BLASTX nr result
ID: Akebia27_contig00023319
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00023319
(482 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th... 191 1e-46
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis] 178 8e-43
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 174 2e-41
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis... 172 4e-41
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 172 4e-41
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 172 6e-41
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 170 2e-40
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 170 2e-40
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 169 4e-40
ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Caps... 162 6e-38
gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali... 160 1e-37
ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis tha... 160 1e-37
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus... 160 2e-37
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall... 160 2e-37
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 160 2e-37
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 159 3e-37
ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ... 158 7e-37
ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [A... 155 4e-36
ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ... 154 9e-36
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum] 150 2e-34
>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao]
gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao]
gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 191 bits (484), Expect = 1e-46
Identities = 95/160 (59%), Positives = 119/160 (74%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
IQVS FPS+V AE VK FLE YTG+ TVYALK+RQ K + R++A+VQFT AE I
Sbjct: 5 IQVSRFPSNVHAEEVKTFLELYTGKETVYALKIRQQK---NGGRAYAIVQFTKSTDAELI 61
Query: 181 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 360
L NQRLYYG+SYLK EM+ DIVPKPRT + ++E LHFGCQ+S EKF LW+ +D
Sbjct: 62 IRLTNQRLYYGSSYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEKFYVLWEEVDV 121
Query: 361 ILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHPR 480
+N G G+RKL+FLL+H +EY+LDL Y++IWQI+L PR
Sbjct: 122 TVNFGMGMRKLQFLLSHHCVEYRLDLFYENIWQIELHRPR 161
>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
Length = 1133
Score = 178 bits (451), Expect = 8e-43
Identities = 91/160 (56%), Positives = 117/160 (73%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
IQ+SGFPS VSAE+VK FLE +TG GTVYA+K+R TK S RS+A+VQF + E+AE I
Sbjct: 5 IQLSGFPSHVSAESVKEFLEGHTGRGTVYAIKIRPTKNGGS--RSYAIVQFMTVETAELI 62
Query: 181 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 360
L N RL+YG SYL M+RDIVPKPR + SL+ LHFGCQIS+EKFS LW+ +
Sbjct: 63 IRLANPRLWYGRSYLLARVMERDIVPKPRATLYSLQNVTLHFGCQISKEKFSFLWRVGNV 122
Query: 361 ILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHPR 480
++ G GLR+L F LT+ +EY+L L Y+++WQI+L PR
Sbjct: 123 SVDFGLGLRRLNFYLTYGPVEYRLQLLYENVWQIELHRPR 162
>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 174 bits (440), Expect = 2e-41
Identities = 92/159 (57%), Positives = 112/159 (70%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
IQV GF S VSA VK FLE YTG TVYALK+RQ K + R+FA+VQFT A I
Sbjct: 5 IQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHK---KSGRAFAIVQFTRSSDAGLI 61
Query: 181 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 360
L NQRLYYG SYLK EM+ DIVPKPR + ++E ++FGCQ+SEEKF LWK +
Sbjct: 62 IRLANQRLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVLWKADNV 121
Query: 361 ILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHP 477
LN G G+RKLEFLL++ +YKL+L Y++IWQI+LR P
Sbjct: 122 TLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCP 160
>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
1a [Cucumis sativus]
Length = 1130
Score = 172 bits (436), Expect = 4e-41
Identities = 89/160 (55%), Positives = 113/160 (70%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
I +SGFPS V+A+ VK FLE +TG GTVYA+K+R K R R +A+VQFTS AE I
Sbjct: 5 IHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPK--RGGGRLYAIVQFTSATQAELI 62
Query: 181 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 360
SL NQRL+YG+SYLK + DIVPKPRT M +LE L FGCQ+S EKF LW+G
Sbjct: 63 ISLANQRLWYGSSYLKARATEVDIVPKPRTYMYTLEELLLCFGCQVSTEKFRVLWEGNVD 122
Query: 361 ILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHPR 480
++ G G+RK+ F L ++ +EY+L+LSY+ IWQIQL PR
Sbjct: 123 LVTFGIGMRKMNFHLKYKSVEYRLELSYEIIWQIQLHCPR 162
>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
family protein [Populus trichocarpa]
Length = 1133
Score = 172 bits (436), Expect = 4e-41
Identities = 84/160 (52%), Positives = 116/160 (72%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
++VSGFPSS +A V+VFLE++TG GTV ALK+R+ +T R +A+VQFT+ +AEQI
Sbjct: 5 VKVSGFPSSTTAGAVQVFLESHTGGGTVEALKIREIRT--GGARKYAIVQFTTTRAAEQI 62
Query: 181 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 360
SL N RL+YG SYL M RDI+P+PR+ + ++E LHFG Q S+EKFS++W G +
Sbjct: 63 ISLANPRLWYGHSYLNARPMDRDIIPQPRSFLHTMESVTLHFGYQTSKEKFSAVWSGNNV 122
Query: 361 ILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHPR 480
+N G G+RKL F L+H EYKL+L +++IWQI+L PR
Sbjct: 123 SVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPR 162
>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
max] gi|571439308|ref|XP_006574822.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
max] gi|571439310|ref|XP_006574823.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
max]
Length = 1125
Score = 172 bits (435), Expect = 6e-41
Identities = 86/163 (52%), Positives = 117/163 (71%), Gaps = 3/163 (1%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
I++ GFP+SV+ VK F+E YTGEGTV+A+KLR K PR+FA++QFT+ SA +
Sbjct: 5 IELYGFPTSVNVSDVKTFVEQYTGEGTVFAIKLRHGKGRV--PRAFAIIQFTTANSATSM 62
Query: 181 SSLIN---QRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKG 351
S N + L YGTSYLK EM+RDIVP+PR + SL+ L FGCQIS+ +FS LWK
Sbjct: 63 MSRANNILRTLRYGTSYLKAREMERDIVPRPRVFLHSLDDVKLSFGCQISKGRFSVLWKK 122
Query: 352 LDAILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHPR 480
D I+N G G+RK+ FL +H +++YKL+LSY++IW+I+L PR
Sbjct: 123 QDVIVNFGSGMRKMHFLFSHNNVQYKLELSYENIWKIELHRPR 165
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 170 bits (431), Expect = 2e-40
Identities = 86/162 (53%), Positives = 118/162 (72%), Gaps = 2/162 (1%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
IQV GFP+ V+AE VK FLE+ TG GTVYALKLR K + R +A+VQFT+ E+A+ I
Sbjct: 5 IQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPK--KGVGRLYAIVQFTTKEAADTI 62
Query: 181 SSLI--NQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGL 354
SL ++L+YG SYL M++D VP+PRT M ++E LHFGC+IS EKF+ LW+G+
Sbjct: 63 ISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNEKFAVLWRGV 122
Query: 355 DAILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHPR 480
+ +N GFG+RK+ FLL+H EY+L+L Y++IW+I+L PR
Sbjct: 123 NVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPR 164
>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 170 bits (430), Expect = 2e-40
Identities = 85/160 (53%), Positives = 115/160 (71%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
IQV GFPS VSA+ +K FLE YTGEGT+ AL+++Q ++ S + A VQFTS E AE I
Sbjct: 5 IQVYGFPSIVSADEIKEFLEKYTGEGTIEALEIKQPRSGAS--MTHAKVQFTSFELAEFI 62
Query: 181 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 360
+L ++++YG +YLK EM DI+PKPR + S++ LHFGCQ+S+E+F LWK ++
Sbjct: 63 ITLCKKKVWYGRNYLKAREMDLDIIPKPRAFLHSMDRITLHFGCQMSDERFCVLWKAINV 122
Query: 361 ILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHPR 480
+ G GLRK F L+H EYKL+LSY++IWQIQL+HPR
Sbjct: 123 SVKFGSGLRKFYFFLSHGSEEYKLELSYENIWQIQLQHPR 162
>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 169 bits (428), Expect = 4e-40
Identities = 90/159 (56%), Positives = 110/159 (69%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
IQV GF S VSA VK FLE YTG TVYALK+RQ K + R+FA+VQFT A I
Sbjct: 5 IQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHK---KSGRAFAIVQFTRSSDAGLI 61
Query: 181 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 360
L NQRLYYG SYLK EM+ DIVPKPR + ++E ++F C +SEEKF LWK +
Sbjct: 62 IRLANQRLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFDCHVSEEKFYVLWKADNV 121
Query: 361 ILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHP 477
LN G G+RKLEFLL++ +YKL+L Y++IWQI+LR P
Sbjct: 122 TLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCP 160
>ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Capsella rubella]
gi|482575337|gb|EOA39524.1| hypothetical protein
CARUB_v10008144mg [Capsella rubella]
Length = 1107
Score = 162 bits (409), Expect = 6e-38
Identities = 79/160 (49%), Positives = 109/160 (68%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
IQV GFP V+ + VK+FLE TG GTVYA+K+RQ K R PR FA+VQFTS A I
Sbjct: 5 IQVFGFPVGVNTDDVKIFLERLTGSGTVYAIKVRQPK--RGGPRVFAIVQFTSERHARLI 62
Query: 181 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 360
++ +RLYYG SYLK EM++DIVPKPR + S+ ++FGCQ+S +K +LW +
Sbjct: 63 ITMAAERLYYGRSYLKAFEMEQDIVPKPRASLHSISNLKMYFGCQVSPKKLLTLWSAHNV 122
Query: 361 ILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHPR 480
++ G G+RKL F ++ +Y+L+LSY++IWQI L P+
Sbjct: 123 CVSFGTGMRKLHFSMSWYQKDYRLELSYENIWQIDLHSPQ 162
>gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
Length = 1107
Score = 160 bits (406), Expect = 1e-37
Identities = 79/160 (49%), Positives = 107/160 (66%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
IQV GFP+ VSAE VK FLE TG GTVYA+K+RQ K + PR +A+VQFTS I
Sbjct: 5 IQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPK--KGGPRVYAIVQFTSERHTRLI 62
Query: 181 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 360
+ +RLYYG SYLK E+++DIVPKPR + ++ + FGCQ+S +KF +LW D
Sbjct: 63 ITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQDV 122
Query: 361 ILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHPR 480
++ G G+RKL F + +Y+L+LSY++IWQI L P+
Sbjct: 123 CVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQ 162
>ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
gi|75335341|sp|Q9LQV2.1|RDR1_ARATH RecName:
Full=RNA-dependent RNA polymerase 1; Short=AtRDRP1;
AltName: Full=RNA-directed RNA polymerase 1
gi|8778232|gb|AAF79241.1|AC006917_26 F10B6.19
[Arabidopsis thaliana] gi|110737376|dbj|BAF00633.1|
putative RNA-directed RNA polymerase [Arabidopsis
thaliana] gi|332191105|gb|AEE29226.1| RNA-dependent RNA
polymerase 1 [Arabidopsis thaliana]
Length = 1107
Score = 160 bits (406), Expect = 1e-37
Identities = 79/160 (49%), Positives = 107/160 (66%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
IQV GFP+ VSAE VK FLE TG GTVYA+K+RQ K + PR +A+VQFTS I
Sbjct: 5 IQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPK--KGGPRVYAIVQFTSERHTRLI 62
Query: 181 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 360
+ +RLYYG SYLK E+++DIVPKPR + ++ + FGCQ+S +KF +LW D
Sbjct: 63 ITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQDV 122
Query: 361 ILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHPR 480
++ G G+RKL F + +Y+L+LSY++IWQI L P+
Sbjct: 123 CVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQ 162
>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
Length = 1110
Score = 160 bits (404), Expect = 2e-37
Identities = 85/156 (54%), Positives = 102/156 (65%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
IQV GFP V+AE VK FLENYTGEGTV AL+++ K R R++A VQFT+ AE I
Sbjct: 5 IQVFGFPYLVAAELVKKFLENYTGEGTVIALEVKTAKVGR---RAYARVQFTNIRCAETI 61
Query: 181 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 360
L RLYYGTSYLK E DIV PRT +E L+FGCQIS KFS LWKG
Sbjct: 62 IDLAKNRLYYGTSYLKAYESDIDIVQNPRTFAHEMENVTLNFGCQISPHKFSVLWKGESV 121
Query: 361 ILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQL 468
+ G G++K+ F L H +EYK+ LSY++IWQI L
Sbjct: 122 TVKFGTGMKKMHFFLRHNSVEYKMQLSYENIWQIVL 157
>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
Length = 1107
Score = 160 bits (404), Expect = 2e-37
Identities = 80/161 (49%), Positives = 108/161 (67%), Gaps = 1/161 (0%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
IQV GFP+ VSAE VK FLE TG GTVYA+K+RQ K + PR FA+VQFT+ A QI
Sbjct: 5 IQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPK--KGGPRVFAIVQFTNERYARQI 62
Query: 181 -SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLD 357
+ +RLYYG SYL E+ +DIVPKPR + ++ ++FGCQ+S +KF +LW D
Sbjct: 63 ITGAAERRLYYGRSYLNAFEVDQDIVPKPRASLHNISGLKMYFGCQVSTQKFLTLWSAQD 122
Query: 358 AILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHPR 480
++ G G+RKL F + +Y+L+LSY++IWQI L P+
Sbjct: 123 VCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQ 163
>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
Length = 1109
Score = 160 bits (404), Expect = 2e-37
Identities = 87/160 (54%), Positives = 110/160 (68%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
IQV G PS+VSA +K FLE YTGEGT+ AL+++Q K+ S + A VQFTS AE I
Sbjct: 5 IQVYGVPSNVSANEIKEFLEKYTGEGTIEALEIKQPKSGVS--MTHAKVQFTSLRLAELI 62
Query: 181 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 360
SL Q L+YG +YLK EM DI+PKPRT + S++ LHFG Q+S E+F LWK ++
Sbjct: 63 ISLAKQ-LWYGGNYLKAREMDLDIIPKPRTFLHSMDRITLHFGYQMSNERFCVLWKAINV 121
Query: 361 ILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHPR 480
+ GFGLRK F L+H EYKL+LS ++IWQIQLR PR
Sbjct: 122 SVKFGFGLRKFYFFLSHGSEEYKLELSCENIWQIQLREPR 161
>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca
subsp. vesca]
Length = 1119
Score = 159 bits (403), Expect = 3e-37
Identities = 82/160 (51%), Positives = 108/160 (67%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
IQ+ GFPS +AE +K FLE +TGEG+V+ALKLR K S R +A++QF S AE+I
Sbjct: 5 IQLHGFPSGQTAENIKEFLEKHTGEGSVFALKLRPAK---SGGRFYAIIQFQSISQAEKI 61
Query: 181 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 360
SL N RL+YG SYL DIVPKPRT + SL LH GCQ++++KFS LW +
Sbjct: 62 ISLANARLWYGRSYLNA-RPAHDIVPKPRTFLHSLRDLVLHVGCQVAKDKFSVLWGTAEV 120
Query: 361 ILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHPR 480
++ GFG+R L+F L +R Y+L LSY++IWQI+L H R
Sbjct: 121 SVDFGFGMRNLQFRLLYRQKVYRLQLSYENIWQIELHHQR 160
>ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase
1 [Arabidopsis lyrata subsp. lyrata]
Length = 1097
Score = 158 bits (400), Expect = 7e-37
Identities = 80/161 (49%), Positives = 109/161 (67%), Gaps = 1/161 (0%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
IQV GFP+ VSAE VK FLE TG GTVYA+K+RQ K + PR FA+VQFT+ A QI
Sbjct: 5 IQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPK--KGGPRVFAIVQFTNERYARQI 62
Query: 181 SSLINQR-LYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLD 357
+ +R LYYG SYL E+++DIVPKPR + ++ ++FGCQ+S +KF +LW D
Sbjct: 63 ITGAAERSLYYGRSYLNAFEVEQDIVPKPRASLHNISGLKMYFGCQVSTQKFLTLWSAQD 122
Query: 358 AILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHPR 480
++ G G+RKL F + +Y+L+LSY++IWQI L P+
Sbjct: 123 VCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQ 163
>ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [Amborella trichopoda]
gi|548853371|gb|ERN11375.1| hypothetical protein
AMTR_s00176p00039530 [Amborella trichopoda]
Length = 1210
Score = 155 bits (393), Expect = 4e-36
Identities = 86/161 (53%), Positives = 107/161 (66%), Gaps = 2/161 (1%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
+QVSGFP AE VK FLE+ TG GTVY LK+R K+ + N R FA+VQFT+ +SAE I
Sbjct: 78 VQVSGFPQGTCAEAVKKFLESITGFGTVYHLKIRIHKS-KPNSRVFAIVQFTTSKSAEVI 136
Query: 181 SSLINQ--RLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGL 354
SL Q LY+G SY+ V M+ DIVP PR LE L+FG QISEE F+ LW
Sbjct: 137 YSLAPQPKSLYFGNSYVIVRYMENDIVPNPRVTYHVLESIQLYFGNQISEESFAILWSNT 196
Query: 355 DAILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHP 477
+ + GFGL+K+ F L H ++YKLDL Y++IWQIQLR P
Sbjct: 197 NVKVEFGFGLKKIFFYLAHTGVDYKLDLYYENIWQIQLRRP 237
>ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase
1 [Arabidopsis lyrata subsp. lyrata]
Length = 1107
Score = 154 bits (390), Expect = 9e-36
Identities = 78/161 (48%), Positives = 107/161 (66%), Gaps = 1/161 (0%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
IQV GFP+ VSAE VK FLE TG GTVYA+K+RQ K + PR FA+VQFT+ A QI
Sbjct: 5 IQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPK--KGGPRVFAIVQFTNEIYARQI 62
Query: 181 -SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLD 357
+ +RLYYG SYL E+++DIVPKPR + ++ ++FGCQ+S + +LW D
Sbjct: 63 ITGAAERRLYYGRSYLNAFEVEQDIVPKPRASLHNISGLKMYFGCQVSTQTLLTLWSAQD 122
Query: 358 AILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHPR 480
++ G G+RKL F + +Y+L+LSY++IWQI L P+
Sbjct: 123 VSVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQ 163
>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
Length = 1116
Score = 150 bits (379), Expect = 2e-34
Identities = 83/159 (52%), Positives = 110/159 (69%)
Frame = +1
Query: 1 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 180
IQV GFP +SAE VK FLEN+TG GTVYAL+++Q+K R R+FA VQF + +SAE I
Sbjct: 5 IQVFGFPYLLSAEAVKKFLENHTGNGTVYALEVKQSKGGR---RAFAKVQFANNKSAEFI 61
Query: 181 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 360
L ++ LYYG SYLK EMK DIV +PRT + ++ L+FGCQIS++KF+ L D
Sbjct: 62 IDLASKGLYYGPSYLKAWEMKTDIV-QPRTYVEHMDGVTLNFGCQISDKKFAVL-GSKDV 119
Query: 361 ILNVGFGLRKLEFLLTHRHMEYKLDLSYDSIWQIQLRHP 477
+ G GL+K+ F L+H +YKL LSY++IWQ+ L P
Sbjct: 120 SIKFGIGLKKIYFFLSHASADYKLQLSYENIWQVVLHRP 158