BLASTX nr result

ID: Akebia27_contig00027371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00027371
         (366 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006829732.1| hypothetical protein AMTR_s00126p00110160 [A...    58   1e-06
ref|XP_006351994.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    56   5e-06
ref|XP_006351993.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    56   5e-06
ref|XP_006351991.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    56   5e-06
ref|XP_004251555.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    56   5e-06
ref|XP_002323192.2| hypothetical protein POPTR_0016s02340g [Popu...    56   6e-06

>ref|XP_006829732.1| hypothetical protein AMTR_s00126p00110160 [Amborella trichopoda]
           gi|548835251|gb|ERM97148.1| hypothetical protein
           AMTR_s00126p00110160 [Amborella trichopoda]
          Length = 654

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/32 (90%), Positives = 32/32 (100%)
 Frame = -2

Query: 101 LDISKLGISEEIVSALSRRGITQLFPIQRAVL 6
           LDI+KLGISEEIVS+LSRRGIT+LFPIQRAVL
Sbjct: 79  LDIAKLGISEEIVSSLSRRGITELFPIQRAVL 110


>ref|XP_006351994.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like isoform X4
           [Solanum tuberosum]
          Length = 670

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -2

Query: 101 LDISKLGISEEIVSALSRRGITQLFPIQRAVLD 3
           L+ISKLGISEEIVSAL++RGIT LFPIQRAVL+
Sbjct: 111 LEISKLGISEEIVSALAQRGITSLFPIQRAVLE 143


>ref|XP_006351993.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like isoform X3
           [Solanum tuberosum]
          Length = 679

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -2

Query: 101 LDISKLGISEEIVSALSRRGITQLFPIQRAVLD 3
           L+ISKLGISEEIVSAL++RGIT LFPIQRAVL+
Sbjct: 111 LEISKLGISEEIVSALAQRGITSLFPIQRAVLE 143


>ref|XP_006351991.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like isoform X1
           [Solanum tuberosum] gi|565370772|ref|XP_006351992.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like
           isoform X2 [Solanum tuberosum]
          Length = 688

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -2

Query: 101 LDISKLGISEEIVSALSRRGITQLFPIQRAVLD 3
           L+ISKLGISEEIVSAL++RGIT LFPIQRAVL+
Sbjct: 111 LEISKLGISEEIVSALAQRGITSLFPIQRAVLE 143


>ref|XP_004251555.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Solanum
           lycopersicum]
          Length = 643

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -2

Query: 101 LDISKLGISEEIVSALSRRGITQLFPIQRAVLD 3
           L+ISKLGISEEIVSAL++RGIT LFPIQRAVL+
Sbjct: 111 LEISKLGISEEIVSALAQRGITSLFPIQRAVLE 143


>ref|XP_002323192.2| hypothetical protein POPTR_0016s02340g [Populus trichocarpa]
           gi|550320645|gb|EEF04953.2| hypothetical protein
           POPTR_0016s02340g [Populus trichocarpa]
          Length = 624

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 9/69 (13%)
 Frame = -2

Query: 182 FHVSSSSVGFPITTETNGLDS-------STRGNP--LDISKLGISEEIVSALSRRGITQL 30
           FHV S  + F  ++ T   ++         +GN   L+IS+LGIS+EIV AL+++GIT+L
Sbjct: 65  FHVKSGPLDFKASSVTETFNAVPDYGYDEGKGNEEGLEISRLGISQEIVGALAKKGITKL 124

Query: 29  FPIQRAVLD 3
           FPIQRAVL+
Sbjct: 125 FPIQRAVLE 133


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