BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00024618
         (610 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35966.3| unnamed protein product [Vitis vinifera]              258   7e-67
ref|XP_006841470.1| hypothetical protein AMTR_s00003p00103190 [A...   152   7e-35
ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containi...   149   6e-34
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi...   145   7e-33
ref|XP_003628741.1| Pentatricopeptide repeat-containing protein ...   145   1e-32
emb|CBI28140.3| unnamed protein product [Vitis vinifera]              144   2e-32
emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]   144   2e-32
emb|CBI17453.3| unnamed protein product [Vitis vinifera]              144   3e-32
ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containi...   144   3e-32
ref|XP_006446854.1| hypothetical protein CICLE_v10018065mg [Citr...   142   8e-32
ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containi...   140   3e-31
ref|XP_003597735.1| Pentatricopeptide repeat-containing protein ...   139   5e-31
ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [S...   139   5e-31
ref|XP_006646428.1| PREDICTED: pentatricopeptide repeat-containi...   138   1e-30
ref|XP_003612041.1| Pentatricopeptide repeat-containing protein ...   138   1e-30
emb|CBI36131.3| unnamed protein product [Vitis vinifera]              138   1e-30
ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containi...   138   1e-30
ref|XP_004486752.1| PREDICTED: putative pentatricopeptide repeat...   138   1e-30
ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citr...   137   2e-30
ref|XP_006360941.1| PREDICTED: pentatricopeptide repeat-containi...   137   2e-30

>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  258 bits (660), Expect = 7e-67
 Identities = 126/194 (64%), Positives = 149/194 (76%)
 Frame = -1

Query: 583 MLLPLLRSSVNLTXXXXXXXXXXXHGFPHHNHLLAKLVDLRSIDHARAVFDQIPSPTDYS 404
           MLL LLR++ +LT           HG P   HL+ KL+DL SID+AR V DQ PSPTD+S
Sbjct: 1   MLLSLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLHSIDYARFVLDQTPSPTDFS 60

Query: 403 WNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKACSILDAIKQGEQIHTHVV 224
           WNSLIR YT++GSPQ+SLFLY KMLR+  KPSNFT+P V KACS L ++ +GEQIHTHV+
Sbjct: 61  WNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVL 120

Query: 223 KFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSWNSIISGYVQWGEIENARE 44
           + GF SDLFV NSLIDMYCKC  + SA    D+M  RDEVSWNSIISGYVQWG++E AR+
Sbjct: 121 RLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARD 180

Query: 43  LFEAMPIRRNVVCW 2
           LFE MP+RRNVVCW
Sbjct: 181 LFEEMPMRRNVVCW 194



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
 Frame = -1

Query: 502 PHHNHLLAKLVDLRS----IDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSK 335
           P +  L+  L+D+ S    ++ A  +FD +      SWN++I G    G  ++++ LY  
Sbjct: 260 PLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRH 319

Query: 334 MLRTDVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSC 155
           M    VKP+  T  +V  AC+ L A++ G ++H ++ + G   ++ +  +L+DMY KC  
Sbjct: 320 MKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGK 379

Query: 154 IWSAHRVLDEMQDRDEVSWNSIISGYVQWGEIENARELFEAM 29
           I  A  +  +  ++D   WN++I G    G+  ++  +F  M
Sbjct: 380 IDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQM 421



 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
 Frame = -1

Query: 493 NHLLAKLVDLRSIDHARAVFDQIPSPTDY-SWNSLIRGYTLNGSPQDSLFLYSKML--RT 323
           N +++  V    ++ AR +F+++P   +   W ++I GY   G   + L L+ +ML    
Sbjct: 163 NSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSAD 222

Query: 322 DVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSA 143
           +V+P+  T   +  ACS L   + G  +   +       +  +  +LIDMY KC  +  A
Sbjct: 223 EVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKA 282

Query: 142 HRVLDEMQDRDEVSWNSIISGYVQWGEIENARELFEAM 29
            R+ D +  ++  SWN+II+G VQ G +E A +L+  M
Sbjct: 283 WRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHM 320


>ref|XP_006841470.1| hypothetical protein AMTR_s00003p00103190 [Amborella trichopoda]
           gi|548843491|gb|ERN03145.1| hypothetical protein
           AMTR_s00003p00103190 [Amborella trichopoda]
          Length = 297

 Score =  152 bits (384), Expect = 7e-35
 Identities = 71/169 (42%), Positives = 115/169 (68%), Gaps = 6/169 (3%)
 Frame = -1

Query: 508 GFPHHNHLLAKLVDL------RSIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLF 347
           G   +N L+A LV         ++++ARAVF+Q+  P  + WN++IRG + N + ++++ 
Sbjct: 119 GLSQNNFLMASLVKFCAEPTSGNLNYARAVFNQLKDPHPFIWNTMIRGCSENNALEEAIL 178

Query: 346 LYSKMLRTDVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYC 167
            Y  M++ DV+P+NFT+PSVFKAC+ + A+K+GEQ+HTHV+K G +S   V++S+I MY 
Sbjct: 179 FYCTMVQEDVQPNNFTFPSVFKACNGIKALKEGEQVHTHVIKHGLMSYGHVHSSMIQMYG 238

Query: 166 KCSCIWSAHRVLDEMQDRDEVSWNSIISGYVQWGEIENARELFEAMPIR 20
            C  + +A R+ D + + D VSWN +I  +++ GE+E A+ELF+ MP R
Sbjct: 239 SCGQLPNARRLFDRIHEPDVVSWNCLIDSHLKNGELEEAKELFQNMPFR 287


>ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  149 bits (376), Expect = 6e-34
 Identities = 73/152 (48%), Positives = 100/152 (65%)
 Frame = -1

Query: 457 IDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKA 278
           +++A  VFD+IP P  Y +N++ RGY      ++ +F+YS+ML   V P+ FTYP + +A
Sbjct: 70  LNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRA 129

Query: 277 CSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSW 98
           C I  AI++G+QIH HV+KFGF +D F  N+LI MY     +  A RV D M  RD VSW
Sbjct: 130 CCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSW 189

Query: 97  NSIISGYVQWGEIENARELFEAMPIRRNVVCW 2
            S+I+GY QWG ++ ARE+FE MP  RN V W
Sbjct: 190 TSLITGYSQWGFVDKAREVFELMP-ERNSVSW 220



 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 50/143 (34%), Positives = 78/143 (54%)
 Frame = -1

Query: 457 IDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKA 278
           +D AR VF+ +P     SWN++I  Y  +    ++  L+ +M   +V    F   S+  A
Sbjct: 202 VDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSA 261

Query: 277 CSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSW 98
           C+ L A++QG+ IH ++ K G   D  +  ++IDMYCKC C+  A  V +E+  +   SW
Sbjct: 262 CTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSW 321

Query: 97  NSIISGYVQWGEIENARELFEAM 29
           N +I G    G+ E A ELF+ M
Sbjct: 322 NCMIGGLAMHGKGEAAIELFKEM 344


>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  145 bits (367), Expect = 7e-33
 Identities = 67/153 (43%), Positives = 103/153 (67%)
 Frame = -1

Query: 460 SIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFK 281
           S+ +AR VFD+I  P  + WN++IRGY+ +  P+++L LY  ML   V  + +T+P + K
Sbjct: 67  SLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLK 126

Query: 280 ACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVS 101
           ACS + A+++ +QIH H++K GF S+++  NSL+++Y K   I SA  + D++  RD VS
Sbjct: 127 ACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVS 186

Query: 100 WNSIISGYVQWGEIENARELFEAMPIRRNVVCW 2
           WNS+I GY + GEIE A E+F  MP  RN++ W
Sbjct: 187 WNSMIDGYTKCGEIEMAYEIFNHMP-ERNIISW 218



 Score = 82.4 bits (202), Expect = 9e-14
 Identities = 46/143 (32%), Positives = 71/143 (49%)
 Frame = -1

Query: 457 IDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKA 278
           I+ A  +F+ +P     SW S+I G    G P+++L L+ +M    +K  N    S  +A
Sbjct: 200 IEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQA 259

Query: 277 CSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSW 98
           C+ L  + QG+ IH ++ K     D  +   LIDMY KC  +  A  V  +M+++    W
Sbjct: 260 CADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVW 319

Query: 97  NSIISGYVQWGEIENARELFEAM 29
            ++ISGY   G    A E F  M
Sbjct: 320 TAMISGYAIHGRGREALEWFMKM 342


>ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522763|gb|AET03217.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  145 bits (365), Expect = 1e-32
 Identities = 72/205 (35%), Positives = 116/205 (56%), Gaps = 4/205 (1%)
 Frame = -1

Query: 604 LKRLTPSMLLPLLRSSVNLTXXXXXXXXXXXHGFPHHNHLLAKLVD----LRSIDHARAV 437
           ++R+     + LLRS  N             HG  H++ +    +      + I HAR +
Sbjct: 7   VQRIVEEKFITLLRSCKNYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKL 66

Query: 436 FDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKACSILDAI 257
           FD+IP P   +WN++ RGY  NG  +D++ L+ ++ R    P+ FT+P + K+C  L+ +
Sbjct: 67  FDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGV 126

Query: 256 KQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSWNSIISGY 77
           ++GE++H    K GF S+ FV  SLIDMY K  C+  A++V  EM +R+ V W +II+GY
Sbjct: 127 REGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGY 186

Query: 76  VQWGEIENARELFEAMPIRRNVVCW 2
           +  G++ + R LF+  P  R+VV W
Sbjct: 187 ILCGDVVSGRRLFDLAP-ERDVVMW 210



 Score =  102 bits (254), Expect = 9e-20
 Identities = 54/138 (39%), Positives = 80/138 (57%), Gaps = 1/138 (0%)
 Frame = -1

Query: 439 VFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKML-RTDVKPSNFTYPSVFKACSILD 263
           VFD++P    +SWN LI GY  NG   ++L  + +ML    V P++FT  +V  ACS L 
Sbjct: 260 VFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLG 319

Query: 262 AIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSWNSIIS 83
           A+  G+ +H +    G+  +LFV N LIDMY KC  I +A  V + +  +D +SWN+II+
Sbjct: 320 ALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIIN 379

Query: 82  GYVQWGEIENARELFEAM 29
           G    G   +A  +F+ M
Sbjct: 380 GLAIHGHAPDALGMFDRM 397


>emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  144 bits (364), Expect = 2e-32
 Identities = 66/158 (41%), Positives = 99/158 (62%)
 Frame = -1

Query: 475 LVDLRSIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTY 296
           L D  S+ +AR VF+QIP+PT ++ NS+IRGYT    P+ ++  Y  M+   + P  FT+
Sbjct: 22  LHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTF 81

Query: 295 PSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQD 116
           PS+FK+C +L    +G+Q+H H  K GF SD ++ N+L++MY  C C+ SA +V D+M +
Sbjct: 82  PSLFKSCGVLC---EGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVN 138

Query: 115 RDEVSWNSIISGYVQWGEIENARELFEAMPIRRNVVCW 2
           +  VSW ++I  Y QW     A +LF  M I  N+ CW
Sbjct: 139 KSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCW 176



 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 42/127 (33%), Positives = 72/127 (56%)
 Frame = -1

Query: 409 YSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKACSILDAIKQGEQIHTH 230
           + WN +I G+  +   +++L L+++M  + VK    T  S+  AC+ L A++ G+ +H +
Sbjct: 174 FCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVY 233

Query: 229 VVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSWNSIISGYVQWGEIENA 50
           + K     D+ +  +L+DMY KC  I SA RV  EM ++D ++W ++I G    G+   A
Sbjct: 234 IEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKA 293

Query: 49  RELFEAM 29
            ELF  M
Sbjct: 294 LELFHEM 300


>emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  144 bits (363), Expect = 2e-32
 Identities = 67/153 (43%), Positives = 102/153 (66%)
 Frame = -1

Query: 460 SIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFK 281
           S+ +AR VFD+I  P  + WN++IRGY+ +  P+++L LY  ML   V  + +T+P + K
Sbjct: 67  SLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLK 126

Query: 280 ACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVS 101
           ACS + A ++ +QIH H++K GF S+++  NSL+++Y K   I SA  + D++  RD VS
Sbjct: 127 ACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVS 186

Query: 100 WNSIISGYVQWGEIENARELFEAMPIRRNVVCW 2
           WNS+I GY + GEIE A E+F  MP  RN++ W
Sbjct: 187 WNSMIDGYTKCGEIEMAYEIFNHMP-ERNIISW 218



 Score = 82.4 bits (202), Expect = 9e-14
 Identities = 46/143 (32%), Positives = 71/143 (49%)
 Frame = -1

Query: 457 IDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKA 278
           I+ A  +F+ +P     SW S+I G    G P+++L L+ +M    +K  N    S  +A
Sbjct: 200 IEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQA 259

Query: 277 CSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSW 98
           C+ L  + QG+ IH ++ K     D  +   LIDMY KC  +  A  V  +M+++    W
Sbjct: 260 CADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVW 319

Query: 97  NSIISGYVQWGEIENARELFEAM 29
            ++ISGY   G    A E F  M
Sbjct: 320 TAMISGYAIHGRGREALEWFMKM 342


>emb|CBI17453.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  144 bits (362), Expect = 3e-32
 Identities = 77/209 (36%), Positives = 115/209 (55%), Gaps = 7/209 (3%)
 Frame = -1

Query: 607 QLKRLTPSMLLPLLRSSVNLTXXXXXXXXXXXHGFPHHNHLLAKLV------DLRSIDHA 446
           Q +++  S L+ +L    ++             G      +LAKL+      D+    + 
Sbjct: 33  QEQKILESRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYP 92

Query: 445 RAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKACSIL 266
           R VF Q+  P  + W +LIRGY L G   +S+ LY+ M R  + P +FT+ ++ KACS  
Sbjct: 93  RLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAA 152

Query: 265 DAIKQGEQIHTHVVKFG-FLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSWNSI 89
             +  G Q+HT  +  G F SDL+V N+LIDMY KC C+   HRV DEM DRD +SW S+
Sbjct: 153 LDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSL 212

Query: 88  ISGYVQWGEIENARELFEAMPIRRNVVCW 2
           I  Y + G +E A ELF+ +P+ +++V W
Sbjct: 213 IVAYAKVGNMEAASELFDGLPM-KDMVAW 240


>ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score =  144 bits (362), Expect = 3e-32
 Identities = 77/209 (36%), Positives = 115/209 (55%), Gaps = 7/209 (3%)
 Frame = -1

Query: 607 QLKRLTPSMLLPLLRSSVNLTXXXXXXXXXXXHGFPHHNHLLAKLV------DLRSIDHA 446
           Q +++  S L+ +L    ++             G      +LAKL+      D+    + 
Sbjct: 33  QEQKILESRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYP 92

Query: 445 RAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKACSIL 266
           R VF Q+  P  + W +LIRGY L G   +S+ LY+ M R  + P +FT+ ++ KACS  
Sbjct: 93  RLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAA 152

Query: 265 DAIKQGEQIHTHVVKFG-FLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSWNSI 89
             +  G Q+HT  +  G F SDL+V N+LIDMY KC C+   HRV DEM DRD +SW S+
Sbjct: 153 LDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSL 212

Query: 88  ISGYVQWGEIENARELFEAMPIRRNVVCW 2
           I  Y + G +E A ELF+ +P+ +++V W
Sbjct: 213 IVAYAKVGNMEAASELFDGLPM-KDMVAW 240



 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 2/155 (1%)
 Frame = -1

Query: 487 LLAKLVDLRSIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPS 308
           L+     + +++ A  +FD +P     +W +++ GY  N  P+++L ++ +M    VK  
Sbjct: 212 LIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTD 271

Query: 307 NFTYPSVFKACSILDAIKQGEQIHTHVVKFGF--LSDLFVNNSLIDMYCKCSCIWSAHRV 134
             T   V  AC+ L A K    +     + GF   S++ V ++LIDMY KC  +  A++V
Sbjct: 272 EVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKV 331

Query: 133 LDEMQDRDEVSWNSIISGYVQWGEIENARELFEAM 29
            + M++R+  S++S+I G+   G    A ELF+ M
Sbjct: 332 FERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEM 366



 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 24/74 (32%), Positives = 48/74 (64%)
 Frame = -1

Query: 460 SIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFK 281
           S++ A  VF+++     YS++S+I G+ ++G    ++ L+ +ML+T++KP+  T+  V  
Sbjct: 324 SVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLT 383

Query: 280 ACSILDAIKQGEQI 239
           ACS    ++QG+Q+
Sbjct: 384 ACSHAGMVEQGQQL 397


>ref|XP_006446854.1| hypothetical protein CICLE_v10018065mg [Citrus clementina]
           gi|557549465|gb|ESR60094.1| hypothetical protein
           CICLE_v10018065mg [Citrus clementina]
          Length = 438

 Score =  142 bits (358), Expect = 8e-32
 Identities = 80/196 (40%), Positives = 112/196 (57%), Gaps = 4/196 (2%)
 Frame = -1

Query: 577 LPLLRSSVNLTXXXXXXXXXXXHGFPHHNHLLAKLVDLRSI----DHARAVFDQIPSPTD 410
           L LLR   N             HG  +   L+ KL+DL S     DHA  VF QI  P  
Sbjct: 34  LVLLRKCRNFGQLKLIHAKIIRHGLSNDQLLVRKLLDLCSFYGKTDHALLVFSQIQCPHV 93

Query: 409 YSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKACSILDAIKQGEQIHTH 230
           ++WN +IR  T+NGS + +L LY+ M+    +P  FT+P VFKAC    AI++G+++H  
Sbjct: 94  FTWNLMIRALTINGSSRQALLLYNLMICNGFRPDKFTFPFVFKACITSLAIEKGKEVHGL 153

Query: 229 VVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSWNSIISGYVQWGEIENA 50
            VK GF  D+FV N+L+D+Y KC  +    +V D+M+ R  VSW ++ISG    G+++ A
Sbjct: 154 AVKAGFSRDMFVQNTLMDLYFKCGDVNGGRKVFDKMRVRSVVSWTTMISGLAASGDLDAA 213

Query: 49  RELFEAMPIRRNVVCW 2
           R +FE M   RNVV W
Sbjct: 214 RRVFEQMQ-TRNVVSW 228



 Score =  101 bits (252), Expect = 1e-19
 Identities = 51/153 (33%), Positives = 87/153 (56%)
 Frame = -1

Query: 487 LLAKLVDLRSIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPS 308
           +++ L     +D AR VF+Q+ +    SW ++I  Y  N    ++  L+ +ML  +V+P+
Sbjct: 200 MISGLAASGDLDAARRVFEQMQTRNVVSWTAMINAYVRNERAHEAFELFQRMLLDNVRPN 259

Query: 307 NFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLD 128
            FT  S+ +AC+ L ++K G  IH   +K GF+  +++  +LIDMY KC  +  A +V D
Sbjct: 260 EFTLVSLLQACTELGSLKLGNWIHDFALKNGFVLGVYLGTALIDMYSKCGSLEDARKVFD 319

Query: 127 EMQDRDEVSWNSIISGYVQWGEIENARELFEAM 29
           +M+ ++  +WNS+I+     G  E A  LF  M
Sbjct: 320 KMEIKNLATWNSMITSLGVHGHGEEALALFAQM 352


>ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like isoform X1 [Citrus sinensis]
           gi|568829286|ref|XP_006468954.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like isoform X2 [Citrus sinensis]
           gi|568829288|ref|XP_006468955.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 435

 Score =  140 bits (353), Expect = 3e-31
 Identities = 80/196 (40%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
 Frame = -1

Query: 577 LPLLRSSVNLTXXXXXXXXXXXHGFPHHNHLLAKLVDLRSI----DHARAVFDQIPSPTD 410
           L LLR   N             HG  +   L+ KL+DL S     DHA  VF QI  P  
Sbjct: 34  LVLLRKCRNFGQLKLIHAKIIRHGLSNDQLLVRKLLDLCSFYGKTDHALLVFSQIQCPHV 93

Query: 409 YSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKACSILDAIKQGEQIHTH 230
           ++WN +IR  T+NGS Q +L LY+ M+    +P  FT+P V KAC    AI++G+++H  
Sbjct: 94  FTWNLMIRALTINGSSQQALLLYNLMICNGFRPDKFTFPFVIKACVASLAIEKGKEVHGL 153

Query: 229 VVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSWNSIISGYVQWGEIENA 50
            VK GF  D+FV N+L+D+Y KC  +     V D+M+ R  VSW ++ISG    G+++ A
Sbjct: 154 AVKAGFSRDMFVQNTLMDLYFKCGDVDGGRMVFDKMRVRSVVSWTTMISGLAASGDLDAA 213

Query: 49  RELFEAMPIRRNVVCW 2
           R +FE M   RNVV W
Sbjct: 214 RRVFEQMQ-TRNVVSW 228



 Score =  103 bits (256), Expect = 5e-20
 Identities = 52/153 (33%), Positives = 88/153 (57%)
 Frame = -1

Query: 487 LLAKLVDLRSIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPS 308
           +++ L     +D AR VF+Q+ +    SW ++I  Y  N   Q++  L+ +ML  +V+P+
Sbjct: 200 MISGLAASGDLDAARRVFEQMQTRNVVSWTAMINAYVRNERAQEAFELFQRMLLDNVRPN 259

Query: 307 NFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLD 128
            FT  S+ +AC+ L ++K G  IH   +K GF+  +++  +LIDMY KC  +  A +V D
Sbjct: 260 EFTLVSLLQACTELRSLKLGNWIHDFALKNGFVLGVYLGTALIDMYSKCGSLEDARKVFD 319

Query: 127 EMQDRDEVSWNSIISGYVQWGEIENARELFEAM 29
           +M+ ++  +WNS+I+     G  E A  LF  M
Sbjct: 320 KMEIKNLATWNSMITSLGVHGHGEEALALFAQM 352


>ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240430|gb|ABD32288.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355486783|gb|AES67986.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  139 bits (351), Expect = 5e-31
 Identities = 72/164 (43%), Positives = 98/164 (59%), Gaps = 4/164 (2%)
 Frame = -1

Query: 508 GFPHHNHLLAKLVDLRSIDH----ARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLY 341
           G  ++  L  KLV L ++ +    AR +FD+IP    + WN LIRGY  NG   +++ LY
Sbjct: 77  GIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILY 136

Query: 340 SKMLRTDVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKC 161
            KML   ++P NFT P V KACS L AI +G  IH +V+K G+  DLFV  +LIDMY KC
Sbjct: 137 HKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKC 196

Query: 160 SCIWSAHRVLDEMQDRDEVSWNSIISGYVQWGEIENARELFEAM 29
            C+  A RV D++  RD V WNS+++ Y Q G  + +  L   M
Sbjct: 197 GCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREM 240



 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
 Frame = -1

Query: 481 AKLVDLRS----IDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVK 314
           A L+D+ +    +  A  VFD+I       WNS++  Y  NG P +S+ L  +M    V+
Sbjct: 187 AALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVR 246

Query: 313 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRV 134
           P+  T  +V  + + +  +  G +IH    + GF S+  V  +LIDMY KC  +  A  +
Sbjct: 247 PTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALAL 306

Query: 133 LDEMQDRDEVSWNSIISGYVQWGEIENARELFEAM 29
            + ++++  VSWN+II+GY   G    A +LF+ M
Sbjct: 307 FERLREKRVVSWNAIITGYAMHGLAVGALDLFDKM 341



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 40/166 (24%), Positives = 81/166 (48%), Gaps = 6/166 (3%)
 Frame = -1

Query: 508 GFPHHNHLLAKLVDLR----SIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLY 341
           GF  ++ +   L+D+     S+  A A+F+++      SWN++I GY ++G    +L L+
Sbjct: 279 GFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLF 338

Query: 340 SKMLRTDVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVK-FGFLSDLFVNNSLIDMYCK 164
            KM + D +P + T+  V  ACS    + +G  ++  +V+ +G    +     +ID+   
Sbjct: 339 DKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGH 397

Query: 163 CSCIWSAHRVLDEMQDR-DEVSWNSIISGYVQWGEIENARELFEAM 29
           C  +  A+ ++  M  + D   W ++++     G +E A    E +
Sbjct: 398 CGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKL 443


>ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
           gi|241930650|gb|EES03795.1| hypothetical protein
           SORBIDRAFT_03g037910 [Sorghum bicolor]
          Length = 894

 Score =  139 bits (351), Expect = 5e-31
 Identities = 72/192 (37%), Positives = 107/192 (55%), Gaps = 5/192 (2%)
 Frame = -1

Query: 589 PSMLLPLLRSSVNLTXXXXXXXXXXXHGFPHHNHLLAKLVDLRSIDH-----ARAVFDQI 425
           P + L + RS V +             G  +  + ++K++   ++       A  VF+QI
Sbjct: 311 PGLALVVTRSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQI 370

Query: 424 PSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKACSILDAIKQGE 245
            SPT + WN+L+RG   + +P+D++  Y K     +KP N T+P V KAC+   A K+GE
Sbjct: 371 ESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGE 430

Query: 244 QIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSWNSIISGYVQWG 65
           Q+H+HV+K GFL D+FV+NSLI +Y  C  +  A  + DEM  +D VSWNS+I GY Q  
Sbjct: 431 QMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRN 490

Query: 64  EIENARELFEAM 29
             +    LFE M
Sbjct: 491 RFKEVLALFELM 502



 Score =  106 bits (265), Expect = 5e-21
 Identities = 56/140 (40%), Positives = 81/140 (57%)
 Frame = -1

Query: 448  ARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKACSI 269
            A+ +FDQIP+    SW+S+I  Y+      DSL L+ +M R  VKP      SV  AC+ 
Sbjct: 596  AKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAH 655

Query: 268  LDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSWNSI 89
            L A+  G+ IH +V +    +D  + NSLIDM+ KC C+  A +V  EM+++D +SWNSI
Sbjct: 656  LGALDLGKWIHDYVRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEEKDTLSWNSI 715

Query: 88   ISGYVQWGEIENARELFEAM 29
            I G    G  + A  +F +M
Sbjct: 716  ILGLANNGFEDEALNIFYSM 735



 Score =  103 bits (256), Expect = 5e-20
 Identities = 60/144 (41%), Positives = 81/144 (56%), Gaps = 1/144 (0%)
 Frame = -1

Query: 457 IDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKA 278
           I++AR +FDQ+P     SW  LI GYT      +++ L+  M+   + PS  T  +V  A
Sbjct: 22  IEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGISPSEITVLAVVPA 81

Query: 277 CSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQD-RDEVS 101
            S L  I  GE +H + VK G +SD  V NSLID+Y K   + ++ +V DEM D R+ VS
Sbjct: 82  ISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVS 141

Query: 100 WNSIISGYVQWGEIENARELFEAM 29
           W SIISG+   G    A ELF  M
Sbjct: 142 WTSIISGFAMHGLSVEALELFAEM 165



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 47/163 (28%), Positives = 89/163 (54%)
 Frame = -1

Query: 490 HLLAKLVDLRSIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKP 311
           HL A   DL     AR++FD++      SWNSLI GY+     ++ L L+  M   +V+ 
Sbjct: 453 HLYAACGDLVC---ARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQA 509

Query: 310 SNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVL 131
              T   V  AC+ L      + +  ++ +     D+++ N+LID YC+   + SA +V 
Sbjct: 510 DKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVF 569

Query: 130 DEMQDRDEVSWNSIISGYVQWGEIENARELFEAMPIRRNVVCW 2
            +M+D++ V+ N++I  Y + G + +A+++F+ +P  ++++ W
Sbjct: 570 SQMKDKNTVTLNAMIHAYAKGGNLVSAKKIFDQIP-NKDLISW 611



 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 34/149 (22%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
 Frame = -1

Query: 493 NHLLAKLVDLRSIDHARAVFDQIPSPTDY-SWNSLIRGYTLNGSPQDSLFLYSKMLRTDV 317
           N L+     + S+ ++  VFD++    +  SW S+I G+ ++G   ++L L+++M R  +
Sbjct: 111 NSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGI 170

Query: 316 KPSNFTYPSVFKACSILDAIKQGEQIHTHVV-KFGFLSDLFVNNSLIDMYCKCSCIWSAH 140
           +P+  T+ SV  ACS    ++QG      +V ++    ++     +IDM  +   +  A 
Sbjct: 171 RPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAE 230

Query: 139 RVLDEMQ-DRDEVSWNSIISGYVQWGEIE 56
           ++++ +  + + + W  ++    ++GE+E
Sbjct: 231 QIIEGLPVEVNVIVWRILLGCCSKYGEVE 259


>ref|XP_006646428.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Oryza brachyantha]
          Length = 1035

 Score =  138 bits (348), Expect = 1e-30
 Identities = 65/140 (46%), Positives = 87/140 (62%)
 Frame = -1

Query: 448 ARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKACSI 269
           A  VFDQI  PT + WN +IRG   + +P D++  Y K  R  + P N T+P + KAC+ 
Sbjct: 509 AHKVFDQIEGPTTFYWNIIIRGLAQSNAPADAIAFYKKAQRGGMVPDNLTFPFILKACAG 568

Query: 268 LDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSWNSI 89
           + A+K+GEQIH H++K G L D+FV+NSLI +Y  C  I  A  V DEM  +D VSWNS+
Sbjct: 569 ISALKEGEQIHDHIMKLGLLQDIFVSNSLIHLYAACGNICYARSVFDEMSVKDVVSWNSL 628

Query: 88  ISGYVQWGEIENARELFEAM 29
           I GY Q    ++   LFE M
Sbjct: 629 ICGYSQCNRFKDVLALFELM 648



 Score = 99.8 bits (247), Expect = 6e-19
 Identities = 55/155 (35%), Positives = 84/155 (54%)
 Frame = -1

Query: 493  NHLLAKLVDLRSIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVK 314
            N ++      R +  AR +FDQIP     SW+S+I GY+      D+L ++ +M R  VK
Sbjct: 727  NAMITAYAKGRDLLSARKIFDQIPKKDLISWSSMISGYSQADHFSDALEIFRQMQRAKVK 786

Query: 313  PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRV 134
            P      SV  +C+ L A+  G+ +H +V +    +D+ + NSLI MY KC     A +V
Sbjct: 787  PDAIVIASVLSSCAHLGALDLGKWVHDYVRRNIIKADIVMENSLIYMYMKCGSTKEAFQV 846

Query: 133  LDEMQDRDEVSWNSIISGYVQWGEIENARELFEAM 29
              EM+++D +SWNS+I G    G   ++  LF AM
Sbjct: 847  FKEMKEKDTLSWNSMIIGLANNGFEVDSLNLFHAM 881



 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 58/177 (32%), Positives = 96/177 (54%), Gaps = 10/177 (5%)
 Frame = -1

Query: 502 PHHNHLLAKLVD----------LRSIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDS 353
           PH   L+A LV+          + S   A  VFD+ P+P    W++L++ Y+     Q++
Sbjct: 23  PHARLLVALLVEHQDRRRLLLQIHSQLIAHQVFDRRPTP----WHALLKAYSHGPFLQEA 78

Query: 352 LFLYSKMLRTDVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDM 173
           L L+ +  +       + +    KAC+ L   + G Q+H  V++ GF    +V+ +++++
Sbjct: 79  LQLF-RYAQWHAADDTYAFTFALKACAGLGWPRAGAQLHGLVIRKGFEFHTYVHTAVVNV 137

Query: 172 YCKCSCIWSAHRVLDEMQDRDEVSWNSIISGYVQWGEIENARELFEAMPIRRNVVCW 2
           Y  C C+  A  V +EM  ++ VSWN +I+G+  WGE+E AR LFE MP  RNV+ W
Sbjct: 138 YVVCGCLVDAQIVFEEMPVKNAVSWNVVITGFAAWGEVEYARLLFEQMPC-RNVISW 193



 Score = 95.9 bits (237), Expect = 8e-18
 Identities = 56/144 (38%), Positives = 81/144 (56%), Gaps = 1/144 (0%)
 Frame = -1

Query: 457 IDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKA 278
           +++AR +F+Q+P     SW+ +I GYT      +++ L+  M+   + PS  T  +V  A
Sbjct: 175 VEYARLLFEQMPCRNVISWSGMIDGYTRACCFVEAVALFRHMMAEGIHPSEITVLAVVPA 234

Query: 277 CSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQD-RDEVS 101
            S +  I  GE +H +  K G + D+ V NSLID+Y K   I ++ RV DEM D R+ VS
Sbjct: 235 LSNIGKILMGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNLVS 294

Query: 100 WNSIISGYVQWGEIENARELFEAM 29
           W SIISG+   G    A ELF  M
Sbjct: 295 WTSIISGFAMHGLSSKAVELFADM 318



 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 48/164 (29%), Positives = 91/164 (55%)
 Frame = -1

Query: 493  NHLLAKLVDLRSIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVK 314
            N L+       +I +AR+VFD++      SWNSLI GY+     +D L L+  M    VK
Sbjct: 595  NSLIHLYAACGNICYARSVFDEMSVKDVVSWNSLICGYSQCNRFKDVLALFELMHNEGVK 654

Query: 313  PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRV 134
                T   V  AC+ L    + + +  ++  +    D+++ N+LID Y +   + SA +V
Sbjct: 655  ADKVTMVKVVSACTRLGKYSRADCMVRYIEDYCIEVDIYLGNTLIDYYGRRGQLQSAEKV 714

Query: 133  LDEMQDRDEVSWNSIISGYVQWGEIENARELFEAMPIRRNVVCW 2
              +M+DR+ V+ N++I+ Y +  ++ +AR++F+ +P +++++ W
Sbjct: 715  FFDMKDRNIVTMNAMITAYAKGRDLLSARKIFDQIP-KKDLISW 757



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 35/149 (23%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
 Frame = -1

Query: 493 NHLLAKLVDLRSIDHARAVFDQIPSPTDY-SWNSLIRGYTLNGSPQDSLFLYSKMLRTDV 317
           N L+     + SI ++  VFD++    +  SW S+I G+ ++G    ++ L++ M R  +
Sbjct: 264 NSLIDLYAKIGSIQNSLRVFDEMLDRRNLVSWTSIISGFAMHGLSSKAVELFADMRRVGI 323

Query: 316 KPSNFTYPSVFKACSILDAIKQGEQ-IHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAH 140
           +P+  T+ SV  ACS    ++QG    ++ V ++    ++     +IDM  +  C+  A 
Sbjct: 324 RPNRITFLSVLNACSHGGLVEQGVAFFNSMVYEYNINPEIKHFGCIIDMLGRAGCLCEAE 383

Query: 139 RVLDEMQDRDEVS-WNSIISGYVQWGEIE 56
            ++ ++     V+ W +++    ++GE++
Sbjct: 384 HIIGDLPMEINVTVWRTLLGCCSKYGEVD 412


>ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513376|gb|AES94999.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 518

 Score =  138 bits (348), Expect = 1e-30
 Identities = 71/208 (34%), Positives = 117/208 (56%), Gaps = 6/208 (2%)
 Frame = -1

Query: 607 QLKRLTPSMLLPLLRSSVNLTXXXXXXXXXXXHGFPHHNHLLAKLV------DLRSIDHA 446
           QL +L     + LL    N+             G   H   +++L+      +  ++ +A
Sbjct: 5   QLLQLNVEQTMSLLERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYA 64

Query: 445 RAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKACSIL 266
           R VFD+I SP    WN++IR Y+ +  P+++L LY +ML   +  + +T+P + KACS L
Sbjct: 65  RMVFDRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSAL 124

Query: 265 DAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSWNSII 86
            A+ +  QIH  ++K GF S+++  NSL+ +Y     I SAH + D +  RD VSWN++I
Sbjct: 125 SALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMI 184

Query: 85  SGYVQWGEIENARELFEAMPIRRNVVCW 2
            GY++ G +E A ++F+AMP  +NV+ W
Sbjct: 185 DGYIKCGNVEMAYKIFQAMP-EKNVISW 211



 Score = 82.4 bits (202), Expect = 9e-14
 Identities = 45/155 (29%), Positives = 78/155 (50%)
 Frame = -1

Query: 493 NHLLAKLVDLRSIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVK 314
           N ++   +   +++ A  +F  +P     SW S+I G+   G  +++L L  +ML   +K
Sbjct: 181 NTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIK 240

Query: 313 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRV 134
           P   T      AC+ L A++QG+ IHT++ K     D  +  +LIDMY KC  +  A  V
Sbjct: 241 PDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLV 300

Query: 133 LDEMQDRDEVSWNSIISGYVQWGEIENARELFEAM 29
             +++ +   +W +II G+   G+   A + F  M
Sbjct: 301 FSKLEKKCVYTWTAIIGGFAVHGKGSEALDWFTQM 335


>emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  138 bits (348), Expect = 1e-30
 Identities = 74/167 (44%), Positives = 100/167 (59%), Gaps = 7/167 (4%)
 Frame = -1

Query: 508 GFPHHNHLLAKLVDLR----SIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLY 341
           GF     +  KLV+L     S+  AR +FD+IP    + WN LIRGY  NG  + ++ LY
Sbjct: 105 GFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLY 164

Query: 340 SKMLRTDVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKC 161
            +M    + P NFT+P V KAC+ L AI+ G +IH HVV+ G+  D+FV  +LIDMY KC
Sbjct: 165 YQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKC 224

Query: 160 SCIWSAHRVLDEMQDRDE---VSWNSIISGYVQWGEIENARELFEAM 29
            C+ SA  V D++  RD    VSWN++I+GY   G    A +LFE M
Sbjct: 225 GCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEM 271



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 32/99 (32%), Positives = 50/99 (50%)
 Frame = -1

Query: 325 TDVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWS 146
           T + P+   Y S+ ++C    AIK G+Q+H  V   GF  D  +   L+++YC C  + S
Sbjct: 69  TCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSS 128

Query: 145 AHRVLDEMQDRDEVSWNSIISGYVQWGEIENARELFEAM 29
           A  + D +   +   WN +I GY   G  E A +L+  M
Sbjct: 129 ARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQM 167


>ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Vitis vinifera]
          Length = 539

 Score =  138 bits (348), Expect = 1e-30
 Identities = 74/203 (36%), Positives = 116/203 (57%), Gaps = 6/203 (2%)
 Frame = -1

Query: 592 TPSMLLPLLRSSVNLTXXXXXXXXXXXHGFPHHNHLLAKLVDLRSI------DHARAVFD 431
           T   L+ LL +  +++            G   H+   ++L+   +I      DH+  +F 
Sbjct: 11  TNQTLIALLENCRSMSEFKQIQAFFITSGLSQHHPFASRLLSFSAISSWGDIDHSYRIFL 70

Query: 430 QIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKACSILDAIKQ 251
           QIPSPT  +WNS+IRG++   +P  S+ ++ KMLR  V P + TYP + KA + L  ++ 
Sbjct: 71  QIPSPTISNWNSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFIAKAVARLSELRL 130

Query: 250 GEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSWNSIISGYVQ 71
              +H  + K G   D F+ NSLI MY  C  I SA +V DEM  R+ VSWN+++ GY +
Sbjct: 131 ALAVHCRIAKEGLWFDRFIANSLIHMYGSCGDIGSARKVFDEMLIRNSVSWNAMLDGYAK 190

Query: 70  WGEIENARELFEAMPIRRNVVCW 2
            G++++AR++FE+MP  R+VV W
Sbjct: 191 CGDLDSARQVFESMP-DRDVVSW 212



 Score = 82.8 bits (203), Expect = 7e-14
 Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
 Frame = -1

Query: 493 NHLLAKLVDLRSIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVK 314
           N +L        +D AR VF+ +P     SW+S+I G    G    +L ++ +M     K
Sbjct: 182 NAMLDGYAKCGDLDSARQVFESMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPK 241

Query: 313 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRV 134
            +  T  SV  AC+ L A++QG  +H ++V       L +  SL+DMY KC  I  A  V
Sbjct: 242 ANEVTMVSVLCACAHLGALEQGRTMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAIAV 301

Query: 133 LD--EMQDRDEVSWNSIISGYVQWGEIENARELFEAMPI 23
                M   D + WN+II G    G +  + ELF+ M +
Sbjct: 302 FRGVPMDQTDVLMWNTIIGGLATHGLVHESLELFKEMQV 340


>ref|XP_004486752.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cicer arietinum]
          Length = 615

 Score =  138 bits (347), Expect = 1e-30
 Identities = 70/164 (42%), Positives = 100/164 (60%), Gaps = 4/164 (2%)
 Frame = -1

Query: 508 GFPHHNHLLAKLVDLRSIDH----ARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLY 341
           G P++ +L  KLV L S+ +    A  +FD+IP    + WN LIRGY  NG    ++ LY
Sbjct: 72  GLPYNQNLATKLVHLYSVSNSLINAHNLFDKIPKGNLFLWNVLIRGYAWNGPHDAAISLY 131

Query: 340 SKMLRTDVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKC 161
             ML  ++KP NFT P V KACS L A+ +G++IH +V+K G+  D+FV  +LIDMY KC
Sbjct: 132 HDMLDYELKPDNFTLPFVLKACSALSAVGEGKRIHEYVIKNGWERDVFVGAALIDMYAKC 191

Query: 160 SCIWSAHRVLDEMQDRDEVSWNSIISGYVQWGEIENARELFEAM 29
            C+  A  V D++  RD+V WNS+++ Y Q G  + +  L   M
Sbjct: 192 GCVIDARYVFDKILVRDDVLWNSMLAAYAQNGHPDESLSLCREM 235



 Score =  101 bits (252), Expect = 1e-19
 Identities = 56/155 (36%), Positives = 85/155 (54%), Gaps = 4/155 (2%)
 Frame = -1

Query: 481 AKLVDLRS----IDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVK 314
           A L+D+ +    +  AR VFD+I    D  WNS++  Y  NG P +SL L  +M  T V+
Sbjct: 182 AALIDMYAKCGCVIDARYVFDKILVRDDVLWNSMLAAYAQNGHPDESLSLCREMAATGVR 241

Query: 313 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRV 134
           P+  T  +V  + + +  +  G +IH    K GF S+  V  +LIDMY KC  +  A  +
Sbjct: 242 PTEATLVTVISSSADIACLPNGREIHGFSWKHGFQSNDKVKTALIDMYAKCGYVKVARAL 301

Query: 133 LDEMQDRDEVSWNSIISGYVQWGEIENARELFEAM 29
            D ++++  +SWN+II+GY   G    A +LFE M
Sbjct: 302 FDRLREKRVISWNAIITGYAMHGLAVEALDLFEEM 336


>ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citrus clementina]
           gi|568824869|ref|XP_006466814.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Citrus sinensis]
           gi|557527644|gb|ESR38894.1| hypothetical protein
           CICLE_v10025166mg [Citrus clementina]
          Length = 622

 Score =  137 bits (346), Expect = 2e-30
 Identities = 65/153 (42%), Positives = 97/153 (63%)
 Frame = -1

Query: 460 SIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFK 281
           S+ +A+ VFD+I  P  + WN+++RGY  +  P+ +L LY +ML   V  + +T+P + K
Sbjct: 67  SLAYAQMVFDRIIKPNTFMWNTMVRGYADSSEPEQALLLYRQMLSHSVSHNAYTFPFLLK 126

Query: 280 ACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVS 101
           ACS L A+++ +QIH  ++KFGF S++F  NSL+  Y     I SA  + D M  RD VS
Sbjct: 127 ACSRLSALEETQQIHAQIIKFGFSSEVFATNSLLHAYAISGSIKSARLIFDHMPQRDTVS 186

Query: 100 WNSIISGYVQWGEIENARELFEAMPIRRNVVCW 2
           WNS+I GY + GE+E A E F+ M   +NV+ W
Sbjct: 187 WNSMIDGYTKCGEMELACEFFKDMK-EKNVISW 218



 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 54/190 (28%), Positives = 75/190 (39%), Gaps = 31/190 (16%)
 Frame = -1

Query: 493 NHLLAKLVDLRSIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQ--------------- 359
           N LL       SI  AR +FD +P     SWNS+I GYT  G  +               
Sbjct: 157 NSLLHAYAISGSIKSARLIFDHMPQRDTVSWNSMIDGYTKCGEMELACEFFKDMKEKNVI 216

Query: 358 ----------------DSLFLYSKMLRTDVKPSNFTYPSVFKACSILDAIKQGEQIHTHV 227
                           ++L L+ +M    VKP N    S   AC+ L A+ QG  I  ++
Sbjct: 217 SWTTLISGYVGAGMDKEALHLFHEMQTAGVKPDNVALVSAVSACAHLGALDQGRWIDEYI 276

Query: 226 VKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSWNSIISGYVQWGEIENAR 47
              G   D  +  +LIDMY KC  +  A  +   M+ +   +W +II G    G    A 
Sbjct: 277 KHLGIKIDPILGCALIDMYAKCGDLEEALELFKRMEKKGVSAWTAIIFGLAIHGHGREAL 336

Query: 46  ELFEAMPIRR 17
             F  M + R
Sbjct: 337 NWFSKMQVAR 346


>ref|XP_006360941.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Solanum tuberosum]
          Length = 536

 Score =  137 bits (345), Expect = 2e-30
 Identities = 68/198 (34%), Positives = 110/198 (55%), Gaps = 4/198 (2%)
 Frame = -1

Query: 583 MLLPLLRSSVNLTXXXXXXXXXXXHGFPHHNHLLAKLVDL----RSIDHARAVFDQIPSP 416
           M +P+L++  +                   ++L+ K+V++      I++A+ +F Q+  P
Sbjct: 16  MFIPVLKNCKSTVFLKKIHAQIVKFSLSQSSYLVTKMVEICDKNGEIEYAKLLFKQVEDP 75

Query: 415 TDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVKPSNFTYPSVFKACSILDAIKQGEQIH 236
            +Y +NS+IR YT        + +Y +M+   + P  +TYP V ++CS +  +  GEQ H
Sbjct: 76  NNYLYNSIIRAYTHKQRYISCINVYKQMMICTISPDEYTYPFVIRSCSAILRVDVGEQFH 135

Query: 235 THVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRVLDEMQDRDEVSWNSIISGYVQWGEIE 56
            HV KFG      + NSL+DMY KC  +  AH V DEM DRD +SWNS+I G+V+  ++ 
Sbjct: 136 VHVWKFGLYYSNVIANSLLDMYVKCDRMRDAHMVFDEMSDRDVISWNSLICGHVRLRQVR 195

Query: 55  NARELFEAMPIRRNVVCW 2
            AR LF+ MP  +++V W
Sbjct: 196 KARALFDVMP-DKSIVSW 212



 Score =  111 bits (277), Expect = 2e-22
 Identities = 56/155 (36%), Positives = 90/155 (58%)
 Frame = -1

Query: 493 NHLLAKLVDLRSIDHARAVFDQIPSPTDYSWNSLIRGYTLNGSPQDSLFLYSKMLRTDVK 314
           N L+   V LR +  ARA+FD +P  +  SW ++I GYT  G   D+L ++ +M    VK
Sbjct: 182 NSLICGHVRLRQVRKARALFDVMPDKSIVSWTAMISGYTKTGCYGDALDVFRRMQMVGVK 241

Query: 313 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCSCIWSAHRV 134
           P   +  SV  AC+ L A++ G+ IH +  K+G+L    V N+L++MY KC  +  A ++
Sbjct: 242 PDWISLVSVLPACAQLGALELGKWIHFYAEKYGYLRKTSVCNALMEMYAKCGSVNEAWQL 301

Query: 133 LDEMQDRDEVSWNSIISGYVQWGEIENARELFEAM 29
            ++M +RD +SW+++I G    G  + A +LF  M
Sbjct: 302 FNQMSERDVISWSTMIGGLANHGRAQEALKLFHEM 336