 GQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSVSLL 829
           G++ ESRRLFD MP R++ISWNSMI G VRNG   +A DLF  MQ + IKPSEFT VSLL
Sbjct: 201 GEVGESRRLFDKMPQRNSISWNSMIGGSVRNGMYTEALDLFGEMQKQKIKPSEFTMVSLL 260

Query: 830 TACAHLGALKQGEWIHAYIKK 892
            A A LGA++QGEWIH YI+K
Sbjct: 261 NASAQLGAIRQGEWIHEYIRK 281



 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 55/207 (26%), Positives = 95/207 (45%)
 Frame = +2

Query: 242 SLVGDINYAYLVFSQIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTY 421
           S  G++  +  +F ++   N  +WN++I G  ++     A+ LF +M     I+P   T 
Sbjct: 198 SKCGEVGESRRLFDKMPQRNSISWNSMIGGSVRNGMYTEALDLFGEM-QKQKIKPSEFTM 256

Query: 422 PSLFKAYAQLGLAHDGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSD 601
            SL  A AQLG    G  +H  I K  ++ +P +   II MY+ CG + +A  +F+    
Sbjct: 257 VSLLNASAQLGAIRQGEWIHEYIRKNHIQLNPIVVTAIINMYSKCGSIEKAVHVFEAAPR 316

Query: 602 FDVVAWNSMIIGHAKNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRM 781
             +  WNS+I+G A NG  +E                               A +LF R+
Sbjct: 317 TGLSCWNSIIMGLATNGCEEE-------------------------------AIELFSRL 345

Query: 782 QNEGIKPSEFTSVSLLTACAHLGALKQ 862
           ++    P + + + +LTAC+H G +++
Sbjct: 346 KSSSFVPDDVSFLGVLTACSHSGMVEK 372


>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  368 bits (945), Expect = 2e-99
 Identities = 180/259 (69%), Positives = 217/259 (83%)
 Frame = +2

Query: 116 LSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFSQIQH 295
           LSML+K+CTTMKDL K+H+ LIKTGL KDT AASR+L+F A S  GDINYAYLVF QIQ+
Sbjct: 25  LSMLDKNCTTMKDLKKIHSQLIKTGLAKDTNAASRILAFCA-SPAGDINYAYLVFVQIQN 83

Query: 296 PNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSLFKAYAQLGLAHDGSQ 475
           PN+F WNTIIRGFS+SS P  +ISL+IDML +SP+QP RLTYPS+FKA+AQL LA +G+Q
Sbjct: 84  PNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFKAFAQLDLASEGAQ 143

Query: 476 LHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDVVAWNSMIIGHAKNGQ 655
           LHG++IKLGLE+D FIRNTI+FMY NCG+  EA ++FD+  DFD+VAWN+MI+G AK G 
Sbjct: 144 LHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMGVAKCGL 203

Query: 656 IDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSVSLLTA 835
           +DESRRLFD M  R+ +SWNSMISGYVRNGR  DA +LF +MQ E I+PSEFT VSLL A
Sbjct: 204 VDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERIEPSEFTMVSLLNA 263

Query: 836 CAHLGALKQGEWIHAYIKK 892
           CA LGA++QGEWIH Y+ K
Sbjct: 264 CACLGAIRQGEWIHDYMVK 282



 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 5/211 (2%)
 Frame = +2

Query: 251 GDINYAYLVFSQIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSL 430
           G ++ +  +F ++   N  +WN++I G+ ++     A+ LF  M     I+P   T  SL
Sbjct: 202 GLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVER-IEPSEFTMVSL 260

Query: 431 FKAYAQLGLAHDGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDV 610
             A A LG    G  +H  ++K   E +P +   II MY+ CG + +A ++F       +
Sbjct: 261 LNACACLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQSAPRRGL 320

Query: 611 VAWNSMIIGHAKNGQIDESRRLFDMMPSR----STISWNSMISGYVRNGRLKDAFDLFHR 778
             WNSMI+G A NGQ +E+ +LF ++ S       +S+ ++++     G +  A D F  
Sbjct: 321 SCWNSMILGLAMNGQENEALQLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDYFLL 380

Query: 779 MQNE-GIKPSEFTSVSLLTACAHLGALKQGE 868
           M+++  IKP       ++      G L++ E
Sbjct: 381 MRDKYKIKPGIKHFSCMVDVLGRAGLLEEAE 411


>ref|XP_007141857.1| hypothetical protein PHAVU_008G231600g [Phaseolus vulgaris]
           gi|561014990|gb|ESW13851.1| hypothetical protein
           PHAVU_008G231600g [Phaseolus vulgaris]
          Length = 525

 Score =  365 bits (937), Expect = 1e-98
 Identities = 176/263 (66%), Positives = 218/263 (82%)
 Frame = +2

Query: 104 NHPSLSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFS 283
           +HP L+ML+  CT MKDL K+H ++IKTGL  D IAASRVL+F A+S  GDINYAYLVF+
Sbjct: 22  DHPCLTMLQNQCTNMKDLQKIHPHIIKTGLALDHIAASRVLTFCASSS-GDINYAYLVFT 80

Query: 284 QIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSLFKAYAQLGLAH 463
            I +PNL+ WNTIIRGFS+SSTP  AISLF+DMLYS+ ++P RLTYPS+FKAYAQLG  H
Sbjct: 81  GIPNPNLYCWNTIIRGFSRSSTPQFAISLFVDMLYSA-VEPQRLTYPSVFKAYAQLGAGH 139

Query: 464 DGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDVVAWNSMIIGHA 643
           DG+QLHGR++KLGLE D FI NTI++MY N G + EA R+FD+  + DVVA NSMI+G A
Sbjct: 140 DGAQLHGRVVKLGLEKDQFISNTILYMYANSGLMSEARRVFDEPLELDVVACNSMIMGLA 199

Query: 644 KNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSVS 823
           K G++D+SRRLFD MP+R+ +SWNSMISGYVRNGRL +  +LF +MQ EG++PSEFT VS
Sbjct: 200 KCGEVDKSRRLFDNMPTRTAVSWNSMISGYVRNGRLTEGLELFRKMQEEGVEPSEFTMVS 259

Query: 824 LLTACAHLGALKQGEWIHAYIKK 892
           LL+ACAHLGAL+ GEW+H YIK+
Sbjct: 260 LLSACAHLGALQHGEWVHDYIKR 282



 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 59/238 (24%), Positives = 118/238 (49%), Gaps = 4/238 (1%)
 Frame = +2

Query: 161 KLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFSQIQHPNLFTWNTIIRGFSQ 340
           +LH  ++K GL KD   ++ +L   A S  G ++ A  VF +    ++   N++I G ++
Sbjct: 143 QLHGRVVKLGLEKDQFISNTILYMYANS--GLMSEARRVFDEPLELDVVACNSMIMGLAK 200

Query: 341 SSTPHIAISLFIDMLYSSPIQPHRLTYPSLFKAYAQLGLAHDGSQLHGRIIKLGLESDPF 520
                 +  LF +M   + +     ++ S+   Y + G   +G +L  ++ + G+E   F
Sbjct: 201 CGEVDKSRRLFDNMPTRTAV-----SWNSMISGYVRNGRLTEGLELFRKMQEEGVEPSEF 255

Query: 521 IRNTIIFMYTNCGYLIEAGRLFDK----NSDFDVVAWNSMIIGHAKNGQIDESRRLFDMM 688
              +++    + G L     + D     N   +V+   ++I  + K G I+++  +F   
Sbjct: 256 TMVSLLSACAHLGALQHGEWVHDYIKRGNFKLNVIVLTAIIDMYCKCGSIEKAVEVFAAS 315

Query: 689 PSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSVSLLTACAHLGALKQ 862
           P+R    WNS+I G   NG  ++A + F ++++  IKP   + + +LTAC +LGA+++
Sbjct: 316 PTRGLPCWNSIIIGLALNGHEREAIEYFSKLESSNIKPDCVSFIGVLTACKYLGAVRE 373


>gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis]
           gi|587904202|gb|EXB92403.1| hypothetical protein
           L484_021387 [Morus notabilis]
          Length = 530

 Score =  363 bits (931), Expect = 6e-98
 Identities = 180/263 (68%), Positives = 216/263 (82%)
 Frame = +2

Query: 104 NHPSLSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFS 283
           + P LSMLEK C TM DL K+HA+LIKTGLI  TIA+SR+L+F A S  G+INYA +VFS
Sbjct: 25  DQPHLSMLEKRCATMSDLRKIHAHLIKTGLISHTIASSRLLAFCA-SPAGNINYALMVFS 83

Query: 284 QIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSLFKAYAQLGLAH 463
           QIQ+PNLF WNTIIRGFS+SSTP  AI LFIDML  SP++P RLTYPS+FKAYAQLGLA 
Sbjct: 84  QIQNPNLFIWNTIIRGFSRSSTPQTAIFLFIDMLVGSPLEPQRLTYPSVFKAYAQLGLAC 143

Query: 464 DGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDVVAWNSMIIGHA 643
            G+QLHGR+IKLGL+ D F+RNTII MY NCG+L EA +LFD++S+ D+VAWNSMI+G +
Sbjct: 144 FGAQLHGRVIKLGLDCDRFVRNTIIHMYINCGFLSEARQLFDESSELDLVAWNSMIMGLS 203

Query: 644 KNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSVS 823
           K G++ ESRRLFD MP R+++SWNSMISGYVRNG+  +A +LF +MQ EGIK SEFT VS
Sbjct: 204 KCGEVGESRRLFDRMPLRNSVSWNSMISGYVRNGKCVEALELFGKMQGEGIKASEFTMVS 263

Query: 824 LLTACAHLGALKQGEWIHAYIKK 892
           LL A   LGA++QGEWIH YI K
Sbjct: 264 LLNASGRLGAIRQGEWIHEYITK 286



 Score = 77.0 bits (188), Expect = 9e-12
 Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 6/215 (2%)
 Frame = +2

Query: 242 SLVGDINYAYLVFSQIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTY 421
           S  G++  +  +F ++   N  +WN++I G+ ++     A+ LF  M     I+    T 
Sbjct: 203 SKCGEVGESRRLFDRMPLRNSVSWNSMISGYVRNGKCVEALELFGKM-QGEGIKASEFTM 261

Query: 422 PSLFKAYAQLGLAHDGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSD 601
            SL  A  +LG    G  +H  I K G+E +  +   II MY  CG + +A  +F     
Sbjct: 262 VSLLNASGRLGAIRQGEWIHEYITKNGIELNVIVVTAIIDMYCKCGSVNKALSVFKTAPK 321

Query: 602 FDVVAWNSMIIGHAKNGQIDESRRLFDMMPSR-----STISWNSMISGYVRNGRLKDAFD 766
             +  WNSM++G A NG  +E+  LF  + S        +S+ ++++    +G +  A D
Sbjct: 322 LGLSCWNSMVMGLAMNGCEEEALELFSRLESSIDLRPDGVSFLAVLTACNHSGMVDKARD 381

Query: 767 LFHRMQNE-GIKPSEFTSVSLLTACAHLGALKQGE 868
            F  M+ +  I+PS      ++      G L++ E
Sbjct: 382 YFSLMRGKYNIEPSTRHYSCMVDVLGKAGHLEEAE 416


>ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Glycine max]
          Length = 534

 Score =  358 bits (919), Expect = 2e-96
 Identities = 175/263 (66%), Positives = 217/263 (82%)
 Frame = +2

Query: 104 NHPSLSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFS 283
           + P L+ML+  CT MKDL K+HA++IKTGL   T+AASRVL+F A+S  GDINYAYL+F+
Sbjct: 24  DQPCLTMLQTQCTNMKDLQKIHAHIIKTGLAHHTVAASRVLTFCASSS-GDINYAYLLFT 82

Query: 284 QIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSLFKAYAQLGLAH 463
            I  PNL+ WNTIIRGFS+SSTPH+AISLF+DML SS + P RLTYPS+FKAYAQLG  +
Sbjct: 83  TIPSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSS-VLPQRLTYPSVFKAYAQLGAGY 141

Query: 464 DGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDVVAWNSMIIGHA 643
           DG+QLHGR++KLGLE D FI+NTII+MY N G L EA R+FD+  D DVVA NSMI+G A
Sbjct: 142 DGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLA 201

Query: 644 KNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSVS 823
           K G++D+SRRLFD MP+R+ ++WNSMISGYVRN RL +A +LF +MQ E ++PSEFT VS
Sbjct: 202 KCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGERVEPSEFTMVS 261

Query: 824 LLTACAHLGALKQGEWIHAYIKK 892
           LL+ACAHLGALK GEW+H Y+K+
Sbjct: 262 LLSACAHLGALKHGEWVHDYVKR 284



 Score = 78.2 bits (191), Expect = 4e-12
 Identities = 58/261 (22%), Positives = 103/261 (39%), Gaps = 29/261 (11%)
 Frame = +2

Query: 161 KLHANLIKTGLIKDTIAASRVLSFRATSLV-----------------------------G 253
           +LH  ++K GL KD    + ++   A S +                             G
Sbjct: 145 QLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLAKCG 204

Query: 254 DINYAYLVFSQIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSLF 433
           +++ +  +F  +      TWN++I G+ ++     A+ LF  M     ++P   T  SL 
Sbjct: 205 EVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKM-QGERVEPSEFTMVSLL 263

Query: 434 KAYAQLGLAHDGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDVV 613
            A A LG    G  +H  + +   E +  +   II MY  CG +++A             
Sbjct: 264 SACAHLGALKHGEWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKA------------- 310

Query: 614 AWNSMIIGHAKNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEG 793
                               +F+  P+R    WNS+I G   NG  + A + F +++   
Sbjct: 311 ------------------IEVFEASPTRGLSCWNSIIIGLALNGYERKAIEYFSKLEASD 352

Query: 794 IKPSEFTSVSLLTACAHLGAL 856
           +KP   + + +LTAC ++GA+
Sbjct: 353 LKPDHVSFIGVLTACKYIGAV 373


>ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Solanum lycopersicum]
          Length = 522

 Score =  358 bits (918), Expect = 2e-96
 Identities = 174/264 (65%), Positives = 217/264 (82%), Gaps = 1/264 (0%)
 Frame = +2

Query: 104 NHPSLSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSL-VGDINYAYLVF 280
           + P L MLE  CTTM DL K+HA+LIK+GLIKD IAASRVL+F A S  +GDINYA LVF
Sbjct: 17  DQPYLHMLETKCTTMTDLKKIHAHLIKSGLIKDKIAASRVLAFSAKSPPIGDINYANLVF 76

Query: 281 SQIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSLFKAYAQLGLA 460
           + I++PN FTWNTIIRGFS+SSTP  AI LFI+ML +S +QPH LTYPS+FKAYA+ G+A
Sbjct: 77  THIENPNPFTWNTIIRGFSESSTPQYAIHLFIEMLNNSQVQPHLLTYPSVFKAYARGGIA 136

Query: 461 HDGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDVVAWNSMIIGH 640
            +G+QLHGRI+KLGLE D FIRNT+++MY +CG+L+EA +LFD++   DVV+WNSMIIG 
Sbjct: 137 KNGAQLHGRIMKLGLEFDTFIRNTLLYMYASCGFLVEARKLFDEDEIEDVVSWNSMIIGL 196

Query: 641 AKNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSV 820
           AK+G+ID+S RLF  MP+R+ +SWNSMISG+VRNG+  +A +LF  MQ E +KPSEFT V
Sbjct: 197 AKSGEIDDSWRLFSKMPTRNDVSWNSMISGFVRNGKWNEALELFSTMQEENVKPSEFTLV 256

Query: 821 SLLTACAHLGALKQGEWIHAYIKK 892
           SLL AC HLGAL+QG WI+ Y+KK
Sbjct: 257 SLLNACGHLGALEQGNWIYKYVKK 280



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 59/225 (26%), Positives = 103/225 (45%)
 Frame = +2

Query: 194 IKDTIAASRVLSFRATSLVGDINYAYLVFSQIQHPNLFTWNTIIRGFSQSSTPHIAISLF 373
           I+D ++ + ++   A S  G+I+ ++ +FS++   N  +WN++I GF ++   + A+ LF
Sbjct: 183 IEDVVSWNSMIIGLAKS--GEIDDSWRLFSKMPTRNDVSWNSMISGFVRNGKWNEALELF 240

Query: 374 IDMLYSSPIQPHRLTYPSLFKAYAQLGLAHDGSQLHGRIIKLGLESDPFIRNTIIFMYTN 553
             M   + ++P   T  SL  A   LG    G+ ++  + K  +E +  +   II MY  
Sbjct: 241 STMQEEN-VKPSEFTLVSLLNACGHLGALEQGNWIYKYVKKNNVELNVIVVTAIIDMYCK 299

Query: 554 CGYLIEAGRLFDKNSDFDVVAWNSMIIGHAKNGQIDESRRLFDMMPSRSTISWNSMISGY 733
           C  +  A  +F  +S+                               +   SWNSMI G 
Sbjct: 300 CANVEMAWHVFVSSSN-------------------------------KGLSSWNSMILGL 328

Query: 734 VRNGRLKDAFDLFHRMQNEGIKPSEFTSVSLLTACAHLGALKQGE 868
             NG   DA  LF R+Q   +KP   + + +LTAC H G +++ +
Sbjct: 329 ATNGFEDDAIKLFARLQCSILKPDSVSFIGVLTACNHSGLVEKAK 373


>ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cucumis sativus]
           gi|449530724|ref|XP_004172343.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cucumis sativus]
          Length = 543

 Score =  358 bits (918), Expect = 2e-96
 Identities = 174/263 (66%), Positives = 217/263 (82%)
 Frame = +2

Query: 104 NHPSLSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFS 283
           N P LSM++K CTTM+DL + HA+LIK+G   ++ AASR+L+F A+ L G+++YAYLVF 
Sbjct: 23  NQPYLSMVDKYCTTMRDLQQFHAHLIKSGQAIESFAASRILAFCASPL-GNMDYAYLVFL 81

Query: 284 QIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSLFKAYAQLGLAH 463
           Q+Q+PNLF+WNT+IRGFSQSS P IA+ LFIDML SS ++P RLTYPS+FKAY+QLGLAH
Sbjct: 82  QMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLGLAH 141

Query: 464 DGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDVVAWNSMIIGHA 643
           DG+QLHGRIIKLGL+ DPFIRNTI++MY   G+L EA R+F++  +FDVV+WNSMI+G A
Sbjct: 142 DGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLA 201

Query: 644 KNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSVS 823
           K G+IDESR+LFD MP ++ ISWNSMI GYVRNG  K+A  LF +MQ E I+PSEFT VS
Sbjct: 202 KCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVS 261

Query: 824 LLTACAHLGALKQGEWIHAYIKK 892
           LL A A +GAL+QG WIH YIKK
Sbjct: 262 LLNASAQIGALRQGVWIHEYIKK 284



 Score = 87.8 bits (216), Expect = 5e-15
 Identities = 76/288 (26%), Positives = 125/288 (43%), Gaps = 34/288 (11%)
 Frame = +2

Query: 107 HPSLSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRAT--------------- 241
           +PS+           D  +LH  +IK GL  D    + +L   AT               
Sbjct: 127 YPSIFKAYSQLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEM 186

Query: 242 --------------SLVGDINYAYLVFSQIQHPNLFTWNTIIRGFSQSSTPHIAISLFID 379
                         +  G+I+ +  +F ++   N  +WN++I G+ ++     A+ LFI 
Sbjct: 187 EFDVVSWNSMILGLAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIK 246

Query: 380 MLYSSPIQPHRLTYPSLFKAYAQLGLAHDGSQLHGRIIKLGLESDPFIRNTIIFMYTNCG 559
           M     IQP   T  SL  A AQ+G    G  +H  I K  L+ +  +   II MY  CG
Sbjct: 247 M-QEERIQPSEFTMVSLLNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCKCG 305

Query: 560 YLIEAGRLFDKNSDFDVVAWNSMIIGHAKNGQIDESRRLFDMMPSRS----TISWNSMIS 727
            +  A ++F+K     + +WNSMI G A NG   E+  +F M+ S S     IS+ ++++
Sbjct: 306 SIGNALQVFEKIPCRSLSSWNSMIFGLAVNGCEKEAILVFKMLESSSLKPDCISFMAVLT 365

Query: 728 GYVRNGRLKDAFDLFHRMQNE-GIKPSEFTSVSLLTACAHLGALKQGE 868
                  + +  + F RM+N   I+PS      ++   +  G L++ E
Sbjct: 366 ACNHGAMVDEGMEFFSRMKNTYRIEPSIKHYNLMVDMISRAGFLEEAE 413


>ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Solanum tuberosum]
          Length = 522

 Score =  355 bits (912), Expect = 1e-95
 Identities = 174/264 (65%), Positives = 216/264 (81%), Gaps = 1/264 (0%)
 Frame = +2

Query: 104 NHPSLSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSL-VGDINYAYLVF 280
           + P L MLE  CTTM DL K+HA+LIK+GLIKD IA+SRVL+F A S  +GDINYA LVF
Sbjct: 17  DQPYLHMLETKCTTMTDLKKIHAHLIKSGLIKDKIASSRVLAFSAKSPPIGDINYANLVF 76

Query: 281 SQIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSLFKAYAQLGLA 460
           + I++PNLFTWNTIIRGFS+SSTP  AI LFI+ML +S +QPH LTYPS+FKAYA+ GL 
Sbjct: 77  THIENPNLFTWNTIIRGFSESSTPQYAIHLFIEMLNNSQVQPHLLTYPSVFKAYARGGLV 136

Query: 461 HDGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDVVAWNSMIIGH 640
            +G+QLHGRIIKLGLE D FIRNT+++MY +CG+L+EA +LFD++   DVV+WNSMI+G 
Sbjct: 137 KNGAQLHGRIIKLGLEFDTFIRNTMLYMYASCGFLVEARKLFDEDEIEDVVSWNSMIMGL 196

Query: 641 AKNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSV 820
           AK+G+ID+S RLF  M +R+ +SWNSMISG+VRNG+  +A +LF  MQ E IKPSEFT V
Sbjct: 197 AKSGEIDDSWRLFSKMSTRNDVSWNSMISGFVRNGKWNEALELFSTMQEENIKPSEFTLV 256

Query: 821 SLLTACAHLGALKQGEWIHAYIKK 892
           SLL AC HLGAL+QG WI+ Y+KK
Sbjct: 257 SLLNACGHLGALEQGNWIYKYVKK 280



 Score = 84.0 bits (206), Expect = 7e-14
 Identities = 63/233 (27%), Positives = 108/233 (46%)
 Frame = +2

Query: 194 IKDTIAASRVLSFRATSLVGDINYAYLVFSQIQHPNLFTWNTIIRGFSQSSTPHIAISLF 373
           I+D ++ + ++   A S  G+I+ ++ +FS++   N  +WN++I GF ++   + A+ LF
Sbjct: 183 IEDVVSWNSMIMGLAKS--GEIDDSWRLFSKMSTRNDVSWNSMISGFVRNGKWNEALELF 240

Query: 374 IDMLYSSPIQPHRLTYPSLFKAYAQLGLAHDGSQLHGRIIKLGLESDPFIRNTIIFMYTN 553
             M   + I+P   T  SL  A   LG    G+ ++  + K  +E +  +   II MY  
Sbjct: 241 STMQEEN-IKPSEFTLVSLLNACGHLGALEQGNWIYKYVKKNNVELNVIVVTAIIDMYCK 299

Query: 554 CGYLIEAGRLFDKNSDFDVVAWNSMIIGHAKNGQIDESRRLFDMMPSRSTISWNSMISGY 733
           CG +               +AW+                 +F  + ++   SWNSMI G 
Sbjct: 300 CGNV--------------EMAWH-----------------VFISISNKGLSSWNSMILGL 328

Query: 734 VRNGRLKDAFDLFHRMQNEGIKPSEFTSVSLLTACAHLGALKQGEWIHAYIKK 892
             NG   DA  LF R+Q   +KP   + + +LTAC H G + + +     +KK
Sbjct: 329 ATNGFEDDAIKLFARLQCSILKPDSVSFIGVLTACNHSGLVDKAKDYFQLMKK 381


>gb|EYU29595.1| hypothetical protein MIMGU_mgv1a025435mg [Mimulus guttatus]
          Length = 505

 Score =  347 bits (890), Expect = 4e-93
 Identities = 172/264 (65%), Positives = 207/264 (78%), Gaps = 1/264 (0%)
 Frame = +2

Query: 104 NHPSLSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSF-RATSLVGDINYAYLVF 280
           + P LS+LE +C T+KDL K+HA LIKTGL KDTIA SR+L+F  A     D++YA+ VF
Sbjct: 4   DQPFLSLLETNCHTIKDLTKIHAQLIKTGLAKDTIAVSRILAFCAAPGPARDLDYAFSVF 63

Query: 281 SQIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSLFKAYAQLGLA 460
           S I+ PNLFTWNTIIRGF QSS PH+AISLF+DML +S ++P  LTYPS+FKAY QLGLA
Sbjct: 64  SHIEKPNLFTWNTIIRGFCQSSHPHVAISLFVDMLTNSTLEPENLTYPSVFKAYTQLGLA 123

Query: 461 HDGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDVVAWNSMIIGH 640
            DG+QLHGRIIKLG E DPFIRN+II MY +CG    A +LFD++ D DVVAWNSM++G 
Sbjct: 124 GDGAQLHGRIIKLGFEHDPFIRNSIIHMYADCGLFGSARKLFDEDEDTDVVAWNSMVMGL 183

Query: 641 AKNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSV 820
           AK G++DES RLF  +P R+ ISWN+MISGYVRNG+  DA  LF  MQ   I+PSEFT V
Sbjct: 184 AKCGEVDESWRLFCKIPCRNDISWNTMISGYVRNGKWVDALSLFAEMQQRQIRPSEFTLV 243

Query: 821 SLLTACAHLGALKQGEWIHAYIKK 892
           S+L ACA LGAL+QG+WIH YIKK
Sbjct: 244 SMLNACAKLGALEQGKWIHRYIKK 267



 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 1/199 (0%)
 Frame = +2

Query: 251 GDINYAYLVFSQIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSL 430
           G+++ ++ +F +I   N  +WNT+I G+ ++     A+SLF +M     I+P   T  S+
Sbjct: 187 GEVDESWRLFCKIPCRNDISWNTMISGYVRNGKWVDALSLFAEM-QQRQIRPSEFTLVSM 245

Query: 431 FKAYAQLGLAHDGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDV 610
             A A+LG    G  +H  I K  + +    RNTI+                        
Sbjct: 246 LNACAKLGALEQGKWIHRYIKKSDINN--IDRNTIVV----------------------- 280

Query: 611 VAWNSMIIGHAKNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRM-QN 787
               ++I  + K G I  +R +F+  P ++   WNSMI G   NG  ++AF LF  + Q+
Sbjct: 281 ---TAIIDMYCKCGDIKTAREVFESTPQKALSGWNSMILGLATNGFEEEAFQLFTELEQS 337

Query: 788 EGIKPSEFTSVSLLTACAH 844
             + P   + + +LTA  H
Sbjct: 338 SNLNPDSVSFIGVLTASNH 356


>ref|XP_007216544.1| hypothetical protein PRUPE_ppb007734mg [Prunus persica]
           gi|462412694|gb|EMJ17743.1| hypothetical protein
           PRUPE_ppb007734mg [Prunus persica]
          Length = 297

 Score =  336 bits (862), Expect = 6e-90
 Identities = 164/237 (69%), Positives = 198/237 (83%)
 Frame = +2

Query: 110 PSLSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFSQI 289
           P LSMLEK CT MKDL K+HA+LIKTGL+ DT+AASRVL+F A S  G+INYAY+VF  I
Sbjct: 22  PHLSMLEKQCTNMKDLQKIHAHLIKTGLVSDTVAASRVLAFCA-SPAGNINYAYMVFRNI 80

Query: 290 QHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSLFKAYAQLGLAHDG 469
           Q+PNLF WNTIIRGFS+S +P IAISLFIDML +S I+PHRLTYPS+FKAYAQLGLA DG
Sbjct: 81  QNPNLFIWNTIIRGFSESPSPEIAISLFIDMLVTSAIEPHRLTYPSVFKAYAQLGLAQDG 140

Query: 470 SQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDVVAWNSMIIGHAKN 649
           +QLHGRI+KLGLESD FIRNTII MY NCG+LIEA R+FD++ + D VAWNSMI+G +K 
Sbjct: 141 AQLHGRILKLGLESDQFIRNTIIHMYANCGFLIEARRMFDEDLECDTVAWNSMIMGLSKW 200

Query: 650 GQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSV 820
           G++ E++RLFD    R+++SWNSMISG+VRNG+  +A +LF  MQ E +KPSEFT V
Sbjct: 201 GEVSEAKRLFDKFSLRNSVSWNSMISGFVRNGKYTEALELFSEMQEERVKPSEFTMV 257


>ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325851|gb|EFH56271.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 542

 Score =  333 bits (853), Expect = 7e-89
 Identities = 165/258 (63%), Positives = 201/258 (77%), Gaps = 1/258 (0%)
 Frame = +2

Query: 116 LSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFSQIQH 295
           L +++  C+TM++L ++HANLIKTGLI DT+AASRVL+F   S   D NYAYLVF++I H
Sbjct: 28  LRLIDTRCSTMRELKQIHANLIKTGLISDTVAASRVLAFCCAS-PSDRNYAYLVFTRINH 86

Query: 296 PNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSP-IQPHRLTYPSLFKAYAQLGLAHDGS 472
            N F WNTIIRGFS+SS P +AIS+FIDML SSP ++P RLTYPS+FKAYA LGLA DG 
Sbjct: 87  KNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYASLGLARDGR 146

Query: 473 QLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDVVAWNSMIIGHAKNG 652
           QLHGR+IK GLE D FIRNT++ MY  CG L+EA RLF     FDVVAWNS+I+G AK G
Sbjct: 147 QLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGLAKCG 206

Query: 653 QIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSVSLLT 832
            ID++++LFD MP R+ +SWNSMISG+VRNGR KDA ++F  MQ   +KP  FT VSLL 
Sbjct: 207 LIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGFTMVSLLN 266

Query: 833 ACAHLGALKQGEWIHAYI 886
           ACA+LGA +QG WIH YI
Sbjct: 267 ACAYLGASEQGRWIHKYI 284



 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 72/270 (26%), Positives = 127/270 (47%), Gaps = 8/270 (2%)
 Frame = +2

Query: 107 HPSLSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFSQ 286
           +PS+     S    +D  +LH  +IK GL  D+   + +L    T   G +  A+ +F  
Sbjct: 129 YPSVFKAYASLGLARDGRQLHGRVIKEGLEDDSFIRNTMLHMYVTC--GCLVEAWRLFVG 186

Query: 287 IQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSLFKAYAQLGLAHD 466
           +   ++  WN+II G ++      A  LF +M      Q + +++ S+   + + G   D
Sbjct: 187 MMGFDVVAWNSIIMGLAKCGLIDQAQKLFDEMP-----QRNGVSWNSMISGFVRNGRFKD 241

Query: 467 GSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYL--IEAGRLFDKNSDFDVVAWNSMIIG- 637
             ++   + +  ++ D F   T++ +   C YL   E GR   K    +    NS++I  
Sbjct: 242 ALEMFREMQERDVKPDGF---TMVSLLNACAYLGASEQGRWIHKYIVRNRFELNSIVITA 298

Query: 638 ----HAKNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPS 805
               + K G  +E  ++F+  P++    WNSMI G   NG  + A DLF  ++  G++P 
Sbjct: 299 LIDMYCKCGCFEEGLKVFECAPTKQLSCWNSMILGLANNGCEERAMDLFLELERTGLEPD 358

Query: 806 EFTSVSLLTACAHLGAL-KQGEWIHAYIKK 892
             + + +LTACAH G + K GE+     +K
Sbjct: 359 SVSFIGVLTACAHSGEVHKAGEFFRLMREK 388


>ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g42920, chloroplastic; Flags: Precursor
           gi|4512663|gb|AAD21717.1| hypothetical protein
           [Arabidopsis thaliana] gi|20197867|gb|AAM15291.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|110738441|dbj|BAF01146.1| hypothetical protein
           [Arabidopsis thaliana] gi|330255093|gb|AEC10187.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 559

 Score =  328 bits (840), Expect = 2e-87
 Identities = 162/258 (62%), Positives = 199/258 (77%), Gaps = 1/258 (0%)
 Frame = +2

Query: 116 LSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFSQIQH 295
           L +++  C+TM++L ++HA+LIKTGLI DT+ ASRVL+F   S   D+NYAYLVF++I H
Sbjct: 28  LRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCAS-PSDMNYAYLVFTRINH 86

Query: 296 PNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSP-IQPHRLTYPSLFKAYAQLGLAHDGS 472
            N F WNTIIRGFS+SS P +AIS+FIDML SSP ++P RLTYPS+FKAY +LG A DG 
Sbjct: 87  KNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGR 146

Query: 473 QLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDVVAWNSMIIGHAKNG 652
           QLHG +IK GLE D FIRNT++ MY  CG LIEA R+F     FDVVAWNSMI+G AK G
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCG 206

Query: 653 QIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSVSLLT 832
            ID+++ LFD MP R+ +SWNSMISG+VRNGR KDA D+F  MQ + +KP  FT VSLL 
Sbjct: 207 LIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLN 266

Query: 833 ACAHLGALKQGEWIHAYI 886
           ACA+LGA +QG WIH YI
Sbjct: 267 ACAYLGASEQGRWIHEYI 284



 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 56/214 (26%), Positives = 94/214 (43%)
 Frame = +2

Query: 251 GDINYAYLVFSQIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSL 430
           G I+ A  +F ++   N  +WN++I GF ++     A+ +F +M     ++P   T  SL
Sbjct: 206 GLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREM-QEKDVKPDGFTMVSL 264

Query: 431 FKAYAQLGLAHDGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDV 610
             A A LG +  G  +H  I++   E +  +   +I MY  CG                 
Sbjct: 265 LNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGC---------------- 308

Query: 611 VAWNSMIIGHAKNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNE 790
                          I+E   +F+  P +    WNSMI G   NG  + A DLF  ++  
Sbjct: 309 ---------------IEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERS 353

Query: 791 GIKPSEFTSVSLLTACAHLGALKQGEWIHAYIKK 892
           G++P   + + +LTACAH G + + +     +K+
Sbjct: 354 GLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKE 387


>ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518779|gb|AET00403.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 542

 Score =  326 bits (835), Expect = 9e-87
 Identities = 164/267 (61%), Positives = 211/267 (79%), Gaps = 4/267 (1%)
 Frame = +2

Query: 104 NHPSLSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFS 283
           NHP L+ML+  CTT+   H+++ ++IKTGL  + IA++R L+F A S  G+INYAY +F 
Sbjct: 27  NHPCLTMLQNHCTTINHFHQIYPHIIKTGLTLNPIASTRALTFCA-SPSGNINYAYKLFV 85

Query: 284 QIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSLFKAYAQLGLAH 463
           ++ +PNL++WNTIIR FS+SSTP  AISLF+DMLYS  IQP  LTYPS+FKAYAQLG AH
Sbjct: 86  RMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQ-IQPQYLTYPSVFKAYAQLGHAH 144

Query: 464 DGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNS----DFDVVAWNSMI 631
            G+QLHGR++KLGL++D FI NTII+MY N G + EA R+FD       D DVVA NSMI
Sbjct: 145 YGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMI 204

Query: 632 IGHAKNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEF 811
           +G+AK G+IDESR LFD M +R+++SWNSMISGYVRNG+L +A +LF++MQ EG + SEF
Sbjct: 205 MGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEF 264

Query: 812 TSVSLLTACAHLGALKQGEWIHAYIKK 892
           T VSLL ACAHLGAL+ G+W+H YIK+
Sbjct: 265 TMVSLLNACAHLGALQHGKWVHDYIKR 291



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 1/205 (0%)
 Frame = +2

Query: 251 GDINYAYLVFSQIQHPNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSL 430
           G+I+ +  +F  +      +WN++I G+ ++     A+ LF  M      +    T  SL
Sbjct: 211 GEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEG-FEVSEFTMVSL 269

Query: 431 FKAYAQLGLAHDGSQLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDV 610
             A A LG    G  +H  I +   E +  +   II MY  CG +  A  +F+      +
Sbjct: 270 LNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGL 329

Query: 611 VAWNSMIIGHAKNGQIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNE 790
             WNS+IIG A                                NG  ++AF+ F ++++ 
Sbjct: 330 SCWNSIIIGLA-------------------------------MNGHEREAFEFFSKLESS 358

Query: 791 G-IKPSEFTSVSLLTACAHLGALKQ 862
             +KP   + + +LTAC HLGA+ +
Sbjct: 359 KLLKPDSVSFIGVLTACKHLGAINK 383


>ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Capsella rubella]
           gi|565472276|ref|XP_006293940.1| hypothetical protein
           CARUB_v10022931mg [Capsella rubella]
           gi|482562647|gb|EOA26837.1| hypothetical protein
           CARUB_v10022931mg [Capsella rubella]
           gi|482562648|gb|EOA26838.1| hypothetical protein
           CARUB_v10022931mg [Capsella rubella]
          Length = 555

 Score =  325 bits (832), Expect = 2e-86
 Identities = 160/260 (61%), Positives = 200/260 (76%), Gaps = 1/260 (0%)
 Frame = +2

Query: 116 LSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFSQIQH 295
           L +++  C+TM++L ++H NLIKTGLI DT+AASRVL+F   S   D+NYAYLVF++I H
Sbjct: 23  LRLIDTQCSTMRELKQIHGNLIKTGLISDTVAASRVLAFCCAS-PSDMNYAYLVFTRINH 81

Query: 296 PNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSP-IQPHRLTYPSLFKAYAQLGLAHDGS 472
            N F WNTIIRGFSQSS P +AIS+FIDML SSP ++P  LTYPS+FKAY +LG A DG 
Sbjct: 82  KNPFVWNTIIRGFSQSSFPEMAISIFIDMLCSSPSVKPQNLTYPSVFKAYGRLGQAIDGR 141

Query: 473 QLHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDVVAWNSMIIGHAKNG 652
           QLHGR++K GLE D FIRNT++ MY   G L+EA R+F   +DFDVVAWNSMI+G AK G
Sbjct: 142 QLHGRVLKEGLEDDSFIRNTMLQMYVTSGCLVEAWRIFVGMTDFDVVAWNSMIMGLAKCG 201

Query: 653 QIDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSVSLLT 832
            I ++++LFD MP R+ +SWNSMISG+VRNGR KDA ++F  MQ   +KP  FT VSLL 
Sbjct: 202 LISQAQQLFDEMPHRNEVSWNSMISGFVRNGRFKDALEMFREMQERNVKPDGFTMVSLLN 261

Query: 833 ACAHLGALKQGEWIHAYIKK 892
           ACA+LGA +QG WIH YI +
Sbjct: 262 ACAYLGANEQGRWIHEYIAR 281



 Score = 87.4 bits (215), Expect = 7e-15
 Identities = 65/242 (26%), Positives = 116/242 (47%), Gaps = 9/242 (3%)
 Frame = +2

Query: 152 DLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFSQIQHPNLFTWNTIIRG 331
           D  +LH  ++K GL  D+   + +L    TS  G +  A+ +F  +   ++  WN++I G
Sbjct: 139 DGRQLHGRVLKEGLEDDSFIRNTMLQMYVTS--GCLVEAWRIFVGMTDFDVVAWNSMIMG 196

Query: 332 FSQSSTPHIAISLFIDMLYSSPIQPHR--LTYPSLFKAYAQLGLAHDGSQLHGRIIKLGL 505
            ++      A  LF +M       PHR  +++ S+   + + G   D  ++   + +  +
Sbjct: 197 LAKCGLISQAQQLFDEM-------PHRNEVSWNSMISGFVRNGRFKDALEMFREMQERNV 249

Query: 506 ESDPFIRNTIIFMYTNCGYL--IEAGRLFDKNSDFDVVAWNSMIIG-----HAKNGQIDE 664
           + D F   T++ +   C YL   E GR   +    +    NS++I      + K G I+E
Sbjct: 250 KPDGF---TMVSLLNACAYLGANEQGRWIHEYIARNRFELNSIVITALIEMYCKCGCIEE 306

Query: 665 SRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSVSLLTACAH 844
             ++F+  P +    WNSMI G   NG  + A DLF  ++  G++P   + + +LTACA+
Sbjct: 307 GLKVFECAPKKQLSCWNSMILGLANNGCEERAMDLFLELERFGLEPDSVSFIGVLTACAY 366

Query: 845 LG 850
            G
Sbjct: 367 SG 368


>ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutrema salsugineum]
           gi|557112734|gb|ESQ53018.1| hypothetical protein
           EUTSA_v10017572mg [Eutrema salsugineum]
          Length = 546

 Score =  322 bits (825), Expect = 1e-85
 Identities = 154/259 (59%), Positives = 199/259 (76%)
 Frame = +2

Query: 116 LSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRATSLVGDINYAYLVFSQIQH 295
           + +++  C+TM++L ++HANLIKTGLI DTIAASRVL+F  TS   D++YAYL+F++I H
Sbjct: 28  IRLIDTQCSTMRELKQIHANLIKTGLISDTIAASRVLAFCCTS-PSDMSYAYLLFTRINH 86

Query: 296 PNLFTWNTIIRGFSQSSTPHIAISLFIDMLYSSPIQPHRLTYPSLFKAYAQLGLAHDGSQ 475
            N F WNTIIRGFS+SS P ++I++FIDM  S+  +P RLTYPS+FKAYA LG A DG Q
Sbjct: 87  KNPFVWNTIIRGFSRSSFPEMSITIFIDMFSSASAKPQRLTYPSVFKAYASLGKARDGMQ 146

Query: 476 LHGRIIKLGLESDPFIRNTIIFMYTNCGYLIEAGRLFDKNSDFDVVAWNSMIIGHAKNGQ 655
           LHG +IK GLE D FIRNT++ MY  CG  +EA R+F     FDVVAWNSM++G A+ G 
Sbjct: 147 LHGMVIKEGLEDDSFIRNTMLHMYATCGCFVEAWRIFMAMKHFDVVAWNSMMMGLARYGL 206

Query: 656 IDESRRLFDMMPSRSTISWNSMISGYVRNGRLKDAFDLFHRMQNEGIKPSEFTSVSLLTA 835
           I+++++LFD MP R+ ISWNSMISG+V+NGR KDA ++F +MQ   +KP  FT VSLL A
Sbjct: 207 IEQAQKLFDEMPQRNEISWNSMISGFVKNGRFKDALEMFRKMQERNVKPDGFTMVSLLNA 266

Query: 836 CAHLGALKQGEWIHAYIKK 892
           CA+LGA +QG WIH YI K
Sbjct: 267 CAYLGASEQGRWIHEYIVK 285



 Score = 87.8 bits (216), Expect = 5e-15
 Identities = 70/288 (24%), Positives = 125/288 (43%), Gaps = 34/288 (11%)
 Frame = +2

Query: 107 HPSLSMLEKSCTTMKDLHKLHANLIKTGLIKDTIAASRVLSFRAT--------------- 241
           +PS+     S    +D  +LH  +IK GL  D+   + +L   AT               
Sbjct: 128 YPSVFKAYASLGKARDGMQLHGMVIKEGLEDDSFIRNTMLHMYATCGCFVEAWRIFMAMK 187

Query: 242 --------------SLVGDINYAYLVFSQIQHPNLFTWNTIIRGFSQSSTPHIAISLFID 379
                         +  G I  A  +F ++   N  +WN++I GF ++     A+ +F  
Sbjct: 188 HFDVVAWNSMMMGLARYGLIEQAQKLFDEMPQRNEISWNSMISGFVKNGRFKDALEMFRK 247

Query: 380 MLYSSPIQPHRLTYPSLFKAYAQLGLAHDGSQLHGRIIKLGLESDPFIRNTIIFMYTNCG 559
           M     ++P   T  SL  A A LG +  G  +H  I+K   E +  +   +I MY  CG
Sbjct: 248 M-QERNVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVKNRFELNSIVITALIDMYCKCG 306

Query: 560 YLIEAGRLFDKNSDFDVVAWNSMIIGHAKNGQIDESRRLFDMMPSR----STISWNSMIS 727
            + E  R+F+   +  +  WNSM++G A NG  + +  LF  + S      ++S+  +++
Sbjct: 307 CIEEGLRVFESAPNKQLSCWNSMVLGLANNGYEERAMDLFSELESSDLEPDSVSFIGVLT 366

Query: 728 GYVRNGRLKDAFDLFHRMQNEG-IKPSEFTSVSLLTACAHLGALKQGE 868
               +G++ +A + F  M+ +  I+PS      ++      G L++ E
Sbjct: 367 ACAYSGKVDEAGEFFRLMREKYLIEPSIKHYTCMVNVLGGAGLLEEAE 414