BLASTX nr result
ID: Akebia27_contig00027513
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00027513
(423 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADD29939.1| ribosomal protein S3 [Bulnesia arborea] 83 4e-14
gb|ADD29926.1| ribosomal protein S3 [Antirrhinum majus] 82 8e-14
ref|YP_004021188.1| ribosomal protein S3 [Castanea mollissima] g... 82 1e-13
ref|YP_009024830.1| ribosomal protein S3 (chloroplast) [Trigonob... 81 1e-13
ref|YP_740689.1| ribosomal protein S3 [Nandina domestica] gi|122... 81 1e-13
ref|YP_008081404.1| ribosomal protein S3 (chloroplast) [Tetracen... 81 2e-13
gb|ADD29944.1| ribosomal protein S3 [Heuchera sanguinea] 81 2e-13
gb|ADD29938.1| ribosomal protein S3 [Berberidopsis corallina] 81 2e-13
gb|ADD29932.1| ribosomal protein S3 [Meliosma aff. cuneifolia Mo... 81 2e-13
ref|YP_009020258.1| ribosomal protein S3 (chloroplast) [Castanop... 80 2e-13
gb|ADD29942.1| ribosomal protein S3 [Ficus sp. Moore 315] 80 3e-13
ref|YP_008963730.1| ribosomal protein S3 (chloroplast) [Liquidam... 80 4e-13
ref|YP_008963517.1| ribosomal protein S3 (chloroplast) [Penthoru... 80 4e-13
gb|ADD29945.1| ribosomal protein S3 [Liquidambar styraciflua] 80 4e-13
ref|YP_008815976.1| ribosomal protein S3 (chloroplast) [Lindenbe... 79 5e-13
gb|ABU85182.1| ribosomal protein S3 [Anethum graveolens] 79 5e-13
ref|YP_001294223.1| ribosomal protein S3 [Buxus microphylla] gi|... 79 5e-13
ref|YP_009019830.1| ribosomal protein S3 (chloroplast) [Vitis ro... 79 6e-13
ref|YP_008963434.1| ribosomal protein S3 (chloroplast) [Sedum sa... 79 6e-13
ref|YP_008145748.1| ribosomal protein S3 (chloroplast) [Glycine ... 79 6e-13
>gb|ADD29939.1| ribosomal protein S3 [Bulnesia arborea]
Length = 215
Score = 82.8 bits (203), Expect = 4e-14
Identities = 38/48 (79%), Positives = 45/48 (93%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLIRG 144
+D I+ Y+QKNM+ISSGVEGIACIEIQKRIDLIQ+I+Y GFPKLLI+G
Sbjct: 40 RDCIQNYIQKNMKISSGVEGIACIEIQKRIDLIQIIIYMGFPKLLIKG 87
>gb|ADD29926.1| ribosomal protein S3 [Antirrhinum majus]
Length = 220
Score = 82.0 bits (201), Expect = 8e-14
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLI 138
+D+IK YVQKNMRISSG EGIACIEIQKRIDLIQVI++ GFPKLLI
Sbjct: 40 RDFIKNYVQKNMRISSGTEGIACIEIQKRIDLIQVIIFMGFPKLLI 85
>ref|YP_004021188.1| ribosomal protein S3 [Castanea mollissima]
gi|443267346|ref|YP_007375082.1| ribosomal protein S3
[Quercus rubra] gi|290487128|gb|ADD29948.1| ribosomal
protein S3 [Quercus nigra] gi|309321558|gb|ADO65098.1|
ribosomal protein S3 [Castanea mollissima]
gi|441421961|gb|AGC31285.1| ribosomal protein S3
[Quercus rubra]
Length = 221
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/48 (79%), Positives = 45/48 (93%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLIRG 144
+D+IK YVQKN++ISSGVEGIACI+IQKRIDLIQVI+Y GFPKLL+ G
Sbjct: 40 RDWIKNYVQKNIQISSGVEGIACIKIQKRIDLIQVIIYMGFPKLLLEG 87
>ref|YP_009024830.1| ribosomal protein S3 (chloroplast) [Trigonobalanus doichangensis]
gi|597710401|gb|AHN16162.1| ribosomal protein S3
(chloroplast) [Trigonobalanus doichangensis]
Length = 221
Score = 81.3 bits (199), Expect = 1e-13
Identities = 37/48 (77%), Positives = 45/48 (93%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLIRG 144
+D+IK YVQKN++ISSGVEG+ACI+IQKRIDLIQVI+Y GFPKLL+ G
Sbjct: 40 RDWIKNYVQKNIQISSGVEGVACIKIQKRIDLIQVIIYMGFPKLLLEG 87
>ref|YP_740689.1| ribosomal protein S3 [Nandina domestica]
gi|122165923|sp|Q09FS2.1|RR3_NANDO RecName: Full=30S
ribosomal protein S3, chloroplastic
gi|114054510|gb|ABI49903.1| ribosomal protein S3
[Nandina domestica]
Length = 218
Score = 81.3 bits (199), Expect = 1e-13
Identities = 41/48 (85%), Positives = 43/48 (89%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLIRG 144
QD I+ YVQKNMRISSGVEGIA IEIQKRIDLIQVI+Y GFPKLLI G
Sbjct: 40 QDCIRNYVQKNMRISSGVEGIARIEIQKRIDLIQVIIYMGFPKLLIEG 87
>ref|YP_008081404.1| ribosomal protein S3 (chloroplast) [Tetracentron sinense]
gi|511348504|ref|YP_008081432.1| ribosomal protein S3
(chloroplast) [Tetracentron sinense]
gi|511348570|ref|YP_008081496.1| ribosomal protein S3
(chloroplast) [Trochodendron aralioides]
gi|511348597|ref|YP_008081523.1| ribosomal protein S3
(chloroplast) [Trochodendron aralioides]
gi|290487132|gb|ADD29950.1| ribosomal protein S3
[Trochodendron aralioides] gi|479279242|gb|AGJ72096.1|
ribosomal protein S3 (chloroplast) [Tetracentron
sinense] gi|479279269|gb|AGJ72123.1| ribosomal protein
S3 (chloroplast) [Tetracentron sinense]
gi|479279335|gb|AGJ72188.1| ribosomal protein S3
(chloroplast) [Trochodendron aralioides]
gi|479279362|gb|AGJ72215.1| ribosomal protein S3
(chloroplast) [Trochodendron aralioides]
Length = 218
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/48 (85%), Positives = 43/48 (89%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLIRG 144
+D IK YVQKNMRISSGVEGIA IEIQKRIDLIQVI+Y GFPKLLI G
Sbjct: 40 RDCIKNYVQKNMRISSGVEGIARIEIQKRIDLIQVIIYMGFPKLLIEG 87
>gb|ADD29944.1| ribosomal protein S3 [Heuchera sanguinea]
Length = 217
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/48 (85%), Positives = 43/48 (89%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLIRG 144
+D IK YVQKNMRISSGVEGIA IEIQKRIDLIQVI+Y GFPKLLI G
Sbjct: 40 RDCIKNYVQKNMRISSGVEGIARIEIQKRIDLIQVIIYMGFPKLLIEG 87
>gb|ADD29938.1| ribosomal protein S3 [Berberidopsis corallina]
Length = 218
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/48 (85%), Positives = 43/48 (89%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLIRG 144
+D IK YVQKNMRISSGVEGIA IEIQKRIDLIQVI+Y GFPKLLI G
Sbjct: 40 RDCIKNYVQKNMRISSGVEGIARIEIQKRIDLIQVIIYMGFPKLLIEG 87
>gb|ADD29932.1| ribosomal protein S3 [Meliosma aff. cuneifolia Moore 333]
Length = 218
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/48 (85%), Positives = 43/48 (89%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLIRG 144
+D IK YVQKNMRISSGVEGIA IEIQKRIDLIQVI+Y GFPKLLI G
Sbjct: 40 RDCIKNYVQKNMRISSGVEGIARIEIQKRIDLIQVIIYIGFPKLLIEG 87
>ref|YP_009020258.1| ribosomal protein S3 (chloroplast) [Castanopsis echinocarpa]
gi|589387989|gb|AHL16945.1| ribosomal protein S3
(chloroplast) [Castanopsis echinocarpa]
Length = 221
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/48 (77%), Positives = 45/48 (93%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLIRG 144
+++IK YVQKN++ISSGVEGIACI+IQKRIDLIQVI+Y GFPKLL+ G
Sbjct: 40 REWIKNYVQKNIKISSGVEGIACIKIQKRIDLIQVIIYMGFPKLLLEG 87
>gb|ADD29942.1| ribosomal protein S3 [Ficus sp. Moore 315]
Length = 215
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/50 (80%), Positives = 43/50 (86%)
Frame = +1
Query: 10 IKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLIRG*KVAE 159
IK YVQKNM+ISS VEGIACIEIQKRIDLIQVI+Y GFPKLLI K+ E
Sbjct: 43 IKNYVQKNMKISSSVEGIACIEIQKRIDLIQVIIYMGFPKLLIEHQKIEE 92
>ref|YP_008963730.1| ribosomal protein S3 (chloroplast) [Liquidambar formosana]
gi|491650409|gb|AGL13469.1| ribosomal protein S3
(chloroplast) [Liquidambar formosana]
Length = 218
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/48 (83%), Positives = 43/48 (89%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLIRG 144
+D IK YVQKNMRISSGVEGIA IEIQKRIDLIQVI+Y GFPKLL+ G
Sbjct: 40 RDCIKNYVQKNMRISSGVEGIARIEIQKRIDLIQVIIYMGFPKLLMEG 87
>ref|YP_008963517.1| ribosomal protein S3 (chloroplast) [Penthorum chinense]
gi|403226818|gb|AFR25697.1| ribosomal protein S3
(chloroplast) [Penthorum chinense]
Length = 218
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/48 (83%), Positives = 43/48 (89%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLIRG 144
+D IK YVQKNM+ISSGVEGIA IEIQKRIDLIQVI+Y GFPKLLI G
Sbjct: 40 RDCIKNYVQKNMKISSGVEGIARIEIQKRIDLIQVIIYMGFPKLLIEG 87
>gb|ADD29945.1| ribosomal protein S3 [Liquidambar styraciflua]
Length = 218
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/48 (83%), Positives = 43/48 (89%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLIRG 144
+D IK YVQKNMRISSGVEGIA IEIQKRIDLIQVI+Y GFPKLL+ G
Sbjct: 40 RDCIKNYVQKNMRISSGVEGIARIEIQKRIDLIQVIIYMGFPKLLMEG 87
>ref|YP_008815976.1| ribosomal protein S3 (chloroplast) [Lindenbergia philippensis]
gi|557136903|emb|CDI43957.1| ribosomal protein S3
(chloroplast) [Lindenbergia philippensis]
Length = 220
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLI 138
+D+IKTYVQKNMRISSG EGIA IEIQKRIDLIQVI++ GFPKLLI
Sbjct: 40 RDFIKTYVQKNMRISSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 85
>gb|ABU85182.1| ribosomal protein S3 [Anethum graveolens]
Length = 218
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLI 138
+D+IK YVQKNM+ISSGVEGIA IEIQKRIDLIQVI+Y GFPKLLI
Sbjct: 40 RDFIKNYVQKNMKISSGVEGIARIEIQKRIDLIQVIIYMGFPKLLI 85
>ref|YP_001294223.1| ribosomal protein S3 [Buxus microphylla]
gi|172048683|sp|A6MM75.1|RR3_BUXMI RecName: Full=30S
ribosomal protein S3, chloroplastic
gi|146762323|gb|ABQ45287.1| ribosomal protein S3 [Buxus
microphylla]
Length = 218
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/48 (83%), Positives = 42/48 (87%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLIRG 144
+D IK YVQKNMRISSG EGIA IEIQKRIDLIQVI+Y GFPKLLI G
Sbjct: 40 RDCIKNYVQKNMRISSGAEGIARIEIQKRIDLIQVIIYMGFPKLLIEG 87
>ref|YP_009019830.1| ribosomal protein S3 (chloroplast) [Vitis rotundifolia]
gi|586947452|gb|AHJ91249.1| ribosomal protein S3
(chloroplast) [Vitis rotundifolia]
Length = 218
Score = 79.0 bits (193), Expect = 6e-13
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLIRG 144
+D IK YVQKN+RISSGVEGIA IEIQKRIDLIQVI+Y GFPKLL+ G
Sbjct: 40 RDCIKNYVQKNIRISSGVEGIARIEIQKRIDLIQVIIYMGFPKLLVEG 87
>ref|YP_008963434.1| ribosomal protein S3 (chloroplast) [Sedum sarmentosum]
gi|402797569|gb|AFQ99101.1| ribosomal protein S3
(chloroplast) [Sedum sarmentosum]
Length = 218
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/46 (82%), Positives = 43/46 (93%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLI 138
+D+IK YVQKNMRI+SGVEGIA IEIQKRIDLIQ+I+Y GFPKLLI
Sbjct: 40 RDFIKNYVQKNMRIASGVEGIAHIEIQKRIDLIQIIIYMGFPKLLI 85
>ref|YP_008145748.1| ribosomal protein S3 (chloroplast) [Glycine cyrtoloba]
gi|526176017|ref|YP_008145829.1| ribosomal protein S3
(chloroplast) [Glycine stenophita]
gi|514252936|gb|AGO44197.1| ribosomal protein S3
(chloroplast) [Glycine cyrtoloba]
gi|514253101|gb|AGO44360.1| ribosomal protein S3
(chloroplast) [Glycine stenophita]
Length = 216
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +1
Query: 1 QDYIKTYVQKNMRISSGVEGIACIEIQKRIDLIQVILYTGFPKLLIRG 144
+DYIK Y+QKN+R+SSGVEGI I+IQKRIDLIQVI+Y GFPKLLI G
Sbjct: 40 RDYIKNYIQKNIRVSSGVEGIGQIKIQKRIDLIQVIIYMGFPKLLIEG 87