BLASTX nr result
ID: Akebia27_contig00026372
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00026372
(397 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [A... 60 3e-07
gb|AFW84817.1| hypothetical protein ZEAMMB73_052663 [Zea mays] 59 5e-07
ref|XP_004970292.1| PREDICTED: DNA-directed RNA polymerases I, I... 59 7e-07
ref|NP_001141164.1| uncharacterized protein LOC100273250 [Zea ma... 59 7e-07
gb|ACF80672.1| unknown [Zea mays] 59 7e-07
ref|XP_006644871.1| PREDICTED: DNA-directed RNA polymerases II a... 59 9e-07
ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Caps... 59 9e-07
emb|CBI28035.3| unnamed protein product [Vitis vinifera] 59 9e-07
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I... 59 9e-07
gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus... 58 1e-06
ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutr... 58 1e-06
ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis ... 58 1e-06
ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrat... 58 1e-06
ref|XP_003564430.1| PREDICTED: DNA-directed RNA polymerases I, I... 58 2e-06
ref|XP_002514265.1| DNA-directed RNA polymerase II, putative [Ri... 58 2e-06
gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subun... 57 2e-06
ref|XP_004307246.1| PREDICTED: DNA-directed RNA polymerases I, I... 57 3e-06
ref|NP_001044564.1| Os01g0805800 [Oryza sativa Japonica Group] g... 57 3e-06
ref|XP_006849836.1| hypothetical protein AMTR_s00022p00032270 [A... 57 3e-06
ref|XP_004301698.1| PREDICTED: DNA-directed RNA polymerases I, I... 57 3e-06
>ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [Amborella trichopoda]
gi|548863022|gb|ERN20377.1| hypothetical protein
AMTR_s00068p00034280 [Amborella trichopoda]
Length = 206
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKETLVSAEQL 110
KEHVLVPEHQVLT+EEKKTLLERYTLKET + Q+
Sbjct: 136 KEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQI 171
>gb|AFW84817.1| hypothetical protein ZEAMMB73_052663 [Zea mays]
Length = 238
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKETLV 95
KEHVLVPEHQVLT EEKKTLLERYTLKET V
Sbjct: 140 KEHVLVPEHQVLTNEEKKTLLERYTLKETQV 170
>ref|XP_004970292.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Setaria italica]
Length = 210
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKETLVSAEQL 110
KEHVLVPEHQVLT EEKKTLLERYTLKET + Q+
Sbjct: 140 KEHVLVPEHQVLTNEEKKTLLERYTLKETQLPRIQI 175
>ref|NP_001141164.1| uncharacterized protein LOC100273250 [Zea mays]
gi|226533456|ref|NP_001152590.1| DNA-directed RNA
polymerases II 24 kDa polypeptide [Zea mays]
gi|194703030|gb|ACF85599.1| unknown [Zea mays]
gi|195657875|gb|ACG48405.1| DNA-directed RNA polymerases
II 24 kDa polypeptide [Zea mays]
gi|413952167|gb|AFW84816.1| DNA-directed RNA polymerase
II polypeptide [Zea mays]
Length = 210
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKETLVSAEQL 110
KEHVLVPEHQVLT EEKKTLLERYTLKET + Q+
Sbjct: 140 KEHVLVPEHQVLTNEEKKTLLERYTLKETQLPRIQI 175
>gb|ACF80672.1| unknown [Zea mays]
Length = 127
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKETLVSAEQL 110
KEHVLVPEHQVLT EEKKTLLERYTLKET + Q+
Sbjct: 57 KEHVLVPEHQVLTNEEKKTLLERYTLKETQLPRIQI 92
>ref|XP_006644871.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Oryza brachyantha]
Length = 210
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKETLVSAEQL 110
KEHVL+PEHQVLT EEKKTLLERYTLKET + Q+
Sbjct: 140 KEHVLIPEHQVLTNEEKKTLLERYTLKETQLPRIQI 175
>ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Capsella rubella]
gi|482567281|gb|EOA31470.1| hypothetical protein
CARUB_v10014656mg [Capsella rubella]
Length = 205
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKET 89
KEHVLVPEHQVLT+EEKKTLLERYT+KET
Sbjct: 135 KEHVLVPEHQVLTSEEKKTLLERYTVKET 163
>emb|CBI28035.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKET 89
KEHVLVPEHQVLT+EEKKTLLERYT+KET
Sbjct: 116 KEHVLVPEHQVLTSEEKKTLLERYTVKET 144
>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1 isoform 1 [Vitis vinifera]
gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1 isoform 2
[Vitis vinifera]
Length = 206
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKET 89
KEHVLVPEHQVLT+EEKKTLLERYT+KET
Sbjct: 136 KEHVLVPEHQVLTSEEKKTLLERYTVKET 164
>gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus guttatus]
Length = 206
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKETLVSAEQL 110
KEHVLVPEHQVLT EEKKTLLERYT+KET + Q+
Sbjct: 136 KEHVLVPEHQVLTPEEKKTLLERYTVKETQLPRIQI 171
>ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutrema salsugineum]
gi|557107329|gb|ESQ47636.1| hypothetical protein
EUTSA_v10021534mg [Eutrema salsugineum]
Length = 206
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKET 89
KEHVLVPEHQVLT EEKKTLLERYT+KET
Sbjct: 136 KEHVLVPEHQVLTTEEKKTLLERYTVKET 164
>ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis thaliana]
gi|75275037|sp|O81098.1|RPB5A_ARATH RecName:
Full=DNA-directed RNA polymerases II and IV subunit 5A;
Short=RPB5a; AltName: Full=DNA-directed RNA polymerase
II subunit E; AltName: Full=RNA polymerase I, II and III
24.3 kDa subunit; Short=AtRPB24.3
gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
II and III 24.3 kDa subunit [Arabidopsis thaliana]
gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
[Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
polymerase I, II and III 24.3 kDa subunit [Arabidopsis
thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
II and III 24.3 kDa subunit [Arabidopsis thaliana]
gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana]
gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana]
gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
NRPB5 [Arabidopsis thaliana]
Length = 205
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKET 89
KEHVLVPEHQVLT EEKKTLLERYT+KET
Sbjct: 135 KEHVLVPEHQVLTTEEKKTLLERYTVKET 163
>ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrata]
gi|297331338|gb|EFH61757.1| ATRPABC24.3 [Arabidopsis
lyrata subsp. lyrata]
Length = 205
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKET 89
KEHVLVPEHQVLT EEKKTLLERYT+KET
Sbjct: 135 KEHVLVPEHQVLTTEEKKTLLERYTVKET 163
>ref|XP_003564430.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Brachypodium distachyon]
Length = 210
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKETLVSAEQL 110
KEHVLVPEHQVLT +EKKTLLERYTLKET + Q+
Sbjct: 140 KEHVLVPEHQVLTNDEKKTLLERYTLKETQLPRIQI 175
>ref|XP_002514265.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223546721|gb|EEF48219.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 225
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKETLVSAEQL 110
KEHVLVPEHQVLT EEKKTLLERYT+KET + Q+
Sbjct: 155 KEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQI 190
>gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 253
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKET 89
KEHVLVPEHQVLT EEKKTLLERYT+KET
Sbjct: 136 KEHVLVPEHQVLTNEEKKTLLERYTVKET 164
>ref|XP_004307246.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Fragaria vesca subsp. vesca]
Length = 206
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKETLVSAEQL 110
KEHVLVPEH+VLT EEKKTLLERYT+KET + QL
Sbjct: 136 KEHVLVPEHRVLTNEEKKTLLERYTVKETQLPRIQL 171
>ref|NP_001044564.1| Os01g0805800 [Oryza sativa Japonica Group]
gi|55296830|dbj|BAD68174.1| putative DNA-directed RNA
polymerase II 23K chain [Oryza sativa Japonica Group]
gi|113534095|dbj|BAF06478.1| Os01g0805800 [Oryza sativa
Japonica Group] gi|215737136|dbj|BAG96065.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215765546|dbj|BAG87243.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218189238|gb|EEC71665.1| hypothetical protein
OsI_04128 [Oryza sativa Indica Group]
Length = 210
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKETLVSAEQL 110
KEHVLVPEHQVL EEKKTLLERYTLKET + Q+
Sbjct: 140 KEHVLVPEHQVLNNEEKKTLLERYTLKETQLPRIQI 175
>ref|XP_006849836.1| hypothetical protein AMTR_s00022p00032270 [Amborella trichopoda]
gi|548853434|gb|ERN11417.1| hypothetical protein
AMTR_s00022p00032270 [Amborella trichopoda]
Length = 240
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKET 89
KEHVLVPEHQVLT+EEKKTLLERYTL ET
Sbjct: 192 KEHVLVPEHQVLTSEEKKTLLERYTLIET 220
>ref|XP_004301698.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Fragaria vesca subsp. vesca]
Length = 206
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +3
Query: 3 KEHVLVPEHQVLTAEEKKTLLERYTLKETLVSAEQL 110
KEHVLVPEHQVLT EEKKTLL+RYT+KET + Q+
Sbjct: 136 KEHVLVPEHQVLTNEEKKTLLQRYTVKETQLPRMQV 171