BLASTX nr result
ID: Akebia27_contig00027173
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00027173
(763 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici... 205 2e-85
gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus... 198 4e-85
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu... 201 2e-84
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot... 205 9e-84
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 196 1e-83
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V... 196 1e-83
emb|CBI21038.3| unnamed protein product [Vitis vinifera] 196 1e-83
ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prun... 204 2e-83
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata] 205 3e-83
gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis] 202 4e-83
gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya] 202 7e-83
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 202 2e-82
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 202 2e-82
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa] 201 2e-82
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco... 203 4e-82
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 201 4e-82
gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [L... 200 8e-82
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 201 1e-81
ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis tha... 190 1e-81
ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Caps... 192 2e-81
>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
putative [Ricinus communis]
Length = 1203
Score = 205 bits (522), Expect(2) = 2e-85
Identities = 112/184 (60%), Positives = 127/184 (69%), Gaps = 18/184 (9%)
Frame = +2
Query: 251 LGYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILE 430
LG L + VS+PSLE+ F KHG FSE+K+ +QV+KG V++AKNPCLHP DIRILE
Sbjct: 773 LGVLEHGQCFIQVSNPSLESCFWKHGSRFSESKKKLQVVKGTVVVAKNPCLHPGDIRILE 832
Query: 431 AVDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFYD 610
AVD PELHHL DCLVFPQKGDRPHT EASGSDLDGD YFVTWDENLIPPS RS PM YD
Sbjct: 833 AVDAPELHHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWLPMQYD 892
Query: 611 CPS----------QEIV-----TPSQ*SVDPSCNAHVVLADQSEKGALDGDCKK---LAA 736
Q+I+ ++ CNAHVV AD SE GALD +C K LAA
Sbjct: 893 AAEAKQLNRPVNHQDIIDFFAKNMVNENLGAICNAHVVHADLSEYGALDENCIKLAELAA 952
Query: 737 TAVN 748
TAV+
Sbjct: 953 TAVD 956
Score = 137 bits (346), Expect(2) = 2e-85
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +1
Query: 7 MVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQLEG 186
MV +LN+M + DVAF+++T+SCAEQGNTAA+MLSAGF P++EPHL GML +RAAQL G
Sbjct: 692 MVSKLNQMFMDADVAFDVVTASCAEQGNTAAIMLSAGFNPKTEPHLCGMLTCIRAAQLWG 751
Query: 187 LFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
L KTRIFVPSGR +MGCLDELGVLEHGQC
Sbjct: 752 LREKTRIFVPSGRWLMGCLDELGVLEHGQC 781
>gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus guttatus]
Length = 1196
Score = 198 bits (503), Expect(2) = 4e-85
Identities = 107/180 (59%), Positives = 121/180 (67%), Gaps = 16/180 (8%)
Frame = +2
Query: 251 LGYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILE 430
LG L + VS+PSLE+ F+KHG FS AK+ ++VIKGLV IAKNPCLHP D+RILE
Sbjct: 774 LGVLEHGQCFIQVSNPSLEDCFVKHGSEFSGAKKKLEVIKGLVAIAKNPCLHPGDVRILE 833
Query: 431 AVDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFYD 610
AVD P LHHL DCLVFPQKG+RPHT EASGSDLDGD YFVTWDENL+PPS RS +PM Y
Sbjct: 834 AVDCPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLMPPSKRSWTPMEY- 892
Query: 611 CPSQEIVTPSQ----------------*SVDPSCNAHVVLADQSEKGALDGDCKKLAATA 742
P + P + S+ CNAHVV AD SE GALD C KLA A
Sbjct: 893 APGEVKQLPREVKHTDIIEFFTKNMVNESLGAICNAHVVHADSSEYGALDEKCIKLAELA 952
Score = 144 bits (363), Expect(2) = 4e-85
Identities = 67/92 (72%), Positives = 81/92 (88%)
Frame = +1
Query: 1 DSMVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQL 180
++M+ RLN+MLE+TD AF++LTSSC +QGNTAA+MLSAGFKPQ+EPHL+GML S+R AQL
Sbjct: 691 ETMISRLNQMLEDTDTAFDVLTSSCTDQGNTAAIMLSAGFKPQTEPHLRGMLTSIRVAQL 750
Query: 181 EGLFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
L + RIFVPSGR +MGCLDELGVLEHGQC
Sbjct: 751 GDLRERARIFVPSGRWLMGCLDELGVLEHGQC 782
>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
protein [Populus trichocarpa]
Length = 1198
Score = 201 bits (511), Expect(2) = 2e-84
Identities = 110/184 (59%), Positives = 124/184 (67%), Gaps = 18/184 (9%)
Frame = +2
Query: 251 LGYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILE 430
LG L + VS+ LEN F+KHG FSE K+N+QV+KG V+IAKNPCLHP DIRILE
Sbjct: 773 LGVLEQGQCFIQVSNSYLENCFVKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILE 832
Query: 431 AVDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFYD 610
AVD P LHHL DCLVFPQKG+RPH EASGSDLDGD YFVTWDENLIPPS RS PM YD
Sbjct: 833 AVDAPGLHHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYD 892
Query: 611 CPS----------QEIV-----TPSQ*SVDPSCNAHVVLADQSEKGALDGDC---KKLAA 736
Q+IV + ++ CNAHVV AD SE GALD C +LAA
Sbjct: 893 AAEAKQLTRPVNHQDIVEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAA 952
Query: 737 TAVN 748
TAV+
Sbjct: 953 TAVD 956
Score = 139 bits (349), Expect(2) = 2e-84
Identities = 67/90 (74%), Positives = 78/90 (86%)
Frame = +1
Query: 7 MVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQLEG 186
MV +LN+ML ++DVAF++LT+SCAEQGN AA+MLSAGFKPQ EPHL+GML +RAAQL G
Sbjct: 692 MVSKLNQMLVDSDVAFDVLTASCAEQGNVAAIMLSAGFKPQKEPHLRGMLTCVRAAQLWG 751
Query: 187 LFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
L K RIFVPSGR +MGCLDELGVLE GQC
Sbjct: 752 LREKARIFVPSGRWLMGCLDELGVLEQGQC 781
>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
Length = 1197
Score = 205 bits (521), Expect(2) = 9e-84
Identities = 110/180 (61%), Positives = 126/180 (70%), Gaps = 16/180 (8%)
Frame = +2
Query: 251 LGYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILE 430
LG L + VSSPSLEN F+KHG FS+ K+N+QV+KGLV+IAKNPCLHP D+RILE
Sbjct: 773 LGELEQGQCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILE 832
Query: 431 AVDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFYD 610
AVD P LHHL DCLVFPQKGDRPH+ EASGSDLDGD YFVTWDENLIPPS +S PM Y+
Sbjct: 833 AVDVPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYE 892
Query: 611 CPSQ-----------EIV-----TPSQ*SVDPSCNAHVVLADQSEKGALDGDCKKLAATA 742
P++ +I+ Q S+ CNAHVV AD SE GALD C KLA A
Sbjct: 893 -PAEVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELA 951
Score = 132 bits (333), Expect(2) = 9e-84
Identities = 64/90 (71%), Positives = 77/90 (85%)
Frame = +1
Query: 7 MVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQLEG 186
M+ LN+ML ++DVAF+++T+SCAE GNTAA+MLSAGFKPQSEPHL+GML S+RA+QL
Sbjct: 692 MISGLNKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGD 751
Query: 187 LFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
L K RIFVPSGR +MGCLDELG LE GQC
Sbjct: 752 LRNKARIFVPSGRWLMGCLDELGELEQGQC 781
>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp.
vesca]
Length = 1197
Score = 196 bits (499), Expect(2) = 1e-83
Identities = 103/179 (57%), Positives = 117/179 (65%), Gaps = 15/179 (8%)
Frame = +2
Query: 251 LGYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILE 430
LG L + VS+PSLEN F KHG F + +N+QVIKG V++AKNPCLHP DIRILE
Sbjct: 773 LGVLEQGQCFVQVSTPSLENCFAKHGSRFDQTDKNLQVIKGFVVVAKNPCLHPGDIRILE 832
Query: 431 AVDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFYD 610
AVD P LHHL DCLVFPQKG RPHT EASGSDLDGD YFVTWDENLIPP +S PM Y+
Sbjct: 833 AVDAPGLHHLHDCLVFPQKGHRPHTDEASGSDLDGDLYFVTWDENLIPPRKKSWQPMEYE 892
Query: 611 CPSQEIVTPSQ*SVD---------------PSCNAHVVLADQSEKGALDGDCKKLAATA 742
++ S S D CNAHVV +D+SE GA D +C KLA A
Sbjct: 893 PAEAKLSGRSVTSQDLIEFFVRNMVNENLGAICNAHVVHSDRSEYGAFDENCLKLAELA 951
Score = 140 bits (353), Expect(2) = 1e-83
Identities = 67/92 (72%), Positives = 82/92 (89%)
Frame = +1
Query: 1 DSMVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQL 180
++MV +L +ML +TDVAF++LT+SCAEQGN+AA+MLSAGFKPQ+EPHL+GML ++AAQL
Sbjct: 690 ETMVSKLKQMLVDTDVAFDVLTASCAEQGNSAAIMLSAGFKPQTEPHLRGMLTCIQAAQL 749
Query: 181 EGLFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
GL KTRIFVPSGR +MGCLDELGVLE GQC
Sbjct: 750 WGLREKTRIFVPSGRWLMGCLDELGVLEQGQC 781
>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
Length = 1197
Score = 196 bits (498), Expect(2) = 1e-83
Identities = 109/184 (59%), Positives = 124/184 (67%), Gaps = 18/184 (9%)
Frame = +2
Query: 251 LGYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILE 430
LG L + VSSPSLEN FLKHG FS A++N++VIKG+V IAKNPCLHP D+RILE
Sbjct: 773 LGVLEQGQCFIQVSSPSLENCFLKHGSRFS-AQKNLKVIKGIVAIAKNPCLHPGDVRILE 831
Query: 431 AVDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFYD 610
AVD P L HLVDCLVFPQKGDRPH+ EASGSDLDGD YFVTW+E LIPPS +S PM YD
Sbjct: 832 AVDAPGLEHLVDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWEETLIPPSKQSWPPMQYD 891
Query: 611 CPSQEIVTPSQ*SVD---------------PSCNAHVVLADQSEKGALDGDCKKL---AA 736
+ + S+D CNAHVV AD+SE GALD C L AA
Sbjct: 892 SAEAKALAREVTSLDIIDFFTKNMVNENLGAICNAHVVHADRSEYGALDEACLDLAERAA 951
Query: 737 TAVN 748
TAV+
Sbjct: 952 TAVD 955
Score = 140 bits (354), Expect(2) = 1e-83
Identities = 67/92 (72%), Positives = 80/92 (86%)
Frame = +1
Query: 1 DSMVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQL 180
+SM+ +LN+ML +TDVAF++L +SCAEQGNTAA+MLSAGFKPQ+EPHL+GML +RAAQ
Sbjct: 690 ESMISKLNQMLTDTDVAFDVLIASCAEQGNTAAIMLSAGFKPQTEPHLQGMLTCIRAAQF 749
Query: 181 EGLFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
GL K RIFVPSGR +MGCLDELGVLE GQC
Sbjct: 750 WGLREKARIFVPSGRWLMGCLDELGVLEQGQC 781
>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
Length = 1035
Score = 196 bits (498), Expect(2) = 1e-83
Identities = 109/184 (59%), Positives = 124/184 (67%), Gaps = 18/184 (9%)
Frame = +2
Query: 251 LGYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILE 430
LG L + VSSPSLEN FLKHG FS A++N++VIKG+V IAKNPCLHP D+RILE
Sbjct: 611 LGVLEQGQCFIQVSSPSLENCFLKHGSRFS-AQKNLKVIKGIVAIAKNPCLHPGDVRILE 669
Query: 431 AVDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFYD 610
AVD P L HLVDCLVFPQKGDRPH+ EASGSDLDGD YFVTW+E LIPPS +S PM YD
Sbjct: 670 AVDAPGLEHLVDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWEETLIPPSKQSWPPMQYD 729
Query: 611 CPSQEIVTPSQ*SVD---------------PSCNAHVVLADQSEKGALDGDCKKL---AA 736
+ + S+D CNAHVV AD+SE GALD C L AA
Sbjct: 730 SAEAKALAREVTSLDIIDFFTKNMVNENLGAICNAHVVHADRSEYGALDEACLDLAERAA 789
Query: 737 TAVN 748
TAV+
Sbjct: 790 TAVD 793
Score = 140 bits (354), Expect(2) = 1e-83
Identities = 67/92 (72%), Positives = 80/92 (86%)
Frame = +1
Query: 1 DSMVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQL 180
+SM+ +LN+ML +TDVAF++L +SCAEQGNTAA+MLSAGFKPQ+EPHL+GML +RAAQ
Sbjct: 528 ESMISKLNQMLTDTDVAFDVLIASCAEQGNTAAIMLSAGFKPQTEPHLQGMLTCIRAAQF 587
Query: 181 EGLFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
GL K RIFVPSGR +MGCLDELGVLE GQC
Sbjct: 588 WGLREKARIFVPSGRWLMGCLDELGVLEQGQC 619
>ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
gi|462422376|gb|EMJ26639.1| hypothetical protein
PRUPE_ppa000422mg [Prunus persica]
Length = 1196
Score = 204 bits (518), Expect(2) = 2e-83
Identities = 107/179 (59%), Positives = 124/179 (69%), Gaps = 15/179 (8%)
Frame = +2
Query: 251 LGYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILE 430
LG L + VS+P LE+ F KHG F++ +RN+QVIKG V+IAKNPCLHP DIRILE
Sbjct: 771 LGVLEQGQCFVQVSTPLLESCFAKHGSSFAQIERNLQVIKGHVVIAKNPCLHPGDIRILE 830
Query: 431 AVDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFYD 610
AVD P LHHL DCLVFPQKGDRPHT EASGSDLDGD YFVTWDENLIPPS +S PM YD
Sbjct: 831 AVDAPGLHHLYDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKKSWMPMQYD 890
Query: 611 ----------CPSQEIV-----TPSQ*SVDPSCNAHVVLADQSEKGALDGDCKKLAATA 742
Q+I+ + ++ P CNAHVV AD+S+ GALD +C KLA A
Sbjct: 891 PAEAKLQGRPVTQQDIIDFFVKNMTNENLGPICNAHVVHADRSDYGALDVNCLKLAELA 949
Score = 132 bits (333), Expect(2) = 2e-83
Identities = 65/92 (70%), Positives = 78/92 (84%)
Frame = +1
Query: 1 DSMVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQL 180
+ MV +LN+ML +TDVAF++LT+SCAEQGN AA+MLSAGFKPQ+EPHL+GML ++AAQL
Sbjct: 688 EKMVLKLNQMLVDTDVAFDVLTASCAEQGNAAAIMLSAGFKPQTEPHLRGMLTCIQAAQL 747
Query: 181 EGLFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
GL K RIFV SGR +MG LDELGVLE GQC
Sbjct: 748 WGLREKARIFVHSGRWLMGVLDELGVLEQGQC 779
>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
Length = 1197
Score = 205 bits (521), Expect(2) = 3e-83
Identities = 110/180 (61%), Positives = 126/180 (70%), Gaps = 16/180 (8%)
Frame = +2
Query: 251 LGYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILE 430
LG L + VSSPSLEN F+KHG FS+ K+N+QV+KGLV+IAKNPCLHP D+RILE
Sbjct: 773 LGELEQGQCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILE 832
Query: 431 AVDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFYD 610
AVD P LHHL DCLVFPQKGDRPH+ EASGSDLDGD YFVTWDENLIPPS +S PM Y+
Sbjct: 833 AVDVPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYE 892
Query: 611 CPSQ-----------EIV-----TPSQ*SVDPSCNAHVVLADQSEKGALDGDCKKLAATA 742
P++ +I+ Q S+ CNAHVV AD SE GALD C KLA A
Sbjct: 893 -PAEVKQMGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELA 951
Score = 130 bits (328), Expect(2) = 3e-83
Identities = 63/90 (70%), Positives = 77/90 (85%)
Frame = +1
Query: 7 MVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQLEG 186
M+ L++ML ++DVAF+++T+SCAE GNTAA+MLSAGFKPQSEPHL+GML S+RA+QL
Sbjct: 692 MISGLDKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGD 751
Query: 187 LFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
L K RIFVPSGR +MGCLDELG LE GQC
Sbjct: 752 LRNKARIFVPSGRWLMGCLDELGELEQGQC 781
>gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
Length = 1194
Score = 202 bits (514), Expect(2) = 4e-83
Identities = 110/180 (61%), Positives = 122/180 (67%), Gaps = 16/180 (8%)
Frame = +2
Query: 251 LGYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILE 430
LG L + VS+PSLEN F KHG FSE K N++VIKG V+IAKNPCLHP DIRILE
Sbjct: 769 LGVLEQGQCFIQVSTPSLENCFSKHGSRFSETKNNLEVIKGFVVIAKNPCLHPGDIRILE 828
Query: 431 AVDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFYD 610
AVD P LHHL DCLVFPQKGDRPH EASGSDLDGD YFVTWDENLIPPS +S +PM YD
Sbjct: 829 AVDVPGLHHLYDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKKSWNPMQYD 888
Query: 611 CPSQEIVTP------------SQ*SVDPS----CNAHVVLADQSEKGALDGDCKKLAATA 742
P++ P S+ V+ S CNAHVV AD S+ GALD C LA A
Sbjct: 889 -PAKPRTLPRDVTQKDIIDFFSRNMVNESLGAICNAHVVHADLSDYGALDEKCLSLAELA 947
Score = 133 bits (334), Expect(2) = 4e-83
Identities = 64/92 (69%), Positives = 76/92 (82%)
Frame = +1
Query: 1 DSMVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQL 180
++M+ +LN+ML + DVAF +LT+SC EQGN A+MLSAGFKPQSEPHL+GML +RAAQL
Sbjct: 686 ETMLFKLNQMLTDADVAFNVLTASCPEQGNVGAIMLSAGFKPQSEPHLQGMLTCIRAAQL 745
Query: 181 EGLFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
GL K RIFVP GR +MGCLDELGVLE GQC
Sbjct: 746 WGLREKARIFVPLGRWLMGCLDELGVLEQGQC 777
>gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya]
Length = 1195
Score = 202 bits (513), Expect(2) = 7e-83
Identities = 106/184 (57%), Positives = 125/184 (67%), Gaps = 18/184 (9%)
Frame = +2
Query: 251 LGYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILE 430
L L + VS PSL+N F KHG FSE +RN++V+KG V+IAKNPCLHP DIRILE
Sbjct: 774 LAVLEQGQCFIQVSGPSLQNCFSKHGSRFSEIQRNLEVVKGFVVIAKNPCLHPGDIRILE 833
Query: 431 AVDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFYD 610
AVD P+LHHL DCLVFPQKGDRPHT EASGSDLDGD YFVTWDENL+PPS RS +PM Y+
Sbjct: 834 AVDAPDLHHLCDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLVPPSKRSWTPMDYE 893
Query: 611 CPSQEIVTPS---------------Q*SVDPSCNAHVVLADQSEKGALDGDC---KKLAA 736
+ +T ++ CNAHVV AD+SE GALD +C +LAA
Sbjct: 894 PADTKTLTHPVSHQDIIGFFAKNMVHENLGAICNAHVVHADRSEYGALDENCILLAELAA 953
Query: 737 TAVN 748
AV+
Sbjct: 954 IAVD 957
Score = 132 bits (333), Expect(2) = 7e-83
Identities = 63/92 (68%), Positives = 79/92 (85%)
Frame = +1
Query: 1 DSMVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQL 180
+SM+ +L++M+E+ DVAFE+L +SC+EQGN+AA+MLSAGF P +EPHL+GML S+RAAQL
Sbjct: 691 ESMIFKLHKMVEDPDVAFEVLLASCSEQGNSAAIMLSAGFNPLTEPHLRGMLASIRAAQL 750
Query: 181 EGLFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
GL K RIFVPSGR +MGCLDEL VLE GQC
Sbjct: 751 WGLREKARIFVPSGRWLMGCLDELAVLEQGQC 782
>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 202 bits (513), Expect(2) = 2e-82
Identities = 109/180 (60%), Positives = 125/180 (69%), Gaps = 16/180 (8%)
Frame = +2
Query: 251 LGYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILE 430
LG L + VSSPSLEN F+KHG FS+ K+N+QV+KGLV+IAKNPCLHP D+RILE
Sbjct: 773 LGELEQGQCFIQVSSPSLENCFVKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILE 832
Query: 431 AVDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFYD 610
AVD P L HL DCLVFPQKGDRPH+ EASGSDLDGD YFVTWDENLIPPS +S PM Y+
Sbjct: 833 AVDVPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYE 892
Query: 611 CPSQ-----------EIV-----TPSQ*SVDPSCNAHVVLADQSEKGALDGDCKKLAATA 742
P++ +I+ Q S+ CNAHVV AD SE GALD C KLA A
Sbjct: 893 -PAEVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELA 951
Score = 131 bits (329), Expect(2) = 2e-82
Identities = 63/90 (70%), Positives = 77/90 (85%)
Frame = +1
Query: 7 MVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQLEG 186
M+ L++ML ++DVAF+++T+SCAE GNTAA+MLSAGFKPQSEPHL+GML S+RA+QL
Sbjct: 692 MISGLDKMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPHLRGMLSSIRASQLGD 751
Query: 187 LFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
L K RIFVPSGR +MGCLDELG LE GQC
Sbjct: 752 LRNKARIFVPSGRWLMGCLDELGELEQGQC 781
>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 202 bits (513), Expect(2) = 2e-82
Identities = 109/180 (60%), Positives = 125/180 (69%), Gaps = 16/180 (8%)
Frame = +2
Query: 251 LGYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILE 430
LG L + VSSPSLEN F+KHG FS+ K+N+QV+KGLV+IAKNPCLHP D+RILE
Sbjct: 773 LGELEQGQCFIQVSSPSLENCFVKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILE 832
Query: 431 AVDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFYD 610
AVD P L HL DCLVFPQKGDRPH+ EASGSDLDGD YFVTWDENLIPPS +S PM Y+
Sbjct: 833 AVDVPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYE 892
Query: 611 CPSQ-----------EIV-----TPSQ*SVDPSCNAHVVLADQSEKGALDGDCKKLAATA 742
P++ +I+ Q S+ CNAHVV AD SE GALD C KLA A
Sbjct: 893 -PAEVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELA 951
Score = 131 bits (329), Expect(2) = 2e-82
Identities = 63/90 (70%), Positives = 77/90 (85%)
Frame = +1
Query: 7 MVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQLEG 186
M+ L++ML ++DVAF+++T+SCAE GNTAA+MLSAGFKPQSEPHL+GML S+RA+QL
Sbjct: 692 MISGLDKMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPHLRGMLSSIRASQLGD 751
Query: 187 LFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
L K RIFVPSGR +MGCLDELG LE GQC
Sbjct: 752 LRNKARIFVPSGRWLMGCLDELGELEQGQC 781
>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
Length = 1197
Score = 201 bits (512), Expect(2) = 2e-82
Identities = 108/180 (60%), Positives = 125/180 (69%), Gaps = 16/180 (8%)
Frame = +2
Query: 251 LGYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILE 430
LG L + VSSPSLEN F+KHG FS+ K+N+QV+KGLV+IAKNPCLHP D+RILE
Sbjct: 773 LGELEQGQCFIQVSSPSLENCFVKHGSKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILE 832
Query: 431 AVDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFYD 610
AVD P L HL DCLVFPQKGDRPH+ EASGSDLDGD YFVTWDEN+IPPS +S PM Y+
Sbjct: 833 AVDVPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENIIPPSKKSWIPMNYE 892
Query: 611 CPSQ-----------EIV-----TPSQ*SVDPSCNAHVVLADQSEKGALDGDCKKLAATA 742
P++ +I+ Q S+ CNAHVV AD SE GALD C KLA A
Sbjct: 893 -PAEVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELA 951
Score = 131 bits (330), Expect(2) = 2e-82
Identities = 63/90 (70%), Positives = 77/90 (85%)
Frame = +1
Query: 7 MVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQLEG 186
M+ L++ML ++DVAF+++T+SCAE GNTAA+MLSAGFKPQSEPHL+GML S+RA+QL
Sbjct: 692 MIAGLDKMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPHLRGMLSSIRASQLGD 751
Query: 187 LFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
L K RIFVPSGR +MGCLDELG LE GQC
Sbjct: 752 LRNKARIFVPSGRWLMGCLDELGELEQGQC 781
>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
6 [Solanum lycopersicum]
Length = 1197
Score = 203 bits (516), Expect(2) = 4e-82
Identities = 108/179 (60%), Positives = 120/179 (67%), Gaps = 15/179 (8%)
Frame = +2
Query: 251 LGYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILE 430
LG L + VSSPSLE F+KHG FSE K+N+QV+KGLV+IAKNPCLHP D+RILE
Sbjct: 773 LGELEQGQCFIQVSSPSLETCFVKHGPEFSEIKKNLQVVKGLVVIAKNPCLHPGDVRILE 832
Query: 431 AVDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFY- 607
AVD P LHHL DCLVFPQKGDRPH+ EASGSDLDGD YFVTWDENLIPPS +S PM Y
Sbjct: 833 AVDVPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMAYA 892
Query: 608 --------------DCPSQEIVTPSQ*SVDPSCNAHVVLADQSEKGALDGDCKKLAATA 742
D + Q S+ CNAHVV AD SE GA+D C KLA A
Sbjct: 893 PAEAKQLGRQVQHTDIIDFFLKNMVQESLGEICNAHVVHADLSEFGAMDEKCLKLAELA 951
Score = 129 bits (324), Expect(2) = 4e-82
Identities = 62/90 (68%), Positives = 78/90 (86%)
Frame = +1
Query: 7 MVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQLEG 186
M+ +L+++L ++DVAF+++T+SCAE GNTAA+MLSAGFKPQSEPHL+GML S+RAAQL
Sbjct: 692 MLSKLDKILVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGMLASIRAAQLGD 751
Query: 187 LFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
L KTR+FV SGR +MGCLDELG LE GQC
Sbjct: 752 LRNKTRMFVTSGRWLMGCLDELGELEQGQC 781
>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 201 bits (512), Expect(2) = 4e-82
Identities = 109/180 (60%), Positives = 125/180 (69%), Gaps = 16/180 (8%)
Frame = +2
Query: 251 LGYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILE 430
LG L + VSSPSLEN F+KHG FS+ K+N+QV+KGLV+IAKNPCLHP D+RILE
Sbjct: 773 LGELEQGQCFIQVSSPSLENCFVKHGPKFSDIKQNLQVVKGLVVIAKNPCLHPGDVRILE 832
Query: 431 AVDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFYD 610
AVD P L HL DCLVFPQKGDRPH+ EASGSDLDGD YFVTWDENLIPPS +S PM Y+
Sbjct: 833 AVDVPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYE 892
Query: 611 CPSQ-----------EIV-----TPSQ*SVDPSCNAHVVLADQSEKGALDGDCKKLAATA 742
P++ +I+ Q S+ CNAHVV AD SE GALD C KLA A
Sbjct: 893 -PAEVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELA 951
Score = 130 bits (328), Expect(2) = 4e-82
Identities = 63/90 (70%), Positives = 77/90 (85%)
Frame = +1
Query: 7 MVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQLEG 186
M+ L++ML ++DVAF+++T+SCAE GNTAA+MLSAGFKPQSEPHL+GML S+RA+QL
Sbjct: 692 MISGLDKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGD 751
Query: 187 LFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
L K RIFVPSGR +MGCLDELG LE GQC
Sbjct: 752 LRNKARIFVPSGRWLMGCLDELGELEQGQC 781
>gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [Lotus japonicus]
Length = 1201
Score = 200 bits (508), Expect(2) = 8e-82
Identities = 106/179 (59%), Positives = 120/179 (67%), Gaps = 15/179 (8%)
Frame = +2
Query: 251 LGYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILE 430
LG L + VS+PSLEN F KHG FSE K ++QV+KG V+IAKNPCLHP D+RILE
Sbjct: 772 LGVLEQGQCFVQVSTPSLENCFSKHGSRFSETK-SLQVVKGYVVIAKNPCLHPGDVRILE 830
Query: 431 AVDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFYD 610
A+D+P+LHHL DCLVFPQKGDRPHT EASGSDLDGD YFVTWD+NLIPPS RS PM YD
Sbjct: 831 AIDSPDLHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKRSWIPMEYD 890
Query: 611 CPSQEIVTPSQ*SVD---------------PSCNAHVVLADQSEKGALDGDCKKLAATA 742
++ T S D CNAHVV AD S+ GALD C LA A
Sbjct: 891 AQESKLQTRKVTSRDIIDFFVRNMVNENLGAICNAHVVHADSSDYGALDEKCIILAEKA 949
Score = 131 bits (329), Expect(2) = 8e-82
Identities = 64/90 (71%), Positives = 74/90 (82%)
Frame = +1
Query: 7 MVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQLEG 186
M+ +LN+ML N DVAF++LT SCAE GN AA+MLS GF PQ+EPHLKGML S+RAAQL G
Sbjct: 691 MISKLNQMLVNADVAFDVLTKSCAEHGNAAAIMLSCGFSPQTEPHLKGMLTSIRAAQLWG 750
Query: 187 LFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
L K+RIFV SGR +MG LDELGVLE GQC
Sbjct: 751 LREKSRIFVSSGRWLMGVLDELGVLEQGQC 780
>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
tuberosum]
Length = 1198
Score = 201 bits (511), Expect(2) = 1e-81
Identities = 109/170 (64%), Positives = 119/170 (70%), Gaps = 18/170 (10%)
Frame = +2
Query: 287 VSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILEAVDTPELHHLVD 466
VSSPSLE F+KHG FSE K+N+QVIKGLV+IAKNPCLHP D+RILEAVD P LHHL D
Sbjct: 786 VSSPSLETCFVKHGPKFSEIKKNLQVIKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYD 845
Query: 467 CLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFY------------- 607
CLVFPQKGDRPH+ EASGSDLDGD YFVTWDENLIPPS +S PM Y
Sbjct: 846 CLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMDYAPAEAKQLGRQVQ 905
Query: 608 -----DCPSQEIVTPSQ*SVDPSCNAHVVLADQSEKGALDGDCKKLAATA 742
D S+ +V Q S+ CNAHVV AD SE GALD C KLA A
Sbjct: 906 HTDIIDFFSKNMV---QESLGEICNAHVVHADLSEFGALDEKCLKLAELA 952
Score = 129 bits (324), Expect(2) = 1e-81
Identities = 62/90 (68%), Positives = 78/90 (86%)
Frame = +1
Query: 7 MVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQLEG 186
M+ +L+++L ++DVAF+++T+SCAE GNTAA+MLSAGFKPQSEPHL+GML S+RAAQL
Sbjct: 693 MLSKLDKILVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGMLASIRAAQLGD 752
Query: 187 LFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
L KTR+FVPSGR +MGCLDEL LE GQC
Sbjct: 753 LRNKTRMFVPSGRWLMGCLDELRKLEQGQC 782
>ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis thaliana]
gi|75337188|sp|Q9SG02.1|RDR6_ARATH RecName:
Full=RNA-dependent RNA polymerase 6; Short=AtRDRP6;
AltName: Full=Protein SILENCING DEFECTIVE 1; AltName:
Full=Protein SUPPRESSOR OF GENE SILENCING 2; AltName:
Full=RNA-directed RNA polymerase 6
gi|12324444|gb|AAG52184.1|AC012329_11 putative
RNA-directed RNA polymerase; 73997-69985 [Arabidopsis
thaliana] gi|6899955|emb|CAB71285.1| RNA-directed RNA
polymerase-like protein [Arabidopsis thaliana]
gi|8164028|gb|AAF73959.1| SGS2 [Arabidopsis thaliana]
gi|332645029|gb|AEE78550.1| RNA-dependent RNA polymerase
6 [Arabidopsis thaliana]
Length = 1196
Score = 190 bits (482), Expect(2) = 1e-81
Identities = 98/183 (53%), Positives = 121/183 (66%), Gaps = 18/183 (9%)
Frame = +2
Query: 254 GYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILEA 433
G L + VS PS+EN F KHG F E K +++V+KG V IAKNPCLHP D+RILEA
Sbjct: 773 GILEHGQCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEA 832
Query: 434 VDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFYDC 613
VD P+LHH+ DCL+FPQKGDRPHT EASGSDLDGD YFV WD+ LIPP+ +S+ M YD
Sbjct: 833 VDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDA 892
Query: 614 PS----------QEIV-----TPSQ*SVDPSCNAHVVLADQSEKGALDGDC---KKLAAT 739
Q+I+ + + CNAHVV AD+SE GA+D +C +LAAT
Sbjct: 893 AEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAAT 952
Query: 740 AVN 748
AV+
Sbjct: 953 AVD 955
Score = 140 bits (353), Expect(2) = 1e-81
Identities = 66/92 (71%), Positives = 82/92 (89%)
Frame = +1
Query: 1 DSMVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQL 180
+SM+ +LN +L++TDVAFE+LT+SCAEQGNTAA+MLSAGFKP++EPHL+GML S+R AQL
Sbjct: 689 ESMLYKLNRILDDTDVAFEVLTASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQL 748
Query: 181 EGLFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
GL K+RIFV SGR +MGCLDE G+LEHGQC
Sbjct: 749 WGLREKSRIFVTSGRWLMGCLDEAGILEHGQC 780
>ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Capsella rubella]
gi|482559225|gb|EOA23416.1| hypothetical protein
CARUB_v10016597mg [Capsella rubella]
Length = 1197
Score = 192 bits (488), Expect(2) = 2e-81
Identities = 99/183 (54%), Positives = 121/183 (66%), Gaps = 18/183 (9%)
Frame = +2
Query: 254 GYLSMDNVYPLVSSPSLENYFLKHGK*FSEAKRNVQVIKGLVIIAKNPCLHPRDIRILEA 433
G L + VS PS++N F KHG F E K ++QV+KG V +AKNPCLHP D+RILEA
Sbjct: 773 GILEEGKCFIQVSKPSIKNCFSKHGSRFKETKTDLQVVKGYVAVAKNPCLHPGDVRILEA 832
Query: 434 VDTPELHHLVDCLVFPQKGDRPHTAEASGSDLDGDCYFVTWDENLIPPSNRSHSPMFYDC 613
VD P+LHH+ DCL+FPQKGDRPHT EASGSDLDGD YFV WD+ L+PPS +S M YD
Sbjct: 833 VDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLVPPSQKSFPAMHYDA 892
Query: 614 PS----------QEIV-----TPSQ*SVDPSCNAHVVLADQSEKGALDGDC---KKLAAT 739
Q+I+ + S+ CNAHVV AD+SE GA+D DC +LAAT
Sbjct: 893 AEAKSLGRAVNHQDIIDFFARNMANESLGTICNAHVVHADRSEYGAMDEDCLLLAELAAT 952
Query: 740 AVN 748
AV+
Sbjct: 953 AVD 955
Score = 137 bits (345), Expect(2) = 2e-81
Identities = 64/92 (69%), Positives = 81/92 (88%)
Frame = +1
Query: 1 DSMVCRLNEMLENTDVAFEILTSSCAEQGNTAAMMLSAGFKPQSEPHLKGMLCSMRAAQL 180
+SM+C+LN +L++TDVAFE+LT+SCAEQGNTAA+MLSAGFKP++EPHL+GML S+R AQL
Sbjct: 689 ESMLCKLNRILDDTDVAFEVLTASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQL 748
Query: 181 EGLFAKTRIFVPSGRLMMGCLDELGVLEHGQC 276
L K+RIFV SGR +MGCLDE G+LE G+C
Sbjct: 749 WDLREKSRIFVTSGRWLMGCLDEAGILEEGKC 780