BLASTX nr result
ID: Akebia27_contig00024063
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00024063
(400 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007042642.1| Radical SAM superfamily protein isoform 3 [T... 89 8e-16
ref|XP_007042640.1| Radical SAM superfamily protein isoform 1 [T... 89 8e-16
ref|XP_002265287.1| PREDICTED: ribosomal RNA large subunit methy... 87 3e-15
ref|XP_006486920.1| PREDICTED: uncharacterized protein LOC102607... 86 7e-15
ref|XP_006422823.1| hypothetical protein CICLE_v10028673mg [Citr... 84 2e-14
ref|XP_002300266.1| radical SAM domain-containing family protein... 82 8e-14
gb|EYU37568.1| hypothetical protein MIMGU_mgv1a008462mg [Mimulus... 82 1e-13
ref|XP_007157211.1| hypothetical protein PHAVU_002G051800g [Phas... 82 1e-13
gb|AFK36133.1| unknown [Medicago truncatula] 82 1e-13
ref|XP_003610615.1| Ribosomal RNA large subunit methyltransferas... 82 1e-13
ref|XP_004511313.1| PREDICTED: ribosomal RNA large subunit methy... 81 1e-13
gb|AFK48814.1| unknown [Lotus japonicus] 81 2e-13
ref|XP_004985297.1| PREDICTED: uncharacterized protein LOC101777... 80 3e-13
ref|XP_004136937.1| PREDICTED: dual-specificity RNA methyltransf... 79 6e-13
gb|EEC74707.1| hypothetical protein OsI_10424 [Oryza sativa Indi... 78 1e-12
ref|NP_001049302.1| Os03g0202300 [Oryza sativa Japonica Group] g... 78 1e-12
ref|XP_006649584.1| PREDICTED: uncharacterized protein LOC102709... 78 1e-12
ref|XP_006346301.1| PREDICTED: uncharacterized protein LOC102584... 78 1e-12
ref|XP_004230694.1| PREDICTED: ribosomal RNA large subunit methy... 78 1e-12
ref|XP_003558557.1| PREDICTED: ribosomal RNA large subunit methy... 78 1e-12
>ref|XP_007042642.1| Radical SAM superfamily protein isoform 3 [Theobroma cacao]
gi|508706577|gb|EOX98473.1| Radical SAM superfamily
protein isoform 3 [Theobroma cacao]
Length = 246
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/62 (72%), Positives = 52/62 (83%), Gaps = 3/62 (4%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVKKV---TDLLTDIEDL 228
S++++V FQKILRG YNIRTT+R QMGQDISGACGQLVVNLP K+ T LLTDIEDL
Sbjct: 185 SSEQRVSEFQKILRGSYNIRTTVRKQMGQDISGACGQLVVNLPDKRSRENTALLTDIEDL 244
Query: 227 RV 222
R+
Sbjct: 245 RI 246
>ref|XP_007042640.1| Radical SAM superfamily protein isoform 1 [Theobroma cacao]
gi|590687358|ref|XP_007042641.1| Radical SAM superfamily
protein isoform 1 [Theobroma cacao]
gi|508706575|gb|EOX98471.1| Radical SAM superfamily
protein isoform 1 [Theobroma cacao]
gi|508706576|gb|EOX98472.1| Radical SAM superfamily
protein isoform 1 [Theobroma cacao]
Length = 373
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/62 (72%), Positives = 52/62 (83%), Gaps = 3/62 (4%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVKKV---TDLLTDIEDL 228
S++++V FQKILRG YNIRTT+R QMGQDISGACGQLVVNLP K+ T LLTDIEDL
Sbjct: 312 SSEQRVSEFQKILRGSYNIRTTVRKQMGQDISGACGQLVVNLPDKRSRENTALLTDIEDL 371
Query: 227 RV 222
R+
Sbjct: 372 RI 373
>ref|XP_002265287.1| PREDICTED: ribosomal RNA large subunit methyltransferase N [Vitis
vinifera] gi|147817733|emb|CAN60150.1| hypothetical
protein VITISV_044331 [Vitis vinifera]
gi|296083052|emb|CBI22456.3| unnamed protein product
[Vitis vinifera]
Length = 372
Score = 86.7 bits (213), Expect = 3e-15
Identities = 45/62 (72%), Positives = 51/62 (82%), Gaps = 3/62 (4%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVKKVT---DLLTDIEDL 228
S+++KV RFQKILRG YNIRTT+R QMGQDISGACGQLVVN P K+ T LLTDIEDL
Sbjct: 311 SSEQKVARFQKILRGTYNIRTTVRKQMGQDISGACGQLVVNQPDKRSTGSAGLLTDIEDL 370
Query: 227 RV 222
+
Sbjct: 371 HL 372
>ref|XP_006486920.1| PREDICTED: uncharacterized protein LOC102607675 [Citrus sinensis]
Length = 375
Score = 85.5 bits (210), Expect = 7e-15
Identities = 45/60 (75%), Positives = 49/60 (81%), Gaps = 3/60 (5%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVK---KVTDLLTDIEDL 228
S+D+KV FQKILRG YNIRTT+R QMGQDISGACGQLVVNLP K K T +TDIEDL
Sbjct: 313 SSDDKVSSFQKILRGSYNIRTTVRKQMGQDISGACGQLVVNLPDKISAKSTPPVTDIEDL 372
>ref|XP_006422823.1| hypothetical protein CICLE_v10028673mg [Citrus clementina]
gi|557524757|gb|ESR36063.1| hypothetical protein
CICLE_v10028673mg [Citrus clementina]
Length = 375
Score = 84.3 bits (207), Expect = 2e-14
Identities = 45/60 (75%), Positives = 47/60 (78%), Gaps = 3/60 (5%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVK---KVTDLLTDIEDL 228
S D KV FQKILRG YNIRTT+R QMGQDISGACGQLVVNLP K K T +TDIEDL
Sbjct: 313 SGDNKVSSFQKILRGSYNIRTTVRKQMGQDISGACGQLVVNLPDKMSAKSTPPVTDIEDL 372
>ref|XP_002300266.1| radical SAM domain-containing family protein [Populus trichocarpa]
gi|222847524|gb|EEE85071.1| radical SAM
domain-containing family protein [Populus trichocarpa]
Length = 373
Score = 82.0 bits (201), Expect = 8e-14
Identities = 45/59 (76%), Positives = 51/59 (86%), Gaps = 2/59 (3%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLP-VKKVTDL-LTDIEDL 228
S++EKV+RFQKILRG NIRTT+R QMGQDISGACGQLVVNLP KK +L +TDIEDL
Sbjct: 311 SSEEKVLRFQKILRGVNNIRTTVRKQMGQDISGACGQLVVNLPDEKKPPNLGVTDIEDL 369
>gb|EYU37568.1| hypothetical protein MIMGU_mgv1a008462mg [Mimulus guttatus]
Length = 373
Score = 81.6 bits (200), Expect = 1e-13
Identities = 44/62 (70%), Positives = 48/62 (77%), Gaps = 3/62 (4%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVK---KVTDLLTDIEDL 228
S D KV +FQKILRG YNIRTT+R QMGQDISGACGQLVVNL K +LL DIEDL
Sbjct: 312 SIDMKVTKFQKILRGTYNIRTTVRKQMGQDISGACGQLVVNLADKISLNSANLLPDIEDL 371
Query: 227 RV 222
R+
Sbjct: 372 RI 373
>ref|XP_007157211.1| hypothetical protein PHAVU_002G051800g [Phaseolus vulgaris]
gi|561030626|gb|ESW29205.1| hypothetical protein
PHAVU_002G051800g [Phaseolus vulgaris]
Length = 381
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/59 (69%), Positives = 49/59 (83%), Gaps = 2/59 (3%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVKKV--TDLLTDIEDL 228
++++KV FQKILRG YNIRTT+R QMGQDISGACGQLVVN+P K + + LTDIEDL
Sbjct: 321 TSEQKVSNFQKILRGTYNIRTTVRKQMGQDISGACGQLVVNIPDKSLASAEPLTDIEDL 379
>gb|AFK36133.1| unknown [Medicago truncatula]
Length = 135
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/59 (69%), Positives = 50/59 (84%), Gaps = 2/59 (3%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVKKV--TDLLTDIEDL 228
++++KV +FQKILRG YNIRTT+R QMG+DISGACGQLVVNLP K + + LTDIEDL
Sbjct: 75 TSEQKVSKFQKILRGTYNIRTTVRKQMGEDISGACGQLVVNLPDKSLGNANPLTDIEDL 133
>ref|XP_003610615.1| Ribosomal RNA large subunit methyltransferase N [Medicago
truncatula] gi|355511950|gb|AES93573.1| Ribosomal RNA
large subunit methyltransferase N [Medicago truncatula]
Length = 380
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/59 (69%), Positives = 50/59 (84%), Gaps = 2/59 (3%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVKKV--TDLLTDIEDL 228
++++KV +FQKILRG YNIRTT+R QMG+DISGACGQLVVNLP K + + LTDIEDL
Sbjct: 320 TSEQKVSKFQKILRGTYNIRTTVRKQMGEDISGACGQLVVNLPDKSLGNANPLTDIEDL 378
>ref|XP_004511313.1| PREDICTED: ribosomal RNA large subunit methyltransferase N-like
[Cicer arietinum]
Length = 384
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/59 (67%), Positives = 51/59 (86%), Gaps = 2/59 (3%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVKKV--TDLLTDIEDL 228
++++KV++FQKILRG YNIRTT+R QMG+DISGACGQLVV+LP K + + LTDIEDL
Sbjct: 324 TSEQKVLKFQKILRGTYNIRTTVRKQMGEDISGACGQLVVSLPDKSLGNANPLTDIEDL 382
>gb|AFK48814.1| unknown [Lotus japonicus]
Length = 385
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/59 (69%), Positives = 49/59 (83%), Gaps = 2/59 (3%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVKKV--TDLLTDIEDL 228
S+++KV +F+KILRG YNIRTT+R QMG+ ISGACGQLVVNLP K + D LTDIEDL
Sbjct: 325 SSEQKVSKFRKILRGSYNIRTTVRKQMGEGISGACGQLVVNLPDKSLGNQDPLTDIEDL 383
>ref|XP_004985297.1| PREDICTED: uncharacterized protein LOC101777575 [Setaria italica]
Length = 381
Score = 80.1 bits (196), Expect = 3e-13
Identities = 39/62 (62%), Positives = 51/62 (82%), Gaps = 3/62 (4%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVKKVT---DLLTDIEDL 228
S+D+ V +FQK++RG YNIRTT+R QMGQDI+GACGQLVV+LP ++ T LL+DIED
Sbjct: 320 SSDQNVKKFQKVIRGIYNIRTTVRQQMGQDIAGACGQLVVSLPDERSTGGATLLSDIEDF 379
Query: 227 RV 222
R+
Sbjct: 380 RI 381
>ref|XP_004136937.1| PREDICTED: dual-specificity RNA methyltransferase RlmN 1-like
[Cucumis sativus] gi|449495695|ref|XP_004159917.1|
PREDICTED: dual-specificity RNA methyltransferase RlmN
1-like [Cucumis sativus]
Length = 384
Score = 79.0 bits (193), Expect = 6e-13
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 3/62 (4%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVK---KVTDLLTDIEDL 228
S+DEKV FQ++LRG YNIRTTIR QMGQDISGACGQLVV+LP + K + ++ DIEDL
Sbjct: 323 SSDEKVSVFQQVLRGTYNIRTTIRKQMGQDISGACGQLVVSLPNRSSSKQSSVVPDIEDL 382
Query: 227 RV 222
+
Sbjct: 383 HL 384
>gb|EEC74707.1| hypothetical protein OsI_10424 [Oryza sativa Indica Group]
Length = 388
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 3/62 (4%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVKKV---TDLLTDIEDL 228
S++ V +FQKILRG YNIRTTIR QMGQDI+GACGQLVV+LP ++ LL+DIED+
Sbjct: 327 SSEHNVKKFQKILRGIYNIRTTIRQQMGQDIAGACGQLVVSLPDERSAGGATLLSDIEDI 386
Query: 227 RV 222
R+
Sbjct: 387 RI 388
>ref|NP_001049302.1| Os03g0202300 [Oryza sativa Japonica Group]
gi|108706720|gb|ABF94515.1| radical SAM enzyme, Cfr
family protein, expressed [Oryza sativa Japonica Group]
gi|113547773|dbj|BAF11216.1| Os03g0202300 [Oryza sativa
Japonica Group]
Length = 388
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 3/62 (4%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVKKV---TDLLTDIEDL 228
S++ V +FQKILRG YNIRTTIR QMGQDI+GACGQLVV+LP ++ LL+DIED+
Sbjct: 327 SSEHNVKKFQKILRGIYNIRTTIRQQMGQDIAGACGQLVVSLPDERSAGGATLLSDIEDI 386
Query: 227 RV 222
R+
Sbjct: 387 RI 388
>ref|XP_006649584.1| PREDICTED: uncharacterized protein LOC102709060 [Oryza brachyantha]
Length = 381
Score = 77.8 bits (190), Expect = 1e-12
Identities = 38/62 (61%), Positives = 51/62 (82%), Gaps = 3/62 (4%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVKKV---TDLLTDIEDL 228
S+D+ V +FQK+LRG Y+IRTT+R QMGQDI+GACGQLVV+LP ++ LL+DIED+
Sbjct: 320 SSDQNVKKFQKVLRGIYSIRTTVRQQMGQDIAGACGQLVVSLPDERSGGGATLLSDIEDI 379
Query: 227 RV 222
R+
Sbjct: 380 RI 381
>ref|XP_006346301.1| PREDICTED: uncharacterized protein LOC102584921 [Solanum tuberosum]
Length = 373
Score = 77.8 bits (190), Expect = 1e-12
Identities = 41/61 (67%), Positives = 48/61 (78%), Gaps = 3/61 (4%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVKKVTD---LLTDIEDL 228
S ++KV RFQKILR Y+IRTT+R +MGQDISGACGQLVVNLP K+ LTDIED+
Sbjct: 311 STNQKVTRFQKILRDIYDIRTTVRKEMGQDISGACGQLVVNLPDKRSISNAAPLTDIEDI 370
Query: 227 R 225
R
Sbjct: 371 R 371
>ref|XP_004230694.1| PREDICTED: ribosomal RNA large subunit methyltransferase N-like
[Solanum lycopersicum]
Length = 373
Score = 77.8 bits (190), Expect = 1e-12
Identities = 41/61 (67%), Positives = 48/61 (78%), Gaps = 3/61 (4%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVKKVTD---LLTDIEDL 228
S ++KV RFQKILR Y+IRTT+R +MGQDISGACGQLVVNLP K+ LTDIED+
Sbjct: 311 STNQKVARFQKILRDIYDIRTTVRKEMGQDISGACGQLVVNLPDKRSISNAAPLTDIEDI 370
Query: 227 R 225
R
Sbjct: 371 R 371
>ref|XP_003558557.1| PREDICTED: ribosomal RNA large subunit methyltransferase N 2-like
[Brachypodium distachyon]
Length = 382
Score = 77.8 bits (190), Expect = 1e-12
Identities = 38/62 (61%), Positives = 51/62 (82%), Gaps = 3/62 (4%)
Frame = -3
Query: 398 SNDEKVIRFQKILRGGYNIRTTIRMQMGQDISGACGQLVVNLPVKKV---TDLLTDIEDL 228
S+D+ V +FQK+LRG Y+IRTT+R +MGQDI+GACGQLVV+LP ++ LL+DIEDL
Sbjct: 321 SSDQSVKKFQKVLRGVYSIRTTVRQEMGQDIAGACGQLVVSLPDERSAGGATLLSDIEDL 380
Query: 227 RV 222
R+
Sbjct: 381 RI 382