BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00025539
         (917 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA73042.1| polyprotein [Ananas comosus]                          108   8e-46
emb|CAN61694.1| hypothetical protein VITISV_026655 [Vitis vinifera]   103   3e-43
emb|CAC44142.1| putative polyprotein [Cicer arietinum]                 99   2e-41
gb|AAT85127.1| putative polyprotein [Oryza sativa Japonica Group]     105   1e-40
gb|AAV59338.1| hypothetical protein [Oryza sativa Japonica Group]     103   1e-39
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e...   102   2e-39
gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subc...    98   2e-39
emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]                102   2e-39
gb|ABA97418.2| retrotransposon protein, putative, Ty3-gypsy subc...    97   3e-39
emb|CAH66707.1| OSIGBa0147J19.11 [Oryza sativa Indica Group]           97   8e-39
emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group] gi...    97   1e-38
gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subc...    96   1e-38
gb|AAD22158.1|AF061282_11 polyprotein [Sorghum bicolor]                97   1e-38
emb|CAJ86189.1| H0306F03.2 [Oryza sativa Indica Group]                 95   2e-38
emb|CAD41625.1| OSJNBa0091D06.10 [Oryza sativa Japonica Group]         94   2e-38
gb|AAX95143.1| retrotransposon protein, putative, Ty3-gypsy sub-...    99   4e-38
gb|AAN09868.1| putative polyprotein [Oryza sativa Japonica Group]      97   5e-38
gb|AAP52585.2| retrotransposon protein, putative, Ty3-gypsy subc...    97   5e-38
gb|ABA94234.1| retrotransposon protein, putative, Ty3-gypsy subc...    96   5e-38
gb|ABF93914.1| retrotransposon protein, putative, Ty3-gypsy subc...    95   7e-38

>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score =  108 bits (270), Expect(2) = 8e-46
 Identities = 65/167 (38%), Positives = 96/167 (57%), Gaps = 4/167 (2%)
 Frame = -3

Query: 906 YHPGKANVVADVLSRKSQGLIVG*TLRRWKMLDVMRTLIFVLEDKNLELMFYSLVAQSTL 727
           YHPGKANVVAD LSRKS   +    + + ++++ M+ L   +   +  +   +LV Q TL
Sbjct: 413 YHPGKANVVADALSRKSMENLAMHVVTQPRLIEQMKRLELEIVTPDTPMRLMTLVVQPTL 472

Query: 726 PRG*SKVRGMIRN*KEFELPEIE----DGKNQYEWSLSADGGLR*LGKLCILNNIQFKEY 559
                  R   +   + EL +I+    DG    +++L  DG +R  G++C+  +   KE 
Sbjct: 473 LD-----RIKEKQASDVELQKIKGKMVDGCTG-DFTLDGDGLMRFRGRICVPADSGIKED 526

Query: 558 FLSEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTCQ 418
            L EAHR+  AIHPG TK+Y+DLK  +WW G+ +DV E+V K LTCQ
Sbjct: 527 ILQEAHRAPYAIHPGGTKMYKDLKLLYWWPGIKKDVGEFVAKCLTCQ 573



 Score =  103 bits (256), Expect(2) = 8e-46
 Identities = 61/125 (48%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
 Frame = -2

Query: 415 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
           VK EH+ PAGKLQS  +   K +  +MDF++GLPR+  GH+ IWVIVDRLTK AHF+   
Sbjct: 575 VKAEHRVPAGKLQSLPIPVWKWEKITMDFVTGLPRSQAGHDAIWVIVDRLTKSAHFIPIH 634

Query: 235 E*TL*SKNH*ISCSEIVNF-----VILLYRDSRFTSQFWQSL*NASGTLLKFSIALHPQM 71
                 +   +   EIV        I+  RD+RF S FW+SL +A GT L FS A HPQ 
Sbjct: 635 TTWTGERLAQVYLDEIVRLHGVPTSIVSDRDTRFVSHFWRSLQDALGTRLDFSTAFHPQS 694

Query: 70  DGQYE 56
           DGQ E
Sbjct: 695 DGQSE 699


>emb|CAN61694.1| hypothetical protein VITISV_026655 [Vitis vinifera]
          Length = 1313

 Score =  103 bits (257), Expect(2) = 3e-43
 Identities = 63/128 (49%), Positives = 75/128 (58%), Gaps = 5/128 (3%)
 Frame = -2

Query: 415  VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
            VK EHQRPAG LQ   + E K D+ +MDF+ GLPRT    N +WVIVD LTK AHFL   
Sbjct: 940  VKAEHQRPAGLLQPLPIPEWKWDNITMDFVIGLPRTRSKKNGVWVIVDCLTKSAHFLAMK 999

Query: 235  E*TL*SKNH*ISCSEIVNF-----VILLYRDSRFTSQFWQSL*NASGTLLKFSIALHPQM 71
                 +    +   EIV        I+  RD +FTSQFWQSL  A GT L F+ A HPQ 
Sbjct: 1000 TTDSMNSLAKLYIQEIVRLHGILVSIVSDRDPKFTSQFWQSLQRALGTQLNFNTAFHPQT 1059

Query: 70   DGQYESIM 47
            DGQ E ++
Sbjct: 1060 DGQSERVI 1067



 Score = 99.8 bits (247), Expect(2) = 3e-43
 Identities = 58/165 (35%), Positives = 80/165 (48%)
 Frame = -3

Query: 912  LHYHPGKANVVADVLSRKSQGLIVG*TLRRWKMLDVMRTLIFVLEDKNLELMFYSLVAQS 733
            LHYHPGK N VAD LSRKS                  R     + D+ LE +   LVA  
Sbjct: 820  LHYHPGKXNXVADALSRKS------------------RIXEAQVHDEFLEKVKAXLVA-- 859

Query: 732  TLPRG*SKVRGMIRN*KEFELPEIEDGKNQYEWSLSADGGLR*LGKLCILNNIQFKEYFL 553
                                      G+    WS+  DG +R  G+LC+  +++ +   L
Sbjct: 860  --------------------------GEIDENWSMYEDGSVRFKGRLCVPKDVELRNELL 893

Query: 552  SEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTCQ 418
            ++AHR++  IHPG+TK+Y+DLK QFWW GM RD+A++V     CQ
Sbjct: 894  ADAHRAKYTIHPGNTKMYQDLKRQFWWSGMKRDIAQFVANFQICQ 938


>emb|CAC44142.1| putative polyprotein [Cicer arietinum]
          Length = 655

 Score = 98.6 bits (244), Expect(2) = 2e-41
 Identities = 62/165 (37%), Positives = 91/165 (55%)
 Frame = -3

Query: 912 LHYHPGKANVVADVLSRKSQGLIVG*TLRRWKMLDVMRTLIFVLEDKNLELMFYSLVAQS 733
           L YHPGKANVVAD LSR+S  +      R+ ++ +  R L   +E     L F  +   S
Sbjct: 214 LQYHPGKANVVADALSRRSVSVSSLIMARQQELWEAFRDLHLNVEFAPGILKFGMIKISS 273

Query: 732 TLPRG*SKVRGMIRN*KEFELPEIEDGKNQYEWSLSADGGLR*LGKLCILNNIQFKEYFL 553
            L    +  +  +   ++  L  I  GK   E+ + AD  LR  G++C+      ++  L
Sbjct: 274 GLLEDIANSQDDVLIQEKRNL--IVQGKTT-EFKIGADNVLRCNGRICVPEITAMRKTIL 330

Query: 552 SEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTCQ 418
            EAH+S+ +IHPG+TK+Y+DL+  +WW GM + VAEYV   LTCQ
Sbjct: 331 EEAHKSKLSIHPGATKMYQDLRQNYWWPGMKKHVAEYVSTCLTCQ 375



 Score = 98.2 bits (243), Expect(2) = 2e-41
 Identities = 61/124 (49%), Positives = 74/124 (59%), Gaps = 5/124 (4%)
 Frame = -2

Query: 412 KTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYLE 233
           K EHQRPAG LQ   + E K D  SMDF++GLP+T + ++ IWVIVDRLTK AHFL    
Sbjct: 378 KVEHQRPAGMLQPLDIPEWKWDSISMDFITGLPKTRRKNDSIWVIVDRLTKSAHFLPVRT 437

Query: 232 *TL*SKNH*ISCSEIVNF-----VILLYRDSRFTSQFWQSL*NASGTLLKFSIALHPQMD 68
                +   I  +EIV        I+  RD +FTS FW +L  A GT L+ S A HPQ D
Sbjct: 438 TYKVDQLTEIYIAEIVRLHGVPSSIVSDRDPKFTSHFWGALHEALGTKLRLSSAYHPQTD 497

Query: 67  GQYE 56
           GQ E
Sbjct: 498 GQTE 501


>gb|AAT85127.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1524

 Score =  105 bits (262), Expect(2) = 1e-40
 Identities = 67/151 (44%), Positives = 82/151 (54%), Gaps = 16/151 (10%)
 Frame = -2

Query: 415  VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
            VK EHQRPAG LQ   + E K +   MDF++GLPRT  GH+ IWV+VDRLTK+AHF+  +
Sbjct: 1142 VKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIP-V 1200

Query: 235  E*TL*SKN------H*ISCSEIVNFVILLYRDSRFTSQFWQSL*NASGTLLKFSIALHPQ 74
              T   K         I C   V   I+  R S+FTS+FWQ L    GT L FS A HPQ
Sbjct: 1201 HTTYSGKKLAGLYLARIMCLHGVPKKIVSDRGSQFTSKFWQKLQEELGTRLNFSTAYHPQ 1260

Query: 73   MDGQYESI----------MCFRFHGQWELTL 11
             DGQ E +              F G W+ +L
Sbjct: 1261 TDGQTERVNQILEDMLRACALDFGGAWDKSL 1291



 Score = 89.0 bits (219), Expect(2) = 1e-40
 Identities = 63/172 (36%), Positives = 93/172 (54%), Gaps = 7/172 (4%)
 Frame = -3

Query: 912  LHYHPGKANVVADVLSRKSQGLIVG*TLRRWK---MLDVMRTLIFVLEDKNLELMFYSLV 742
            +HYHPGKANVVAD LSRKS   +       W      +V R L    E  NL ++ +  V
Sbjct: 981  IHYHPGKANVVADALSRKSYCNVA------WVEQLCCEVQRDL----EHLNLGIVEHGFV 1030

Query: 741  AQ-STLPRG*SKVRGMIRN*KEFELPEIEDGKN--QYEWSLSADGGLR*LG-KLCILNNI 574
            A     P    +VR  I    + E+ E++      +    +  + G   +G +LC+  N 
Sbjct: 1031 AALEAQPTLVEQVR--IAQASDPEIAELKKNMRVGKARGFVEDEQGTIWMGERLCVPENK 1088

Query: 573  QFKEYFLSEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTCQ 418
            + K+  L+EAH+++ +IHPGSTK+Y+DLK +FWW  M R++AE+V     CQ
Sbjct: 1089 ELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALYDVCQ 1140


>gb|AAV59338.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 1238

 Score =  103 bits (258), Expect(2) = 1e-39
 Identities = 66/151 (43%), Positives = 81/151 (53%), Gaps = 16/151 (10%)
 Frame = -2

Query: 415  VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
            VK EHQRPAG LQ   + E K +   MDF++GLPRT  GH+ IWV+VDRLTK+AHF+  +
Sbjct: 856  VKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIP-V 914

Query: 235  E*TL*SKN------H*ISCSEIVNFVILLYRDSRFTSQFWQSL*NASGTLLKFSIALHPQ 74
              T   K         I C   V   I+  R S+FTS+FWQ L    GT L FS   HPQ
Sbjct: 915  HTTYSGKKLAELYLARIMCLHGVPKKIVSDRGSQFTSKFWQKLQEELGTRLNFSTTYHPQ 974

Query: 73   MDGQYESI----------MCFRFHGQWELTL 11
             DGQ E +              F G W+ +L
Sbjct: 975  TDGQTERVNQILEDMLRACALDFGGAWDKSL 1005



 Score = 87.4 bits (215), Expect(2) = 1e-39
 Identities = 61/165 (36%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
 Frame = -3

Query: 912  LHYHPGKANVVADVLSRKSQGLIVG*TLRRWK---MLDVMRTLIFVLEDKNLELMFYS-L 745
            +HYHPGKANVVAD LSRKS   +       W      +V R L    E  NL ++ +  +
Sbjct: 695  IHYHPGKANVVADALSRKSYCNVA------WVEQLCCEVQRDL----EHLNLGIVEHGFV 744

Query: 744  VAQSTLPRG*SKVRGMIRN*KEFELPEIEDGKN--QYEWSLSADGGLR*LG-KLCILNNI 574
            VA    P    +VR  I    + E+ E++      +    +  + G   +G +LC+  N 
Sbjct: 745  VALEAQPTLVEQVR--IAQASDPEIAELKKNMRVGKARGFVEDEQGTIWMGERLCVPENK 802

Query: 573  QFKEYFLSEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYV 439
            + K+  L+EAH+++ +IHPGSTK+Y+DLK +FWW  M R++AE+V
Sbjct: 803  ELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFV 847


>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1053

 Score =  102 bits (255), Expect(2) = 2e-39
 Identities = 62/127 (48%), Positives = 78/127 (61%), Gaps = 5/127 (3%)
 Frame = -2

Query: 415  VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
            VK EHQRPAG LQ   + E K +   MDF++GLPRT  G + IWVI+DRLTK+AHF+   
Sbjct: 679  VKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTQTGCDSIWVIIDRLTKVAHFIPVK 738

Query: 235  E*TL*SKNH*ISCSEIVNF-----VILLYRDSRFTSQFWQSL*NASGTLLKFSIALHPQM 71
                 SK   +  ++IV        I+  R S+FTS+FW+SL  A GT L FS A HPQ 
Sbjct: 739  TTYQSSKLAELYVAKIVCLHGVPKKIVSDRGSQFTSRFWKSLHEALGTRLNFSTAYHPQT 798

Query: 70   DGQYESI 50
            DGQ E +
Sbjct: 799  DGQTERV 805



 Score = 87.8 bits (216), Expect(2) = 2e-39
 Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
 Frame = -3

Query: 912 LHYHPGKANVVADVLSRKSQGLIVG*TLRRWKMLDVMRTLIFVLEDKNLELMFYSLV-AQ 736
           +HYHPGKANVVAD LSRK+    +     + ++ + ++ L       NLE++    V A 
Sbjct: 518 IHYHPGKANVVADALSRKAYCNTILVQKNQPELYEELKHL-------NLEIVNQGCVNAL 570

Query: 735 STLPRG*SKVRGMIRN*KEFELPEIEDGKNQYE------WSLSADGGLR*LGKLCILNNI 574
              P   S++R      K+ E  +I++ K          +S    G +    ++C+ N  
Sbjct: 571 EVQPTLQSQIRE-----KQLEDEDIKEIKKNMRRGKAPGFSEDEQGTVWFGNRICVPNQQ 625

Query: 573 QFKEYFLSEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTCQ 418
           + K+  L EAH S  +IHPGSTK+Y+DLK ++WW  M R++AE+V     CQ
Sbjct: 626 ELKQSILKEAHESPYSIHPGSTKMYQDLKEKYWWVSMKREIAEFVAHCDICQ 677


>gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1759

 Score = 98.2 bits (243), Expect(2) = 2e-39
 Identities = 65/152 (42%), Positives = 82/152 (53%), Gaps = 17/152 (11%)
 Frame = -2

Query: 415  VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
            VK EHQRPAG LQ   + E K +   MDF++GLPRT  G++ IWVIVDRLTK AHF+  +
Sbjct: 1388 VKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPSGYDSIWVIVDRLTKSAHFVP-M 1446

Query: 235  E*TL*SK-------NH*ISCSEIVNFVILLYRDSRFTSQFWQSL*NASGTLLKFSIALHP 77
            + T   K        H + C       I+  R ++FTS+FW+ L  A GT L FS A HP
Sbjct: 1447 KTTFDGKKLAELYMTH-VVCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHP 1505

Query: 76   QMDGQYESI----------MCFRFHGQWELTL 11
            Q DGQ E +              F G W+  L
Sbjct: 1506 QTDGQTERVNQILEDMLRACALDFEGTWDRCL 1537



 Score = 92.0 bits (227), Expect(2) = 2e-39
 Identities = 59/165 (35%), Positives = 87/165 (52%)
 Frame = -3

Query: 912  LHYHPGKANVVADVLSRKSQGLIVG*TLRRWKMLDVMRTLIFVLEDKNLELMFYSLVAQS 733
            +HYHPGKANVVAD LSRK+   +      + ++   +  L   +    +     SL  Q 
Sbjct: 1227 IHYHPGKANVVADALSRKTYCNVDQIRPDQDRLCRDLEKLRLTVVQSGVAA---SLTVQP 1283

Query: 732  TLPRG*SKVRGMIRN*KEFELPEIEDGKNQYEWSLSADGGLR*LGKLCILNNIQFKEYFL 553
            TL     K +      KE  +  I++ K+  ++S+   G +    ++C+    + ++  L
Sbjct: 1284 TLESQIRKAQKDDEGIKEL-IKRIQEKKDT-DFSIDDQGTVWYGPRICVPAKKELRDLIL 1341

Query: 552  SEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTCQ 418
             EAH S  +IHPGSTK+Y+D+K  FWW GM RDVAEYV     CQ
Sbjct: 1342 KEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQ 1386


>emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]
          Length = 1481

 Score =  102 bits (254), Expect(2) = 2e-39
 Identities = 60/127 (47%), Positives = 75/127 (59%), Gaps = 5/127 (3%)
 Frame = -2

Query: 415  VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
            VK EHQ+PAG LQ   + E K +   MDF++GLPRT  GH+ IWV+VDRLTK+AHF+   
Sbjct: 1099 VKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVK 1158

Query: 235  E*TL*SK-----NH*ISCSEIVNFVILLYRDSRFTSQFWQSL*NASGTLLKFSIALHPQM 71
                  K        + C   V   I+  R S+FTS+FWQ L +  GT L FS A HPQ 
Sbjct: 1159 TTYTGHKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQSELGTRLNFSTAYHPQT 1218

Query: 70   DGQYESI 50
            DGQ E +
Sbjct: 1219 DGQTERV 1225



 Score = 87.8 bits (216), Expect(2) = 2e-39
 Identities = 56/166 (33%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
 Frame = -3

Query: 912  LHYHPGKANVVADVLSRKSQGLIVG*TLRRWKMLDVMRTLIFVLEDKNLELMFYSLVAQS 733
            +HYHPGKANVVAD LSRKS   +       W++      L   +  K        + A  
Sbjct: 938  IHYHPGKANVVADALSRKSYCNMSEGRSLPWELCQEFEKLNLGIVSKGF------MAALE 991

Query: 732  TLPRG*SKVRGMIRN*KEFELPEIEDGKNQYEWSLSADGGLR*LG-KLCILNNIQFKEYF 556
              P    ++R    N  + +  +    + +    +  + G   LG ++C+  N + K   
Sbjct: 992  AKPTLFDQIREAQVNDPDIQEIKKNMRRGKAVGFVEDEQGTVWLGERICVPENKELKVTI 1051

Query: 555  LSEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTCQ 418
            + EAH +  +IHPGSTK+Y+DLK QFWW  M R++AEYV     CQ
Sbjct: 1052 MKEAHETLYSIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDECQ 1097


>gb|ABA97418.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1807

 Score = 97.4 bits (241), Expect(2) = 3e-39
 Identities = 65/152 (42%), Positives = 82/152 (53%), Gaps = 17/152 (11%)
 Frame = -2

Query: 415  VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
            VK EHQRPAG LQ   + E K +   MDF++GLPRT  G++ IWVIVDRLTK AHF+  +
Sbjct: 1436 VKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPNGYDSIWVIVDRLTKSAHFVP-V 1494

Query: 235  E*TL*SK-------NH*ISCSEIVNFVILLYRDSRFTSQFWQSL*NASGTLLKFSIALHP 77
            + T   K        H + C       I+  R ++FTS+FW+ L  A GT L FS A HP
Sbjct: 1495 KTTYDGKKLAELYMTH-VVCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHP 1553

Query: 76   QMDGQYESI----------MCFRFHGQWELTL 11
            Q DGQ E +              F G W+  L
Sbjct: 1554 QTDGQTERVNQILEDMLRAYALDFEGTWDRCL 1585



 Score = 92.4 bits (228), Expect(2) = 3e-39
 Identities = 59/166 (35%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
 Frame = -3

Query: 912  LHYHPGKANVVADVLSRKSQGLIVG*TLRRWKMLDVMRTLIFVLEDKNLELMFYSLVAQS 733
            +HYHPGKANVVAD LSRK+   +      +  +   +  L   +    +     SL  Q 
Sbjct: 1275 IHYHPGKANVVADALSRKAYCNVAQIRPDQDHLCGELEKLRLTVVQSGVPA---SLTVQP 1331

Query: 732  TLPRG*SKVRGMIRN*KEF-ELPEIEDGKNQYEWSLSADGGLR*LGKLCILNNIQFKEYF 556
            TL    S++R   ++ +   EL +    K    +S+   G +    ++C+    + ++  
Sbjct: 1332 TLE---SRIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLI 1388

Query: 555  LSEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTCQ 418
            L EAH S  +IHPGSTK+Y+D+K  FWW GM RDVAEYV     CQ
Sbjct: 1389 LKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALSDICQ 1434


>emb|CAH66707.1| OSIGBa0147J19.11 [Oryza sativa Indica Group]
          Length = 1851

 Score = 97.4 bits (241), Expect(2) = 8e-39
 Identities = 65/152 (42%), Positives = 82/152 (53%), Gaps = 17/152 (11%)
 Frame = -2

Query: 415  VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
            VK EHQRPAG LQ   + E K +   MDF++GLPRT  G++ IWVIVDRLTK AHF+  +
Sbjct: 1480 VKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPSGYDSIWVIVDRLTKSAHFVP-V 1538

Query: 235  E*TL*SK-------NH*ISCSEIVNFVILLYRDSRFTSQFWQSL*NASGTLLKFSIALHP 77
            + T   K        H + C       I+  R ++FTS+FW+ L  A GT L FS A HP
Sbjct: 1539 KTTYDGKKLAELYITH-VVCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHP 1597

Query: 76   QMDGQYESI----------MCFRFHGQWELTL 11
            Q DGQ E +              F G W+  L
Sbjct: 1598 QTDGQTERVNQILEDMLRACALDFEGTWDRCL 1629



 Score = 90.9 bits (224), Expect(2) = 8e-39
 Identities = 60/166 (36%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
 Frame = -3

Query: 912  LHYHPGKANVVADVLSRKSQGLIVG*TLRRWKMLDVMRTLIFVLEDKNLELMFYSLVAQS 733
            +HYHPGKANVVAD LSRK+   I      +  +   +  L   +    +     SL  Q 
Sbjct: 1319 IHYHPGKANVVADALSRKAYCNIAQIRPDQDHLCRELEKLRLTVVQSGVPA---SLTVQP 1375

Query: 732  TLPRG*SKVRGMIRN*KEF-ELPEIEDGKNQYEWSLSADGGLR*LGKLCILNNIQFKEYF 556
            TL    S++R   ++ +   EL +    K    +S+   G +    ++C+    + ++  
Sbjct: 1376 TLE---SQIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLI 1432

Query: 555  LSEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTCQ 418
            L EAH S  +IHPGSTK+Y+D+K  FWW GM RDVAEYV     CQ
Sbjct: 1433 LKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQ 1478


>emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group]
            gi|57834090|emb|CAE04759.2| OSJNBb0060E08.22 [Oryza
            sativa Japonica Group]
          Length = 1851

 Score = 97.4 bits (241), Expect(2) = 1e-38
 Identities = 65/152 (42%), Positives = 82/152 (53%), Gaps = 17/152 (11%)
 Frame = -2

Query: 415  VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
            VK EHQRPAG LQ   + E K +   MDF++GLPRT  G++ IWVIVDRLTK AHF+  +
Sbjct: 1480 VKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPSGYDSIWVIVDRLTKSAHFVP-V 1538

Query: 235  E*TL*SK-------NH*ISCSEIVNFVILLYRDSRFTSQFWQSL*NASGTLLKFSIALHP 77
            + T   K        H + C       I+  R ++FTS+FW+ L  A GT L FS A HP
Sbjct: 1539 KTTYDGKKLAELYMTH-VVCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHP 1597

Query: 76   QMDGQYESI----------MCFRFHGQWELTL 11
            Q DGQ E +              F G W+  L
Sbjct: 1598 QTDGQTERVNQILEDMLRACALDFEGTWDRCL 1629



 Score = 90.5 bits (223), Expect(2) = 1e-38
 Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
 Frame = -3

Query: 912  LHYHPGKANVVADVLSRKSQGLIVG*TLRRWKMLDVMRTLIFVLEDKNLELMFYSLVAQS 733
            +HYHPGKANVVAD LSRK+   I      +  +   +  L   +    +     SL  Q 
Sbjct: 1319 IHYHPGKANVVADALSRKAYCNIAQIRPDQDHLCRELEKLRLTVVQSGVPA---SLTVQP 1375

Query: 732  TLPRG*SKVRGMIRN*KEF-ELPEIEDGKNQYEWSLSADGGLR*LGKLCILNNIQFKEYF 556
            TL    S++R   ++ +   EL +    K    +S+   G +    ++C+    + +   
Sbjct: 1376 TLE---SQIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTIWCGPRICVPAKKELRNLI 1432

Query: 555  LSEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTCQ 418
            L EAH S  +IHPGSTK+Y+D+K  FWW GM RDVAEYV     CQ
Sbjct: 1433 LKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQ 1478


>gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1851

 Score = 95.5 bits (236), Expect(2) = 1e-38
 Identities = 64/152 (42%), Positives = 81/152 (53%), Gaps = 17/152 (11%)
 Frame = -2

Query: 415  VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
            VK EH RPAG LQ   + E K +   MDF++GLPRT  G++ IWVIVDRLTK AHF+  +
Sbjct: 1480 VKAEHHRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPSGYDSIWVIVDRLTKSAHFVP-V 1538

Query: 235  E*TL*SK-------NH*ISCSEIVNFVILLYRDSRFTSQFWQSL*NASGTLLKFSIALHP 77
            + T   K        H + C       I+  R ++FTS+FW+ L  A GT L FS A HP
Sbjct: 1539 KTTYDGKKLAELYMTH-VVCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHP 1597

Query: 76   QMDGQYESI----------MCFRFHGQWELTL 11
            Q DGQ E +              F G W+  L
Sbjct: 1598 QTDGQTERVNQILEDMLRACALDFEGTWDRCL 1629



 Score = 92.4 bits (228), Expect(2) = 1e-38
 Identities = 60/166 (36%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
 Frame = -3

Query: 912  LHYHPGKANVVADVLSRKSQGLIVG*TLRRWKMLDVMRTLIFVLEDKNLELMFYSLVAQS 733
            +HYHPGKANVVAD LSRK+   +      + ++   +  L   +    +     SL  Q 
Sbjct: 1319 IHYHPGKANVVADALSRKAYCNVAQIRPDQDQLCRELEKLRLTVVQSGVPA---SLTVQP 1375

Query: 732  TLPRG*SKVRGMIRN*KEF-ELPEIEDGKNQYEWSLSADGGLR*LGKLCILNNIQFKEYF 556
            TL    S++R   +  +   EL E    K    +S+   G +    ++C+    + ++  
Sbjct: 1376 TLE---SQIREAQKEDEGIKELIERIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLI 1432

Query: 555  LSEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTCQ 418
            L EAH S  +IHPGSTK+Y+D+K  FWW GM RDVAEYV     CQ
Sbjct: 1433 LKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQ 1478


>gb|AAD22158.1|AF061282_11 polyprotein [Sorghum bicolor]
          Length = 924

 Score = 96.7 bits (239), Expect(2) = 1e-38
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 15/151 (9%)
 Frame = -2

Query: 415  VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
            VK EHQRPAG L+   V E K +  SMDF+ GLPR+ +GH+ IWVIVDRLTK+AHF+   
Sbjct: 548  VKAEHQRPAGLLKPLDVPEWKWEGISMDFIVGLPRSPKGHDSIWVIVDRLTKVAHFIPVK 607

Query: 235  E*TL*SKNH*ISCSEIVNF-----VILLYRDSRFTSQFWQSL*NASGTLLKFSIALHPQM 71
                  +   +    I+        I+  R  ++ S+FWQSL  A GT L +S A HPQ 
Sbjct: 608  TVYRTEQLADLYVDHILRLHGAPTSIISDRGPQWVSRFWQSLHKAIGTRLDYSTAYHPQT 667

Query: 70   DGQYESI----------MCFRFHGQWELTLS 8
            DGQ E +             ++   WE +LS
Sbjct: 668  DGQTERVNQVLEDMLRACVLKYGSDWEKSLS 698



 Score = 90.9 bits (224), Expect(2) = 1e-38
 Identities = 60/166 (36%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
 Frame = -3

Query: 912 LHYHPGKANVVADVLSRKSQGLIVG*TLRRWKMLDVMRTLIFVLEDKNLELMFYSLVAQS 733
           +HYHPGKANVVAD LSRKS             M  +   L   + D  LE++   L+++ 
Sbjct: 387 IHYHPGKANVVADALSRKSY-------CHSLSMEAIPPELCQEMGDLQLEIVPKGLLSEL 439

Query: 732 TLPRG*S-KVRGMIRN*KEF-ELPEIEDGKNQYEWSLSADGGLR*LGKLCILNNIQFKEY 559
            +      ++R   R   E  E+ E  +G    E+ +   G      ++C+ ++   +E 
Sbjct: 440 RIQYDLEDRIRRAQRGCPEIQEVHERMEGGKCPEFRVDERGTYWCKNRICVPSDEPLREE 499

Query: 558 FLSEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTC 421
            LSEAH SR  IHPGSTK+Y DL+  FWWK M +D+A +V +  TC
Sbjct: 500 ILSEAHDSRYCIHPGSTKMYADLRKVFWWKDMRKDIAGHVARCDTC 545


>emb|CAJ86189.1| H0306F03.2 [Oryza sativa Indica Group]
          Length = 1135

 Score = 94.7 bits (234), Expect(2) = 2e-38
 Identities = 64/152 (42%), Positives = 81/152 (53%), Gaps = 17/152 (11%)
 Frame = -2

Query: 415  VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
            VK EHQRPAG LQ   + E K +   MDF++GLPRT   ++ IWVIVDRLTK AHF+  +
Sbjct: 764  VKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPSRYDSIWVIVDRLTKSAHFVP-V 822

Query: 235  E*TL*SK-------NH*ISCSEIVNFVILLYRDSRFTSQFWQSL*NASGTLLKFSIALHP 77
            + T   K        H + C       I+  R ++FTS+FW+ L  A GT L FS A HP
Sbjct: 823  KTTFDGKKLAELYMTH-VVCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHP 881

Query: 76   QMDGQYESI----------MCFRFHGQWELTL 11
            Q DGQ E +              F G W+  L
Sbjct: 882  QTDGQTERVNQILEDMLRACALDFEGTWDRCL 913



 Score = 92.4 bits (228), Expect(2) = 2e-38
 Identities = 60/166 (36%), Positives = 88/166 (53%), Gaps = 1/166 (0%)
 Frame = -3

Query: 912  LHYHPGKANVVADVLSRKSQGLIVG*TLRRWKMLDVMRTLIFVLEDKNLELMFYSLVAQS 733
            +HYHPGKANVVAD LSRK+   I      + ++   +  L   +    +     SL  Q 
Sbjct: 603  IHYHPGKANVVADALSRKAYCNIAQIRPDQDRLCRELEKLRLTVVQSGVPA---SLTVQP 659

Query: 732  TLPRG*SKVRGMIRN*KEF-ELPEIEDGKNQYEWSLSADGGLR*LGKLCILNNIQFKEYF 556
            TL    S++R   ++ +   EL +    K    +S+   G +    ++C+    + ++  
Sbjct: 660  TLE---SQIREAQKDDEGIKELIKRIQEKKDTNFSIDNQGTVWCGPRICVPAKKELRDLI 716

Query: 555  LSEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTCQ 418
            L EAH+S  +IHPGSTK+Y+D+K  FWW GM RDVAEYV     CQ
Sbjct: 717  LKEAHQSAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQ 762


>emb|CAD41625.1| OSJNBa0091D06.10 [Oryza sativa Japonica Group]
          Length = 1831

 Score = 94.4 bits (233), Expect(2) = 2e-38
 Identities = 59/127 (46%), Positives = 76/127 (59%), Gaps = 7/127 (5%)
 Frame = -2

Query: 415  VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
            VK EHQRPAG LQ   + E K +   MDF++GLPRT  G++ IWVIVDRLTK AHF+  +
Sbjct: 1482 VKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPSGYDSIWVIVDRLTKSAHFVP-V 1540

Query: 235  E*TL*SK-------NH*ISCSEIVNFVILLYRDSRFTSQFWQSL*NASGTLLKFSIALHP 77
            + T   K        H + C       I+  R ++FTS+FW+ L  A GT L FS A HP
Sbjct: 1541 KTTYDGKKLAELYMTH-VVCRFGYPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHP 1599

Query: 76   QMDGQYE 56
            Q DG ++
Sbjct: 1600 QTDGTWD 1606



 Score = 92.4 bits (228), Expect(2) = 2e-38
 Identities = 58/165 (35%), Positives = 86/165 (52%)
 Frame = -3

Query: 912  LHYHPGKANVVADVLSRKSQGLIVG*TLRRWKMLDVMRTLIFVLEDKNLELMFYSLVAQS 733
            +HYHPGKANVVAD LSRK    +      + ++   +  L   +    +     SL  Q 
Sbjct: 1321 IHYHPGKANVVADALSRKVYCNVAQIWPDQDRLCRELEKLRLTVVQSGVPA---SLTVQP 1377

Query: 732  TLPRG*SKVRGMIRN*KEFELPEIEDGKNQYEWSLSADGGLR*LGKLCILNNIQFKEYFL 553
            TL     + +  +   KE  +  I++ K+   +S+   G +    ++C+    + ++  L
Sbjct: 1378 TLESQIREAQKDVERIKEL-IKRIQEKKDT-NFSIDDQGTVWCGPRICVPAKKELRDLIL 1435

Query: 552  SEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTCQ 418
             EAH S  +IHPGSTK+Y+D+K  FWW GM RDVAEYV     CQ
Sbjct: 1436 KEAHESAYSIHPGSTKMYQDIKAYFWWSGMKRDVAEYVALCDICQ 1480


>gb|AAX95143.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|77549637|gb|ABA92434.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1847

 Score = 99.0 bits (245), Expect(2) = 4e-38
 Identities = 59/127 (46%), Positives = 73/127 (57%), Gaps = 5/127 (3%)
 Frame = -2

Query: 415  VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
            VK EHQ+P G LQ   + E K +   MDF++GLPRT  GH+ IWVIVDRLTK+AHF+   
Sbjct: 1530 VKAEHQKPVGLLQPLKIPEWKWEELGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPIK 1589

Query: 235  E*TL*SK-----NH*ISCSEIVNFVILLYRDSRFTSQFWQSL*NASGTLLKFSIALHPQM 71
                 S+        I C   V   I+  R S+FTS FW+ L    G+ L FS A HPQ 
Sbjct: 1590 TTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQT 1649

Query: 70   DGQYESI 50
            DGQ E +
Sbjct: 1650 DGQTERV 1656



 Score = 87.0 bits (214), Expect(2) = 4e-38
 Identities = 61/167 (36%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
 Frame = -3

Query: 912  LHYHPGKANVVADVLSRKSQGLIVG*TLRRWKMLDVMRTLIFVLEDKNLELMFYSLVAQ- 736
            +HYHPGKANVVAD LSRK        T  R   L++ +      E  NL ++    VA  
Sbjct: 1369 IHYHPGKANVVADALSRKGY---CNATEGRQLPLELCKEF----ERLNLGIVSRGFVAAL 1421

Query: 735  STLPRG*SKVRGMIRN*KEFELPEIEDGKNQYEWSLSADGGLR*LG-KLCILNNIQFKEY 559
               P    +VR    N  + +  +    + +    L  + G   LG ++C+ +N   K+ 
Sbjct: 1422 EAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDA 1481

Query: 558  FLSEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTCQ 418
             L EAH +  +IHPGSTK+Y+DLK +FWW  M R++AEYV   + CQ
Sbjct: 1482 ILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCVVCQ 1528


>gb|AAN09868.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1802

 Score = 97.1 bits (240), Expect(2) = 5e-38
 Identities = 59/127 (46%), Positives = 75/127 (59%), Gaps = 5/127 (3%)
 Frame = -2

Query: 415  VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
            VK EHQRPAG LQ   V E K D   MDF++GLP+T  G++ IWV+VDRLTK+A F+   
Sbjct: 1420 VKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVK 1479

Query: 235  E*TL*SKNH*ISCSEIVNF-----VILLYRDSRFTSQFWQSL*NASGTLLKFSIALHPQM 71
                 +K   +  + IV+       I+  R S+FTS FW+ L    GT L FS A HPQ 
Sbjct: 1480 TTYGGNKLAELYFARIVSLHGVPKKIVSDRGSQFTSHFWKKLQEELGTRLNFSTAYHPQT 1539

Query: 70   DGQYESI 50
            DGQ E +
Sbjct: 1540 DGQTERL 1546



 Score = 88.6 bits (218), Expect(2) = 5e-38
 Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 11/176 (6%)
 Frame = -3

Query: 912  LHYHPGKANVVADVLSRKSQGLIVG*TLRRWKMLDVMRTLIFVLEDKNLELM----FYSL 745
            +HYHPGKANVVAD LSRKS             +  +   L   +E  NL ++      +L
Sbjct: 1259 IHYHPGKANVVADALSRKSH-------CNTLNVRGIPPELSQQMEALNLSIVSRGFLAAL 1311

Query: 744  VAQSTL-------PRG*SKVRGMIRN*KEFELPEIEDGKNQYEWSLSADGGLR*LGKLCI 586
             A+ TL        +    + G+++N K+ +     + ++   W+ +         ++C+
Sbjct: 1312 EAKPTLLDQIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGN---------RVCV 1362

Query: 585  LNNIQFKEYFLSEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTCQ 418
             +N + K+  L EAH S  +IHPGSTK+Y DLK ++WW  M R++AE+V     CQ
Sbjct: 1363 PDNRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALRDVCQ 1418


>gb|AAP52585.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1797

 Score = 97.1 bits (240), Expect(2) = 5e-38
 Identities = 59/127 (46%), Positives = 75/127 (59%), Gaps = 5/127 (3%)
 Frame = -2

Query: 415  VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
            VK EHQRPAG LQ   V E K D   MDF++GLP+T  G++ IWV+VDRLTK+A F+   
Sbjct: 1415 VKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVK 1474

Query: 235  E*TL*SKNH*ISCSEIVNF-----VILLYRDSRFTSQFWQSL*NASGTLLKFSIALHPQM 71
                 +K   +  + IV+       I+  R S+FTS FW+ L    GT L FS A HPQ 
Sbjct: 1475 TTYGGNKLAELYFARIVSLHGVPKKIVSDRGSQFTSHFWKKLQEELGTRLNFSTAYHPQT 1534

Query: 70   DGQYESI 50
            DGQ E +
Sbjct: 1535 DGQTERL 1541



 Score = 88.6 bits (218), Expect(2) = 5e-38
 Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 11/176 (6%)
 Frame = -3

Query: 912  LHYHPGKANVVADVLSRKSQGLIVG*TLRRWKMLDVMRTLIFVLEDKNLELM----FYSL 745
            +HYHPGKANVVAD LSRKS             +  +   L   +E  NL ++      +L
Sbjct: 1254 IHYHPGKANVVADALSRKSH-------CNTLNVRGIPPELSQQMEALNLSIVSRGFLAAL 1306

Query: 744  VAQSTL-------PRG*SKVRGMIRN*KEFELPEIEDGKNQYEWSLSADGGLR*LGKLCI 586
             A+ TL        +    + G+++N K+ +     + ++   W+ +         ++C+
Sbjct: 1307 EAKPTLLDQIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGN---------RVCV 1357

Query: 585  LNNIQFKEYFLSEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTCQ 418
             +N + K+  L EAH S  +IHPGSTK+Y DLK ++WW  M R++AE+V     CQ
Sbjct: 1358 PDNRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALRDVCQ 1413


>gb|ABA94234.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1214

 Score = 95.5 bits (236), Expect(2) = 5e-38
 Identities = 64/152 (42%), Positives = 81/152 (53%), Gaps = 17/152 (11%)
 Frame = -2

Query: 415  VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
            VK EHQRPAG LQ   + E K +   MD ++GLPRT  G++ IWVIVDRLTK AHF+  +
Sbjct: 864  VKAEHQRPAGLLQPLPIPEWKWEEIGMDLITGLPRTPSGYDSIWVIVDRLTKSAHFVA-V 922

Query: 235  E*TL*SK-------NH*ISCSEIVNFVILLYRDSRFTSQFWQSL*NASGTLLKFSIALHP 77
            + T   K        H + C       I+  R ++FTS+FW+ L  A GT L FS A HP
Sbjct: 923  KTTFDGKKLAELYMTH-VVCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHP 981

Query: 76   QMDGQYESI----------MCFRFHGQWELTL 11
            Q DGQ E +              F G W+  L
Sbjct: 982  QTDGQTERVNQILEDMLRACALDFEGTWDRCL 1013



 Score = 90.1 bits (222), Expect(2) = 5e-38
 Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
 Frame = -3

Query: 912  LHYHPGKANVVADVLSRKSQGLIVG*TLRRWKMLDVMRTLIFVLEDKNLELMFYSLVAQS 733
            +HYHPGKANVVAD LSRK+   +      + ++   +  L   +    +     SL  Q 
Sbjct: 703  IHYHPGKANVVADALSRKAYCNVAQIRPDQDRLCRELEKLRLTVVQSGVPA---SLTVQP 759

Query: 732  TLPRG*SKVRGMIRN*KEF-ELPEIEDGKNQYEWSLSADGGLR*LGKLCILNNIQFKEYF 556
            TL    S++R   ++ +   EL +    K    +S+   G +    ++C+    + ++  
Sbjct: 760  TLE---SQIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLI 816

Query: 555  LSEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTCQ 418
            L EAH S  +IHPGSTK+Y+D+K  FWW GM RDV EYV     CQ
Sbjct: 817  LKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVTEYVALCDICQ 862


>gb|ABF93914.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1776

 Score = 94.7 bits (234), Expect(2) = 7e-38
 Identities = 64/152 (42%), Positives = 81/152 (53%), Gaps = 17/152 (11%)
 Frame = -2

Query: 415  VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 236
            VK EHQRPAG LQ   +   K +   MDF++GLPRT  G++ IWVIVDRLTK AHF+  +
Sbjct: 1405 VKAEHQRPAGLLQPLPIPGWKWEEIGMDFITGLPRTPSGYDSIWVIVDRLTKSAHFVP-V 1463

Query: 235  E*TL*SK-------NH*ISCSEIVNFVILLYRDSRFTSQFWQSL*NASGTLLKFSIALHP 77
            + T   K        H + C       I+  R ++FTS+FW+ L  A GT L FS A HP
Sbjct: 1464 KTTYDGKKLAELYMTH-VVCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHP 1522

Query: 76   QMDGQYESI----------MCFRFHGQWELTL 11
            Q DGQ E +              F G W+  L
Sbjct: 1523 QTDGQTERVNQILEDMLRACALDFEGTWDRCL 1554



 Score = 90.5 bits (223), Expect(2) = 7e-38
 Identities = 59/166 (35%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
 Frame = -3

Query: 912  LHYHPGKANVVADVLSRKSQGLIVG*TLRRWKMLDVMRTLIFVLEDKNLELMFYSLVAQS 733
            +HYHPGKANVVAD LSRK+   +      +  +   +  L   +    +     SL  Q 
Sbjct: 1244 IHYHPGKANVVADALSRKAYCNVAQIRPDQDHLCRELEKLRLTVVQSGVPA---SLTVQP 1300

Query: 732  TLPRG*SKVRGMIRN*KEF-ELPEIEDGKNQYEWSLSADGGLR*LGKLCILNNIQFKEYF 556
            TL    S++R   ++ +   EL +    K    +S+   G +    ++C+    + ++  
Sbjct: 1301 TLE---SQIREAQKDDEGVKELIKRIQEKKDTNFSIDDQGTVWCGSRICVPAKKELRDLI 1357

Query: 555  LSEAHRSRKAIHPGSTKIYRDLKCQFWWKGMNRDVAEYVLKGLTCQ 418
            L EAH S  +IHPGSTK+Y+D+K  FWW GM RDVAEYV     CQ
Sbjct: 1358 LREAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQ 1403