BLASTX nr result
ID: Akebia27_contig00022557
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00022557
(731 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCH50976.1| T4.15 [Malus x robusta] 54 3e-13
gb|ABB00038.1| reverse transcriptase family member [Glycine max] 50 4e-11
gb|AAT40504.2| Polyprotein, putative [Solanum demissum] 46 3e-09
gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis] 46 5e-09
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ... 45 2e-08
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840... 44 6e-08
gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DN... 46 1e-06
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 42 2e-06
>emb|CCH50976.1| T4.15 [Malus x robusta]
Length = 986
Score = 53.9 bits (128), Expect(2) = 3e-13
Identities = 24/56 (42%), Positives = 39/56 (69%)
Frame = +3
Query: 24 GISSKLVIWRDKLETYGFKISRADTEHMQCKFGQDTSRN*TLVKIKRQAIPQSGHF 191
G+++KL +WR+ LE+ G ++SR+ TE+M+CKF + +N V+I Q IP+S F
Sbjct: 742 GVNAKLNLWREVLESKGLRLSRSKTEYMECKFSANGGQNELGVRIGDQEIPKSDRF 797
Score = 47.8 bits (112), Expect(2) = 3e-13
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Frame = +1
Query: 286 VLCDGQVSIKLKICFSFNKKTIQPVMLDEAKCWAVC-VHVPRMSIIE*EV-----GY*DK 447
VLCD ++ +KLK F + I+P ML +CWAV HV +M + E + G+
Sbjct: 831 VLCDRRMPLKLK--GKFYRTAIRPAMLYGTECWAVKHQHVHKMGVAEMRMLRWMCGH--- 885
Query: 448 *LVSLQRQN*KRVYLR-KLRISSNRRTIMENYFRWFGHARRRPIITLMTMCCSMMQFES* 624
++ + +R K+ ++ + + EN RWFGH +RRP + C + +
Sbjct: 886 ----TRKDKIRNEDIRGKVGVAEIQGKMRENQLRWFGHVQRRPTDAPIRRCDYGTEVQGR 941
Query: 625 KGNRKIENDMNEDGKKIYE 681
+G + + E +K E
Sbjct: 942 RGRGRPRKTLEETLRKDLE 960
>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
Length = 377
Score = 49.7 bits (117), Expect(2) = 4e-11
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Frame = +1
Query: 286 VLCDGQVSIKLKICFSFNKKTIQPVMLDEAKCWAV-CVHVPRMSIIE*EVGY*DK*LVSL 462
VLCD +V IKLK F + ++P +L +CWAV H ++ + E + + +
Sbjct: 223 VLCDAKVPIKLK--GKFYRTAVRPTILYGTECWAVKSQHENKVGVAEMRML---RWMCGK 277
Query: 463 QRQN*KR--VYLRKLRISSNRRTIMENYFRWFGHARRRPIITLMTMCCSMMQFES*KGNR 636
RQ+ R ++ ++ ++EN RWFGH RRP+ +++ M + ++ +G
Sbjct: 278 TRQDKIRNEAIRERVGVAPIVEKMVENRLRWFGHVERRPVDSVLRRVDQMERRQTIRGRG 337
Query: 637 KIENDMNEDGKKIYEEACLD 696
+ + + E KK E LD
Sbjct: 338 RPKKTIREVIKKDLEINGLD 357
Score = 44.7 bits (104), Expect(2) = 4e-11
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +3
Query: 27 ISSKLVIWRDKLETYGFKISRADTEHMQCKFGQDTSRN*TLVKIKRQAIPQSGHF 191
++ +L WR LET+GF++SR+ +E+M+C+F + N + VKI IPQ F
Sbjct: 136 LNERLETWRRALETHGFRLSRSKSEYMECQFNKRRVSN-SEVKIGDHIIPQVTRF 189
>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
Length = 868
Score = 46.2 bits (108), Expect(2) = 3e-09
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +3
Query: 27 ISSKLVIWRDKLETYGFKISRADTEHMQCKFGQDTSRN*TLVKIKRQAIPQSGHF 191
++++L +WR LE+ GF++SR TE++ CKF V++ Q IP+ F
Sbjct: 451 VNARLEVWRQTLESKGFRLSRTKTEYLGCKFSDGLDETDVEVRLAAQVIPKKESF 505
Score = 42.0 bits (97), Expect(2) = 3e-09
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 18/122 (14%)
Frame = +1
Query: 259 VDEDEEHSI------------VLCDGQVSIKLKICFSFNKKTIQPVMLDEAKCWAVC--- 393
+D+D H + VLCD ++S KLK F + ++P +L A+CW V
Sbjct: 518 IDDDVTHRVGAAWMKWRLASGVLCDKKISPKLK--GKFYRVVVRPALLYGAECWPVKNAH 575
Query: 394 ---VHVPRMSIIE*EVGY*DK*LVSLQRQN*KRVYLRKLRISSNRRTIMENYFRWFGHAR 564
+HV M ++ G+ + + V K+ ++S + E RWFGH +
Sbjct: 576 VHKMHVAEMRMLRWMCGH------TRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVK 629
Query: 565 RR 570
RR
Sbjct: 630 RR 631
>gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis]
Length = 670
Score = 45.8 bits (107), Expect(2) = 5e-09
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +3
Query: 24 GISSKLVIWRDKLETYGFKISRADTEHMQCKFGQDTSRN 140
G++ KL +W+ LET GFK+SR TE+M C+F ++++
Sbjct: 419 GVNRKLELWKQTLETKGFKLSRTKTEYMHCRFSNSSNQS 457
Score = 41.6 bits (96), Expect(2) = 5e-09
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 13/68 (19%)
Frame = +1
Query: 259 VDEDEEHSI------------VLCDGQVSIKLKICFSFNKKTIQPVMLDEAKCWAV-CVH 399
++ED EH I VLCD ++ IKLK F + I+P ML ++CWA+ H
Sbjct: 486 IEEDIEHRIKAGWVKWKNVTGVLCDVEMPIKLK--GKFYRTVIRPAMLYGSECWAIKRQH 543
Query: 400 VPRMSIIE 423
+ +MS+IE
Sbjct: 544 IAKMSVIE 551
>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
jockey-like [Brachypodium distachyon]
Length = 307
Score = 45.1 bits (105), Expect(2) = 2e-08
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 24 GISSKLVIWRDKLETYGFKISRADTEHMQCKFGQDT-SRN*TLVKIKRQAIPQSGHF 191
G++ KL +WR LE+ GF++SR TE+M+C F T V + Q +PQ F
Sbjct: 64 GVNRKLELWRQTLESKGFRLSRTKTEYMKCGFSTTTPEEEEEEVSLDGQVVPQKDTF 120
Score = 40.0 bits (92), Expect(2) = 2e-08
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Frame = +1
Query: 259 VDEDEEHSI------------VLCDGQVSIKLKICFSFNKKTIQPVMLDEAKCWAVCV-H 399
+DED H I +LCD +V KLK F + I+P +L A+CW H
Sbjct: 133 IDEDVNHRIKAGWMKWRQASGILCDKRVPQKLK--GKFYRTAIRPAILYGAECWPTKRRH 190
Query: 400 VPRMSIIE*EVGY*DK*LVSLQRQN*KRVYLR------KLRISSNRRTIMENYFRWFGHA 561
V ++ + E ++ + +R ++R ++ ++ ++++ RWFGH
Sbjct: 191 VQQLGVAEMR-------MLRWMCGHTRRDHVRNDDIRDRVGVAPIAEKLVQHRLRWFGHI 243
Query: 562 RRRPI 576
+RRP+
Sbjct: 244 QRRPL 248
>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
distachyon]
Length = 567
Score = 44.3 bits (103), Expect(2) = 6e-08
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 24 GISSKLVIWRDKLETYGFKISRADTEHMQCKFGQDT-SRN*TLVKIKRQAIPQSGHF 191
G++ KL +WR LE+ GF++SR TE+M+C F T V + Q +PQ F
Sbjct: 324 GVNRKLELWRQILESKGFRLSRTKTEYMKCGFSTTTPEEEEEEVSLDGQVVPQKDTF 380
Score = 39.3 bits (90), Expect(2) = 6e-08
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Frame = +1
Query: 259 VDEDEEHSI------------VLCDGQVSIKLKICFSFNKKTIQPVMLDEAKCWAVCV-H 399
+DED H I +LCD +V KLK F + I+P +L A+CW H
Sbjct: 393 IDEDVNHRIKAGWMKWRQASGILCDKRVPQKLK--GKFYRTAIRPAILYGAECWPTKRRH 450
Query: 400 VPRMSIIE*EV-----GY*DK*LVSLQRQN*KRVYLR-KLRISSNRRTIMENYFRWFGHA 561
V ++ + E + G+ +R + +R ++ ++ ++++ RWFGH
Sbjct: 451 VQQLGVAEMRMLRWMCGH-------TRRDRVRNDDIRDRVGVAPIAEKLVQHRLRWFGHI 503
Query: 562 RRRPI 576
+RRP+
Sbjct: 504 QRRPL 508
>gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DNA-binding,
putative [Medicago truncatula]
Length = 195
Score = 46.2 bits (108), Expect(2) = 1e-06
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +3
Query: 27 ISSKLVIWRDKLETYGFKISRADTEHMQCKFGQDTSRN*TLVKIKRQAIPQSGHF 191
++ +L WR LE YGF++SR+ TE+M+ F SR+ VK+ IPQ F
Sbjct: 27 VNGRLETWRQALEAYGFRLSRSKTEYMEWNFSGRRSRSTLEVKVGDHIIPQVTRF 81
Score = 33.1 bits (74), Expect(2) = 1e-06
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 286 VLCDGQVSIKLKICFSFNKKTIQPVMLDEAKCWAV-CVHVPRMSIIE 423
VLCD +V +KLK F + I+P +L +CWAV H ++S+ E
Sbjct: 115 VLCDKKVPLKLK--GKFYRTAIRPALLYGTECWAVKSQHENQVSVTE 159
>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 882
Score = 42.0 bits (97), Expect(2) = 2e-06
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +3
Query: 24 GISSKLVIWRDKLETYGFKISRADTEHMQCKFGQDTSRN*TLVKIKRQAIPQSGHF 191
G++ KL +WR LE+ GF++SR TE+M C F T V + Q +P+ F
Sbjct: 274 GVNRKLELWRQTLESKGFRLSRTKTEYMMCGF-STTRCEEEEVSLDGQVVPRKDTF 328
Score = 36.6 bits (83), Expect(2) = 2e-06
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 18/123 (14%)
Frame = +1
Query: 259 VDEDEEHSI------------VLCDGQVSIKLKICFSFNKKTIQPVMLDEAKCWAV---- 390
+DED H I +LCD +V KLK F + ++P ML A+CW
Sbjct: 341 IDEDVNHRIKAGWMKWRQASGILCDKRVPQKLK--GKFYRTVVRPAMLYGAECWPTKRRH 398
Query: 391 --CVHVPRMSIIE*EVGY*DK*LVSLQRQN*KRVYLRKLRISSNRRTIMENYFRWFGHAR 564
+ V M ++ G+ K V R + R ++ ++ ++++ RWFGH +
Sbjct: 399 VQQLDVAEMCMLRCMCGHTRKDRV---RNDDIR---DRVGVAPIEEKLVQHRLRWFGHIQ 452
Query: 565 RRP 573
RP
Sbjct: 453 HRP 455