BLASTX nr result

ID: Akebia27_contig00024555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00024555
         (885 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006393637.1| hypothetical protein EUTSA_v10011725mg [Eutr...    58   6e-06
ref|XP_007017246.1| Photosystem I light harvesting complex gene ...    58   6e-06
ref|XP_007017245.1| Light-harvesting complex I protein Lhca5 iso...    58   6e-06
ref|XP_006374944.1| chlorophyll A-B binding family protein [Popu...    57   7e-06

>ref|XP_006393637.1| hypothetical protein EUTSA_v10011725mg [Eutrema salsugineum]
           gi|557090215|gb|ESQ30923.1| hypothetical protein
           EUTSA_v10011725mg [Eutrema salsugineum]
          Length = 255

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +3

Query: 219 LCFFQLLRVTGISNLPVWYEAGAVKFEFASTRT 317
           + F  LLR TGISNLPVWYEAGAVKF+FAST+T
Sbjct: 102 ILFTDLLRTTGISNLPVWYEAGAVKFDFASTKT 134


>ref|XP_007017246.1| Photosystem I light harvesting complex gene 5 isoform 2, partial
           [Theobroma cacao] gi|508722574|gb|EOY14471.1|
           Photosystem I light harvesting complex gene 5 isoform 2,
           partial [Theobroma cacao]
          Length = 247

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +3

Query: 219 LCFFQLLRVTGISNLPVWYEAGAVKFEFASTRT 317
           + F  LLRVTGISNLPVWYEAGAVKF+FAST T
Sbjct: 111 ILFTDLLRVTGISNLPVWYEAGAVKFDFASTGT 143


>ref|XP_007017245.1| Light-harvesting complex I protein Lhca5 isoform 1 [Theobroma
           cacao] gi|508722573|gb|EOY14470.1| Light-harvesting
           complex I protein Lhca5 isoform 1 [Theobroma cacao]
          Length = 264

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +3

Query: 219 LCFFQLLRVTGISNLPVWYEAGAVKFEFASTRT 317
           + F  LLRVTGISNLPVWYEAGAVKF+FAST T
Sbjct: 111 ILFTDLLRVTGISNLPVWYEAGAVKFDFASTGT 143


>ref|XP_006374944.1| chlorophyll A-B binding family protein [Populus trichocarpa]
           gi|550323257|gb|ERP52741.1| chlorophyll A-B binding
           family protein [Populus trichocarpa]
          Length = 266

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = +3

Query: 219 LCFFQLLRVTGISNLPVWYEAGAVKFEFASTRT 317
           + F  LLRVTGI  LPVWYEAGAVKFEFASTRT
Sbjct: 113 ILFTDLLRVTGIRKLPVWYEAGAVKFEFASTRT 145


Top