BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00022291
         (498 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16283.3| unnamed protein product [Vitis vinifera]              131   1e-28
ref|XP_002284994.1| PREDICTED: general transcription factor IIH ...   131   1e-28
gb|EXB98563.1| General transcription factor IIH subunit 2 [Morus...   121   1e-25
ref|XP_006363939.1| PREDICTED: general transcription factor IIH ...   120   3e-25
ref|XP_006363938.1| PREDICTED: general transcription factor IIH ...   120   3e-25
ref|XP_004493385.1| PREDICTED: general transcription factor IIH ...   120   3e-25
ref|XP_007205253.1| hypothetical protein PRUPE_ppa006259mg [Prun...   119   4e-25
ref|XP_004237420.1| PREDICTED: general transcription factor IIH ...   118   7e-25
ref|XP_003554116.1| PREDICTED: general transcription factor IIH ...   117   1e-24
gb|ACU17743.1| unknown [Glycine max]                                  117   1e-24
ref|XP_003537621.1| PREDICTED: general transcription factor IIH ...   117   2e-24
gb|EYU18861.1| hypothetical protein MIMGU_mgv1a007041mg [Mimulus...   117   2e-24
ref|XP_006489789.1| PREDICTED: general transcription factor IIH ...   116   3e-24
ref|XP_006489788.1| PREDICTED: general transcription factor IIH ...   116   3e-24
ref|XP_006420615.1| hypothetical protein CICLE_v10005033mg [Citr...   116   3e-24
ref|XP_007015448.1| General transcription factor II H2 isoform 1...   116   3e-24
ref|XP_004309875.1| PREDICTED: TFIIH basal transcription factor ...   116   3e-24
ref|XP_006491820.1| PREDICTED: general transcription factor IIH ...   115   5e-24
ref|XP_006428490.1| hypothetical protein CICLE_v10011800mg [Citr...   115   5e-24
ref|XP_007162073.1| hypothetical protein PHAVU_001G121400g [Phas...   115   6e-24

>emb|CBI16283.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  131 bits (329), Expect = 1e-28
 Identities = 67/93 (72%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
 Frame = -3

Query: 277 EKRQLNAXXXXXXXXXXEGNGRGMEAWERAYADERSWESLQEDESGLLRPIDNNILQHTQ 98
           E R+L+           EGNGRG++AWERAYADERSWESLQEDESGLLRPIDN  + H Q
Sbjct: 74  EGRRLDGEEEEEEEDEDEGNGRGLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQ 133

Query: 97  YRRRLRSL-AATSTARIQKGLIRYLYIVVDLSR 2
           YRRR+RSL ++T+TARIQKGLIRYLYIVVDLSR
Sbjct: 134 YRRRIRSLYSSTTTARIQKGLIRYLYIVVDLSR 166


>ref|XP_002284994.1| PREDICTED: general transcription factor IIH subunit 2 [Vitis
           vinifera]
          Length = 433

 Score =  131 bits (329), Expect = 1e-28
 Identities = 67/93 (72%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
 Frame = -3

Query: 277 EKRQLNAXXXXXXXXXXEGNGRGMEAWERAYADERSWESLQEDESGLLRPIDNNILQHTQ 98
           E R+L+           EGNGRG++AWERAYADERSWESLQEDESGLLRPIDN  + H Q
Sbjct: 13  EGRRLDGEEEEEEEDEDEGNGRGLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQ 72

Query: 97  YRRRLRSL-AATSTARIQKGLIRYLYIVVDLSR 2
           YRRR+RSL ++T+TARIQKGLIRYLYIVVDLSR
Sbjct: 73  YRRRIRSLYSSTTTARIQKGLIRYLYIVVDLSR 105


>gb|EXB98563.1| General transcription factor IIH subunit 2 [Morus notabilis]
          Length = 423

 Score =  121 bits (303), Expect = 1e-25
 Identities = 63/97 (64%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
 Frame = -3

Query: 289 SRNVEKRQLN-AXXXXXXXXXXEGNGRGMEAWERAYADERSWESLQEDESGLLRPIDNNI 113
           + N E+R+LN A          +GNGRG+EAWER YADERSWESLQEDESGLLRPIDN  
Sbjct: 2   NNNGEERRLNGAAEDDDDDEDDDGNGRGLEAWERTYADERSWESLQEDESGLLRPIDNKT 61

Query: 112 LQHTQYRRRLRSLAATSTARIQKGLIRYLYIVVDLSR 2
             H QYRRRLRS    S  RIQKGLIRYL++V+DLS+
Sbjct: 62  FYHAQYRRRLRS---ASAVRIQKGLIRYLFLVIDLSK 95


>ref|XP_006363939.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
           X2 [Solanum tuberosum]
          Length = 369

 Score =  120 bits (300), Expect = 3e-25
 Identities = 59/73 (80%), Positives = 62/73 (84%)
 Frame = -3

Query: 220 NGRGMEAWERAYADERSWESLQEDESGLLRPIDNNILQHTQYRRRLRSLAATSTARIQKG 41
           NGRG EAWER YADERSWESLQEDESGLLRPIDN  L H QYRRRLR+  A   ARIQKG
Sbjct: 18  NGRGREAWERTYADERSWESLQEDESGLLRPIDNTTLSHAQYRRRLRTATA---ARIQKG 74

Query: 40  LIRYLYIVVDLSR 2
           LIRYLYI++DLSR
Sbjct: 75  LIRYLYIIIDLSR 87


>ref|XP_006363938.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
           X1 [Solanum tuberosum]
          Length = 414

 Score =  120 bits (300), Expect = 3e-25
 Identities = 59/73 (80%), Positives = 62/73 (84%)
 Frame = -3

Query: 220 NGRGMEAWERAYADERSWESLQEDESGLLRPIDNNILQHTQYRRRLRSLAATSTARIQKG 41
           NGRG EAWER YADERSWESLQEDESGLLRPIDN  L H QYRRRLR+  A   ARIQKG
Sbjct: 18  NGRGREAWERTYADERSWESLQEDESGLLRPIDNTTLSHAQYRRRLRTATA---ARIQKG 74

Query: 40  LIRYLYIVVDLSR 2
           LIRYLYI++DLSR
Sbjct: 75  LIRYLYIIIDLSR 87


>ref|XP_004493385.1| PREDICTED: general transcription factor IIH subunit 2-like [Cicer
           arietinum]
          Length = 422

 Score =  120 bits (300), Expect = 3e-25
 Identities = 58/74 (78%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
 Frame = -3

Query: 220 NGRGMEAWERAYADERSWESLQEDESGLLRPIDNNILQHTQYRRRLRSLAAT-STARIQK 44
           NG G+EAWERAY ++RSWESLQEDESGLLRPID   + H QYRRRLR+LAAT +TARIQK
Sbjct: 23  NGDGLEAWERAYTEDRSWESLQEDESGLLRPIDTTAIHHAQYRRRLRALAATAATARIQK 82

Query: 43  GLIRYLYIVVDLSR 2
           GLIRY+YIVVDLS+
Sbjct: 83  GLIRYMYIVVDLSK 96


>ref|XP_007205253.1| hypothetical protein PRUPE_ppa006259mg [Prunus persica]
           gi|462400895|gb|EMJ06452.1| hypothetical protein
           PRUPE_ppa006259mg [Prunus persica]
          Length = 420

 Score =  119 bits (298), Expect = 4e-25
 Identities = 63/94 (67%), Positives = 71/94 (75%)
 Frame = -3

Query: 283 NVEKRQLNAXXXXXXXXXXEGNGRGMEAWERAYADERSWESLQEDESGLLRPIDNNILQH 104
           N E+R+LN             NG G+ AWERAYADERSWESLQEDESGLL+PIDN  L+H
Sbjct: 3   NGEQRRLNGEAEEDEEEDDANNG-GLAAWERAYADERSWESLQEDESGLLQPIDNQSLKH 61

Query: 103 TQYRRRLRSLAATSTARIQKGLIRYLYIVVDLSR 2
            QYRRRLR   A STARIQKGLIRY+YIV+DLS+
Sbjct: 62  AQYRRRLR---AASTARIQKGLIRYVYIVIDLSK 92


>ref|XP_004237420.1| PREDICTED: general transcription factor IIH subunit 2-like [Solanum
           lycopersicum]
          Length = 414

 Score =  118 bits (296), Expect = 7e-25
 Identities = 58/73 (79%), Positives = 61/73 (83%)
 Frame = -3

Query: 220 NGRGMEAWERAYADERSWESLQEDESGLLRPIDNNILQHTQYRRRLRSLAATSTARIQKG 41
           NGRG EAWER YADERSWESLQEDESGLLRPIDN  L H QYRRRLR+  A   ARIQKG
Sbjct: 18  NGRGREAWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYRRRLRTATA---ARIQKG 74

Query: 40  LIRYLYIVVDLSR 2
           LIRYLYI++D SR
Sbjct: 75  LIRYLYIIIDFSR 87


>ref|XP_003554116.1| PREDICTED: general transcription factor IIH subunit 2 [Glycine max]
          Length = 420

 Score =  117 bits (294), Expect = 1e-24
 Identities = 62/95 (65%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
 Frame = -3

Query: 283 NVEKRQLNAXXXXXXXXXXEGNGRGMEAWERAYADERSWESLQEDESGLLRPIDNNILQH 104
           NV +R LN             +G G+EAWER YA++RSWE+LQEDESGLLRPID   + H
Sbjct: 3   NVAERPLNGDVEDDDED----DGGGLEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYH 58

Query: 103 TQYRRRLRSLAAT-STARIQKGLIRYLYIVVDLSR 2
            QYRRRLR+LAAT +TARIQKGLIRYLYIVVDLS+
Sbjct: 59  AQYRRRLRTLAATAATARIQKGLIRYLYIVVDLSK 93


>gb|ACU17743.1| unknown [Glycine max]
          Length = 214

 Score =  117 bits (294), Expect = 1e-24
 Identities = 62/95 (65%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
 Frame = -3

Query: 283 NVEKRQLNAXXXXXXXXXXEGNGRGMEAWERAYADERSWESLQEDESGLLRPIDNNILQH 104
           NV +R LN             +G G+EAWER YA++RSWE+LQEDESGLLRPID   + H
Sbjct: 3   NVAERPLNGDVEDDDED----DGGGLEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYH 58

Query: 103 TQYRRRLRSLAAT-STARIQKGLIRYLYIVVDLSR 2
            QYRRRLR+LAAT +TARIQKGLIRYLYIVVDLS+
Sbjct: 59  AQYRRRLRTLAATAATARIQKGLIRYLYIVVDLSK 93


>ref|XP_003537621.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
           X1 [Glycine max] gi|571487648|ref|XP_006590708.1|
           PREDICTED: general transcription factor IIH subunit
           2-like isoform X2 [Glycine max]
           gi|571487650|ref|XP_006590709.1| PREDICTED: general
           transcription factor IIH subunit 2-like isoform X3
           [Glycine max] gi|571487652|ref|XP_006590710.1|
           PREDICTED: general transcription factor IIH subunit
           2-like isoform X4 [Glycine max]
           gi|571487654|ref|XP_006590711.1| PREDICTED: general
           transcription factor IIH subunit 2-like isoform X5
           [Glycine max]
          Length = 419

 Score =  117 bits (293), Expect = 2e-24
 Identities = 57/74 (77%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
 Frame = -3

Query: 220 NGRGMEAWERAYADERSWESLQEDESGLLRPIDNNILQHTQYRRRLRSLAAT-STARIQK 44
           +G G+EAWER YA++RSWE+LQEDESGLLRPID   + H QYRRRLR+LAAT +TARIQK
Sbjct: 20  DGGGLEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQK 79

Query: 43  GLIRYLYIVVDLSR 2
           GLIRYLYIVVDLS+
Sbjct: 80  GLIRYLYIVVDLSK 93


>gb|EYU18861.1| hypothetical protein MIMGU_mgv1a007041mg [Mimulus guttatus]
          Length = 422

 Score =  117 bits (292), Expect = 2e-24
 Identities = 57/73 (78%), Positives = 63/73 (86%)
 Frame = -3

Query: 220 NGRGMEAWERAYADERSWESLQEDESGLLRPIDNNILQHTQYRRRLRSLAATSTARIQKG 41
           +G+G EAWER YADERSWESLQEDESGLLRPIDN  L H QYRRRLR+   ++T RIQKG
Sbjct: 26  DGKGREAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRT---STTTRIQKG 82

Query: 40  LIRYLYIVVDLSR 2
           LIRYLYIV+DLSR
Sbjct: 83  LIRYLYIVIDLSR 95


>ref|XP_006489789.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
           X2 [Citrus sinensis]
          Length = 387

 Score =  116 bits (291), Expect = 3e-24
 Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
 Frame = -3

Query: 286 RNVEKRQLNAXXXXXXXXXXEGNGRGMEAWERAYADERSWESLQEDESGLLRPIDNNILQ 107
           +N E+ +LN             NG G+EAWER+YAD+RSWE+LQEDESG LRPIDN+ + 
Sbjct: 2   KNSERSRLNGEAEEEDDEEENLNG-GLEAWERSYADDRSWEALQEDESGFLRPIDNSAIY 60

Query: 106 HTQYRRRLRSLAAT-STARIQKGLIRYLYIVVDLSR 2
           H QYRRRLR  + T +TARIQKGLIRYLYIV+DLSR
Sbjct: 61  HAQYRRRLRGRSLTAATARIQKGLIRYLYIVIDLSR 96


>ref|XP_006489788.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
           X1 [Citrus sinensis]
          Length = 424

 Score =  116 bits (291), Expect = 3e-24
 Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
 Frame = -3

Query: 286 RNVEKRQLNAXXXXXXXXXXEGNGRGMEAWERAYADERSWESLQEDESGLLRPIDNNILQ 107
           +N E+ +LN             NG G+EAWER+YAD+RSWE+LQEDESG LRPIDN+ + 
Sbjct: 2   KNSERSRLNGEAEEEDDEEENLNG-GLEAWERSYADDRSWEALQEDESGFLRPIDNSAIY 60

Query: 106 HTQYRRRLRSLAAT-STARIQKGLIRYLYIVVDLSR 2
           H QYRRRLR  + T +TARIQKGLIRYLYIV+DLSR
Sbjct: 61  HAQYRRRLRGRSLTAATARIQKGLIRYLYIVIDLSR 96


>ref|XP_006420615.1| hypothetical protein CICLE_v10005033mg [Citrus clementina]
           gi|557522488|gb|ESR33855.1| hypothetical protein
           CICLE_v10005033mg [Citrus clementina]
          Length = 424

 Score =  116 bits (291), Expect = 3e-24
 Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
 Frame = -3

Query: 286 RNVEKRQLNAXXXXXXXXXXEGNGRGMEAWERAYADERSWESLQEDESGLLRPIDNNILQ 107
           +N E+ +LN             NG G+EAWER+YAD+RSWE+LQEDESG LRPIDN+ + 
Sbjct: 2   KNSERSRLNGEAEEEDDEEENLNG-GLEAWERSYADDRSWEALQEDESGFLRPIDNSAIY 60

Query: 106 HTQYRRRLRSLAAT-STARIQKGLIRYLYIVVDLSR 2
           H QYRRRLR  + T +TARIQKGLIRYLYIV+DLSR
Sbjct: 61  HAQYRRRLRGRSLTVATARIQKGLIRYLYIVIDLSR 96


>ref|XP_007015448.1| General transcription factor II H2 isoform 1 [Theobroma cacao]
           gi|590585467|ref|XP_007015449.1| General transcription
           factor II H2 isoform 1 [Theobroma cacao]
           gi|590585471|ref|XP_007015450.1| General transcription
           factor II H2 isoform 1 [Theobroma cacao]
           gi|508785811|gb|EOY33067.1| General transcription factor
           II H2 isoform 1 [Theobroma cacao]
           gi|508785812|gb|EOY33068.1| General transcription factor
           II H2 isoform 1 [Theobroma cacao]
           gi|508785813|gb|EOY33069.1| General transcription factor
           II H2 isoform 1 [Theobroma cacao]
          Length = 420

 Score =  116 bits (291), Expect = 3e-24
 Identities = 56/70 (80%), Positives = 64/70 (91%), Gaps = 1/70 (1%)
 Frame = -3

Query: 208 MEAWERAYADERSWESLQEDESGLLRPIDNNILQHTQYRRRLRSLAATST-ARIQKGLIR 32
           ++AWER Y DERSWESLQEDESGLLRPIDN  L H+QYRRRLRSL++T+T ARIQKGLIR
Sbjct: 26  LDAWERTYTDERSWESLQEDESGLLRPIDNKALYHSQYRRRLRSLSSTATAARIQKGLIR 85

Query: 31  YLYIVVDLSR 2
           YLY+V+DLSR
Sbjct: 86  YLYLVIDLSR 95


>ref|XP_004309875.1| PREDICTED: TFIIH basal transcription factor complex p47
           subunit-like [Fragaria vesca subsp. vesca]
          Length = 420

 Score =  116 bits (291), Expect = 3e-24
 Identities = 58/73 (79%), Positives = 62/73 (84%)
 Frame = -3

Query: 220 NGRGMEAWERAYADERSWESLQEDESGLLRPIDNNILQHTQYRRRLRSLAATSTARIQKG 41
           N  G+ AWERAYADERSWESLQEDESGLLRPIDN  L H QYRRRLR   A +TARIQKG
Sbjct: 22  NNDGLAAWERAYADERSWESLQEDESGLLRPIDNQSLHHAQYRRRLR---AATTARIQKG 78

Query: 40  LIRYLYIVVDLSR 2
           LIRYLYIV+DLS+
Sbjct: 79  LIRYLYIVIDLSK 91


>ref|XP_006491820.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
           X1 [Citrus sinensis] gi|568877611|ref|XP_006491821.1|
           PREDICTED: general transcription factor IIH subunit
           2-like isoform X2 [Citrus sinensis]
           gi|568877613|ref|XP_006491822.1| PREDICTED: general
           transcription factor IIH subunit 2-like isoform X3
           [Citrus sinensis] gi|568877615|ref|XP_006491823.1|
           PREDICTED: general transcription factor IIH subunit
           2-like isoform X4 [Citrus sinensis]
          Length = 425

 Score =  115 bits (289), Expect = 5e-24
 Identities = 61/96 (63%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
 Frame = -3

Query: 283 NVEKRQLNAXXXXXXXXXXEGNGRGMEAWERAYADERSWESLQEDESGLLRPIDNNILQH 104
           N E+++LN           +    G+EAWER+YAD+RSWE+LQEDESG LRPIDN+   H
Sbjct: 3   NSERKRLNGEAEEEEEDEDDNLNGGLEAWERSYADDRSWEALQEDESGFLRPIDNSAFYH 62

Query: 103 TQYRRRL--RSLAATSTARIQKGLIRYLYIVVDLSR 2
            QYRRRL  RSL AT TARIQKGLIRYLYIV+DLSR
Sbjct: 63  AQYRRRLRDRSLVAT-TARIQKGLIRYLYIVIDLSR 97


>ref|XP_006428490.1| hypothetical protein CICLE_v10011800mg [Citrus clementina]
           gi|567871805|ref|XP_006428492.1| hypothetical protein
           CICLE_v10011800mg [Citrus clementina]
           gi|557530547|gb|ESR41730.1| hypothetical protein
           CICLE_v10011800mg [Citrus clementina]
           gi|557530549|gb|ESR41732.1| hypothetical protein
           CICLE_v10011800mg [Citrus clementina]
          Length = 425

 Score =  115 bits (289), Expect = 5e-24
 Identities = 61/96 (63%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
 Frame = -3

Query: 283 NVEKRQLNAXXXXXXXXXXEGNGRGMEAWERAYADERSWESLQEDESGLLRPIDNNILQH 104
           N E+++LN           +    G+EAWER+YAD+RSWE+LQEDESG LRPIDN+   H
Sbjct: 3   NSERKRLNGEAEEEEEDEDDNLNGGLEAWERSYADDRSWEALQEDESGFLRPIDNSAFYH 62

Query: 103 TQYRRRL--RSLAATSTARIQKGLIRYLYIVVDLSR 2
            QYRRRL  RSL AT TARIQKGLIRYLYIV+DLSR
Sbjct: 63  AQYRRRLRDRSLVAT-TARIQKGLIRYLYIVIDLSR 97


>ref|XP_007162073.1| hypothetical protein PHAVU_001G121400g [Phaseolus vulgaris]
           gi|561035537|gb|ESW34067.1| hypothetical protein
           PHAVU_001G121400g [Phaseolus vulgaris]
          Length = 420

 Score =  115 bits (288), Expect = 6e-24
 Identities = 61/95 (64%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
 Frame = -3

Query: 283 NVEKRQLNAXXXXXXXXXXEGNGRGMEAWERAYADERSWESLQEDESGLLRPIDNNILQH 104
           NV +R LN             +G  +EAWER YA++RSWE+LQEDESGLLRPID   + H
Sbjct: 3   NVAERPLNGDVEDDDED----DGADLEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYH 58

Query: 103 TQYRRRLRSLAAT-STARIQKGLIRYLYIVVDLSR 2
            QYRRRLR+LAAT +TARIQKGLIRYLYIVVDLS+
Sbjct: 59  AQYRRRLRTLAATAATARIQKGLIRYLYIVVDLSK 93