BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00023786
         (1232 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]         84   4e-46
gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group]      81   5e-46
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]          81   9e-46
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc...    83   1e-45
gb|ABA98136.2| retrotransposon protein, putative, Ty1-copia subc...    81   1e-45
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]      82   2e-45
gb|EEE51974.1| hypothetical protein OsJ_33644 [Oryza sativa Japo...    82   2e-45
gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subc...    81   2e-45
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s...    81   2e-45
gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subc...    81   2e-45
gb|ABF98943.1| retrotransposon protein, putative, unclassified, ...    81   2e-45
gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subc...    81   2e-45
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc...    81   2e-45
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-...    81   2e-45
gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subc...    81   2e-45
gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group...    81   2e-45
gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group...    81   2e-45
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]          81   2e-45
gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Jap...    81   2e-45
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...    81   2e-45

>emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
          Length = 1314

 Score = 83.6 bits (205), Expect(3) = 4e-46
 Identities = 38/79 (48%), Positives = 53/79 (67%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 534 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNCTLTDLVNAMLDTAGLPKAWWGE 593

Query: 183 VIFTAYHITIRIPHRKLGK 239
           V+ T+ H+  R+P+R   K
Sbjct: 594 VLLTSNHVLNRVPNRNKDK 612



 Score = 75.9 bits (185), Expect(3) = 4e-46
 Identities = 62/169 (36%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +   +I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 669  LIVKSEVLDMHVGIIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSIIPPEQTEHTHEL 728

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +        
Sbjct: 729  VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKE------A 781

Query: 769  VNHVKPYLRISGVT*M-HQTY-----*MHMVFKKKLRSDGSIDKFKARL 897
            V      +  +G   +  Q Y         VFKKKLR DG+I+K+KARL
Sbjct: 782  VRSEMDSIIANGTWEVTEQPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 830



 Score = 74.7 bits (182), Expect(3) = 4e-46
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W    P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 612 KTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 666


>gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1289

 Score = 81.3 bits (199), Expect(3) = 5e-46
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 562 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 621

Query: 183 VIFTAYHITIRIPHRKLGK 239
            + T+ H+  R+P+R   K
Sbjct: 622 ALLTSNHVLNRVPNRNKDK 640



 Score = 76.6 bits (187), Expect(3) = 5e-46
 Identities = 31/55 (56%), Positives = 42/55 (76%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W D  P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 640 KTPYEIWIDRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAYHSIAY 694



 Score = 75.9 bits (185), Expect(3) = 5e-46
 Identities = 58/163 (35%), Positives = 76/163 (46%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +    I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 697  LIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHEL 756

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +      + 
Sbjct: 757  VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 769  VNHVKPYLRISGVT*MHQTY*MHMVFKKKLRSDGSIDKFKARL 897
                     ++      +      VFKKKLR DG+I+K+KARL
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 858


>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
          Length = 1320

 Score = 81.3 bits (199), Expect(3) = 9e-46
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 562 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 621

Query: 183 VIFTAYHITIRIPHRKLGK 239
            + T+ H+  R+P+R   K
Sbjct: 622 ALLTSNHVLNRVPNRNKDK 640



 Score = 75.9 bits (185), Expect(3) = 9e-46
 Identities = 30/55 (54%), Positives = 42/55 (76%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W    P+L+Y+++W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 640 KTPYEIWIGRKPSLSYLRIWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 694



 Score = 75.9 bits (185), Expect(3) = 9e-46
 Identities = 59/163 (36%), Positives = 76/163 (46%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +    IIE+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 697  LIVKSEVLDMHVGTIIESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHEL 756

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +      + 
Sbjct: 757  VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 769  VNHVKPYLRISGVT*MHQTY*MHMVFKKKLRSDGSIDKFKARL 897
                     ++      +      VFKKKLR DG+I+K+KARL
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 858


>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1287

 Score = 82.8 bits (203), Expect(3) = 1e-45
 Identities = 37/79 (46%), Positives = 53/79 (67%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE+TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 523 GEFFSNEFDLFCEEHGIIHEMTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 582

Query: 183 VIFTAYHITIRIPHRKLGK 239
            + T+ H+  R+P+R   K
Sbjct: 583 ALLTSNHVLNRVPNRNKDK 601



 Score = 75.1 bits (183), Expect(3) = 1e-45
 Identities = 58/163 (35%), Positives = 76/163 (46%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +    I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 658  LIVKSEVPDMHVGTIMESRDAIFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHEL 717

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +      + 
Sbjct: 718  VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 776

Query: 769  VNHVKPYLRISGVT*MHQTY*MHMVFKKKLRSDGSIDKFKARL 897
                     ++      +      VFKKKLR DG+I+K+KARL
Sbjct: 777  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 819



 Score = 74.7 bits (182), Expect(3) = 1e-45
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W    P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 601 KTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 655


>gb|ABA98136.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1249

 Score = 81.3 bits (199), Expect(3) = 1e-45
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 562 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 621

Query: 183 VIFTAYHITIRIPHRKLGK 239
            + T+ H+  R+P+R   K
Sbjct: 622 ALLTSNHVLNRVPNRNKDK 640



 Score = 76.6 bits (187), Expect(3) = 1e-45
 Identities = 60/169 (35%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +    I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 697  LIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPFEIIPSSITPPEQTEHTHEL 756

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + + +      
Sbjct: 757  VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEV------ 809

Query: 769  VNHVKPYLRISGVT*MHQ------TY*MHMVFKKKLRSDGSIDKFKARL 897
            V+     +  +G   + +            VFKKKLR DG+I+K+KARL
Sbjct: 810  VHSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 858



 Score = 74.7 bits (182), Expect(3) = 1e-45
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W    P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 640 KTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 694


>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1391

 Score = 81.6 bits (200), Expect(3) = 2e-45
 Identities = 38/79 (48%), Positives = 52/79 (65%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 651 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 710

Query: 183 VIFTAYHITIRIPHRKLGK 239
            + T+ H+  RIP+R   K
Sbjct: 711 ALLTSNHVLNRIPNRNKDK 729



 Score = 75.9 bits (185), Expect(3) = 2e-45
 Identities = 58/163 (35%), Positives = 76/163 (46%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +    I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 786  LIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHEL 845

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +      + 
Sbjct: 846  VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 904

Query: 769  VNHVKPYLRISGVT*MHQTY*MHMVFKKKLRSDGSIDKFKARL 897
                     ++      +      VFKKKLR DG+I+K+KARL
Sbjct: 905  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 947



 Score = 74.7 bits (182), Expect(3) = 2e-45
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W    P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 729 KTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 783


>gb|EEE51974.1| hypothetical protein OsJ_33644 [Oryza sativa Japonica Group]
          Length = 679

 Score = 81.6 bits (200), Expect(3) = 2e-45
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 302 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 361

Query: 183 VIFTAYHITIRIPHRKLGK 239
            + T+ H+  R+P+R   K
Sbjct: 362 ALLTSNHVLNRVPNRNKNK 380



 Score = 75.9 bits (185), Expect(3) = 2e-45
 Identities = 58/163 (35%), Positives = 76/163 (46%)
 Frame = +1

Query: 409 LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
           L ++S    +    I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 437 LIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHEL 496

Query: 589 DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
              E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +      + 
Sbjct: 497 VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 555

Query: 769 VNHVKPYLRISGVT*MHQTY*MHMVFKKKLRSDGSIDKFKARL 897
                    ++      +      VFKKKLR DG+I+K+KARL
Sbjct: 556 SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 598



 Score = 74.7 bits (182), Expect(3) = 2e-45
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W    P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 380 KTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 434


>gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 2027

 Score = 81.3 bits (199), Expect(3) = 2e-45
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 757 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 816

Query: 183 VIFTAYHITIRIPHRKLGK 239
            + T+ H+  R+P+R   K
Sbjct: 817 ALLTSNHVLNRVPNRNKDK 835



 Score = 75.9 bits (185), Expect(3) = 2e-45
 Identities = 58/163 (35%), Positives = 76/163 (46%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +    I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 892  LIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHEL 951

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +      + 
Sbjct: 952  VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 1010

Query: 769  VNHVKPYLRISGVT*MHQTY*MHMVFKKKLRSDGSIDKFKARL 897
                     ++      +      VFKKKLR DG+I+K+KARL
Sbjct: 1011 SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 1053



 Score = 74.7 bits (182), Expect(3) = 2e-45
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W    P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 835 KTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 889


>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
           Group]
          Length = 1911

 Score = 81.3 bits (199), Expect(3) = 2e-45
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 562 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 621

Query: 183 VIFTAYHITIRIPHRKLGK 239
            + T+ H+  R+P+R   K
Sbjct: 622 ALLTSNHVLNRVPNRNKDK 640



 Score = 75.9 bits (185), Expect(3) = 2e-45
 Identities = 58/163 (35%), Positives = 76/163 (46%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +    I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 697  LIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHEL 756

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +      + 
Sbjct: 757  VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 769  VNHVKPYLRISGVT*MHQTY*MHMVFKKKLRSDGSIDKFKARL 897
                     ++      +      VFKKKLR DG+I+K+KARL
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 858



 Score = 74.7 bits (182), Expect(3) = 2e-45
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W    P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 640 KTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 694


>gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1805

 Score = 81.3 bits (199), Expect(3) = 2e-45
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +3

Query: 3    GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
            GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 1047 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 1106

Query: 183  VIFTAYHITIRIPHRKLGK 239
             + T+ H+  R+P+R   K
Sbjct: 1107 ALLTSNHVLNRVPNRNKDK 1125



 Score = 75.9 bits (185), Expect(3) = 2e-45
 Identities = 58/163 (35%), Positives = 76/163 (46%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +    I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 1182 LIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHEL 1241

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +      + 
Sbjct: 1242 VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 1300

Query: 769  VNHVKPYLRISGVT*MHQTY*MHMVFKKKLRSDGSIDKFKARL 897
                     ++      +      VFKKKLR DG+I+K+KARL
Sbjct: 1301 SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 1343



 Score = 74.7 bits (182), Expect(3) = 2e-45
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +2

Query: 236  KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
            KTPYE+W    P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 1125 KTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 1179


>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 1460

 Score = 81.3 bits (199), Expect(3) = 2e-45
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 562 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 621

Query: 183 VIFTAYHITIRIPHRKLGK 239
            + T+ H+  R+P+R   K
Sbjct: 622 ALLTSNHVLNRVPNRNKDK 640



 Score = 75.9 bits (185), Expect(3) = 2e-45
 Identities = 58/163 (35%), Positives = 76/163 (46%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +    I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 697  LIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHEL 756

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +      + 
Sbjct: 757  VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 769  VNHVKPYLRISGVT*MHQTY*MHMVFKKKLRSDGSIDKFKARL 897
                     ++      +      VFKKKLR DG+I+K+KARL
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 858



 Score = 74.7 bits (182), Expect(3) = 2e-45
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W    P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 640 KTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 694


>gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1320

 Score = 81.3 bits (199), Expect(3) = 2e-45
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 562 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 621

Query: 183 VIFTAYHITIRIPHRKLGK 239
            + T+ H+  R+P+R   K
Sbjct: 622 ALLTSNHVLNRVPNRNKDK 640



 Score = 75.9 bits (185), Expect(3) = 2e-45
 Identities = 58/163 (35%), Positives = 76/163 (46%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +    I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 697  LIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHEL 756

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +      + 
Sbjct: 757  VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 769  VNHVKPYLRISGVT*MHQTY*MHMVFKKKLRSDGSIDKFKARL 897
                     ++      +      VFKKKLR DG+I+K+KARL
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 858



 Score = 74.7 bits (182), Expect(3) = 2e-45
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W    P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 640 KTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 694


>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1320

 Score = 81.3 bits (199), Expect(3) = 2e-45
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 562 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWRE 621

Query: 183 VIFTAYHITIRIPHRKLGK 239
            + T+ H+  R+P+R   K
Sbjct: 622 ALLTSNHVLNRVPNRNKDK 640



 Score = 75.9 bits (185), Expect(3) = 2e-45
 Identities = 58/163 (35%), Positives = 76/163 (46%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +    I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 697  LIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHEL 756

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +      + 
Sbjct: 757  VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 769  VNHVKPYLRISGVT*MHQTY*MHMVFKKKLRSDGSIDKFKARL 897
                     ++      +      VFKKKLR DG+I+K+KARL
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 858



 Score = 74.7 bits (182), Expect(3) = 2e-45
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W    P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 640 KTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 694


>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
          Length = 1320

 Score = 81.3 bits (199), Expect(3) = 2e-45
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 562 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 621

Query: 183 VIFTAYHITIRIPHRKLGK 239
            + T+ H+  R+P+R   K
Sbjct: 622 ALLTSNHVLNRVPNRNKDK 640



 Score = 75.9 bits (185), Expect(3) = 2e-45
 Identities = 58/163 (35%), Positives = 76/163 (46%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +    I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 697  LIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHEL 756

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +      + 
Sbjct: 757  VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 769  VNHVKPYLRISGVT*MHQTY*MHMVFKKKLRSDGSIDKFKARL 897
                     ++      +      VFKKKLR DG+I+K+KARL
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 858



 Score = 74.7 bits (182), Expect(3) = 2e-45
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W    P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 640 KTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 694


>gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1320

 Score = 81.3 bits (199), Expect(3) = 2e-45
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 562 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 621

Query: 183 VIFTAYHITIRIPHRKLGK 239
            + T+ H+  R+P+R   K
Sbjct: 622 ALLTSNHVLNRVPNRNKDK 640



 Score = 75.9 bits (185), Expect(3) = 2e-45
 Identities = 58/163 (35%), Positives = 76/163 (46%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +    I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 697  LIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHEL 756

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +      + 
Sbjct: 757  VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 769  VNHVKPYLRISGVT*MHQTY*MHMVFKKKLRSDGSIDKFKARL 897
                     ++      +      VFKKKLR DG+I+K+KARL
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 858



 Score = 74.7 bits (182), Expect(3) = 2e-45
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W    P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 640 KTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 694


>gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|51854387|gb|AAU10767.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1320

 Score = 81.3 bits (199), Expect(3) = 2e-45
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 562 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 621

Query: 183 VIFTAYHITIRIPHRKLGK 239
            + T+ H+  R+P+R   K
Sbjct: 622 ALLTSNHVLNRVPNRNKDK 640



 Score = 75.9 bits (185), Expect(3) = 2e-45
 Identities = 58/163 (35%), Positives = 76/163 (46%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +    I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 697  LIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHEL 756

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +      + 
Sbjct: 757  VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 769  VNHVKPYLRISGVT*MHQTY*MHMVFKKKLRSDGSIDKFKARL 897
                     ++      +      VFKKKLR DG+I+K+KARL
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 858



 Score = 74.7 bits (182), Expect(3) = 2e-45
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W    P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 640 KTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 694


>gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|53749238|gb|AAU90098.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1320

 Score = 81.3 bits (199), Expect(3) = 2e-45
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 562 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 621

Query: 183 VIFTAYHITIRIPHRKLGK 239
            + T+ H+  R+P+R   K
Sbjct: 622 ALLTSNHVLNRVPNRNKDK 640



 Score = 75.9 bits (185), Expect(3) = 2e-45
 Identities = 58/163 (35%), Positives = 76/163 (46%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +    I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 697  LIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHEL 756

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +      + 
Sbjct: 757  VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDANYWKEAVRSEMD 815

Query: 769  VNHVKPYLRISGVT*MHQTY*MHMVFKKKLRSDGSIDKFKARL 897
                     ++      +      VFKKKLR DG+I+K+KARL
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 858



 Score = 74.7 bits (182), Expect(3) = 2e-45
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W    P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 640 KTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 694


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score = 81.3 bits (199), Expect(3) = 2e-45
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 562 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 621

Query: 183 VIFTAYHITIRIPHRKLGK 239
            + T+ H+  R+P+R   K
Sbjct: 622 ALLTSNHVLNRVPNRNKDK 640



 Score = 75.9 bits (185), Expect(3) = 2e-45
 Identities = 58/163 (35%), Positives = 76/163 (46%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +    I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 697  LIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHEL 756

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +      + 
Sbjct: 757  VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 769  VNHVKPYLRISGVT*MHQTY*MHMVFKKKLRSDGSIDKFKARL 897
                     ++      +      VFKKKLR DG+I+K+KARL
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 858



 Score = 74.7 bits (182), Expect(3) = 2e-45
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W    P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 640 KTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 694


>gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1308

 Score = 81.3 bits (199), Expect(3) = 2e-45
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 562 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 621

Query: 183 VIFTAYHITIRIPHRKLGK 239
            + T+ H+  R+P+R   K
Sbjct: 622 ALLTSNHVLNRVPNRNKDK 640



 Score = 75.9 bits (185), Expect(3) = 2e-45
 Identities = 58/163 (35%), Positives = 76/163 (46%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +    I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 697  LIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHEL 756

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +      + 
Sbjct: 757  VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 769  VNHVKPYLRISGVT*MHQTY*MHMVFKKKLRSDGSIDKFKARL 897
                     ++      +      VFKKKLR DG+I+K+KARL
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 858



 Score = 74.7 bits (182), Expect(3) = 2e-45
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W    P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 640 KTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 694


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score = 81.3 bits (199), Expect(3) = 2e-45
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +3

Query: 3   GEYNSNILSQFCEQNDIIHEVTPPYLPESNGLVERKNICLKEMLYALLIYSGIPSNMW*E 182
           GE+ SN    FCE++ IIHE TPPY PESNG+ ERKN  L +++ A+L  +G+P   W E
Sbjct: 562 GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 621

Query: 183 VIFTAYHITIRIPHRKLGK 239
            + T+ H+  R+P+R   K
Sbjct: 622 ALLTSNHVLNRVPNRNKDK 640



 Score = 75.9 bits (185), Expect(3) = 2e-45
 Identities = 58/163 (35%), Positives = 76/163 (46%)
 Frame = +1

Query: 409  LTLRSNEDGIDSNVIIEARDAELFEDIFPMKVKASLSSNDKEKMVMKREMPIPESFPKEI 588
            L ++S    +    I+E+RDA  FE  FPMK   S S+   E +      P       E+
Sbjct: 697  LIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHEL 756

Query: 589  DLSEIVKEIEPRRSKRIRKETNLGDALYTYLVDDDPLSYQEAVISPDAIFLERIH*Q*IR 768
               E V E  PRRSKR R   + GD    YLVDD P S  EA  SPDA + +      + 
Sbjct: 757  VSEEDVSEA-PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 769  VNHVKPYLRISGVT*MHQTY*MHMVFKKKLRSDGSIDKFKARL 897
                     ++      +      VFKKKLR DG+I+K+KARL
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 858



 Score = 74.7 bits (182), Expect(3) = 2e-45
 Identities = 30/55 (54%), Positives = 41/55 (74%)
 Frame = +2

Query: 236 KTPYELWKDYAPNLNYVKLWRCLCKVRLLETKKRKIGPKIIDCAFLGYSEYSTSY 400
           KTPYE+W    P+L+Y++ W CL KV +  TKKRK+GPK +DC FLGY+ +S +Y
Sbjct: 640 KTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAY 694