BLASTX nr result
ID: Akebia27_contig00021545
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia27_contig00021545 (794 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarp... 204 2e-50 ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 204 2e-50 ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr... 201 3e-49 ref|XP_007027347.1| RNA-binding family protein isoform 2 [Theobr... 201 3e-49 ref|XP_007027346.1| RNA-binding family protein isoform 1 [Theobr... 201 3e-49 gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis] 198 2e-48 ref|XP_004958419.1| PREDICTED: ribonucleoprotein At2g37220, chlo... 197 3e-48 ref|XP_007205644.1| hypothetical protein PRUPE_ppa009295mg [Prun... 195 1e-47 ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarp... 195 1e-47 ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group] g... 195 2e-47 ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 195 2e-47 gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indi... 195 2e-47 gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Mimulus... 194 2e-47 gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativ... 194 2e-47 sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,... 194 3e-47 ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri... 194 3e-47 sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c... 192 2e-46 ref|XP_006658862.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 191 3e-46 ref|XP_002461076.1| hypothetical protein SORBIDRAFT_02g040260 [S... 191 3e-46 tpg|DAA63746.1| TPA: hypothetical protein ZEAMMB73_977373 [Zea m... 190 4e-46 >ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarpa] gi|222868100|gb|EEF05231.1| 29 kDa ribonucleoprotein [Populus trichocarpa] Length = 273 Score = 204 bits (520), Expect = 2e-50 Identities = 97/144 (67%), Positives = 125/144 (86%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGASVNGRN 182 SRGFGFVTM+T++EV+AA++Q NGYEL+GR LRVN+GPPP+KE S S+G R G + + N Sbjct: 130 SRGFGFVTMTTIEEVEAASKQFNGYELDGRTLRVNFGPPPQKESSFSRGPRGGETFDSGN 189 Query: 183 QVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAISS 362 +VYV NLSW VD+ LETLF E+GRV++AKV++DR+SGRSRGFGFVTYSS E+ +NAI S Sbjct: 190 RVYVGNLSWNVDNLALETLFREKGRVMDAKVVYDRDSGRSRGFGFVTYSSAEEVDNAIDS 249 Query: 363 LDGSELKGRSIRVNMAESKPRRQF 434 L+G+EL GR+IRV++AE+KPRRQF Sbjct: 250 LNGAELDGRAIRVSVAEAKPRRQF 273 Score = 68.9 bits (167), Expect = 2e-09 Identities = 33/74 (44%), Positives = 49/74 (66%) Frame = +3 Query: 183 QVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAISS 362 +++V NL + VD + L LF G V +VI+D+ +GRSRGFGFVT +++E+ A Sbjct: 91 KLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMTTIEEVEAASKQ 150 Query: 363 LDGSELKGRSIRVN 404 +G EL GR++RVN Sbjct: 151 FNGYELDGRTLRVN 164 >ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis vinifera] Length = 288 Score = 204 bits (520), Expect = 2e-50 Identities = 105/159 (66%), Positives = 123/159 (77%), Gaps = 15/159 (9%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPP---------------RKEDS 137 SRGFGFVTMSTV+EV+AAAQQ NGYELEGR LRVN GPPP R E++ Sbjct: 130 SRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNFRGENSNFRGENT 189 Query: 138 PSQGVRTGASVNGRNQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGF 317 +G R GA++N N++YV NLSWGVDD LETLFSEQG+V EA+VI+DRE+GRSRGFGF Sbjct: 190 NFRGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGF 249 Query: 318 VTYSSVEDANNAISSLDGSELKGRSIRVNMAESKPRRQF 434 VTY+S E+ N AI SLDG +L GRSIRV MAE++PRRQF Sbjct: 250 VTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPRRQF 288 Score = 75.1 bits (183), Expect = 3e-11 Identities = 37/83 (44%), Positives = 53/83 (63%) Frame = +3 Query: 183 QVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAISS 362 +++V NL + VD + L LF + G V +VI+D+ +GRSRGFGFVT S+VE+ A Sbjct: 91 KLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQ 150 Query: 363 LDGSELKGRSIRVNMAESKPRRQ 431 +G EL+GR +RVN RR+ Sbjct: 151 FNGYELEGRQLRVNSGPPPARRE 173 >ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] gi|568855826|ref|XP_006481497.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Citrus sinensis] gi|557530828|gb|ESR42011.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] Length = 282 Score = 201 bits (511), Expect = 3e-49 Identities = 106/149 (71%), Positives = 125/149 (83%), Gaps = 5/149 (3%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPP--RKEDSPS--QGVRTGASV 170 SRGFGFVTMS+V+EV+AAAQQ NGYELEGRPLRVN GPPP R+E SP +G GA Sbjct: 134 SRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPS 193 Query: 171 NGRNQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANN 350 +G N+VYV NLSWGVDD LETLF EQG+VLEAKV++DRESGRSRGFGFVTYSS E+ +N Sbjct: 194 SGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDN 253 Query: 351 AISSLDGSELKGRSIRVNMAESKP-RRQF 434 AI SL+G +L GR+IRV++AE++P RRQF Sbjct: 254 AIDSLNGVDLAGRAIRVSVAEARPQRRQF 282 Score = 79.0 bits (193), Expect = 2e-12 Identities = 40/91 (43%), Positives = 57/91 (62%) Frame = +3 Query: 159 GASVNGRNQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVE 338 G++ + +++V NL + VD + L LF G V +VI+D+ +GRSRGFGFVT SSVE Sbjct: 87 GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVE 146 Query: 339 DANNAISSLDGSELKGRSIRVNMAESKPRRQ 431 + A +G EL+GR +RVN PRR+ Sbjct: 147 EVEAAAQQFNGYELEGRPLRVNSGPPPPRRE 177 >ref|XP_007027347.1| RNA-binding family protein isoform 2 [Theobroma cacao] gi|508715952|gb|EOY07849.1| RNA-binding family protein isoform 2 [Theobroma cacao] Length = 157 Score = 201 bits (510), Expect = 3e-49 Identities = 100/145 (68%), Positives = 121/145 (83%), Gaps = 1/145 (0%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPP-RKEDSPSQGVRTGASVNGR 179 SRGFGFVTMST +EV+AAAQQ NGYELEGR LRVN GPPP R+E+ +G R ++ Sbjct: 13 SRGFGFVTMSTAEEVEAAAQQFNGYELEGRALRVNSGPPPPRREEFSPRGSRGAPALGAS 72 Query: 180 NQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAIS 359 N+VYV NLSWGVDD LETLFSEQG+V+EAKV++DRESGRSRGFGFVTY+S E+ ++AI Sbjct: 73 NRVYVGNLSWGVDDLALETLFSEQGKVVEAKVVYDRESGRSRGFGFVTYNSAEEVDSAIK 132 Query: 360 SLDGSELKGRSIRVNMAESKPRRQF 434 SL+G +L GR IRV++AES+PRRQF Sbjct: 133 SLNGVDLDGRPIRVSVAESRPRRQF 157 Score = 60.1 bits (144), Expect = 9e-07 Identities = 35/82 (42%), Positives = 50/82 (60%) Frame = +3 Query: 270 KVIFDRESGRSRGFGFVTYSSVEDANNAISSLDGSELKGRSIRVNMAESKPRRQF*SSDF 449 +VI+D+ +GRSRGFGFVT S+ E+ A +G EL+GR++RVN PRR+ +F Sbjct: 3 EVIYDKVTGRSRGFGFVTMSTAEEVEAAAQQFNGYELEGRALRVNSGPPPPRRE----EF 58 Query: 450 SN*LQSRSFLWFGASSTMVAGH 515 S SR GAS+ + G+ Sbjct: 59 SP-RGSRGAPALGASNRVYVGN 79 >ref|XP_007027346.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508715951|gb|EOY07848.1| RNA-binding family protein isoform 1 [Theobroma cacao] Length = 254 Score = 201 bits (510), Expect = 3e-49 Identities = 100/145 (68%), Positives = 121/145 (83%), Gaps = 1/145 (0%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPP-RKEDSPSQGVRTGASVNGR 179 SRGFGFVTMST +EV+AAAQQ NGYELEGR LRVN GPPP R+E+ +G R ++ Sbjct: 110 SRGFGFVTMSTAEEVEAAAQQFNGYELEGRALRVNSGPPPPRREEFSPRGSRGAPALGAS 169 Query: 180 NQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAIS 359 N+VYV NLSWGVDD LETLFSEQG+V+EAKV++DRESGRSRGFGFVTY+S E+ ++AI Sbjct: 170 NRVYVGNLSWGVDDLALETLFSEQGKVVEAKVVYDRESGRSRGFGFVTYNSAEEVDSAIK 229 Query: 360 SLDGSELKGRSIRVNMAESKPRRQF 434 SL+G +L GR IRV++AES+PRRQF Sbjct: 230 SLNGVDLDGRPIRVSVAESRPRRQF 254 Score = 62.0 bits (149), Expect = 2e-07 Identities = 37/88 (42%), Positives = 52/88 (59%) Frame = +3 Query: 252 GRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAISSLDGSELKGRSIRVNMAESKPRRQ 431 G V +VI+D+ +GRSRGFGFVT S+ E+ A +G EL+GR++RVN PRR+ Sbjct: 94 GNVEMVEVIYDKVTGRSRGFGFVTMSTAEEVEAAAQQFNGYELEGRALRVNSGPPPPRRE 153 Query: 432 F*SSDFSN*LQSRSFLWFGASSTMVAGH 515 +FS SR GAS+ + G+ Sbjct: 154 ----EFSP-RGSRGAPALGASNRVYVGN 176 >gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis] Length = 296 Score = 198 bits (503), Expect = 2e-48 Identities = 101/155 (65%), Positives = 124/155 (80%), Gaps = 11/155 (7%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPP-RKEDSPSQGVRTGASVNGR 179 SRGFGFVTMS++ EV+AAAQQ NGYELEGRPLRVNYGPPP R++DS +G R G G Sbjct: 142 SRGFGFVTMSSIDEVEAAAQQFNGYELEGRPLRVNYGPPPSREDDSFPRGRRGGGGGGGG 201 Query: 180 ----------NQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYS 329 N+VYV NLSWGVD++ LE+LFSEQG+VLEAKV++DR+SGRSRGFGFVTY+ Sbjct: 202 GGGGAGYETGNRVYVGNLSWGVDNAALESLFSEQGKVLEAKVVYDRDSGRSRGFGFVTYN 261 Query: 330 SVEDANNAISSLDGSELKGRSIRVNMAESKPRRQF 434 + ++ N+AI+SL+G +L GRSIRV AE+KPRR F Sbjct: 262 TADEVNSAINSLNGVDLNGRSIRVTHAEAKPRRSF 296 Score = 72.0 bits (175), Expect = 2e-10 Identities = 34/74 (45%), Positives = 49/74 (66%) Frame = +3 Query: 183 QVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAISS 362 +++V NL + VD + L LF G V +VI+D+ +GRSRGFGFVT SS+++ A Sbjct: 103 KLFVGNLPFSVDSAQLAGLFERTGNVEMVEVIYDKTTGRSRGFGFVTMSSIDEVEAAAQQ 162 Query: 363 LDGSELKGRSIRVN 404 +G EL+GR +RVN Sbjct: 163 FNGYELEGRPLRVN 176 >ref|XP_004958419.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Setaria italica] Length = 265 Score = 197 bits (502), Expect = 3e-48 Identities = 99/148 (66%), Positives = 116/148 (78%), Gaps = 4/148 (2%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGAS----V 170 SRGFGFVTMS+ +E AA +Q NGY +GRPLRVN GPPP ++DS + R G V Sbjct: 118 SRGFGFVTMSSAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDSAPRAPRGGGGGGNFV 177 Query: 171 NGRNQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANN 350 + N+VYV NLSWGVD+S LE LFSEQG+VL+AKVI+DRESGRSRGFGFVTY S E+ NN Sbjct: 178 DSGNKVYVGNLSWGVDNSTLENLFSEQGQVLDAKVIYDRESGRSRGFGFVTYGSAEEVNN 237 Query: 351 AISSLDGSELKGRSIRVNMAESKPRRQF 434 AIS+LDG +L GR IRV +AESKPRRQF Sbjct: 238 AISNLDGIDLDGRQIRVTVAESKPRRQF 265 Score = 76.3 bits (186), Expect = 1e-11 Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 13/149 (8%) Frame = +3 Query: 18 FVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGASVNGRNQ---- 185 F+ +S+ K A + L PLR P R + + V + G Q Sbjct: 14 FLALSSPKPAATVASAFLPFRL---PLRAVSAPGRRVFEPVAVAVSSEYETEGAEQEEEG 70 Query: 186 ---------VYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVE 338 ++V NL + VD + L LF + G V +V++DR +GRSRGFGFVT SS E Sbjct: 71 AEEFSEDLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAE 130 Query: 339 DANNAISSLDGSELKGRSIRVNMAESKPR 425 +A A+ +G +GR +RVN PR Sbjct: 131 EAGAAVEQFNGYTFQGRPLRVNSGPPPPR 159 >ref|XP_007205644.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica] gi|462401286|gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica] Length = 298 Score = 195 bits (496), Expect = 1e-47 Identities = 92/144 (63%), Positives = 116/144 (80%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGASVNGRN 182 SRGFGFVTMS+V+E + AA+QLNGYEL+GR LRVNYGPPP + + +G R G + N Sbjct: 155 SRGFGFVTMSSVQEAEGAARQLNGYELDGRALRVNYGPPPPRSEDSFRGARGGGGSDSSN 214 Query: 183 QVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAISS 362 ++YV NL+WGVD+ LE LFSEQG+VLEAKV++DR+SGRSRGFGFVTY + ++ N+A+ S Sbjct: 215 RLYVGNLAWGVDNLALENLFSEQGKVLEAKVVYDRDSGRSRGFGFVTYGTADEMNSAMES 274 Query: 363 LDGSELKGRSIRVNMAESKPRRQF 434 LDG +L GRSIRV AE +PRRQF Sbjct: 275 LDGVDLNGRSIRVTAAEPRPRRQF 298 Score = 79.3 bits (194), Expect = 1e-12 Identities = 39/83 (46%), Positives = 54/83 (65%) Frame = +3 Query: 183 QVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAISS 362 +++V NL + VD + L LF G V +VI+D+ +GRSRGFGFVT SSV++A A Sbjct: 116 KLFVGNLPFSVDSAQLAGLFESAGNVEMVEVIYDKTTGRSRGFGFVTMSSVQEAEGAARQ 175 Query: 363 LDGSELKGRSIRVNMAESKPRRQ 431 L+G EL GR++RVN PR + Sbjct: 176 LNGYELDGRALRVNYGPPPPRSE 198 >ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarpa] gi|550336149|gb|ERP59243.1| 29 kDa ribonucleoprotein [Populus trichocarpa] Length = 286 Score = 195 bits (496), Expect = 1e-47 Identities = 95/156 (60%), Positives = 125/156 (80%), Gaps = 12/156 (7%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQ------------ 146 SRGFGFVTMST++EV+AA+QQ NGYEL+GRPLRVN GPPP++E S S+ Sbjct: 131 SRGFGFVTMSTIEEVEAASQQFNGYELDGRPLRVNSGPPPQRETSFSRLPQRENSFSRGP 190 Query: 147 GVRTGASVNGRNQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTY 326 G R G + + N+VYV NLSW VDDS LE+LF E+G+V++AKV++DR+SGRS+GFGFVTY Sbjct: 191 GARGGETFDSSNRVYVGNLSWNVDDSALESLFREKGKVMDAKVVYDRDSGRSKGFGFVTY 250 Query: 327 SSVEDANNAISSLDGSELKGRSIRVNMAESKPRRQF 434 SS E+ +A+ SL+G+EL GR+IRV++AE+KPRR+F Sbjct: 251 SSAEEVEDAVDSLNGAELDGRAIRVSVAEAKPRRRF 286 Score = 69.3 bits (168), Expect = 2e-09 Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 7/136 (5%) Frame = +3 Query: 18 FVTMSTVKEVKAAAQQLNGYELEGRPLRVNY-------GPPPRKEDSPSQGVRTGASVNG 176 F+++S+ +K A+ L+ + + +PL + ++ED G S + Sbjct: 32 FLSLSSTSSIKPASLFLSFQQKQQQPLSSRFLKSVAISSEFGQEEDVFGDGDEPSFSPD- 90 Query: 177 RNQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAI 356 Q++V NL + V+ + L LF G V +V +D+ +GRSRGFGFVT S++E+ A Sbjct: 91 -LQLFVGNLPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGRSRGFGFVTMSTIEEVEAAS 149 Query: 357 SSLDGSELKGRSIRVN 404 +G EL GR +RVN Sbjct: 150 QQFNGYELDGRPLRVN 165 >ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group] gi|22296371|dbj|BAC10140.1| putative 29 kDa ribonucleoprotein A, chloroplast precursor [Oryza sativa Japonica Group] gi|113611900|dbj|BAF22278.1| Os07g0631900 [Oryza sativa Japonica Group] gi|125601192|gb|EAZ40768.1| hypothetical protein OsJ_25244 [Oryza sativa Japonica Group] Length = 264 Score = 195 bits (495), Expect = 2e-47 Identities = 97/145 (66%), Positives = 114/145 (78%), Gaps = 1/145 (0%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGAS-VNGR 179 SRGFGFVTMST +E AA +Q NGY +GRPLRVN GPPP ++D + R G S + Sbjct: 120 SRGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSS 179 Query: 180 NQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAIS 359 N++YV NL+WGVD+S LE LFSEQG VL+AKVI+DRESGRSRGFGFVTY S E+ NNAIS Sbjct: 180 NKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAIS 239 Query: 360 SLDGSELKGRSIRVNMAESKPRRQF 434 +LDG +L GR IRV +AESKPRRQF Sbjct: 240 NLDGVDLDGRQIRVTVAESKPRRQF 264 Score = 79.3 bits (194), Expect = 1e-12 Identities = 45/118 (38%), Positives = 62/118 (52%), Gaps = 4/118 (3%) Frame = +3 Query: 93 PLRVNYGPPPRKEDSPSQGVRTGASVNGRN----QVYVSNLSWGVDDSDLETLFSEQGRV 260 PLR P S + GA G +V+V NL + VD + L LF + G V Sbjct: 47 PLRRRLSPVAVAVSSEVEEEEGGAESEGEFAEDLKVFVGNLPFSVDSAQLAGLFEQAGSV 106 Query: 261 LEAKVIFDRESGRSRGFGFVTYSSVEDANNAISSLDGSELKGRSIRVNMAESKPRRQF 434 +V++DR++GRSRGFGFVT S+ E+A A+ +G +GR +RVN PR F Sbjct: 107 EMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDF 164 >ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis sativus] gi|449483348|ref|XP_004156563.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis sativus] Length = 278 Score = 195 bits (495), Expect = 2e-47 Identities = 98/146 (67%), Positives = 119/146 (81%), Gaps = 2/146 (1%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPP-RKEDSPSQGVRTGASVNGR 179 SRGFGFVTMSTV EV+AAAQQ NGYEL+GR LRVNYGPPP +++DS +G R + + R Sbjct: 133 SRGFGFVTMSTVGEVEAAAQQFNGYELDGRLLRVNYGPPPPKRDDSSFRGSRNASRFDNR 192 Query: 180 NQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAIS 359 N+V+VSNL+WGVDD LE LF E+G VLEAKV++DR+SG+SRGFGFVTY+S E+ N AI Sbjct: 193 NRVHVSNLAWGVDDLTLENLFREKGNVLEAKVVYDRDSGKSRGFGFVTYNSAEEVNEAIQ 252 Query: 360 SLDGSELKGRSIRVNMAESK-PRRQF 434 SLDG +L GR IRV AE++ PRRQF Sbjct: 253 SLDGVDLDGRPIRVTQAEARPPRRQF 278 Score = 72.8 bits (177), Expect = 1e-10 Identities = 36/82 (43%), Positives = 51/82 (62%) Frame = +3 Query: 183 QVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAISS 362 +++V NL + VD + L LF G+V +VI+D+ +GRSRGFGFVT S+V + A Sbjct: 94 KLFVGNLPFTVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSTVGEVEAAAQQ 153 Query: 363 LDGSELKGRSIRVNMAESKPRR 428 +G EL GR +RVN P+R Sbjct: 154 FNGYELDGRLLRVNYGPPPPKR 175 >gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indica Group] Length = 259 Score = 195 bits (495), Expect = 2e-47 Identities = 97/145 (66%), Positives = 114/145 (78%), Gaps = 1/145 (0%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGAS-VNGR 179 SRGFGFVTMST +E AA +Q NGY +GRPLRVN GPPP ++D + R G S + Sbjct: 115 SRGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSS 174 Query: 180 NQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAIS 359 N++YV NL+WGVD+S LE LFSEQG VL+AKVI+DRESGRSRGFGFVTY S E+ NNAIS Sbjct: 175 NKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAIS 234 Query: 360 SLDGSELKGRSIRVNMAESKPRRQF 434 +LDG +L GR IRV +AESKPRRQF Sbjct: 235 NLDGVDLDGRQIRVTVAESKPRRQF 259 Score = 78.2 bits (191), Expect = 3e-12 Identities = 37/84 (44%), Positives = 53/84 (63%) Frame = +3 Query: 183 QVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAISS 362 +V+V NL + VD + L LF + G V +V++DR++GRSRGFGFVT S+ E+A A+ Sbjct: 76 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 135 Query: 363 LDGSELKGRSIRVNMAESKPRRQF 434 +G +GR +RVN PR F Sbjct: 136 FNGYTFQGRPLRVNSGPPPPRDDF 159 >gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Mimulus guttatus] Length = 309 Score = 194 bits (494), Expect = 2e-47 Identities = 98/141 (69%), Positives = 117/141 (82%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGASVNGRN 182 SRGFGFVTMS++ E +AAAQQ NGYEL+GR LRVN GPPP K D+P G R +S N N Sbjct: 169 SRGFGFVTMSSLAEAEAAAQQFNGYELQGRALRVNSGPPPAKSDTPFGGPRRTSSGN-TN 227 Query: 183 QVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAISS 362 +VYV NLSWGVD+S LETLFSEQG+V EA+V++DRESGRSRGFGFVTYSS E+ N+AI + Sbjct: 228 RVYVGNLSWGVDNSALETLFSEQGQVQEARVVYDRESGRSRGFGFVTYSSPEEVNSAIEA 287 Query: 363 LDGSELKGRSIRVNMAESKPR 425 LDG++L GRSIRV+ AE +PR Sbjct: 288 LDGADLDGRSIRVSPAEERPR 308 Score = 72.8 bits (177), Expect = 1e-10 Identities = 36/74 (48%), Positives = 51/74 (68%) Frame = +3 Query: 183 QVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAISS 362 +++V NL + VD + L LF + G V +VI+D+ SGRSRGFGFVT SS+ +A A Sbjct: 130 KLFVGNLPFNVDSAALAGLFEQAGNVEMVEVIYDKLSGRSRGFGFVTMSSLAEAEAAAQQ 189 Query: 363 LDGSELKGRSIRVN 404 +G EL+GR++RVN Sbjct: 190 FNGYELQGRALRVN 203 >gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativa Indica Group] Length = 205 Score = 194 bits (494), Expect = 2e-47 Identities = 97/145 (66%), Positives = 114/145 (78%), Gaps = 1/145 (0%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGAS-VNGR 179 SRGFGFVTMST +E AA +Q NGY +GRPLRVN GPPP ++D + R G S + Sbjct: 61 SRGFGFVTMSTAEEAGAAIEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSS 120 Query: 180 NQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAIS 359 N++YV NL+WGVD+S LE LFSEQG VL+AKVI+DRESGRSRGFGFVTY S E+ NNAIS Sbjct: 121 NKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAIS 180 Query: 360 SLDGSELKGRSIRVNMAESKPRRQF 434 +LDG +L GR IRV +AESKPRRQF Sbjct: 181 NLDGVDLDGRQIRVTVAESKPRRQF 205 Score = 78.6 bits (192), Expect = 2e-12 Identities = 38/84 (45%), Positives = 53/84 (63%) Frame = +3 Query: 183 QVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAISS 362 +V+V NL + VD + L LF + G V +V++DR++GRSRGFGFVT S+ E+A AI Sbjct: 22 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAIEQ 81 Query: 363 LDGSELKGRSIRVNMAESKPRRQF 434 +G +GR +RVN PR F Sbjct: 82 FNGYTFQGRPLRVNSGPPPPRDDF 105 >sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName: Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris] Length = 273 Score = 194 bits (493), Expect = 3e-47 Identities = 98/147 (66%), Positives = 119/147 (80%), Gaps = 3/147 (2%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPS--QGVRTGASVNG 176 SRGFGFVTMS+ +EV+AA QQ NGYEL+GR LRVN GPPP K ++ S G R G S + Sbjct: 127 SRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDS 186 Query: 177 RNQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAI 356 N+VYV NL+WGVD LETLFSEQG+V++AKV++DR+SGRSRGFGFVTYSS E+ NNAI Sbjct: 187 SNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAI 246 Query: 357 SSLDGSELKGRSIRVNMAESK-PRRQF 434 SLDG +L GR+IRV+ AE++ PRRQF Sbjct: 247 ESLDGVDLNGRAIRVSPAEARPPRRQF 273 Score = 70.9 bits (172), Expect = 5e-10 Identities = 35/83 (42%), Positives = 50/83 (60%) Frame = +3 Query: 183 QVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAISS 362 +++V NL + D + L LF G V +VI+D+ +GRSRGFGFVT SS E+ A Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147 Query: 363 LDGSELKGRSIRVNMAESKPRRQ 431 +G EL GR++RVN +R+ Sbjct: 148 FNGYELDGRALRVNSGPPPEKRE 170 >ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis] gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis] Length = 280 Score = 194 bits (493), Expect = 3e-47 Identities = 97/149 (65%), Positives = 120/149 (80%), Gaps = 5/149 (3%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGASVNGR- 179 SRGFGFVTMS++ EV+AAAQQ NGYELEGR LRVN GPPP++E S S+ R G G Sbjct: 132 SRGFGFVTMSSIDEVEAAAQQFNGYELEGRALRVNSGPPPQRESSFSRSPRFGGGGGGGE 191 Query: 180 ----NQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDAN 347 N++YV NLSW VD+ LE+ FSEQG+V++AKV++DRESGRSRGFGFVTYSS E+ Sbjct: 192 SLEGNRLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEEVE 251 Query: 348 NAISSLDGSELKGRSIRVNMAESKPRRQF 434 NAI SL+G+EL GR+IRV++AE++PRRQF Sbjct: 252 NAIDSLNGAELDGRAIRVSVAEARPRRQF 280 Score = 73.6 bits (179), Expect = 8e-11 Identities = 39/94 (41%), Positives = 59/94 (62%) Frame = +3 Query: 123 RKEDSPSQGVRTGASVNGRNQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRS 302 ++ED S G + S + + ++V NL + VD + L LF G V +VI+D+ +GRS Sbjct: 75 QEEDVSSDGDESSFSQDLK--LFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRS 132 Query: 303 RGFGFVTYSSVEDANNAISSLDGSELKGRSIRVN 404 RGFGFVT SS+++ A +G EL+GR++RVN Sbjct: 133 RGFGFVTMSSIDEVEAAAQQFNGYELEGRALRVN 166 >sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName: Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia] Length = 279 Score = 192 bits (487), Expect = 2e-46 Identities = 98/153 (64%), Positives = 119/153 (77%), Gaps = 9/153 (5%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPS--------QGVRT 158 SRGFGFVTMS+ +EV+AA QQ NGYEL+GR LRVN GPPP K ++ S G R Sbjct: 127 SRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRG 186 Query: 159 GASVNGRNQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVE 338 G S + N+VYV NL+WGVD LETLFSEQG+V++AKV++DR+SGRSRGFGFVTYSS E Sbjct: 187 GGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAE 246 Query: 339 DANNAISSLDGSELKGRSIRVNMAESK-PRRQF 434 + NNAI SLDG +L GR+IRV+ AE++ PRRQF Sbjct: 247 EVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 279 Score = 71.2 bits (173), Expect = 4e-10 Identities = 37/96 (38%), Positives = 55/96 (57%) Frame = +3 Query: 144 QGVRTGASVNGRNQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVT 323 +GV + + +++V NL + D + L LF G V +VI+D+ +GRSRGFGFVT Sbjct: 75 EGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVT 134 Query: 324 YSSVEDANNAISSLDGSELKGRSIRVNMAESKPRRQ 431 SS E+ A +G EL GR++RVN +R+ Sbjct: 135 MSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRE 170 >ref|XP_006658862.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like, partial [Oryza brachyantha] Length = 211 Score = 191 bits (485), Expect = 3e-46 Identities = 98/145 (67%), Positives = 112/145 (77%), Gaps = 1/145 (0%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPP-RKEDSPSQGVRTGASVNGR 179 SRGFGFVTMS+ +E AA +Q NGY +GRPLRVN GPPP R E SP G + + Sbjct: 67 SRGFGFVTMSSSEEAGAAVEQFNGYTFQGRPLRVNSGPPPARDEFSPRPPRGGGNNFDSS 126 Query: 180 NQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAIS 359 N+VYV NLSWGVD+S LE LFSEQG VL+AKVI+DRESGRSRGFGFVTY S E+ NAIS Sbjct: 127 NKVYVGNLSWGVDNSTLENLFSEQGNVLDAKVIYDRESGRSRGFGFVTYGSAEEVTNAIS 186 Query: 360 SLDGSELKGRSIRVNMAESKPRRQF 434 +LDG +L GR IRV +AESKPRRQF Sbjct: 187 NLDGVDLDGRQIRVTVAESKPRRQF 211 Score = 76.3 bits (186), Expect = 1e-11 Identities = 37/84 (44%), Positives = 53/84 (63%) Frame = +3 Query: 183 QVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVEDANNAISS 362 +V+V NL + VD + L LF + G V +V++DR++GRSRGFGFVT SS E+A A+ Sbjct: 28 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSSSEEAGAAVEQ 87 Query: 363 LDGSELKGRSIRVNMAESKPRRQF 434 +G +GR +RVN R +F Sbjct: 88 FNGYTFQGRPLRVNSGPPPARDEF 111 >ref|XP_002461076.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor] gi|241924453|gb|EER97597.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor] Length = 268 Score = 191 bits (484), Expect = 3e-46 Identities = 95/151 (62%), Positives = 115/151 (76%), Gaps = 7/151 (4%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGAS----- 167 SRGFGFVTMS+ +E AA +Q NGY +GRPLRVN GPPP +++S + R G Sbjct: 118 SRGFGFVTMSSAEEAGAAVEQFNGYTFQGRPLRVNCGPPPPRDESAPRAPRGGGGGGGGG 177 Query: 168 --VNGRNQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVED 341 V+ N+VYV NL+WGVD+S LE LFSEQG+VL+AKVI+DRESGRSRGFGFVTY + + Sbjct: 178 SFVDSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRESGRSRGFGFVTYGTAAE 237 Query: 342 ANNAISSLDGSELKGRSIRVNMAESKPRRQF 434 NNAIS+LDG +L GR IRV +AESKPRRQF Sbjct: 238 VNNAISNLDGIDLDGRQIRVTVAESKPRRQF 268 Score = 78.2 bits (191), Expect = 3e-12 Identities = 50/149 (33%), Positives = 71/149 (47%), Gaps = 13/149 (8%) Frame = +3 Query: 18 FVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGASVNGRNQ---- 185 F+ +S+ K AA + L PLR P R + + V + G Q Sbjct: 14 FLALSSAKPAAPAASAFLPFRL---PLRAVSAPGRRVFEPVAVAVSSEYETEGAEQEEEG 70 Query: 186 ---------VYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVE 338 ++V NL + VD + L LF + G V +V++DR +GRSRGFGFVT SS E Sbjct: 71 AEEFSEDLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAE 130 Query: 339 DANNAISSLDGSELKGRSIRVNMAESKPR 425 +A A+ +G +GR +RVN PR Sbjct: 131 EAGAAVEQFNGYTFQGRPLRVNCGPPPPR 159 >tpg|DAA63746.1| TPA: hypothetical protein ZEAMMB73_977373 [Zea mays] Length = 267 Score = 190 bits (483), Expect = 4e-46 Identities = 95/151 (62%), Positives = 115/151 (76%), Gaps = 7/151 (4%) Frame = +3 Query: 3 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGAS----- 167 SRGFGFVTMS+ +E AA +Q NGY +GRPLRVN GPPP ++ S + R G Sbjct: 117 SRGFGFVTMSSAEEAGAAVEQFNGYTFQGRPLRVNCGPPPPRDGSAPRAPRGGGGGGGGG 176 Query: 168 --VNGRNQVYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVED 341 V+ N+VYV NL+WGVD+S LE LFSEQG+VL+AKVI+DR+SGRSRGFGFVTY S E+ Sbjct: 177 SFVDSGNKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAEE 236 Query: 342 ANNAISSLDGSELKGRSIRVNMAESKPRRQF 434 NNAIS+LDG +L GR IRV +AESKPRR+F Sbjct: 237 VNNAISNLDGIDLDGRQIRVTVAESKPRREF 267 Score = 77.4 bits (189), Expect = 6e-12 Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 12/148 (8%) Frame = +3 Query: 18 FVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKE--DSPSQGVRTGASVNGRNQ-- 185 F+ +S+ K AA + L PLR P P + + + V + G Q Sbjct: 14 FLALSSPKPAAPAASAFLPFTL---PLRAVSAPAPARRVFEPVAVAVSSEYGTEGAEQQD 70 Query: 186 --------VYVSNLSWGVDDSDLETLFSEQGRVLEAKVIFDRESGRSRGFGFVTYSSVED 341 ++V NL + VD + L LF + G V +V++DR +GRSRGFGFVT SS E+ Sbjct: 71 GEFSEDLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEE 130 Query: 342 ANNAISSLDGSELKGRSIRVNMAESKPR 425 A A+ +G +GR +RVN PR Sbjct: 131 AGAAVEQFNGYTFQGRPLRVNCGPPPPR 158